Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97782.t1 | GAU16557.1 | 97.7 | 219 | 4 | 1 | 1 | 219 | 1 | 218 | 2.40E-112 | 414.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97782.t1 | P19892 | 83.8 | 216 | 34 | 1 | 4 | 219 | 2 | 216 | 3.5e-96 | 352.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97782.t1 | A0A1S2Z5S9 | 96.3 | 219 | 8 | 0 | 1 | 219 | 1 | 219 | 3.0e-112 | 414.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049378 | MS.gene97782 | 0.84788 | 8.74E-60 | -1.69E-46 |
MS.gene049382 | MS.gene97782 | 0.832539 | 8.93E-56 | -1.69E-46 |
MS.gene049501 | MS.gene97782 | 0.805584 | 1.24E-49 | -1.69E-46 |
MS.gene049756 | MS.gene97782 | 0.81212 | 4.97E-51 | -1.69E-46 |
MS.gene050226 | MS.gene97782 | 0.803704 | 3.07E-49 | -1.69E-46 |
MS.gene050227 | MS.gene97782 | 0.807587 | 4.70E-50 | -1.69E-46 |
MS.gene050228 | MS.gene97782 | 0.814995 | 1.16E-51 | -1.69E-46 |
MS.gene050442 | MS.gene97782 | 0.820403 | 6.99E-53 | -1.69E-46 |
MS.gene050629 | MS.gene97782 | -0.813968 | 1.96E-51 | -1.69E-46 |
MS.gene050719 | MS.gene97782 | 0.817449 | 3.28E-52 | -1.69E-46 |
MS.gene050721 | MS.gene97782 | 0.813502 | 2.48E-51 | -1.69E-46 |
MS.gene050724 | MS.gene97782 | 0.800434 | 1.44E-48 | -1.69E-46 |
MS.gene050762 | MS.gene97782 | 0.800496 | 1.40E-48 | -1.69E-46 |
MS.gene050780 | MS.gene97782 | 0.804 | 2.67E-49 | -1.69E-46 |
MS.gene050807 | MS.gene97782 | 0.813522 | 2.45E-51 | -1.69E-46 |
MS.gene050824 | MS.gene97782 | 0.801424 | 9.06E-49 | -1.69E-46 |
MS.gene052176 | MS.gene97782 | 0.832952 | 7.05E-56 | -1.69E-46 |
MS.gene052302 | MS.gene97782 | 0.838261 | 3.19E-57 | -1.69E-46 |
MS.gene052376 | MS.gene97782 | 0.840068 | 1.09E-57 | -1.69E-46 |
MS.gene052389 | MS.gene97782 | 0.802197 | 6.29E-49 | -1.69E-46 |
MS.gene052665 | MS.gene97782 | 0.80073 | 1.26E-48 | -1.69E-46 |
MS.gene052856 | MS.gene97782 | 0.814783 | 1.29E-51 | -1.69E-46 |
MS.gene052858 | MS.gene97782 | 0.828244 | 1.00E-54 | -1.69E-46 |
MS.gene052860 | MS.gene97782 | 0.820646 | 6.15E-53 | -1.69E-46 |
MS.gene053630 | MS.gene97782 | 0.816529 | 5.28E-52 | -1.69E-46 |
MS.gene05434 | MS.gene97782 | 0.802588 | 5.23E-49 | -1.69E-46 |
MS.gene054379 | MS.gene97782 | 0.828417 | 9.10E-55 | -1.69E-46 |
MS.gene054468 | MS.gene97782 | 0.80506 | 1.60E-49 | -1.69E-46 |
MS.gene054472 | MS.gene97782 | 0.824465 | 7.96E-54 | -1.69E-46 |
MS.gene05462 | MS.gene97782 | 0.804081 | 2.56E-49 | -1.69E-46 |
MS.gene054930 | MS.gene97782 | 0.841782 | 3.86E-58 | -1.69E-46 |
MS.gene056069 | MS.gene97782 | -0.800797 | 1.22E-48 | -1.69E-46 |
MS.gene056506 | MS.gene97782 | 0.802272 | 6.07E-49 | -1.69E-46 |
MS.gene056873 | MS.gene97782 | 0.805832 | 1.10E-49 | -1.69E-46 |
MS.gene057026 | MS.gene97782 | 0.808624 | 2.83E-50 | -1.69E-46 |
MS.gene057194 | MS.gene97782 | 0.805116 | 1.56E-49 | -1.69E-46 |
