Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88859.t1 | XP_013469580.1 | 98.6 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 9.20E-114 | 419.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88859.t1 | Q41640 | 92.3 | 208 | 13 | 2 | 1 | 207 | 1 | 206 | 1.9e-107 | 389.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88859.t1 | A0A072VQC0 | 98.6 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 6.7e-114 | 419.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene88859 | 0.813739 | 2.20E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene88859 | 0.849943 | 2.34E-60 | -1.69E-46 |
| MS.gene050114 | MS.gene88859 | 0.819177 | 1.33E-52 | -1.69E-46 |
| MS.gene050277 | MS.gene88859 | 0.834637 | 2.67E-56 | -1.69E-46 |
| MS.gene050320 | MS.gene88859 | 0.828242 | 1.00E-54 | -1.69E-46 |
| MS.gene050752 | MS.gene88859 | 0.822822 | 1.93E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene88859 | 0.914743 | 1.34E-84 | -1.69E-46 |
| MS.gene051003 | MS.gene88859 | 0.843362 | 1.47E-58 | -1.69E-46 |
| MS.gene051063 | MS.gene88859 | 0.829727 | 4.38E-55 | -1.69E-46 |
| MS.gene051233 | MS.gene88859 | 0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene88859 | 0.83887 | 2.22E-57 | -1.69E-46 |
| MS.gene051245 | MS.gene88859 | 0.815745 | 7.90E-52 | -1.69E-46 |
| MS.gene051328 | MS.gene88859 | 0.812775 | 3.58E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene88859 | 0.859868 | 3.07E-63 | -1.69E-46 |
| MS.gene051748 | MS.gene88859 | 0.870782 | 1.12E-66 | -1.69E-46 |
| MS.gene051756 | MS.gene88859 | 0.819985 | 8.71E-53 | -1.69E-46 |
| MS.gene051850 | MS.gene88859 | 0.880607 | 4.78E-70 | -1.69E-46 |
| MS.gene051885 | MS.gene88859 | 0.831574 | 1.55E-55 | -1.69E-46 |
| MS.gene051903 | MS.gene88859 | 0.868708 | 5.34E-66 | -1.69E-46 |
| MS.gene052133 | MS.gene88859 | 0.815981 | 6.99E-52 | -1.69E-46 |
| MS.gene052335 | MS.gene88859 | 0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene88859 | 0.804666 | 1.94E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene88859 | 0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene052818 | MS.gene88859 | -0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene88859 | 0.863972 | 1.70E-64 | -1.69E-46 |
| MS.gene053058 | MS.gene88859 | 0.819416 | 1.17E-52 | -1.69E-46 |
| MS.gene053109 | MS.gene88859 | 0.832212 | 1.07E-55 | -1.69E-46 |
| MS.gene053581 | MS.gene88859 | 0.801509 | 8.71E-49 | -1.69E-46 |
| MS.gene053677 | MS.gene88859 | 0.807658 | 4.54E-50 | -1.69E-46 |
| MS.gene053786 | MS.gene88859 | 0.802544 | 5.33E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene88859 | 0.820806 | 5.65E-53 | -1.69E-46 |
| MS.gene054250 | MS.gene88859 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene88859 | 0.821396 | 4.13E-53 | -1.69E-46 |
| MS.gene055174 | MS.gene88859 | 0.832095 | 1.15E-55 | -1.69E-46 |
| MS.gene055424 | MS.gene88859 | 0.856298 | 3.54E-62 | -1.69E-46 |
| MS.gene055468 | MS.gene88859 | 0.813088 | 3.05E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene88859 | -0.800743 | 1.25E-48 | -1.69E-46 |
| MS.gene056043 | MS.gene88859 | -0.834164 | 3.51E-56 | -1.69E-46 |
| MS.gene056075 | MS.gene88859 | 0.835583 | 1.54E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene88859 | 0.820033 | 8.49E-53 | -1.69E-46 |
| MS.gene056432 | MS.gene88859 | 0.840978 | 6.28E-58 | -1.69E-46 |
| MS.gene056580 | MS.gene88859 | 0.82553 | 4.46E-54 | -1.69E-46 |
| MS.gene056631 | MS.gene88859 | 0.812014 | 5.25E-51 | -1.69E-46 |
| MS.gene056752 | MS.gene88859 | 0.855252 | 7.14E-62 | -1.69E-46 |
| MS.gene056992 | MS.gene88859 | 0.814066 | 1.86E-51 | -1.69E-46 |
| MS.gene057057 | MS.gene88859 | 0.845318 | 4.38E-59 | -1.69E-46 |
| MS.gene057094 | MS.gene88859 | 0.873211 | 1.75E-67 | -1.69E-46 |
| MS.gene057234 | MS.gene88859 | 0.862405 | 5.19E-64 | -1.69E-46 |
| MS.gene057452 | MS.gene88859 | -0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene05769 | MS.gene88859 | 0.832038 | 1.19E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene88859 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene05781 | MS.gene88859 | 0.821119 | 4.78E-53 | -1.69E-46 |
| MS.gene057999 | MS.gene88859 | 0.807039 | 6.14E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene88859 | 0.831831 | 1.34E-55 | -1.69E-46 |
| MS.gene058055 | MS.gene88859 | 0.849375 | 3.37E-60 | -1.69E-46 |
| MS.gene058074 | MS.gene88859 | 0.83011 | 3.53E-55 | -1.69E-46 |
| MS.gene058238 | MS.gene88859 | 0.824911 | 6.24E-54 | -1.69E-46 |
| MS.gene058646 | MS.gene88859 | 0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene88859 | 0.827075 | 1.91E-54 | -1.69E-46 |
| MS.gene05880 | MS.gene88859 | 0.848431 | 6.16E-60 | -1.69E-46 |
| MS.gene058852 | MS.gene88859 | 0.805505 | 1.29E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene88859 | 0.828819 | 7.27E-55 | -1.69E-46 |
| MS.gene059171 | MS.gene88859 | 0.840297 | 9.46E-58 | -1.69E-46 |
| MS.gene059227 | MS.gene88859 | 0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene88859 | 0.861056 | 1.34E-63 | -1.69E-46 |
| MS.gene06011 | MS.gene88859 | 0.812426 | 4.27E-51 | -1.69E-46 |
| MS.gene060463 | MS.gene88859 | 0.801768 | 7.70E-49 | -1.69E-46 |
| MS.gene060465 | MS.gene88859 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene060563 | MS.gene88859 | 0.825202 | 5.33E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene88859 | 0.818374 | 2.03E-52 | -1.69E-46 |
| MS.gene060869 | MS.gene88859 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene88859 | 0.818216 | 2.20E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88859.t1 | MTR_1g097420 | 98.551 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 2.04e-154 | 426 |
| MS.gene88859.t1 | MTR_1g097420 | 87.179 | 234 | 3 | 1 | 1 | 207 | 1 | 234 | 2.88e-148 | 411 |
| MS.gene88859.t1 | MTR_8g092020 | 73.301 | 206 | 53 | 1 | 2 | 207 | 6 | 209 | 2.17e-113 | 322 |
| MS.gene88859.t1 | MTR_4g012940 | 72.464 | 207 | 57 | 0 | 1 | 207 | 1 | 207 | 2.07e-110 | 315 |
| MS.gene88859.t1 | MTR_2g101890 | 74.129 | 201 | 45 | 1 | 4 | 204 | 6 | 199 | 5.15e-110 | 313 |
| MS.gene88859.t1 | MTR_4g069850 | 71.770 | 209 | 54 | 2 | 1 | 207 | 1 | 206 | 3.29e-107 | 306 |
| MS.gene88859.t1 | MTR_6g039490 | 72.464 | 207 | 55 | 1 | 1 | 207 | 1 | 205 | 3.72e-104 | 300 |
| MS.gene88859.t1 | MTR_1452s0010 | 84.211 | 95 | 15 | 0 | 28 | 122 | 1 | 95 | 5.14e-56 | 173 |
| MS.gene88859.t1 | MTR_1663s0010 | 85.333 | 75 | 11 | 0 | 110 | 184 | 1 | 75 | 1.47e-41 | 135 |
| MS.gene88859.t1 | MTR_1686s0010 | 69.880 | 83 | 25 | 0 | 28 | 110 | 1 | 83 | 2.48e-40 | 133 |
| MS.gene88859.t1 | MTR_8g036220 | 41.104 | 163 | 89 | 3 | 8 | 170 | 16 | 171 | 3.46e-37 | 129 |
| MS.gene88859.t1 | MTR_2g005510 | 39.773 | 176 | 92 | 4 | 1 | 169 | 1 | 169 | 6.05e-37 | 128 |
| MS.gene88859.t1 | MTR_1g052475 | 41.818 | 165 | 89 | 3 | 8 | 172 | 15 | 172 | 3.58e-36 | 126 |
| MS.gene88859.t1 | MTR_4g079350 | 35.204 | 196 | 120 | 3 | 8 | 203 | 13 | 201 | 4.27e-36 | 126 |
| MS.gene88859.t1 | MTR_7g405790 | 39.535 | 172 | 97 | 3 | 8 | 179 | 15 | 179 | 9.39e-36 | 125 |
| MS.gene88859.t1 | MTR_2g096550 | 39.521 | 167 | 96 | 3 | 8 | 174 | 15 | 176 | 1.18e-35 | 125 |
| MS.gene88859.t1 | MTR_4g088090 | 38.889 | 162 | 92 | 3 | 8 | 169 | 13 | 167 | 1.66e-35 | 124 |