MS.gene05761 | MS.gene97782 | 0.810913 | 9.10E-51 | -1.69E-46 |
MS.gene057869 | MS.gene97782 | 0.807728 | 4.39E-50 | -1.69E-46 |
MS.gene05795 | MS.gene97782 | 0.812563 | 3.98E-51 | -1.69E-46 |
MS.gene058084 | MS.gene97782 | 0.806588 | 7.65E-50 | -1.69E-46 |
MS.gene058146 | MS.gene97782 | 0.811642 | 6.32E-51 | -1.69E-46 |
MS.gene058749 | MS.gene97782 | 0.812345 | 4.44E-51 | -1.69E-46 |
MS.gene059128 | MS.gene97782 | 0.809395 | 1.93E-50 | -1.69E-46 |
MS.gene059713 | MS.gene97782 | 0.80268 | 5.00E-49 | -1.69E-46 |
MS.gene060167 | MS.gene97782 | 0.816957 | 4.23E-52 | -1.69E-46 |
MS.gene060322 | MS.gene97782 | 0.804821 | 1.80E-49 | -1.69E-46 |
MS.gene060683 | MS.gene97782 | 0.811792 | 5.86E-51 | -1.69E-46 |
MS.gene060685 | MS.gene97782 | 0.813348 | 2.68E-51 | -1.69E-46 |
MS.gene060918 | MS.gene97782 | 0.84701 | 1.52E-59 | -1.69E-46 |
MS.gene060998 | MS.gene97782 | 0.812877 | 3.40E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97782.t1 | MTR_7g405790 | 99.545 | 220 | 0 | 1 | 1 | 219 | 1 | 220 | 1.58e-160 | 442 |
MS.gene97782.t1 | MTR_7g051940 | 80.193 | 207 | 38 | 1 | 13 | 219 | 12 | 215 | 7.61e-120 | 339 |
MS.gene97782.t1 | MTR_1g078200 | 62.555 | 227 | 73 | 2 | 1 | 219 | 1 | 223 | 1.95e-97 | 283 |
MS.gene97782.t1 | MTR_8g089985 | 60.914 | 197 | 66 | 1 | 12 | 208 | 15 | 200 | 8.39e-85 | 251 |
MS.gene97782.t1 | MTR_1g052475 | 55.399 | 213 | 86 | 3 | 12 | 218 | 13 | 222 | 6.33e-84 | 249 |
MS.gene97782.t1 | MTR_4g064897 | 55.288 | 208 | 90 | 1 | 12 | 219 | 10 | 214 | 7.86e-84 | 248 |
MS.gene97782.t1 | MTR_3g086980 | 55.660 | 212 | 85 | 2 | 12 | 218 | 14 | 221 | 3.33e-83 | 247 |
MS.gene97782.t1 | MTR_2g075950 | 65.318 | 173 | 60 | 0 | 12 | 184 | 11 | 183 | 5.77e-82 | 243 |
MS.gene97782.t1 | MTR_2g083860 | 58.173 | 208 | 86 | 1 | 12 | 219 | 11 | 217 | 1.46e-81 | 243 |
MS.gene97782.t1 | MTR_0262s0050 | 61.932 | 176 | 67 | 0 | 12 | 187 | 13 | 188 | 7.44e-81 | 241 |
MS.gene97782.t1 | MTR_8g036220 | 54.378 | 217 | 91 | 2 | 10 | 219 | 12 | 227 | 1.33e-80 | 240 |
MS.gene97782.t1 | MTR_2g005510 | 60.428 | 187 | 73 | 1 | 1 | 186 | 1 | 187 | 3.67e-80 | 239 |
MS.gene97782.t1 | MTR_4g079350 | 56.731 | 208 | 88 | 1 | 12 | 219 | 11 | 216 | 3.87e-80 | 239 |
MS.gene97782.t1 | MTR_3g069510 | 54.327 | 208 | 93 | 1 | 12 | 219 | 10 | 215 | 7.78e-80 | 238 |
MS.gene97782.t1 | MTR_4g088090 | 56.731 | 208 | 88 | 1 | 12 | 219 | 11 | 216 | 9.69e-80 | 238 |
MS.gene97782.t1 | MTR_2g090865 | 58.654 | 208 | 83 | 2 | 12 | 219 | 9 | 213 | 2.59e-79 | 236 |
MS.gene97782.t1 | MTR_2g014990 | 56.731 | 208 | 88 | 1 | 12 | 219 | 11 | 216 | 3.88e-79 | 236 |
MS.gene97782.t1 | MTR_8g027220 | 51.208 | 207 | 100 | 1 | 12 | 217 | 24 | 230 | 1.43e-72 | 220 |
MS.gene97782.t1 | MTR_8g107070 | 55.851 | 188 | 81 | 1 | 12 | 199 | 12 | 197 | 8.93e-66 | 204 |