| MS.gene88859.t1 | MTR_4g098950 | 33.498 | 203 | 123 | 3 | 10 | 207 | 11 | 206 | 1.84e-35 | 124 |
| MS.gene88859.t1 | MTR_8g090215 | 35.784 | 204 | 118 | 5 | 10 | 207 | 11 | 207 | 3.77e-35 | 123 |
| MS.gene88859.t1 | MTR_1g068730 | 36.181 | 199 | 119 | 4 | 8 | 206 | 15 | 205 | 3.81e-35 | 124 |
| MS.gene88859.t1 | MTR_4g064897 | 34.135 | 208 | 120 | 5 | 8 | 205 | 12 | 212 | 6.02e-35 | 123 |
| MS.gene88859.t1 | MTR_8g089985 | 38.788 | 165 | 94 | 3 | 8 | 172 | 17 | 174 | 6.85e-35 | 123 |
| MS.gene88859.t1 | MTR_1g115325 | 35.644 | 202 | 120 | 5 | 8 | 207 | 15 | 208 | 8.05e-35 | 123 |
| MS.gene88859.t1 | MTR_2g014990 | 38.889 | 162 | 92 | 3 | 8 | 169 | 13 | 167 | 1.01e-34 | 122 |
| MS.gene88859.t1 | MTR_0262s0050 | 37.264 | 212 | 113 | 6 | 8 | 207 | 15 | 218 | 1.01e-34 | 122 |
| MS.gene88859.t1 | MTR_2g090865 | 40.361 | 166 | 90 | 4 | 8 | 172 | 11 | 168 | 1.12e-34 | 122 |
| MS.gene88859.t1 | MTR_1g068740 | 35.678 | 199 | 120 | 4 | 8 | 206 | 15 | 205 | 1.70e-34 | 122 |
| MS.gene88859.t1 | MTR_5g013900 | 33.333 | 204 | 123 | 4 | 10 | 207 | 11 | 207 | 2.00e-34 | 121 |
| MS.gene88859.t1 | MTR_3g086980 | 38.788 | 165 | 94 | 3 | 8 | 172 | 16 | 173 | 3.18e-34 | 121 |
| MS.gene88859.t1 | MTR_3g087160 | 33.990 | 203 | 122 | 3 | 10 | 207 | 11 | 206 | 4.35e-34 | 120 |
| MS.gene88859.t1 | MTR_8g103550 | 38.462 | 182 | 103 | 5 | 10 | 189 | 11 | 185 | 5.59e-34 | 120 |
| MS.gene88859.t1 | MTR_3g069510 | 36.970 | 165 | 97 | 3 | 8 | 172 | 12 | 169 | 7.31e-34 | 120 |
| MS.gene88859.t1 | MTR_2g075950 | 39.506 | 162 | 91 | 4 | 8 | 169 | 13 | 167 | 7.91e-34 | 120 |
| MS.gene88859.t1 | MTR_6g021790 | 38.372 | 172 | 99 | 3 | 8 | 179 | 6 | 170 | 8.67e-34 | 120 |
| MS.gene88859.t1 | MTR_2g005500 | 36.747 | 166 | 98 | 3 | 8 | 173 | 9 | 167 | 9.51e-34 | 119 |
| MS.gene88859.t1 | MTR_7g100020 | 38.922 | 167 | 96 | 3 | 8 | 174 | 15 | 175 | 1.21e-33 | 120 |
| MS.gene88859.t1 | MTR_8g006970 | 37.952 | 166 | 96 | 3 | 8 | 173 | 8 | 166 | 2.62e-33 | 118 |
| MS.gene88859.t1 | MTR_8g006970 | 37.952 | 166 | 96 | 3 | 8 | 173 | 22 | 180 | 5.01e-33 | 118 |
| MS.gene88859.t1 | MTR_7g081700 | 37.500 | 168 | 98 | 3 | 8 | 175 | 8 | 168 | 6.55e-33 | 117 |
| MS.gene88859.t1 | MTR_7g051940 | 37.209 | 172 | 101 | 3 | 8 | 179 | 13 | 177 | 6.64e-33 | 118 |
| MS.gene88859.t1 | MTR_5g076590 | 38.788 | 165 | 94 | 3 | 10 | 174 | 12 | 169 | 1.18e-32 | 117 |
| MS.gene88859.t1 | MTR_8g031680 | 37.427 | 171 | 100 | 3 | 9 | 179 | 7 | 170 | 1.19e-32 | 117 |
| MS.gene88859.t1 | MTR_3g064390 | 38.788 | 165 | 94 | 3 | 10 | 174 | 12 | 169 | 5.04e-32 | 115 |
| MS.gene88859.t1 | MTR_2g027660 | 34.123 | 211 | 119 | 6 | 8 | 205 | 6 | 209 | 6.84e-32 | 115 |
| MS.gene88859.t1 | MTR_2g083860 | 37.037 | 162 | 95 | 3 | 8 | 169 | 13 | 167 | 1.80e-31 | 114 |
| MS.gene88859.t1 | MTR_8g031870 | 34.884 | 172 | 105 | 3 | 3 | 174 | 1 | 165 | 3.68e-31 | 112 |
| MS.gene88859.t1 | MTR_1g078200 | 36.527 | 167 | 99 | 2 | 8 | 174 | 14 | 173 | 1.07e-30 | 112 |
| MS.gene88859.t1 | MTR_1812s0010 | 66.667 | 72 | 24 | 0 | 112 | 183 | 3 | 74 | 1.94e-30 | 107 |
| MS.gene88859.t1 | MTR_4g063160 | 34.848 | 198 | 119 | 5 | 8 | 203 | 15 | 204 | 1.96e-30 | 111 |
| MS.gene88859.t1 | MTR_6g079550 | 36.810 | 163 | 96 | 3 | 8 | 170 | 12 | 167 | 4.38e-30 | 110 |
| MS.gene88859.t1 | MTR_8g027220 | 36.810 | 163 | 96 | 3 | 8 | 170 | 26 | 181 | 1.15e-29 | 110 |
| MS.gene88859.t1 | MTR_8g107070 | 35.484 | 186 | 111 | 4 | 8 | 191 | 14 | 192 | 4.68e-29 | 109 |
| MS.gene88859.t1 | MTR_8g031660 | 34.270 | 178 | 110 | 3 | 8 | 185 | 6 | 176 | 5.15e-29 | 107 |
| MS.gene88859.t1 | MTR_7g117910 | 37.838 | 148 | 84 | 3 | 8 | 155 | 20 | 159 | 1.82e-28 | 106 |
| MS.gene88859.t1 | MTR_1g094220 | 37.126 | 167 | 97 | 4 | 9 | 174 | 32 | 191 | 2.07e-28 | 105 |
| MS.gene88859.t1 | MTR_8g031830 | 32.323 | 198 | 124 | 5 | 3 | 200 | 1 | 188 | 1.44e-27 | 103 |
| MS.gene88859.t1 | MTR_1g094220 | 36.420 | 162 | 95 | 4 | 9 | 169 | 32 | 186 | 3.71e-27 | 102 |
| MS.gene88859.t1 | MTR_1g094220 | 36.420 | 162 | 95 | 4 | 9 | 169 | 32 | 186 | 5.68e-27 | 102 |
| MS.gene88859.t1 | MTR_1g068730 | 39.837 | 123 | 70 | 1 | 8 | 130 | 15 | 133 | 1.09e-26 | 100 |
| MS.gene88859.t1 | MTR_1g094220 | 36.420 | 162 | 95 | 4 | 9 | 169 | 32 | 186 | 1.17e-26 | 102 |
| MS.gene88859.t1 | MTR_1g068740 | 39.837 | 123 | 70 | 1 | 8 | 130 | 15 | 133 | 1.32e-26 | 101 |
| MS.gene88859.t1 | MTR_4g099470 | 39.416 | 137 | 76 | 3 | 37 | 173 | 13 | 142 | 1.86e-26 | 100 |
| MS.gene88859.t1 | MTR_3g064390 | 40.496 | 121 | 68 | 1 | 10 | 130 | 12 | 128 | 4.35e-26 | 99.0 |
| MS.gene88859.t1 | MTR_8g093740 | 33.005 | 203 | 124 | 6 | 8 | 205 | 13 | 208 | 5.96e-26 | 99.8 |
| MS.gene88859.t1 | MTR_2g102060 | 33.939 | 165 | 102 | 3 | 10 | 174 | 12 | 169 | 9.06e-26 | 99.4 |
| MS.gene88859.t1 | MTR_3g096350 | 37.423 | 163 | 94 | 5 | 8 | 169 | 12 | 167 | 6.92e-25 | 97.1 |
| MS.gene88859.t1 | MTR_7g103070 | 36.420 | 162 | 94 | 5 | 10 | 169 | 18 | 172 | 8.55e-25 | 97.1 |
| MS.gene88859.t1 | MTR_1g029450 | 36.810 | 163 | 95 | 5 | 8 | 169 | 17 | 172 | 1.25e-24 | 96.7 |
| MS.gene88859.t1 | MTR_3g107717 | 26.702 | 191 | 127 | 4 | 9 | 199 | 14 | 191 | 4.19e-23 | 92.8 |
| MS.gene88859.t1 | MTR_3g107713 | 26.702 | 191 | 127 | 4 | 9 | 199 | 14 | 191 | 4.42e-23 | 92.8 |
| MS.gene88859.t1 | MTR_3g107707 | 26.702 | 191 | 127 | 4 | 9 | 199 | 14 | 191 | 4.46e-23 | 92.8 |
| MS.gene88859.t1 | MTR_1g090717 | 38.037 | 163 | 93 | 5 | 9 | 169 | 16 | 172 | 9.53e-23 | 91.7 |
| MS.gene88859.t1 | MTR_1g062760 | 33.168 | 202 | 123 | 6 | 9 | 205 | 15 | 209 | 9.83e-23 | 91.7 |
| MS.gene88859.t1 | MTR_5g036990 | 61.429 | 70 | 26 | 1 | 39 | 107 | 32 | 101 | 1.10e-21 | 86.3 |
| MS.gene88859.t1 | MTR_3g096350 | 39.344 | 122 | 69 | 3 | 8 | 128 | 12 | 129 | 5.10e-21 | 85.5 |
| MS.gene88859.t1 | MTR_3g096350 | 39.344 | 122 | 69 | 3 | 8 | 128 | 12 | 129 | 8.25e-21 | 85.1 |
| MS.gene88859.t1 | MTR_6g087980 | 30.481 | 187 | 115 | 5 | 8 | 185 | 6 | 186 | 2.22e-20 | 85.1 |
| MS.gene88859.t1 | MTR_8g093740 | 32.558 | 172 | 105 | 5 | 39 | 205 | 10 | 175 | 3.52e-19 | 81.3 |
| MS.gene88859.t1 | MTR_2g093510 | 73.077 | 52 | 14 | 0 | 134 | 185 | 776 | 827 | 3.15e-18 | 82.8 |
| MS.gene88859.t1 | MTR_4g113620 | 25.134 | 187 | 118 | 5 | 9 | 195 | 14 | 178 | 9.23e-18 | 78.6 |
| MS.gene88859.t1 | MTR_5g022600 | 32.022 | 178 | 104 | 7 | 1 | 169 | 1 | 170 | 1.19e-17 | 77.8 |
| MS.gene88859.t1 | MTR_2g090875 | 30.108 | 186 | 113 | 6 | 1 | 177 | 1 | 178 | 1.38e-17 | 77.4 |
| MS.gene88859.t1 | MTR_8g075240 | 32.584 | 178 | 103 | 7 | 1 | 169 | 1 | 170 | 2.72e-17 | 76.6 |
| MS.gene88859.t1 | MTR_4g088055 | 30.108 | 186 | 113 | 6 | 1 | 177 | 1 | 178 | 3.22e-17 | 76.6 |
| MS.gene88859.t1 | MTR_4g073250 | 28.272 | 191 | 122 | 5 | 8 | 189 | 6 | 190 | 4.39e-17 | 76.3 |
| MS.gene88859.t1 | MTR_3g078260 | 28.108 | 185 | 118 | 5 | 8 | 183 | 8 | 186 | 2.96e-15 | 71.6 |
| MS.gene88859.t1 | MTR_7g103070 | 36.066 | 122 | 69 | 5 | 50 | 169 | 2 | 116 | 4.12e-14 | 67.4 |
| MS.gene88859.t1 | MTR_3g078260 | 32.031 | 128 | 80 | 4 | 1 | 127 | 1 | 122 | 9.55e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88859.t1 | AT4G09720 | 82.126 | 207 | 36 | 1 | 1 | 207 | 1 | 206 | 9.36e-128 | 358 |
| MS.gene88859.t1 | AT1G22740 | 82.126 | 207 | 33 | 1 | 1 | 207 | 1 | 203 | 1.10e-124 | 350 |
| MS.gene88859.t1 | AT4G09720 | 80.189 | 212 | 36 | 2 | 1 | 207 | 1 | 211 | 3.81e-124 | 349 |
| MS.gene88859.t1 | AT4G09720 | 77.982 | 218 | 36 | 2 | 1 | 207 | 1 | 217 | 4.41e-124 | 350 |
| MS.gene88859.t1 | AT1G52280 | 72.727 | 209 | 52 | 2 | 1 | 207 | 1 | 206 | 1.69e-109 | 312 |
| MS.gene88859.t1 | AT3G16100 | 71.292 | 209 | 55 | 2 | 1 | 207 | 1 | 206 | 4.16e-108 | 309 |
| MS.gene88859.t1 | AT3G18820 | 70.813 | 209 | 56 | 2 | 1 | 207 | 1 | 206 | 1.11e-105 | 303 |
| MS.gene88859.t1 | AT2G21880 | 69.811 | 212 | 56 | 3 | 2 | 207 | 3 | 212 | 3.39e-105 | 301 |
| MS.gene88859.t1 | AT4G09720 | 81.395 | 172 | 31 | 1 | 36 | 207 | 2 | 172 | 3.98e-104 | 297 |
| MS.gene88859.t1 | AT4G09720 | 81.395 | 172 | 31 | 1 | 36 | 207 | 2 | 172 | 3.98e-104 | 297 |
| MS.gene88859.t1 | AT4G09720 | 81.395 | 172 | 31 | 1 | 36 | 207 | 2 | 172 | 3.98e-104 | 297 |
| MS.gene88859.t1 | AT1G49300 | 67.943 | 209 | 62 | 2 | 1 | 207 | 1 | 206 | 7.42e-102 | 293 |
| MS.gene88859.t1 | AT1G49300 | 67.943 | 209 | 62 | 2 | 1 | 207 | 1 | 206 | 7.42e-102 | 293 |
| MS.gene88859.t1 | AT2G21880 | 66.038 | 212 | 56 | 4 | 2 | 207 | 3 | 204 | 1.69e-95 | 277 |
| MS.gene88859.t1 | AT2G21880 | 67.725 | 189 | 53 | 3 | 25 | 207 | 1 | 187 | 9.63e-91 | 264 |
| MS.gene88859.t1 | AT2G21880 | 67.725 | 189 | 53 | 3 | 25 | 207 | 1 | 187 | 9.63e-91 | 264 |
| MS.gene88859.t1 | AT5G39620 | 55.122 | 205 | 86 | 2 | 6 | 207 | 3 | 204 | 1.33e-76 | 229 |
| MS.gene88859.t1 | AT3G12160 | 37.736 | 212 | 113 | 5 | 8 | 207 | 15 | 219 | 5.85e-39 | 134 |
| MS.gene88859.t1 | AT5G47960 | 36.792 | 212 | 113 | 6 | 8 | 205 | 15 | 219 | 3.16e-37 | 129 |
| MS.gene88859.t1 | AT2G33870 | 40.741 | 162 | 89 | 4 | 8 | 169 | 13 | 167 | 1.41e-36 | 127 |
| MS.gene88859.t1 | AT1G28550 | 40.741 | 162 | 89 | 3 | 8 | 169 | 13 | 167 | 4.90e-36 | 126 |
| MS.gene88859.t1 | AT5G59840 | 35.678 | 199 | 122 | 3 | 8 | 206 | 15 | 207 | 7.87e-36 | 125 |
| MS.gene88859.t1 | AT5G60860 | 39.506 | 162 | 91 | 3 | 8 | 169 | 13 | 167 | 1.22e-35 | 125 |
| MS.gene88859.t1 | AT1G09630 | 39.394 | 165 | 93 | 3 | 8 | 172 | 12 | 169 | 1.26e-35 | 125 |
| MS.gene88859.t1 | AT5G45750 | 39.506 | 162 | 91 | 3 | 8 | 169 | 13 | 167 | 1.67e-35 | 124 |
| MS.gene88859.t1 | AT3G15060 | 40.123 | 162 | 90 | 3 | 8 | 169 | 13 | 167 | 2.69e-35 | 124 |
| MS.gene88859.t1 | AT3G53610 | 35.176 | 199 | 121 | 4 | 8 | 206 | 15 | 205 | 3.58e-35 | 124 |
| MS.gene88859.t1 | AT3G53610 | 35.176 | 199 | 121 | 4 | 8 | 206 | 15 | 205 | 3.58e-35 | 124 |
| MS.gene88859.t1 | AT3G53610 | 35.176 | 199 | 121 | 4 | 8 | 206 | 15 | 205 | 3.58e-35 | 124 |
| MS.gene88859.t1 | AT2G44610 | 34.146 | 205 | 121 | 4 | 10 | 207 | 11 | 208 | 4.01e-35 | 123 |
| MS.gene88859.t1 | AT3G46060 | 34.673 | 199 | 124 | 3 | 8 | 206 | 15 | 207 | 9.84e-35 | 122 |
| MS.gene88859.t1 | AT3G46060 | 34.673 | 199 | 124 | 3 | 8 | 206 | 15 | 207 | 9.84e-35 | 122 |
| MS.gene88859.t1 | AT3G46060 | 34.673 | 199 | 124 | 3 | 8 | 206 | 15 | 207 | 9.84e-35 | 122 |
| MS.gene88859.t1 | AT5G59150 | 36.364 | 165 | 98 | 3 | 8 | 172 | 12 | 169 | 3.29e-34 | 121 |
| MS.gene88859.t1 | AT1G05810 | 39.157 | 166 | 94 | 3 | 4 | 169 | 8 | 166 | 5.42e-34 | 120 |
| MS.gene88859.t1 | AT3G11730 | 38.150 | 173 | 100 | 3 | 1 | 173 | 1 | 166 | 1.07e-33 | 119 |
| MS.gene88859.t1 | AT1G05810 | 39.157 | 166 | 94 | 3 | 4 | 169 | 54 | 212 | 1.36e-33 | 121 |
| MS.gene88859.t1 | AT1G07410 | 32.850 | 207 | 123 | 5 | 8 | 205 | 12 | 211 | 1.43e-33 | 119 |
| MS.gene88859.t1 | AT4G17530 | 36.932 | 176 | 101 | 4 | 8 | 180 | 8 | 176 | 1.68e-33 | 119 |
| MS.gene88859.t1 | AT2G31680 | 36.047 | 172 | 103 | 3 | 8 | 179 | 12 | 176 | 1.71e-33 | 119 |
| MS.gene88859.t1 | AT4G18800 | 37.654 | 162 | 94 | 3 | 8 | 169 | 13 | 167 | 1.89e-33 | 119 |
| MS.gene88859.t1 | AT1G16920 | 38.272 | 162 | 93 | 3 | 8 | 169 | 13 | 167 | 2.44e-33 | 119 |
| MS.gene88859.t1 | AT5G47200 | 36.932 | 176 | 101 | 4 | 8 | 180 | 8 | 176 | 2.87e-33 | 118 |
| MS.gene88859.t1 | AT1G18200 | 38.182 | 165 | 95 | 4 | 8 | 172 | 13 | 170 | 3.21e-33 | 119 |
| MS.gene88859.t1 | AT2G43130 | 36.628 | 172 | 102 | 3 | 8 | 179 | 12 | 176 | 5.18e-33 | 118 |
| MS.gene88859.t1 | AT5G65270 | 38.182 | 165 | 95 | 3 | 8 | 172 | 17 | 174 | 8.42e-33 | 118 |
| MS.gene88859.t1 | AT4G35860 | 36.047 | 172 | 103 | 3 | 8 | 179 | 6 | 170 | 8.47e-33 | 117 |
| MS.gene88859.t1 | AT1G73640 | 37.576 | 165 | 96 | 3 | 8 | 172 | 13 | 170 | 1.27e-32 | 117 |
| MS.gene88859.t1 | AT3G46830 | 35.758 | 165 | 99 | 3 | 8 | 172 | 12 | 169 | 1.35e-32 | 117 |
| MS.gene88859.t1 | AT3G46830 | 35.758 | 165 | 99 | 3 | 8 | 172 | 12 | 169 | 1.35e-32 | 117 |
| MS.gene88859.t1 | AT4G18430 | 30.890 | 191 | 125 | 3 | 8 | 198 | 13 | 196 | 1.38e-32 | 117 |
| MS.gene88859.t1 | AT5G10260 | 33.010 | 206 | 121 | 5 | 10 | 207 | 11 | 207 | 2.77e-32 | 116 |
| MS.gene88859.t1 | AT4G17170 | 34.597 | 211 | 118 | 6 | 8 | 205 | 6 | 209 | 4.10e-32 | 115 |
| MS.gene88859.t1 | AT1G02130 | 33.846 | 195 | 113 | 4 | 8 | 193 | 8 | 195 | 8.49e-32 | 114 |
| MS.gene88859.t1 | AT3G09900 | 36.979 | 192 | 113 | 4 | 8 | 199 | 15 | 198 | 1.16e-31 | 115 |
| MS.gene88859.t1 | AT4G39990 | 37.037 | 162 | 95 | 3 | 8 | 169 | 17 | 171 | 1.46e-31 | 114 |
| MS.gene88859.t1 | AT4G39890 | 36.970 | 165 | 98 | 3 | 9 | 173 | 10 | 168 | 1.60e-31 | 114 |
| MS.gene88859.t1 | AT5G03520 | 36.458 | 192 | 114 | 4 | 8 | 199 | 15 | 198 | 4.36e-31 | 113 |
| MS.gene88859.t1 | AT2G22290 | 33.333 | 204 | 123 | 5 | 10 | 207 | 11 | 207 | 5.01e-31 | 113 |
| MS.gene88859.t1 | AT1G01200 | 38.037 | 163 | 95 | 3 | 8 | 170 | 28 | 184 | 6.87e-31 | 113 |
| MS.gene88859.t1 | AT1G06400 | 36.420 | 162 | 96 | 2 | 8 | 169 | 13 | 167 | 1.09e-30 | 112 |
| MS.gene88859.t1 | AT3G07410 | 36.047 | 172 | 103 | 2 | 8 | 179 | 12 | 176 | 1.55e-30 | 112 |
| MS.gene88859.t1 | AT4G17160 | 36.527 | 167 | 99 | 3 | 9 | 175 | 7 | 166 | 1.90e-30 | 111 |
| MS.gene88859.t1 | AT5G45130 | 38.182 | 165 | 95 | 3 | 10 | 174 | 12 | 169 | 2.03e-30 | 111 |
| MS.gene88859.t1 | AT4G19640 | 37.576 | 165 | 96 | 3 | 10 | 174 | 12 | 169 | 7.17e-30 | 109 |
| MS.gene88859.t1 | AT5G64990 | 38.286 | 175 | 93 | 4 | 10 | 180 | 9 | 172 | 7.57e-30 | 110 |
| MS.gene88859.t1 | AT5G45130 | 38.037 | 163 | 94 | 3 | 12 | 174 | 22 | 177 | 1.66e-29 | 108 |
| MS.gene88859.t1 | AT5G47520 | 35.928 | 167 | 100 | 3 | 8 | 174 | 14 | 173 | 3.04e-29 | 108 |
| MS.gene88859.t1 | AT5G64990 | 36.813 | 182 | 93 | 5 | 10 | 180 | 9 | 179 | 3.57e-27 | 103 |
| MS.gene88859.t1 | AT1G43890 | 39.264 | 163 | 91 | 5 | 8 | 169 | 13 | 168 | 1.02e-26 | 102 |
| MS.gene88859.t1 | AT1G43890 | 39.264 | 163 | 91 | 5 | 8 | 169 | 13 | 168 | 1.02e-26 | 102 |
| MS.gene88859.t1 | AT1G43890 | 39.264 | 163 | 91 | 5 | 8 | 169 | 13 | 168 | 1.02e-26 | 102 |
| MS.gene88859.t1 | AT3G54840 | 35.366 | 164 | 98 | 4 | 9 | 171 | 34 | 190 | 1.31e-26 | 101 |
| MS.gene88859.t1 | AT3G54840 | 35.329 | 167 | 100 | 4 | 9 | 174 | 34 | 193 | 3.78e-26 | 100 |
| MS.gene88859.t1 | AT4G19640 | 37.956 | 137 | 80 | 2 | 10 | 146 | 12 | 143 | 7.44e-26 | 97.8 |
| MS.gene88859.t1 | AT3G54840 | 35.152 | 165 | 99 | 4 | 11 | 174 | 2 | 159 | 8.24e-26 | 98.6 |
| MS.gene88859.t1 | AT4G19640 | 40.000 | 120 | 68 | 1 | 10 | 129 | 12 | 127 | 6.40e-25 | 96.7 |