MS.gene97782.t1 | MTR_6g079550 | 48.558 | 208 | 105 | 1 | 12 | 219 | 10 | 215 | 1.90e-65 | 201 |
MS.gene97782.t1 | MTR_7g117910 | 54.430 | 158 | 72 | 0 | 12 | 169 | 18 | 175 | 2.87e-61 | 191 |
MS.gene97782.t1 | MTR_2g027660 | 43.541 | 209 | 114 | 2 | 13 | 219 | 5 | 211 | 9.31e-59 | 184 |
MS.gene97782.t1 | MTR_6g021790 | 43.810 | 210 | 114 | 2 | 12 | 219 | 4 | 211 | 2.21e-57 | 181 |
MS.gene97782.t1 | MTR_7g081700 | 48.276 | 174 | 90 | 0 | 12 | 185 | 6 | 179 | 1.60e-53 | 171 |
MS.gene97782.t1 | MTR_8g031870 | 51.923 | 156 | 75 | 0 | 13 | 168 | 5 | 160 | 5.93e-53 | 169 |
MS.gene97782.t1 | MTR_2g005500 | 42.927 | 205 | 112 | 1 | 1 | 205 | 1 | 200 | 7.24e-53 | 169 |
MS.gene97782.t1 | MTR_8g031680 | 42.512 | 207 | 118 | 1 | 13 | 219 | 5 | 210 | 1.66e-51 | 166 |
MS.gene97782.t1 | MTR_8g031660 | 48.503 | 167 | 86 | 0 | 13 | 179 | 5 | 171 | 1.94e-51 | 166 |
MS.gene97782.t1 | MTR_1g115325 | 39.904 | 208 | 118 | 3 | 12 | 218 | 13 | 214 | 4.44e-51 | 165 |
MS.gene97782.t1 | MTR_1g068740 | 40.385 | 208 | 117 | 4 | 12 | 218 | 13 | 214 | 2.28e-50 | 163 |
MS.gene97782.t1 | MTR_1g068730 | 40.385 | 208 | 117 | 4 | 12 | 218 | 13 | 214 | 3.63e-50 | 162 |
MS.gene97782.t1 | MTR_8g006970 | 50.955 | 157 | 77 | 0 | 12 | 168 | 6 | 162 | 4.01e-50 | 161 |
MS.gene97782.t1 | MTR_8g006970 | 50.955 | 157 | 77 | 0 | 12 | 168 | 20 | 176 | 5.02e-50 | 162 |
MS.gene97782.t1 | MTR_7g100020 | 44.848 | 165 | 90 | 1 | 12 | 175 | 13 | 177 | 4.42e-48 | 157 |
MS.gene97782.t1 | MTR_8g031830 | 49.020 | 153 | 78 | 0 | 13 | 165 | 5 | 157 | 2.43e-47 | 155 |
MS.gene97782.t1 | MTR_2g096550 | 36.842 | 209 | 121 | 4 | 12 | 218 | 13 | 212 | 4.90e-47 | 154 |
MS.gene97782.t1 | MTR_1g094220 | 43.182 | 176 | 98 | 2 | 2 | 175 | 18 | 193 | 8.99e-47 | 153 |
MS.gene97782.t1 | MTR_1g094220 | 42.162 | 185 | 105 | 2 | 2 | 184 | 18 | 202 | 1.14e-46 | 153 |
MS.gene97782.t1 | MTR_1g094220 | 43.931 | 173 | 95 | 2 | 2 | 172 | 18 | 190 | 2.17e-46 | 152 |
MS.gene97782.t1 | MTR_1g094220 | 44.444 | 171 | 93 | 2 | 2 | 170 | 18 | 188 | 7.62e-46 | 152 |
MS.gene97782.t1 | MTR_4g063160 | 38.498 | 213 | 115 | 6 | 12 | 218 | 13 | 215 | 2.36e-44 | 147 |
MS.gene97782.t1 | MTR_2g102060 | 36.765 | 204 | 113 | 2 | 16 | 219 | 12 | 199 | 4.40e-44 | 146 |
MS.gene97782.t1 | MTR_3g064390 | 41.875 | 160 | 93 | 0 | 16 | 175 | 12 | 171 | 9.39e-44 | 145 |
MS.gene97782.t1 | MTR_8g093740 | 43.860 | 171 | 93 | 3 | 12 | 180 | 11 | 180 | 1.39e-42 | 143 |
MS.gene97782.t1 | MTR_4g099470 | 46.479 | 142 | 76 | 0 | 45 | 186 | 15 | 156 | 6.81e-42 | 140 |
MS.gene97782.t1 | MTR_5g076590 | 40.000 | 160 | 96 | 0 | 16 | 175 | 12 | 171 | 2.03e-41 | 139 |
MS.gene97782.t1 | MTR_3g087160 | 38.854 | 157 | 96 | 0 | 15 | 171 | 10 | 166 | 6.15e-41 | 139 |
MS.gene97782.t1 | MTR_8g090215 | 34.975 | 203 | 127 | 2 | 15 | 217 | 10 | 207 | 8.28e-41 | 138 |
MS.gene97782.t1 | MTR_7g103070 | 45.833 | 168 | 89 | 2 | 15 | 180 | 17 | 184 | 9.85e-41 | 138 |
MS.gene97782.t1 | MTR_1g068740 | 43.056 | 144 | 74 | 1 | 12 | 155 | 13 | 148 | 1.88e-40 | 137 |
MS.gene97782.t1 | MTR_5g013900 | 39.490 | 157 | 95 | 0 | 15 | 171 | 10 | 166 | 2.33e-40 | 137 |
MS.gene97782.t1 | MTR_1g068730 | 45.385 | 130 | 71 | 0 | 12 | 141 | 13 | 142 | 2.76e-40 | 136 |
MS.gene97782.t1 | MTR_3g096350 | 43.275 | 171 | 94 | 3 | 12 | 180 | 10 | 179 | 4.18e-40 | 136 |
MS.gene97782.t1 | MTR_8g103550 | 39.286 | 168 | 101 | 1 | 16 | 182 | 11 | 178 | 2.15e-39 | 134 |
MS.gene97782.t1 | MTR_1g062760 | 46.012 | 163 | 85 | 3 | 15 | 175 | 15 | 176 | 5.70e-39 | 134 |
MS.gene97782.t1 | MTR_1g029450 | 42.105 | 171 | 96 | 3 | 12 | 180 | 15 | 184 | 1.14e-38 | 133 |
MS.gene97782.t1 | MTR_4g098950 | 37.580 | 157 | 98 | 0 | 15 | 171 | 10 | 166 | 3.04e-38 | 132 |
MS.gene97782.t1 | MTR_8g092020 | 41.317 | 167 | 91 | 3 | 14 | 173 | 12 | 178 | 1.28e-37 | 130 |
MS.gene97782.t1 | MTR_1g090717 | 44.444 | 171 | 92 | 3 | 2 | 169 | 3 | 173 | 5.28e-37 | 129 |
MS.gene97782.t1 | MTR_1g097420 | 39.535 | 172 | 97 | 3 | 14 | 178 | 8 | 179 | 1.87e-36 | 127 |
MS.gene97782.t1 | MTR_2g101890 | 37.209 | 172 | 101 | 3 | 14 | 178 | 10 | 181 | 4.26e-35 | 124 |
MS.gene97782.t1 | MTR_4g069850 | 36.310 | 168 | 100 | 3 | 14 | 174 | 8 | 175 | 7.11e-35 | 123 |
MS.gene97782.t1 | MTR_4g012940 | 36.628 | 172 | 102 | 3 | 14 | 178 | 8 | 179 | 3.54e-34 | 121 |
MS.gene97782.t1 | MTR_3g064390 | 41.600 | 125 | 73 | 0 | 16 | 140 | 12 | 136 | 1.04e-32 | 116 |
MS.gene97782.t1 | MTR_6g039490 | 38.372 | 172 | 99 | 3 | 14 | 178 | 8 | 179 | 1.46e-32 | 117 |
MS.gene97782.t1 | MTR_3g096350 | 46.154 | 130 | 67 | 3 | 12 | 139 | 10 | 138 | 2.37e-32 | 115 |
MS.gene97782.t1 | MTR_3g096350 | 47.107 | 121 | 61 | 3 | 12 | 130 | 10 | 129 | 1.66e-31 | 113 |
MS.gene97782.t1 | MTR_1g097420 | 36.994 | 173 | 100 | 4 | 13 | 178 | 36 | 206 | 1.60e-30 | 112 |
MS.gene97782.t1 | MTR_8g093740 | 42.029 | 138 | 78 | 2 | 45 | 180 | 10 | 147 | 1.68e-30 | 111 |
MS.gene97782.t1 | MTR_7g103070 | 46.457 | 127 | 66 | 2 | 56 | 180 | 2 | 128 | 3.05e-29 | 107 |
MS.gene97782.t1 | MTR_2g005500 | 30.928 | 194 | 94 | 1 | 12 | 205 | 7 | 160 | 3.20e-24 | 94.4 |
MS.gene97782.t1 | MTR_3g107717 | 27.551 | 196 | 138 | 4 | 15 | 209 | 14 | 206 | 1.30e-22 | 91.7 |
MS.gene97782.t1 | MTR_3g107713 | 31.056 | 161 | 108 | 3 | 15 | 175 | 14 | 171 | 1.50e-22 | 91.7 |
MS.gene97782.t1 | MTR_3g107707 | 31.056 | 161 | 108 | 3 | 15 | 175 | 14 | 171 | 1.59e-22 | 91.7 |
MS.gene97782.t1 | MTR_8g031810 | 40.777 | 103 | 47 | 1 | 13 | 115 | 5 | 93 | 3.40e-20 | 82.0 |
MS.gene97782.t1 | MTR_1452s0010 | 45.570 | 79 | 43 | 0 | 34 | 112 | 1 | 79 | 3.54e-20 | 82.0 |