| MS.gene88859.t1 | AT5G03530 | 33.498 | 203 | 121 | 7 | 9 | 205 | 14 | 208 | 1.85e-24 | 95.9 |
| MS.gene88859.t1 | AT5G03530 | 33.498 | 203 | 121 | 7 | 9 | 205 | 14 | 208 | 1.85e-24 | 95.9 |
| MS.gene88859.t1 | AT5G03520 | 39.695 | 131 | 73 | 2 | 44 | 174 | 41 | 165 | 2.58e-24 | 95.5 |
| MS.gene88859.t1 | AT5G20010 | 27.273 | 187 | 123 | 4 | 9 | 195 | 14 | 187 | 6.93e-24 | 94.7 |
| MS.gene88859.t1 | AT5G20020 | 27.273 | 187 | 123 | 4 | 9 | 195 | 14 | 187 | 1.00e-23 | 94.4 |
| MS.gene88859.t1 | AT5G55190 | 26.702 | 191 | 127 | 4 | 9 | 199 | 14 | 191 | 5.77e-23 | 92.4 |
| MS.gene88859.t1 | AT4G35860 | 36.154 | 130 | 76 | 3 | 50 | 179 | 2 | 124 | 2.88e-22 | 89.4 |
| MS.gene88859.t1 | AT4G28950 | 31.351 | 185 | 114 | 6 | 8 | 185 | 6 | 184 | 2.48e-21 | 87.8 |
| MS.gene88859.t1 | AT5G55080 | 25.946 | 185 | 124 | 4 | 9 | 193 | 14 | 185 | 6.13e-21 | 87.0 |
| MS.gene88859.t1 | AT5G59150 | 34.146 | 123 | 74 | 3 | 50 | 172 | 3 | 118 | 5.32e-19 | 80.5 |
| MS.gene88859.t1 | AT5G45970 | 29.609 | 179 | 111 | 5 | 8 | 177 | 6 | 178 | 8.63e-18 | 78.2 |
| MS.gene88859.t1 | AT3G09910 | 33.735 | 166 | 94 | 6 | 9 | 169 | 14 | 168 | 1.00e-17 | 78.2 |
| MS.gene88859.t1 | AT3G09910 | 33.735 | 166 | 94 | 6 | 9 | 169 | 14 | 168 | 1.00e-17 | 78.2 |
| MS.gene88859.t1 | AT3G09910 | 33.735 | 166 | 94 | 6 | 9 | 169 | 14 | 168 | 1.00e-17 | 78.2 |
| MS.gene88859.t1 | AT1G20090 | 30.168 | 179 | 110 | 5 | 8 | 177 | 5 | 177 | 2.27e-17 | 77.0 |
| MS.gene88859.t1 | AT3G09910 | 33.333 | 162 | 100 | 5 | 9 | 169 | 14 | 168 | 2.32e-17 | 77.0 |
| MS.gene88859.t1 | AT3G09910 | 33.333 | 162 | 100 | 5 | 9 | 169 | 14 | 168 | 2.32e-17 | 77.0 |
| MS.gene88859.t1 | AT1G75840 | 30.645 | 186 | 112 | 6 | 1 | 177 | 1 | 178 | 2.41e-17 | 77.0 |
| MS.gene88859.t1 | AT4G35020 | 30.645 | 186 | 112 | 6 | 1 | 177 | 1 | 178 | 4.59e-17 | 76.3 |
| MS.gene88859.t1 | AT4G35020 | 30.645 | 186 | 112 | 6 | 1 | 177 | 1 | 178 | 4.59e-17 | 76.3 |
| MS.gene88859.t1 | AT4G35020 | 30.645 | 186 | 112 | 6 | 1 | 177 | 1 | 178 | 4.59e-17 | 76.3 |
| MS.gene88859.t1 | AT3G51300 | 30.899 | 178 | 106 | 6 | 1 | 169 | 1 | 170 | 7.57e-17 | 75.9 |
| MS.gene88859.t1 | AT2G44690 | 29.825 | 171 | 105 | 5 | 8 | 169 | 18 | 182 | 3.66e-16 | 73.9 |
| MS.gene88859.t1 | AT2G17800 | 30.337 | 178 | 107 | 6 | 1 | 169 | 1 | 170 | 4.56e-16 | 73.6 |
| MS.gene88859.t1 | AT2G17800 | 30.337 | 178 | 107 | 6 | 1 | 169 | 1 | 170 | 4.56e-16 | 73.6 |
| MS.gene88859.t1 | AT4G35950 | 30.337 | 178 | 107 | 6 | 1 | 169 | 1 | 170 | 5.73e-16 | 73.2 |
| MS.gene88859.t1 | AT3G48040 | 29.775 | 178 | 110 | 5 | 1 | 169 | 1 | 172 | 1.20e-15 | 72.8 |
| MS.gene88859.t1 | AT5G62880 | 29.213 | 178 | 111 | 5 | 1 | 169 | 1 | 172 | 2.81e-15 | 72.0 |
| MS.gene88859.t1 | AT5G62880 | 28.889 | 180 | 113 | 5 | 1 | 171 | 1 | 174 | 8.04e-15 | 70.1 |
| MS.gene88859.t1 | AT3G48040 | 28.415 | 183 | 114 | 6 | 1 | 174 | 1 | 175 | 2.06e-13 | 66.2 |
| MS.gene88859.t1 | AT4G35020 | 33.594 | 128 | 76 | 5 | 1 | 127 | 1 | 120 | 4.15e-13 | 64.7 |
| MS.gene88859.t1 | AT4G35020 | 33.594 | 128 | 76 | 5 | 1 | 127 | 1 | 120 | 4.15e-13 | 64.7 |
Find 44 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTCCAAGCAATATAAA+TGG | 0.260081 | 1.1:-70125228 | None:intergenic |
| AATGGAAATGCCCTTGTATC+AGG | 0.343477 | 1.1:-70125210 | None:intergenic |
| CAAGTTTAGTCAGCAGTATA+AGG | 0.371559 | 1.1:+70124121 | MS.gene88859:CDS |
| GCATTTCCATTTATATTGCT+TGG | 0.372285 | 1.1:+70125222 | MS.gene88859:CDS |
| CGTTTGATTCACTTGACAAC+TGG | 0.386540 | 1.1:+70124423 | MS.gene88859:CDS |
| CCACCACTTTGCTCACTCTC+TGG | 0.394400 | 1.1:-70127898 | None:intergenic |
| GGAAACAAGATTGATATTGA+TGG | 0.401120 | 1.1:+70125243 | MS.gene88859:CDS |
| CCTGTTCACGCTCATTGGCC+AGG | 0.406113 | 1.1:-70125473 | None:intergenic |
| CTTTGAGACATCTGCAAAAG+AGG | 0.406390 | 1.1:+70125407 | MS.gene88859:CDS |
| CATGTCCTGTTCACGCTCAT+TGG | 0.416752 | 1.1:-70125478 | None:intergenic |
| TTGCTCAAGGTCATTGTTCT+CGG | 0.417195 | 1.1:+70123567 | MS.gene88859:CDS |
| TCACTCTCTGGAACCGCCTC+AGG | 0.429595 | 1.1:-70127886 | None:intergenic |
| AAGGACTGGTGTGCTTCAAA+AGG | 0.438389 | 1.1:+70125372 | MS.gene88859:CDS |
| CCTGGCCAATGAGCGTGAAC+AGG | 0.444323 | 1.1:+70125473 | MS.gene88859:CDS |
| AAAACGCAACTCCAAGACTT+TGG | 0.454601 | 1.1:-70124349 | None:intergenic |
| GCACGAGGAGTTTCTCAAAC+AGG | 0.463788 | 1.1:+70124445 | MS.gene88859:CDS |
| CAGCAGTATAAGGCAACAAT+TGG | 0.468961 | 1.1:+70124131 | MS.gene88859:CDS |
| AGTGAGCAAAGTGGTGGTGG+TGG | 0.473564 | 1.1:+70127904 | MS.gene88859:CDS |
| CAAGAGAGATTCCAAAGTCT+TGG | 0.473805 | 1.1:+70124338 | MS.gene88859:CDS |
| AGGCAAACCCTCCTGATACA+AGG | 0.495242 | 1.1:+70125199 | MS.gene88859:intron |
| CTGTTCACGCTCATTGGCCA+GGG | 0.503718 | 1.1:-70125472 | None:intergenic |
| TTTGCAGATGTCTCAAAGTA+GGG | 0.510999 | 1.1:-70125402 | None:intergenic |
| AGGACTGGTGTGCTTCAAAA+GGG | 0.543802 | 1.1:+70125373 | MS.gene88859:CDS |
| TCATTGTTCTCGGCTATAGC+GGG | 0.563083 | 1.1:+70123577 | MS.gene88859:CDS |
| GGCAAACCCTCCTGATACAA+GGG | 0.564253 | 1.1:+70125200 | MS.gene88859:intron |
| CTGAGAAGAAAGCAAAGGAC+TGG | 0.565046 | 1.1:+70125358 | MS.gene88859:CDS |
| TGGTAGATATGGGACACTGC+TGG | 0.568483 | 1.1:+70124314 | MS.gene88859:intron |
| ACAAGATTGATATTGATGGC+GGG | 0.576782 | 1.1:+70125247 | MS.gene88859:CDS |
| GTGTATTGCAAAGACTGCCC+TGG | 0.577400 | 1.1:+70125455 | MS.gene88859:CDS |
| GAGAGTGAGCAAAGTGGTGG+TGG | 0.590052 | 1.1:+70127901 | MS.gene88859:CDS |
| GTCATTGTTCTCGGCTATAG+CGG | 0.605154 | 1.1:+70123576 | MS.gene88859:CDS |
| AACAAGATTGATATTGATGG+CGG | 0.609685 | 1.1:+70125246 | MS.gene88859:CDS |
| GAGAACAATGACCTTGAGCA+AGG | 0.617108 | 1.1:-70123565 | None:intergenic |
| GGAAATGCCCTTGTATCAGG+AGG | 0.623997 | 1.1:-70125207 | None:intergenic |
| ACGAGGATACTGATTCATCA+AGG | 0.628381 | 1.1:-70123718 | None:intergenic |
| GCGCAGACGAACCTTGCTCA+AGG | 0.628869 | 1.1:+70123554 | MS.gene88859:CDS |
| TTCACTTGACAACTGGCACG+AGG | 0.633292 | 1.1:+70124430 | MS.gene88859:CDS |
| GAAATGCCCTTGTATCAGGA+GGG | 0.644750 | 1.1:-70125206 | None:intergenic |
| CGTATGATGTGAACGTCATG+AGG | 0.648807 | 1.1:+70124399 | MS.gene88859:CDS |
| CCAGAGAGTGAGCAAAGTGG+TGG | 0.665389 | 1.1:+70127898 | MS.gene88859:CDS |
| GGTTTCTGAGAAGAAAGCAA+AGG | 0.667441 | 1.1:+70125353 | MS.gene88859:intron |
| TGATGGCGGGAATAGTCGAG+TGG | 0.710562 | 1.1:+70125260 | MS.gene88859:CDS |
| GTTCCAGAGAGTGAGCAAAG+TGG | 0.720662 | 1.1:+70127895 | MS.gene88859:CDS |
| AGGATACTGATTCATCAAGG+AGG | 0.733636 | 1.1:-70123715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAATATTTAACAAATTAA+AGG | - | chr1.1:70125649-70125668 | None:intergenic | 10.0% |
| !!! | ACTAATTATAATGTTTTTAT+TGG | + | chr1.1:70125600-70125619 | MS.gene88859:intron | 10.0% |
| !! | AAAATAAAAACTTTATGAGA+TGG | - | chr1.1:70123822-70123841 | None:intergenic | 15.0% |
| !! | AAATAAAAACTTTATGAGAT+GGG | - | chr1.1:70123821-70123840 | None:intergenic | 15.0% |
| !! | AGGATTGTTTATATAATAAT+AGG | + | chr1.1:70124721-70124740 | MS.gene88859:intron | 15.0% |
| !! | ATAAGATAATTAGACATTTA+TGG | - | chr1.1:70125328-70125347 | None:intergenic | 15.0% |
| !! | TATAGATATTATTTCCTTAT+GGG | + | chr1.1:70124052-70124071 | MS.gene88859:intron | 15.0% |
| !! | TATTAACAAAATACTAAGTT+AGG | + | chr1.1:70127056-70127075 | MS.gene88859:intron | 15.0% |