MS.gene97782.t1 | MTR_1g069245 | 41.593 | 113 | 62 | 2 | 9 | 121 | 91 | 199 | 2.96e-19 | 82.8 |
MS.gene97782.t1 | MTR_2g090875 | 30.460 | 174 | 107 | 5 | 14 | 175 | 6 | 177 | 1.94e-18 | 80.1 |
MS.gene97782.t1 | MTR_3g078260 | 29.282 | 181 | 114 | 5 | 14 | 182 | 8 | 186 | 1.23e-17 | 78.2 |
MS.gene97782.t1 | MTR_4g073250 | 27.624 | 181 | 117 | 5 | 14 | 182 | 6 | 184 | 6.30e-17 | 76.3 |
MS.gene97782.t1 | MTR_5g022600 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 8.00e-17 | 75.9 |
MS.gene97782.t1 | MTR_8g075240 | 30.682 | 176 | 104 | 6 | 14 | 175 | 6 | 177 | 8.42e-17 | 75.9 |
MS.gene97782.t1 | MTR_2g078000 | 59.184 | 49 | 20 | 0 | 75 | 123 | 46 | 94 | 9.19e-17 | 73.2 |
MS.gene97782.t1 | MTR_6g087980 | 29.282 | 181 | 114 | 5 | 14 | 182 | 6 | 184 | 1.82e-16 | 75.1 |
MS.gene97782.t1 | MTR_4g088055 | 29.070 | 172 | 108 | 5 | 14 | 173 | 6 | 175 | 2.47e-16 | 74.7 |
MS.gene97782.t1 | MTR_1686s0010 | 34.783 | 92 | 60 | 0 | 34 | 125 | 1 | 92 | 2.95e-16 | 71.6 |
MS.gene97782.t1 | MTR_4g113620 | 25.301 | 166 | 112 | 4 | 15 | 180 | 14 | 167 | 7.76e-16 | 73.6 |
MS.gene97782.t1 | MTR_1g059590 | 29.940 | 167 | 108 | 4 | 17 | 182 | 431 | 589 | 8.73e-13 | 67.0 |
MS.gene97782.t1 | MTR_1g059590 | 29.940 | 167 | 108 | 4 | 17 | 182 | 398 | 556 | 8.73e-13 | 67.0 |
MS.gene97782.t1 | MTR_5g092060 | 23.214 | 168 | 123 | 2 | 15 | 177 | 105 | 271 | 1.34e-12 | 65.9 |
MS.gene97782.t1 | MTR_3g053480 | 59.574 | 47 | 19 | 0 | 10 | 56 | 12 | 58 | 1.45e-12 | 61.2 |
MS.gene97782.t1 | MTR_8g099250 | 64.444 | 45 | 16 | 0 | 10 | 54 | 12 | 56 | 2.77e-12 | 60.5 |
MS.gene97782.t1 | MTR_2g078560 | 55.556 | 45 | 20 | 0 | 76 | 120 | 54 | 98 | 2.89e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97782.t1 | AT2G31680 | 83.410 | 217 | 34 | 2 | 4 | 219 | 2 | 217 | 2.53e-131 | 369 |
MS.gene97782.t1 | AT1G05810 | 83.796 | 216 | 34 | 1 | 4 | 219 | 2 | 216 | 3.55e-131 | 368 |
MS.gene97782.t1 | AT1G05810 | 83.796 | 216 | 34 | 1 | 4 | 219 | 48 | 262 | 5.05e-131 | 369 |
MS.gene97782.t1 | AT2G43130 | 81.019 | 216 | 37 | 1 | 4 | 219 | 2 | 213 | 6.56e-127 | 357 |
MS.gene97782.t1 | AT3G07410 | 78.571 | 210 | 44 | 1 | 10 | 219 | 8 | 216 | 1.00e-117 | 334 |
MS.gene97782.t1 | AT5G47520 | 63.801 | 221 | 70 | 4 | 4 | 219 | 5 | 220 | 9.48e-96 | 278 |
MS.gene97782.t1 | AT1G07410 | 55.769 | 208 | 88 | 2 | 12 | 219 | 10 | 213 | 1.57e-83 | 247 |
MS.gene97782.t1 | AT3G12160 | 62.500 | 176 | 66 | 0 | 12 | 187 | 13 | 188 | 1.08e-82 | 245 |
MS.gene97782.t1 | AT5G65270 | 64.740 | 173 | 61 | 0 | 12 | 184 | 15 | 187 | 1.20e-82 | 246 |
MS.gene97782.t1 | AT4G18430 | 56.938 | 209 | 86 | 2 | 12 | 219 | 11 | 216 | 1.29e-82 | 245 |
MS.gene97782.t1 | AT5G47960 | 65.318 | 173 | 60 | 0 | 12 | 184 | 13 | 185 | 1.86e-82 | 245 |
MS.gene97782.t1 | AT5G60860 | 57.692 | 208 | 86 | 1 | 12 | 219 | 11 | 216 | 7.04e-82 | 243 |
MS.gene97782.t1 | AT1G09630 | 53.365 | 208 | 95 | 1 | 12 | 219 | 10 | 215 | 1.23e-81 | 243 |
MS.gene97782.t1 | AT4G39990 | 52.607 | 211 | 94 | 2 | 12 | 219 | 15 | 222 | 1.88e-81 | 242 |
MS.gene97782.t1 | AT5G59150 | 63.158 | 171 | 63 | 0 | 12 | 182 | 10 | 180 | 4.92e-81 | 241 |
MS.gene97782.t1 | AT1G16920 | 58.173 | 208 | 84 | 2 | 12 | 219 | 11 | 215 | 1.09e-80 | 240 |
MS.gene97782.t1 | AT5G45750 | 55.769 | 208 | 89 | 2 | 12 | 219 | 11 | 215 | 5.50e-80 | 238 |
MS.gene97782.t1 | AT4G18800 | 63.429 | 175 | 64 | 0 | 12 | 186 | 11 | 185 | 6.41e-80 | 238 |
MS.gene97782.t1 | AT3G46830 | 62.573 | 171 | 64 | 0 | 12 | 182 | 10 | 180 | 6.77e-80 | 238 |
MS.gene97782.t1 | AT3G46830 | 62.573 | 171 | 64 | 0 | 12 | 182 | 10 | 180 | 6.77e-80 | 238 |
MS.gene97782.t1 | AT1G06400 | 58.470 | 183 | 76 | 0 | 12 | 194 | 11 | 193 | 1.76e-78 | 234 |
MS.gene97782.t1 | AT1G28550 | 54.808 | 208 | 93 | 1 | 12 | 219 | 11 | 217 | 3.17e-78 | 234 |
MS.gene97782.t1 | AT3G15060 | 54.808 | 208 | 92 | 1 | 12 | 219 | 11 | 216 | 5.35e-78 | 233 |
MS.gene97782.t1 | AT2G33870 | 53.846 | 208 | 95 | 1 | 12 | 219 | 11 | 217 | 1.45e-77 | 232 |
MS.gene97782.t1 | AT1G73640 | 58.140 | 172 | 72 | 0 | 12 | 183 | 11 | 182 | 3.59e-71 | 217 |
MS.gene97782.t1 | AT1G18200 | 57.803 | 173 | 73 | 0 | 12 | 184 | 11 | 183 | 3.33e-70 | 214 |
MS.gene97782.t1 | AT1G01200 | 51.429 | 210 | 98 | 3 | 12 | 217 | 26 | 235 | 8.67e-69 | 211 |
MS.gene97782.t1 | AT4G17170 | 43.541 | 209 | 114 | 2 | 13 | 219 | 5 | 211 | 1.29e-58 | 184 |
MS.gene97782.t1 | AT4G17160 | 44.175 | 206 | 109 | 2 | 13 | 218 | 5 | 204 | 5.17e-57 | 179 |
MS.gene97782.t1 | AT4G35860 | 47.126 | 174 | 92 | 0 | 12 | 185 | 4 | 177 | 2.85e-56 | 178 |
MS.gene97782.t1 | AT5G59150 | 60.630 | 127 | 50 | 0 | 56 | 182 | 3 | 129 | 4.09e-56 | 176 |
MS.gene97782.t1 | AT3G11730 | 48.780 | 164 | 84 | 0 | 12 | 175 | 6 | 169 | 6.69e-51 | 164 |
MS.gene97782.t1 | AT1G02130 | 49.682 | 157 | 79 | 0 | 12 | 168 | 6 | 162 | 1.91e-50 | 163 |
MS.gene97782.t1 | AT4G17530 | 49.045 | 157 | 80 | 0 | 12 | 168 | 6 | 162 | 2.48e-50 | 162 |
MS.gene97782.t1 | AT3G53610 | 39.904 | 208 | 118 | 4 | 12 | 218 | 13 | 214 | 2.23e-49 | 160 |
MS.gene97782.t1 | AT3G53610 | 39.904 | 208 | 118 | 4 | 12 | 218 | 13 | 214 | 2.23e-49 | 160 |
MS.gene97782.t1 | AT3G53610 | 39.904 | 208 | 118 | 4 | 12 | 218 | 13 | 214 | 2.23e-49 | 160 |
MS.gene97782.t1 | AT3G09900 | 40.191 | 209 | 119 | 3 | 12 | 219 | 13 | 216 | 8.77e-49 | 159 |
MS.gene97782.t1 | AT3G46060 | 39.423 | 208 | 119 | 4 | 12 | 218 | 13 | 214 | 1.33e-48 | 159 |
MS.gene97782.t1 | AT3G46060 | 39.423 | 208 | 119 | 4 | 12 | 218 | 13 | 214 | 1.33e-48 | 159 |
MS.gene97782.t1 | AT3G46060 | 39.423 | 208 | 119 | 4 | 12 | 218 | 13 | 214 | 1.33e-48 | 159 |