| !! | TTATAGATATTATTTCCTTA+TGG | + | chr1.1:70124051-70124070 | MS.gene88859:intron | 15.0% |
| !!! | AAAATTTTGTTTATTTGAGT+GGG | + | chr1.1:70124276-70124295 | MS.gene88859:intron | 15.0% |
| !!! | AAAGTTTTGACTTTATTTTT+TGG | + | chr1.1:70123979-70123998 | MS.gene88859:intron | 15.0% |
| !!! | AAGTTTTGACTTTATTTTTT+GGG | + | chr1.1:70123980-70123999 | MS.gene88859:intron | 15.0% |
| !!! | AATAAATACATGCTTTTTTT+AGG | + | chr1.1:70124701-70124720 | MS.gene88859:intron | 15.0% |
| !!! | ATTAGTTTGTTATTATTCTT+TGG | + | chr1.1:70125706-70125725 | MS.gene88859:intron | 15.0% |
| !!! | GAAATATTTTTTGTCAATAT+AGG | - | chr1.1:70125968-70125987 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTAGAAACAAAC+AGG | - | chr1.1:70124986-70125005 | None:intergenic | 15.0% |
| !!! | TCTTGATATTTTATAGTTTA+TGG | + | chr1.1:70124557-70124576 | MS.gene88859:intron | 15.0% |
| !!! | TGAATATGATTTTAAGATAA+TGG | - | chr1.1:70125917-70125936 | None:intergenic | 15.0% |
| !!! | TTTGTTTCTAAAAAAAATAC+TGG | + | chr1.1:70124987-70125006 | MS.gene88859:intron | 15.0% |
| !! | ACATTTATGGACATAAATTA+AGG | - | chr1.1:70125315-70125334 | None:intergenic | 20.0% |
| !! | ACTCAATTTGAAAATTTAGA+AGG | - | chr1.1:70127789-70127808 | None:intergenic | 20.0% |
| !! | ATAGATATTATTTCCTTATG+GGG | + | chr1.1:70124053-70124072 | MS.gene88859:intron | 20.0% |
| !! | ATATATTAAAACAACGATGA+TGG | - | chr1.1:70126093-70126112 | None:intergenic | 20.0% |
| !! | ATCAAAGAAGTCTTTATATT+TGG | - | chr1.1:70126123-70126142 | None:intergenic | 20.0% |
| !! | ATGAAAAAGATAAGAGTTAT+TGG | + | chr1.1:70127336-70127355 | MS.gene88859:intron | 20.0% |
| !! | CAATGAAAATGAAAGAAAAA+GGG | - | chr1.1:70123680-70123699 | None:intergenic | 20.0% |
| !! | CACATATCTAATTTAGTTAA+GGG | - | chr1.1:70124096-70124115 | None:intergenic | 20.0% |
| !! | GAATGGAAGAAAAAAAAAAA+CGG | - | chr1.1:70123635-70123654 | None:intergenic | 20.0% |
| !! | GTTATAAAAAGATGAAAGAA+TGG | - | chr1.1:70125035-70125054 | None:intergenic | 20.0% |
| !! | TAAGTGATAATTAGTTAGTT+TGG | + | chr1.1:70123908-70123927 | MS.gene88859:intron | 20.0% |
| !! | TATTTCATAAAAAGTAAGAG+CGG | + | chr1.1:70125883-70125902 | MS.gene88859:intron | 20.0% |
| !! | TCAAAGAAGTCTTTATATTT+GGG | - | chr1.1:70126122-70126141 | None:intergenic | 20.0% |
| !! | TCAAGAAAAAAATTAATAGC+AGG | - | chr1.1:70124543-70124562 | None:intergenic | 20.0% |
| !! | TTAAGTGTGAAATTAACAAA+CGG | - | chr1.1:70123759-70123778 | None:intergenic | 20.0% |
| !!! | AACTTCTGTTGTTTTTATTA+TGG | + | chr1.1:70123944-70123963 | MS.gene88859:intron | 20.0% |
| !!! | ACATTCATTTTAATGTCTAT+TGG | - | chr1.1:70124630-70124649 | None:intergenic | 20.0% |
| !!! | ACTTAGTATTTTGTTAATAG+AGG | - | chr1.1:70127055-70127074 | None:intergenic | 20.0% |
| !!! | AGTGTTCTATCTTTTAAATT+GGG | + | chr1.1:70124953-70124972 | MS.gene88859:intron | 20.0% |
| !!! | ATTATTCTTTGGAAATATCA+AGG | + | chr1.1:70125717-70125736 | MS.gene88859:intron | 20.0% |
| !!! | ATTTTTTGTCAATATAGGTT+TGG | - | chr1.1:70125963-70125982 | None:intergenic | 20.0% |
| !!! | CTCTTACTTTTTATGAAATA+AGG | - | chr1.1:70125883-70125902 | None:intergenic | 20.0% |
| !!! | GAAAATTTTGTTTATTTGAG+TGG | + | chr1.1:70124275-70124294 | MS.gene88859:intron | 20.0% |
| !!! | GTTTTTATTTTTAACTCATC+TGG | + | chr1.1:70123831-70123850 | MS.gene88859:intron | 20.0% |
| !!! | TAAAATTTTCTTCCTTTTCT+GGG | + | chr1.1:70127738-70127757 | MS.gene88859:intron | 20.0% |
| !!! | TAGGAATTTTTAAAGATGAT+TGG | - | chr1.1:70127523-70127542 | None:intergenic | 20.0% |
| !!! | TCATCGTTGTTTTAATATAT+TGG | + | chr1.1:70126093-70126112 | MS.gene88859:intron | 20.0% |
| !!! | TTATGATACTACTAATTTTG+AGG | - | chr1.1:70126588-70126607 | None:intergenic | 20.0% |
| ! | AAAGAAGTCTTTATATTTGG+GGG | - | chr1.1:70126120-70126139 | None:intergenic | 25.0% |
| ! | AAGAATGGAAGTCAAATATA+AGG | - | chr1.1:70125020-70125039 | None:intergenic | 25.0% |
| ! | AATAGGTTTATGTTAGTTGA+GGG | + | chr1.1:70124738-70124757 | MS.gene88859:intron | 25.0% |
| ! | AGATAATTTGATTCAGATGA+TGG | + | chr1.1:70126522-70126541 | MS.gene88859:intron | 25.0% |
| ! | ATAAATTAGTCAGATTGTGA+AGG | + | chr1.1:70124859-70124878 | MS.gene88859:intron | 25.0% |
| ! | ATTGAAAGATCAATGTCTTT+CGG | - | chr1.1:70127434-70127453 | None:intergenic | 25.0% |
| ! | ATTTCACACTTAATTGTTCA+CGG | + | chr1.1:70123766-70123785 | MS.gene88859:intron | 25.0% |
| ! | CAAAGAAGTCTTTATATTTG+GGG | - | chr1.1:70126121-70126140 | None:intergenic | 25.0% |
| ! | CAAATTAAAGGTTCATACAA+TGG | - | chr1.1:70125637-70125656 | None:intergenic | 25.0% |
| ! | CATAATGATCAAATTAAGTG+CGG | - | chr1.1:70124607-70124626 | None:intergenic | 25.0% |
| ! | CTAAAAGAGGATAAATTAGA+TGG | - | chr1.1:70125990-70126009 | None:intergenic | 25.0% |
| ! | CTAAATAAGATAGGTTTAGA+AGG | + | chr1.1:70127663-70127682 | MS.gene88859:intron | 25.0% |
| ! | GAATCAAATTATCTTCTAGA+AGG | - | chr1.1:70126516-70126535 | None:intergenic | 25.0% |
| ! | GCAATGAAAATGAAAGAAAA+AGG | - | chr1.1:70123681-70123700 | None:intergenic | 25.0% |
| ! | GCACATATCTAATTTAGTTA+AGG | - | chr1.1:70124097-70124116 | None:intergenic | 25.0% |
| ! | TAAGTGTGAAATTAACAAAC+GGG | - | chr1.1:70123758-70123777 | None:intergenic | 25.0% |
| ! | TAATAGGTTTATGTTAGTTG+AGG | + | chr1.1:70124737-70124756 | MS.gene88859:intron | 25.0% |
| ! | TCACAATCTGACTAATTTAT+AGG | - | chr1.1:70124859-70124878 | None:intergenic | 25.0% |
| ! | TCGAATTATTACGATTTGAA+TGG | - | chr1.1:70123652-70123671 | None:intergenic | 25.0% |
| ! | TGAGTTAAATGCATCAAAAT+TGG | - | chr1.1:70127464-70127483 | None:intergenic | 25.0% |
| ! | TTGTTTCCAAGCAATATAAA+TGG | - | chr1.1:70125231-70125250 | None:intergenic | 25.0% |
| !! | AAAATTTTCTTCCTTTTCTG+GGG | + | chr1.1:70127739-70127758 | MS.gene88859:intron | 25.0% |
| !! | CAGTGTTCTATCTTTTAAAT+TGG | + | chr1.1:70124952-70124971 | MS.gene88859:intron | 25.0% |
| !! | CTAAAATTTTCTTCCTTTTC+TGG | + | chr1.1:70127737-70127756 | MS.gene88859:intron | 25.0% |
| !! | GTGTTCTATCTTTTAAATTG+GGG | + | chr1.1:70124954-70124973 | MS.gene88859:intron | 25.0% |
| !! | TAATCAACGGATAAAGTTTT+GGG | + | chr1.1:70124890-70124909 | MS.gene88859:intron | 25.0% |
| !! | TGAATTGCAGATATTTTCAA+GGG | + | chr1.1:70127860-70127879 | MS.gene88859:intron | 25.0% |
| !! | TTCTCTCTGAATTTAAAACA+GGG | - | chr1.1:70125676-70125695 | None:intergenic | 25.0% |
| !! | TTGAATTGCAGATATTTTCA+AGG | + | chr1.1:70127859-70127878 | MS.gene88859:intron | 25.0% |
| !! | TTTCTCTCTGAATTTAAAAC+AGG | - | chr1.1:70125677-70125696 | None:intergenic | 25.0% |
| !!! | AATTTCTTTTTCAGTTGCTA+AGG | - | chr1.1:70127147-70127166 | None:intergenic | 25.0% |
| !!! | ATTTCTTTTTCAGTTGCTAA+GGG | - | chr1.1:70127146-70127165 | None:intergenic | 25.0% |
| !!! | CAACAAAAGTGTTGTTTATA+AGG | - | chr1.1:70124484-70124503 | None:intergenic | 25.0% |
| AAATTGGGAGCAAAAGAAAA+TGG | - | chr1.1:70126692-70126711 | None:intergenic | 30.0% | |
| AACAAGATTGATATTGATGG+CGG | + | chr1.1:70125246-70125265 | MS.gene88859:CDS | 30.0% | |
| AACCTTAAACAAGTCAAATC+AGG | - | chr1.1:70124014-70124033 | None:intergenic | 30.0% | |
| AATCAAACTACGTAGTATGT+AGG | + | chr1.1:70126390-70126409 | MS.gene88859:intron | 30.0% | |
| AATTGGGAGCAAAAGAAAAT+GGG | - | chr1.1:70126691-70126710 | None:intergenic | 30.0% | |
| ACTATCTTAGAATTCCAGTT+AGG | + | chr1.1:70126315-70126334 | MS.gene88859:intron | 30.0% | |
| ACTCATTCATTGTTTACAAC+TGG | + | chr1.1:70126029-70126048 | MS.gene88859:intron | 30.0% | |
| ACTCCTATTACAAACATCAA+TGG | + | chr1.1:70127587-70127606 | MS.gene88859:intron | 30.0% | |
| ATAGCAGAAACAATGTGAAA+TGG | - | chr1.1:70126068-70126087 | None:intergenic | 30.0% | |
| ATTAAGGAAACTTAGAAGTG+AGG | - | chr1.1:70125299-70125318 | None:intergenic | 30.0% | |
| ATTACAAACATCAATGGTGA+AGG | + | chr1.1:70127593-70127612 | MS.gene88859:intron | 30.0% | |
| CGTAGTTTGATTGTAACATA+AGG | - | chr1.1:70126382-70126401 | None:intergenic | 30.0% | |
| CTAAATAGAAAGGAACTGTA+AGG | + | chr1.1:70127561-70127580 | MS.gene88859:intron | 30.0% | |
| CTTACAAAAAGTCAGAATCT+TGG | + | chr1.1:70124664-70124683 | MS.gene88859:intron | 30.0% | |
| CTTCATTATCCCTATGAAAT+AGG | + | chr1.1:70126615-70126634 | MS.gene88859:intron | 30.0% | |
| GACATTAAAATGAATGTAGC+TGG | + | chr1.1:70124633-70124652 | MS.gene88859:intron | 30.0% | |
| GAGGAGATTCTAAATAAGAT+AGG | + | chr1.1:70127654-70127673 | MS.gene88859:intron | 30.0% | |
| GATCATATCTCTAATTAACG+TGG | + | chr1.1:70126140-70126159 | MS.gene88859:intron | 30.0% | |
| GCATTTCCATTTATATTGCT+TGG | + | chr1.1:70125222-70125241 | MS.gene88859:CDS | 30.0% | |
| GGAAACAAGATTGATATTGA+TGG | + | chr1.1:70125243-70125262 | MS.gene88859:CDS | 30.0% | |
| GTATCTGCATCTAAATAGAA+AGG | + | chr1.1:70127551-70127570 | MS.gene88859:intron | 30.0% | |
| GTTCATGCATCATATCTAAA+TGG | - | chr1.1:70126997-70127016 | None:intergenic | 30.0% | |
| TACGATCTTGTAAATCTCTA+TGG | - | chr1.1:70125855-70125874 | None:intergenic | 30.0% | |
| TCACCATTGATGTTTGTAAT+AGG | - | chr1.1:70127593-70127612 | None:intergenic | 30.0% | |
| TGTCTAATTATCTTATGTGC+AGG | + | chr1.1:70125332-70125351 | MS.gene88859:intron | 30.0% | |
| TTATGGTTATGACGAGAAAA+AGG | + | chr1.1:70124574-70124593 | MS.gene88859:intron | 30.0% | |
| TTGATTGTAACATAAGGCTT+GGG | - | chr1.1:70126376-70126395 | None:intergenic | 30.0% | |
| TTGCTTTCTGTTCCAATAAT+AGG | - | chr1.1:70127094-70127113 | None:intergenic | 30.0% | |
| TTGTCTGTTAGAAAGAAGAA+TGG | + | chr1.1:70126946-70126965 | MS.gene88859:intron | 30.0% | |
| TTTCACACTTAATTGTTCAC+GGG | + | chr1.1:70123767-70123786 | MS.gene88859:intron | 30.0% | |
| TTTGATTGTAACATAAGGCT+TGG | - | chr1.1:70126377-70126396 | None:intergenic | 30.0% | |
| ! | AAATTTTCTTCCTTTTCTGG+GGG | + | chr1.1:70127740-70127759 | MS.gene88859:intron | 30.0% |
| ! | AACACTTTTGTTGCATTTTG+TGG | + | chr1.1:70124491-70124510 | MS.gene88859:intron | 30.0% |
| ! | AGTTTTCATTCCCATGAAAT+AGG | + | chr1.1:70126555-70126574 | MS.gene88859:intron | 30.0% |
| ! | CTAATCAACGGATAAAGTTT+TGG | + | chr1.1:70124889-70124908 | MS.gene88859:intron | 30.0% |
| ! | TCTTGTGAAGATTCTAAAAG+AGG | - | chr1.1:70126003-70126022 | None:intergenic | 30.0% |
| ! | TTCTTTCATTTTCATTGCCA+GGG | + | chr1.1:70123683-70123702 | MS.gene88859:intron | 30.0% |
| ! | TTTCTTTCATTTTCATTGCC+AGG | + | chr1.1:70123682-70123701 | MS.gene88859:intron | 30.0% |
| ! | TTTGTTGCATTTTGTGGTTT+AGG | + | chr1.1:70124497-70124516 | MS.gene88859:intron | 30.0% |
| !! | AGACCTATTGGTTCAAAAAT+TGG | - | chr1.1:70126708-70126727 | None:intergenic | 30.0% |
| !! | ATGATATGGTTGGTAGATAT+GGG | + | chr1.1:70124304-70124323 | MS.gene88859:intron | 30.0% |
| !! | CTGGAATTCTAAGATAGTAT+TGG | - | chr1.1:70126313-70126332 | None:intergenic | 30.0% |
| !! | GACCTATTGGTTCAAAAATT+GGG | - | chr1.1:70126707-70126726 | None:intergenic | 30.0% |
| !! | TATGATATGGTTGGTAGATA+TGG | + | chr1.1:70124303-70124322 | MS.gene88859:intron | 30.0% |
| !!! | GCTTTTGTTTTTTCTGTTCT+TGG | + | chr1.1:70124244-70124263 | MS.gene88859:intron | 30.0% |
| !!! | TGTTTTAGCATGCCTATTAT+TGG | + | chr1.1:70127079-70127098 | MS.gene88859:intron | 30.0% |
| !!! | TTTCTTTTTCAGTTGCTAAG+GGG | - | chr1.1:70127145-70127164 | None:intergenic | 30.0% |
| AACTTGAATAGTGCTCCTTA+GGG | + | chr1.1:70125751-70125770 | MS.gene88859:intron | 35.0% | |
| AAGAATGGAAGTTAGTTCAC+GGG | + | chr1.1:70126961-70126980 | MS.gene88859:intron | 35.0% | |
| AAGTGCCTCAAAATTAATGC+TGG | + | chr1.1:70126640-70126659 | MS.gene88859:intron | 35.0% | |
| AATAGGTCTGTCTTACTCAA+AGG | + | chr1.1:70126719-70126738 | MS.gene88859:intron | 35.0% | |
| AATCTGTTCTTTCATGTTGC+TGG | - | chr1.1:70127634-70127653 | None:intergenic | 35.0% | |
| AATTAGTCAGATTGTGAAGG+AGG | + | chr1.1:70124862-70124881 | MS.gene88859:intron | 35.0% | |
| ACAATCTGATCAGTAAGAGA+TGG | - | chr1.1:70125072-70125091 | None:intergenic | 35.0% | |
| AGGCACTTAACCTATTTCAT+AGG | - | chr1.1:70126568-70126587 | None:intergenic | 35.0% | |
| AGGCACTTAACCTATTTCAT+GGG | - | chr1.1:70126568-70126587 | None:intergenic | 35.0% | |
| ATAGGTCTGTCTTACTCAAA+GGG | + | chr1.1:70126720-70126739 | MS.gene88859:intron | 35.0% | |
| ATTAGTCAGATTGTGAAGGA+GGG | + | chr1.1:70124863-70124882 | MS.gene88859:intron | 35.0% | |
| CAACATGAAAGAACAGATTG+AGG | + | chr1.1:70127635-70127654 | MS.gene88859:intron | 35.0% | |
| CAAGTTTAGTCAGCAGTATA+AGG | + | chr1.1:70124121-70124140 | MS.gene88859:CDS | 35.0% | |
| CAGTATCTATTGAAAGTCTG+CGG | + | chr1.1:70126435-70126454 | MS.gene88859:intron | 35.0% | |
| CTTATCCTAGATCTGTCATA+TGG | - | chr1.1:70126288-70126307 | None:intergenic | 35.0% | |
| GAAGAATGGAAGTTAGTTCA+CGG | + | chr1.1:70126960-70126979 | MS.gene88859:intron | 35.0% | |
| GAGTTGGGATGAAATTATAC+AGG | + | chr1.1:70126893-70126912 | MS.gene88859:intron | 35.0% | |
| GATGCATGTACTAAGATTTG+AGG | - | chr1.1:70127767-70127786 | None:intergenic | 35.0% | |
| GGCACTTAACCTATTTCATA+GGG | - | chr1.1:70126627-70126646 | None:intergenic | 35.0% | |
| TAACTTGAATAGTGCTCCTT+AGG | + | chr1.1:70125750-70125769 | MS.gene88859:intron | 35.0% | |
| TATAATTTCATCCCAACTCC+AGG | - | chr1.1:70126892-70126911 | None:intergenic | 35.0% | |
| TCTACCTAATGAGTGATTGA+CGG | + | chr1.1:70127166-70127185 | MS.gene88859:intron | 35.0% | |
| TTATGTTCTTCTTGTGACTC+AGG | + | chr1.1:70125179-70125198 | MS.gene88859:intron | 35.0% | |
| TTCAAAAGATTAGAGTGCAC+AGG | + | chr1.1:70127359-70127378 | MS.gene88859:intron | 35.0% | |
| TTCATAGACTTCACTTGAGA+CGG | - | chr1.1:70127321-70127340 | None:intergenic | 35.0% | |
| TTTAGTTAAGGGTCCACAAA+AGG | - | chr1.1:70124085-70124104 | None:intergenic | 35.0% | |
| TTTGAGTAAGACAGACCTAT+TGG | - | chr1.1:70126720-70126739 | None:intergenic | 35.0% | |
| TTTGCAGATGTCTCAAAGTA+GGG | - | chr1.1:70125405-70125424 | None:intergenic | 35.0% | |
| ! | AATTTTCTTCCTTTTCTGGG+GGG | + | chr1.1:70127741-70127760 | MS.gene88859:intron | 35.0% |
| ! | ACAAGATTGATATTGATGGC+GGG | + | chr1.1:70125247-70125266 | MS.gene88859:CDS | 35.0% |
| ! | ACTCACCAGCATTAATTTTG+AGG | - | chr1.1:70126648-70126667 | None:intergenic | 35.0% |
| ! | ATTGAGTGTTTTCAGCTTGT+GGG | - | chr1.1:70125792-70125811 | None:intergenic | 35.0% |
| ! | CTCCCAATTTTTGAACCAAT+AGG | + | chr1.1:70126702-70126721 | MS.gene88859:intron | 35.0% |
| ! | CTTGTTTAAGGTTGTGTTTG+AGG | + | chr1.1:70124021-70124040 | MS.gene88859:intron | 35.0% |
| ! | GGTTGGGTTAAACAAGTTTT+TGG | + | chr1.1:70127281-70127300 | MS.gene88859:intron | 35.0% |
| ! | TCAACTTGCTTTGTTGATGT+GGG | - | chr1.1:70127236-70127255 | None:intergenic | 35.0% |