MS.gene97782.t1 | AT5G47200 | 48.408 | 157 | 81 | 0 | 12 | 168 | 6 | 162 | 2.15e-48 | 157 |
MS.gene97782.t1 | AT5G59840 | 38.942 | 208 | 120 | 4 | 12 | 218 | 13 | 214 | 3.28e-48 | 157 |
MS.gene97782.t1 | AT5G03520 | 40.191 | 209 | 117 | 4 | 12 | 219 | 13 | 214 | 7.07e-48 | 157 |
MS.gene97782.t1 | AT3G54840 | 44.767 | 172 | 90 | 2 | 16 | 186 | 35 | 202 | 3.25e-46 | 152 |
MS.gene97782.t1 | AT3G54840 | 44.444 | 171 | 90 | 2 | 17 | 186 | 2 | 168 | 6.46e-46 | 150 |
MS.gene97782.t1 | AT3G54840 | 47.097 | 155 | 81 | 1 | 16 | 169 | 35 | 189 | 9.34e-46 | 150 |
MS.gene97782.t1 | AT4G19640 | 41.250 | 160 | 94 | 0 | 16 | 175 | 12 | 171 | 7.89e-45 | 148 |
MS.gene97782.t1 | AT5G45130 | 39.216 | 204 | 109 | 4 | 16 | 219 | 12 | 200 | 3.26e-44 | 147 |
MS.gene97782.t1 | AT5G45130 | 39.109 | 202 | 108 | 4 | 18 | 219 | 22 | 208 | 3.57e-43 | 144 |
MS.gene97782.t1 | AT1G43890 | 46.199 | 171 | 89 | 3 | 12 | 180 | 11 | 180 | 1.76e-42 | 143 |
MS.gene97782.t1 | AT1G43890 | 46.199 | 171 | 89 | 3 | 12 | 180 | 11 | 180 | 1.76e-42 | 143 |
MS.gene97782.t1 | AT1G43890 | 46.199 | 171 | 89 | 3 | 12 | 180 | 11 | 180 | 1.76e-42 | 143 |
MS.gene97782.t1 | AT4G35860 | 47.656 | 128 | 67 | 0 | 58 | 185 | 4 | 131 | 5.47e-42 | 140 |
MS.gene97782.t1 | AT5G10260 | 39.490 | 157 | 95 | 0 | 15 | 171 | 10 | 166 | 2.02e-41 | 140 |
MS.gene97782.t1 | AT2G44610 | 36.275 | 204 | 124 | 3 | 15 | 217 | 10 | 208 | 2.28e-40 | 137 |
MS.gene97782.t1 | AT2G22290 | 38.854 | 157 | 96 | 0 | 15 | 171 | 10 | 166 | 3.45e-40 | 137 |
MS.gene97782.t1 | AT4G39890 | 37.975 | 158 | 97 | 1 | 15 | 171 | 10 | 167 | 3.74e-39 | 134 |
MS.gene97782.t1 | AT5G03530 | 45.062 | 162 | 86 | 3 | 10 | 169 | 9 | 169 | 6.02e-38 | 131 |
MS.gene97782.t1 | AT5G03530 | 45.062 | 162 | 86 | 3 | 10 | 169 | 9 | 169 | 6.02e-38 | 131 |
MS.gene97782.t1 | AT5G64990 | 38.961 | 154 | 94 | 0 | 15 | 168 | 8 | 161 | 6.34e-38 | 131 |
MS.gene97782.t1 | AT5G03520 | 38.372 | 172 | 98 | 4 | 49 | 219 | 40 | 204 | 3.55e-37 | 129 |
MS.gene97782.t1 | AT2G21880 | 41.975 | 162 | 87 | 3 | 14 | 168 | 9 | 170 | 4.36e-37 | 129 |
MS.gene97782.t1 | AT1G22740 | 41.317 | 167 | 91 | 3 | 14 | 173 | 8 | 174 | 6.73e-37 | 128 |
MS.gene97782.t1 | AT1G52280 | 37.791 | 172 | 100 | 3 | 14 | 178 | 8 | 179 | 1.69e-35 | 125 |
MS.gene97782.t1 | AT5G64990 | 35.673 | 171 | 103 | 1 | 15 | 178 | 8 | 178 | 3.27e-35 | 124 |
MS.gene97782.t1 | AT3G18820 | 38.095 | 168 | 97 | 3 | 14 | 174 | 8 | 175 | 3.51e-35 | 124 |
MS.gene97782.t1 | AT4G09720 | 38.953 | 172 | 98 | 3 | 14 | 178 | 8 | 179 | 1.50e-34 | 122 |
MS.gene97782.t1 | AT4G19640 | 37.580 | 157 | 97 | 1 | 16 | 172 | 12 | 167 | 7.97e-34 | 120 |
MS.gene97782.t1 | AT4G09720 | 38.418 | 177 | 97 | 4 | 14 | 178 | 8 | 184 | 8.01e-34 | 120 |
MS.gene97782.t1 | AT3G16100 | 37.209 | 172 | 101 | 3 | 14 | 178 | 8 | 179 | 1.64e-33 | 119 |