| ! | TCTCTGAATTTAAAACAGGG+TGG | - | chr1.1:70125673-70125692 | None:intergenic | 35.0% |
| ! | TGAGATGGGTTTCAAAGAAA+TGG | - | chr1.1:70123807-70123826 | None:intergenic | 35.0% |
| ! | TGCAATCCAACTTGTAGTTT+TGG | + | chr1.1:70127260-70127279 | MS.gene88859:intron | 35.0% |
| ! | TTCAACTTGCTTTGTTGATG+TGG | - | chr1.1:70127237-70127256 | None:intergenic | 35.0% |
| ! | TTGAGTGGGTTTGTATGATA+TGG | + | chr1.1:70124290-70124309 | MS.gene88859:intron | 35.0% |
| ! | TTGGAGTTGCGTTTTATAGA+GGG | + | chr1.1:70124357-70124376 | MS.gene88859:CDS | 35.0% |
| ! | TTTTGCAGATGTCTCAAAGT+AGG | - | chr1.1:70125406-70125425 | None:intergenic | 35.0% |
| !! | ATATTTTCAAGGGATTCCTG+AGG | + | chr1.1:70127870-70127889 | MS.gene88859:CDS | 35.0% |
| !! | CACCTGATTTGACTTGTTTA+AGG | + | chr1.1:70124009-70124028 | MS.gene88859:intron | 35.0% |
| !!! | ATCCAACTTGTAGTTTTGGT+TGG | + | chr1.1:70127264-70127283 | MS.gene88859:intron | 35.0% |
| !!! | TCCAACTTGTAGTTTTGGTT+GGG | + | chr1.1:70127265-70127284 | MS.gene88859:intron | 35.0% |
| AAAACGCAACTCCAAGACTT+TGG | - | chr1.1:70124352-70124371 | None:intergenic | 40.0% | |
| AAATGCCATATGTGGACTTG+GGG | + | chr1.1:70127392-70127411 | MS.gene88859:intron | 40.0% | |
| AACAAACGGGTAAGAAACCA+AGG | - | chr1.1:70123745-70123764 | None:intergenic | 40.0% | |
| AAGACAATAGATGCTTAGCC+TGG | + | chr1.1:70126871-70126890 | MS.gene88859:intron | 40.0% | |
| AAGTTGGCAAATGCCATATG+TGG | + | chr1.1:70127384-70127403 | MS.gene88859:intron | 40.0% | |
| AATGGAAATGCCCTTGTATC+AGG | - | chr1.1:70125213-70125232 | None:intergenic | 40.0% | |
| ACCCAACCAAAACTACAAGT+TGG | - | chr1.1:70127269-70127288 | None:intergenic | 40.0% | |
| ACTACGTAGTATGTAGGAAG+AGG | + | chr1.1:70126396-70126415 | MS.gene88859:intron | 40.0% | |
| ACTTGTAGTTGAGACTTGAG+AGG | + | chr1.1:70124798-70124817 | MS.gene88859:intron | 40.0% | |
| AGGGACGCAATGTGATAATT+TGG | + | chr1.1:70124818-70124837 | MS.gene88859:intron | 40.0% | |
| AGTGAACATATCAGTGACTG+AGG | - | chr1.1:70125832-70125851 | None:intergenic | 40.0% | |
| ATAGGCATGCTATACTAGGA+TGG | + | chr1.1:70127202-70127221 | MS.gene88859:intron | 40.0% | |
| ATGTCTAGTCCTAGACATGA+GGG | - | chr1.1:70126240-70126259 | None:intergenic | 40.0% | |
| ATTACAACACCCTCATGTCT+AGG | + | chr1.1:70126228-70126247 | MS.gene88859:intron | 40.0% | |
| ATTGAAAGTCTGCGGTAATG+TGG | + | chr1.1:70126443-70126462 | MS.gene88859:intron | 40.0% | |
| CAAAAGGCTAAATCCCCATA+AGG | - | chr1.1:70124069-70124088 | None:intergenic | 40.0% | |
| CAAATGCCATATGTGGACTT+GGG | + | chr1.1:70127391-70127410 | MS.gene88859:intron | 40.0% | |
| CAAGAGAGATTCCAAAGTCT+TGG | + | chr1.1:70124338-70124357 | MS.gene88859:CDS | 40.0% | |
| CACAATAGGCATGCTATACT+AGG | + | chr1.1:70127198-70127217 | MS.gene88859:intron | 40.0% | |
| CAGCAGTATAAGGCAACAAT+TGG | + | chr1.1:70124131-70124150 | MS.gene88859:CDS | 40.0% | |
| CGTTTGATTCACTTGACAAC+TGG | + | chr1.1:70124423-70124442 | MS.gene88859:CDS | 40.0% | |
| CTAGTATAGCATGCCTATTG+TGG | - | chr1.1:70127200-70127219 | None:intergenic | 40.0% | |
| CTTGTAGTTGAGACTTGAGA+GGG | + | chr1.1:70124799-70124818 | MS.gene88859:intron | 40.0% | |
| GGGAAAATGTGACAAAAGCA+AGG | - | chr1.1:70126671-70126690 | None:intergenic | 40.0% | |
| GTGGGTTTGTATGATATGGT+TGG | + | chr1.1:70124294-70124313 | MS.gene88859:intron | 40.0% | |
| TACATCTGCCAATGCTCAAA+TGG | - | chr1.1:70124916-70124935 | None:intergenic | 40.0% | |
| TATAGCATGCCTATTGTGGT+AGG | - | chr1.1:70127196-70127215 | None:intergenic | 40.0% | |
| TATGAATTGAAGCTGTGCTG+TGG | + | chr1.1:70125527-70125546 | MS.gene88859:intron | 40.0% | |
| TGGAACAGAAAGCAAGCTTT+GGG | + | chr1.1:70127099-70127118 | MS.gene88859:intron | 40.0% | |
| TGTGACCATATGACAGATCT+AGG | + | chr1.1:70126280-70126299 | MS.gene88859:intron | 40.0% | |
| TTAGAGTGCACAGGAAAAGT+TGG | + | chr1.1:70127368-70127387 | MS.gene88859:intron | 40.0% | |
| TTGAAAGTCTGCGGTAATGT+GGG | + | chr1.1:70126444-70126463 | MS.gene88859:intron | 40.0% | |
| TTGCTCAAGGTCATTGTTCT+CGG | + | chr1.1:70123567-70123586 | MS.gene88859:CDS | 40.0% | |
| TTGGAACAGAAAGCAAGCTT+TGG | + | chr1.1:70127098-70127117 | MS.gene88859:intron | 40.0% | |
| ! | AGAGATGGAGCATTATCACA+AGG | - | chr1.1:70125057-70125076 | None:intergenic | 40.0% |
| ! | CATTGAGTGTTTTCAGCTTG+TGG | - | chr1.1:70125793-70125812 | None:intergenic | 40.0% |
| ! | CTTGGAGTTGCGTTTTATAG+AGG | + | chr1.1:70124356-70124375 | MS.gene88859:CDS | 40.0% |
| ! | GAGGCACTTAACCTATTTCA+TGG | - | chr1.1:70126569-70126588 | None:intergenic | 40.0% |
| ! | GGTTTCTGAGAAGAAAGCAA+AGG | + | chr1.1:70125353-70125372 | MS.gene88859:intron | 40.0% |
| ! | TGGAGTTGCGTTTTATAGAG+GGG | + | chr1.1:70124358-70124377 | MS.gene88859:CDS | 40.0% |
| ! | TTCATTTTCATTGCCAGGGT+TGG | + | chr1.1:70123687-70123706 | MS.gene88859:intron | 40.0% |
| !! | ACGAGGATACTGATTCATCA+AGG | - | chr1.1:70123721-70123740 | None:intergenic | 40.0% |
| !! | AGACATGAGGGTGTTGTAAT+TGG | - | chr1.1:70126228-70126247 | None:intergenic | 40.0% |
| !! | AGGATACTGATTCATCAAGG+AGG | - | chr1.1:70123718-70123737 | None:intergenic | 40.0% |
| !! | CTTTGAGACATCTGCAAAAG+AGG | + | chr1.1:70125407-70125426 | MS.gene88859:CDS | 40.0% |
| !! | GAAGGAGGGTATCTAATCAA+CGG | + | chr1.1:70124877-70124896 | MS.gene88859:intron | 40.0% |
| !! | TATGGGGATTTAGCCTTTTG+TGG | + | chr1.1:70124069-70124088 | MS.gene88859:intron | 40.0% |
| !! | TGATTAGCCTTCCAACTTAC+TGG | + | chr1.1:70125131-70125150 | MS.gene88859:intron | 40.0% |
| !!! | ATCTAGTTTTCGACGTGAGA+GGG | - | chr1.1:70126178-70126197 | None:intergenic | 40.0% |
| AGACTCGTCACACTACAAGT+GGG | + | chr1.1:70124191-70124210 | MS.gene88859:intron | 45.0% | |
| ATAGATGCTTAGCCTGGAGT+TGG | + | chr1.1:70126877-70126896 | MS.gene88859:intron | 45.0% | |
| ATCCGCTGCTTCAAAAGGTT+TGG | - | chr1.1:70126822-70126841 | None:intergenic | 45.0% | |
| CAGTTGCTAAGGGGAAAGTA+AGG | - | chr1.1:70127136-70127155 | None:intergenic | 45.0% | |
| CGTAGTATGTAGGAAGAGGA+TGG | + | chr1.1:70126400-70126419 | MS.gene88859:intron | 45.0% | |
| CGTATGATGTGAACGTCATG+AGG | + | chr1.1:70124399-70124418 | MS.gene88859:CDS | 45.0% | |
| CTGAGAAGAAAGCAAAGGAC+TGG | + | chr1.1:70125358-70125377 | MS.gene88859:CDS | 45.0% | |
| GAAATGCCCTTGTATCAGGA+GGG | - | chr1.1:70125209-70125228 | None:intergenic | 45.0% | |
| GAATCAGTATCCTCGTTCCT+TGG | + | chr1.1:70123725-70123744 | MS.gene88859:intron | 45.0% | |
| GAGAACAATGACCTTGAGCA+AGG | - | chr1.1:70123568-70123587 | None:intergenic | 45.0% | |
| GATGTCTAGTCCTAGACATG+AGG | - | chr1.1:70126241-70126260 | None:intergenic | 45.0% | |
| GCAAATGCCATATGTGGACT+TGG | + | chr1.1:70127390-70127409 | MS.gene88859:intron | 45.0% | |
| GCGGATTCACATGAAAATGC+TGG | + | chr1.1:70126836-70126855 | MS.gene88859:intron | 45.0% | |
| GGAACAGAAAGCAAGCTTTG+GGG | + | chr1.1:70127100-70127119 | MS.gene88859:intron | 45.0% | |
| GGTGAAGGAGTTCTCTAAAC+TGG | + | chr1.1:70127608-70127627 | MS.gene88859:intron | 45.0% | |
| GTCATTGTTCTCGGCTATAG+CGG | + | chr1.1:70123576-70123595 | MS.gene88859:CDS | 45.0% | |
| GTGAGACAAGTCCAGTAAGT+TGG | - | chr1.1:70125145-70125164 | None:intergenic | 45.0% | |
| TAGATGCTTAGCCTGGAGTT+GGG | + | chr1.1:70126878-70126897 | MS.gene88859:intron | 45.0% | |
| TCATTGTTCTCGGCTATAGC+GGG | + | chr1.1:70123577-70123596 | MS.gene88859:CDS | 45.0% | |
| TGTGAATCCGCTGCTTCAAA+AGG | - | chr1.1:70126827-70126846 | None:intergenic | 45.0% | |
| TTGGCCGTCAATCACTCATT+AGG | - | chr1.1:70127173-70127192 | None:intergenic | 45.0% | |
| ! | AAGGACTGGTGTGCTTCAAA+AGG | + | chr1.1:70125372-70125391 | MS.gene88859:CDS | 45.0% |
| ! | AGGACTGGTGTGCTTCAAAA+GGG | + | chr1.1:70125373-70125392 | MS.gene88859:CDS | 45.0% |
| ! | AGTTGCGTTTTATAGAGGGG+CGG | + | chr1.1:70124361-70124380 | MS.gene88859:CDS | 45.0% |
| ! | GACAAGTCCAGTAAGTTGGA+AGG | - | chr1.1:70125141-70125160 | None:intergenic | 45.0% |
| !! | AAAAACGGTGTTGCAGAGCA+AGG | - | chr1.1:70123620-70123639 | None:intergenic | 45.0% |
| !! | GAAAGCAAGCTTTGGGGAAT+TGG | + | chr1.1:70127106-70127125 | MS.gene88859:intron | 45.0% |
| !! | GTTTTGGGCCATTTGAGCAT+TGG | + | chr1.1:70124905-70124924 | MS.gene88859:intron | 45.0% |
| !! | TTTTCAAGGGATTCCTGAGG+CGG | + | chr1.1:70127873-70127892 | MS.gene88859:CDS | 45.0% |
| !!! | CACCAAACCTTTTGAAGCAG+CGG | + | chr1.1:70126817-70126836 | MS.gene88859:intron | 45.0% |
| !!! | GATCTAGTTTTCGACGTGAG+AGG | - | chr1.1:70126179-70126198 | None:intergenic | 45.0% |
| AGGACTAGACATCTCGAGTG+TGG | + | chr1.1:70126248-70126267 | MS.gene88859:intron | 50.0% | |
| AGGCAAACCCTCCTGATACA+AGG | + | chr1.1:70125199-70125218 | MS.gene88859:intron | 50.0% | |
| CAGACTCGTCACACTACAAG+TGG | + | chr1.1:70124190-70124209 | MS.gene88859:intron | 50.0% | |
| CATGTCCTGTTCACGCTCAT+TGG | - | chr1.1:70125481-70125500 | None:intergenic | 50.0% | |
| CTGAACAGGGATCTTCCCTA+AGG | - | chr1.1:70125769-70125788 | None:intergenic | 50.0% | |
| GCACGAGGAGTTTCTCAAAC+AGG | + | chr1.1:70124445-70124464 | MS.gene88859:CDS | 50.0% | |
| GCATGCCTATTGTGGTAGGT+TGG | - | chr1.1:70127192-70127211 | None:intergenic | 50.0% | |
| GGAAATGCCCTTGTATCAGG+AGG | - | chr1.1:70125210-70125229 | None:intergenic | 50.0% | |
| GGCAAACCCTCCTGATACAA+GGG | + | chr1.1:70125200-70125219 | MS.gene88859:intron | 50.0% | |
| GGGTAAGAAACCAAGGAACG+AGG | - | chr1.1:70123738-70123757 | None:intergenic | 50.0% | |
| GTGTATTGCAAAGACTGCCC+TGG | + | chr1.1:70125455-70125474 | MS.gene88859:CDS | 50.0% | |
| GTTCCAGAGAGTGAGCAAAG+TGG | + | chr1.1:70127895-70127914 | MS.gene88859:CDS | 50.0% | |
| TCAGCCTGTAGCTCAAGATG+CGG | + | chr1.1:70126344-70126363 | MS.gene88859:intron | 50.0% | |
| TCATCGACCAACCCTCCTTT+GGG | - | chr1.1:70127030-70127049 | None:intergenic | 50.0% | |
| TGCAGAGCAAGGAGGGAAAA+AGG | - | chr1.1:70123609-70123628 | None:intergenic | 50.0% | |
| TGGTAGATATGGGACACTGC+TGG | + | chr1.1:70124314-70124333 | MS.gene88859:intron | 50.0% | |
| TTCACTTGACAACTGGCACG+AGG | + | chr1.1:70124430-70124449 | MS.gene88859:CDS | 50.0% | |
| TTCATCGACCAACCCTCCTT+TGG | - | chr1.1:70127031-70127050 | None:intergenic | 50.0% | |
| ! | CAAGGAGGTTTTTCCAACCC+TGG | - | chr1.1:70123703-70123722 | None:intergenic | 50.0% |
| ! | TCTAGAACGTGATCGAACGC+AGG | + | chr1.1:70126199-70126218 | MS.gene88859:intron | 50.0% |
| ! | TTCAGCTTGTGGGCTGAACA+GGG | - | chr1.1:70125782-70125801 | None:intergenic | 50.0% |
| ! | TTTCAGCTTGTGGGCTGAAC+AGG | - | chr1.1:70125783-70125802 | None:intergenic | 50.0% |
| AGCCTCCCCAAGTCCACATA+TGG | - | chr1.1:70127400-70127419 | None:intergenic | 55.0% | |
| AGCCTGTAGCTCAAGATGCG+GGG | + | chr1.1:70126346-70126365 | MS.gene88859:intron | 55.0% | |
| CAGCCTGTAGCTCAAGATGC+GGG | + | chr1.1:70126345-70126364 | MS.gene88859:intron | 55.0% | |
| CAGGCTGAGCAAGACCTAAC+TGG | - | chr1.1:70126332-70126351 | None:intergenic | 55.0% | |
| CCACCACTTTGCTCACTCTC+TGG | - | chr1.1:70127901-70127920 | None:intergenic | 55.0% | |
| CCAGAGAGTGAGCAAAGTGG+TGG | + | chr1.1:70127898-70127917 | MS.gene88859:CDS | 55.0% | |
| CTGTTCACGCTCATTGGCCA+GGG | - | chr1.1:70125475-70125494 | None:intergenic | 55.0% | |
| GACGGCCAACCTACCACAAT+AGG | + | chr1.1:70127184-70127203 | MS.gene88859:intron | 55.0% | |
| GAGAGTGAGCAAAGTGGTGG+TGG | + | chr1.1:70127901-70127920 | MS.gene88859:CDS | 55.0% | |
| TGAACGTCAGCCTAGCCCAA+AGG | + | chr1.1:70127012-70127031 | MS.gene88859:intron | 55.0% | |
| TGCCATATGTGGACTTGGGG+AGG | + | chr1.1:70127395-70127414 | MS.gene88859:intron | 55.0% | |
| ! | GATTTGAGGCCCCCCAGAAA+AGG | - | chr1.1:70127753-70127772 | None:intergenic | 55.0% |
| !! | AACGGTGTTGCAGAGCAAGG+AGG | - | chr1.1:70123617-70123636 | None:intergenic | 55.0% |
| !! | ACGGTGTTGCAGAGCAAGGA+GGG | - | chr1.1:70123616-70123635 | None:intergenic | 55.0% |
| !! | AGTGAGCAAAGTGGTGGTGG+TGG | + | chr1.1:70127904-70127923 | MS.gene88859:CDS | 55.0% |
| !! | TGATGGCGGGAATAGTCGAG+TGG | + | chr1.1:70125260-70125279 | MS.gene88859:CDS | 55.0% |
| ACCCCCGCATCTTGAGCTAC+AGG | - | chr1.1:70126351-70126370 | None:intergenic | 60.0% | |
| ACGTCAGCCTAGCCCAAAGG+AGG | + | chr1.1:70127015-70127034 | MS.gene88859:intron | 60.0% | |
| AGCCTAGCCCAAAGGAGGGT+TGG | + | chr1.1:70127020-70127039 | MS.gene88859:intron | 60.0% | |
| CCTGGCCAATGAGCGTGAAC+AGG | + | chr1.1:70125473-70125492 | MS.gene88859:CDS | 60.0% | |
| CCTGTTCACGCTCATTGGCC+AGG | - | chr1.1:70125476-70125495 | None:intergenic | 60.0% | |
| CGTCAGCCTAGCCCAAAGGA+GGG | + | chr1.1:70127016-70127035 | MS.gene88859:intron | 60.0% | |
| GACCAACCCTCCTTTGGGCT+AGG | - | chr1.1:70127025-70127044 | None:intergenic | 60.0% | |
| GCCTGTAGCTCAAGATGCGG+GGG | + | chr1.1:70126347-70126366 | MS.gene88859:intron | 60.0% | |
| GCGCAGACGAACCTTGCTCA+AGG | + | chr1.1:70123554-70123573 | MS.gene88859:CDS | 60.0% | |
| !! | TCACTCTCTGGAACCGCCTC+AGG | - | chr1.1:70127889-70127908 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 70123546 | 70127939 | 70123546 | ID=MS.gene88859 |
| chr1.1 | mRNA | 70123546 | 70127939 | 70123546 | ID=MS.gene88859.t1;Parent=MS.gene88859 |
| chr1.1 | exon | 70123546 | 70123598 | 70123546 | ID=MS.gene88859.t1.exon1;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70123546 | 70123598 | 70123546 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| chr1.1 | exon | 70123704 | 70123730 | 70123704 | ID=MS.gene88859.t1.exon2;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70123704 | 70123730 | 70123704 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| chr1.1 | exon | 70124109 | 70124208 | 70124109 | ID=MS.gene88859.t1.exon3;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70124109 | 70124208 | 70124109 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| chr1.1 | exon | 70124320 | 70124466 | 70124320 | ID=MS.gene88859.t1.exon4;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70124320 | 70124466 | 70124320 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| chr1.1 | exon | 70125201 | 70125281 | 70125201 | ID=MS.gene88859.t1.exon5;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70125201 | 70125281 | 70125201 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| chr1.1 | exon | 70125354 | 70125499 | 70125354 | ID=MS.gene88859.t1.exon6;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70125354 | 70125499 | 70125354 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| chr1.1 | exon | 70127870 | 70127939 | 70127870 | ID=MS.gene88859.t1.exon7;Parent=MS.gene88859.t1 |
| chr1.1 | CDS | 70127870 | 70127939 | 70127870 | ID=cds.MS.gene88859.t1;Parent=MS.gene88859.t1 |
| Gene Sequence |
| Protein sequence |