MS.gene97782.t1 | AT4G19640 | 39.231 | 130 | 79 | 0 | 16 | 145 | 12 | 141 | 2.32e-33 | 117 |
MS.gene97782.t1 | AT5G46025 | 55.660 | 106 | 46 | 1 | 76 | 180 | 6 | 111 | 5.38e-33 | 115 |
MS.gene97782.t1 | AT4G09720 | 36.612 | 183 | 98 | 3 | 14 | 178 | 8 | 190 | 1.20e-32 | 117 |
MS.gene97782.t1 | AT3G09910 | 39.535 | 172 | 101 | 3 | 10 | 179 | 9 | 179 | 4.01e-32 | 115 |
MS.gene97782.t1 | AT3G09910 | 39.535 | 172 | 101 | 3 | 10 | 179 | 9 | 179 | 4.01e-32 | 115 |
MS.gene97782.t1 | AT1G49300 | 37.654 | 162 | 94 | 3 | 14 | 168 | 8 | 169 | 5.40e-32 | 115 |
MS.gene97782.t1 | AT1G49300 | 37.654 | 162 | 94 | 3 | 14 | 168 | 8 | 169 | 5.40e-32 | 115 |
MS.gene97782.t1 | AT3G09910 | 35.648 | 216 | 113 | 5 | 10 | 219 | 9 | 204 | 9.18e-32 | 115 |
MS.gene97782.t1 | AT3G09910 | 35.648 | 216 | 113 | 5 | 10 | 219 | 9 | 204 | 9.18e-32 | 115 |
MS.gene97782.t1 | AT3G09910 | 35.648 | 216 | 113 | 5 | 10 | 219 | 9 | 204 | 9.18e-32 | 115 |
MS.gene97782.t1 | AT5G39620 | 34.574 | 188 | 115 | 4 | 11 | 191 | 2 | 188 | 3.19e-30 | 111 |
MS.gene97782.t1 | AT2G21880 | 40.000 | 145 | 80 | 3 | 31 | 168 | 1 | 145 | 1.30e-28 | 106 |
MS.gene97782.t1 | AT2G21880 | 40.000 | 145 | 80 | 3 | 31 | 168 | 1 | 145 | 1.30e-28 | 106 |
MS.gene97782.t1 | AT2G21880 | 37.037 | 162 | 87 | 4 | 14 | 168 | 9 | 162 | 3.34e-27 | 103 |
MS.gene97782.t1 | AT4G09720 | 37.931 | 145 | 83 | 3 | 41 | 178 | 1 | 145 | 2.03e-23 | 92.8 |
MS.gene97782.t1 | AT4G09720 | 37.931 | 145 | 83 | 3 | 41 | 178 | 1 | 145 | 2.03e-23 | 92.8 |
MS.gene97782.t1 | AT4G09720 | 37.931 | 145 | 83 | 3 | 41 | 178 | 1 | 145 | 2.03e-23 | 92.8 |
MS.gene97782.t1 | AT5G55080 | 29.814 | 161 | 110 | 3 | 15 | 175 | 14 | 171 | 2.39e-23 | 94.0 |
MS.gene97782.t1 | AT5G20020 | 31.056 | 161 | 108 | 3 | 15 | 175 | 14 | 171 | 1.19e-22 | 92.0 |
MS.gene97782.t1 | AT5G20010 | 31.056 | 161 | 108 | 3 | 15 | 175 | 14 | 171 | 1.83e-22 | 91.7 |
MS.gene97782.t1 | AT5G55190 | 31.056 | 161 | 108 | 3 | 15 | 175 | 14 | 171 | 2.06e-22 | 91.3 |
MS.gene97782.t1 | AT2G44690 | 33.333 | 180 | 106 | 6 | 14 | 181 | 18 | 195 | 3.00e-22 | 90.5 |
MS.gene97782.t1 | AT4G35020 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 1.77e-17 | 77.8 |
MS.gene97782.t1 | AT4G35020 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 1.77e-17 | 77.8 |
MS.gene97782.t1 | AT4G35020 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 1.77e-17 | 77.8 |
MS.gene97782.t1 | AT5G62880 | 29.310 | 174 | 109 | 5 | 14 | 175 | 8 | 179 | 1.80e-17 | 78.2 |
MS.gene97782.t1 | AT5G45970 | 30.233 | 172 | 106 | 6 | 14 | 173 | 6 | 175 | 2.95e-17 | 77.0 |
MS.gene97782.t1 | AT1G75840 | 30.682 | 176 | 104 | 6 | 14 | 175 | 6 | 177 | 9.90e-17 | 75.5 |
MS.gene97782.t1 | AT3G48040 | 28.736 | 174 | 110 | 5 | 14 | 175 | 8 | 179 | 1.07e-16 | 75.9 |
MS.gene97782.t1 | AT4G28950 | 28.492 | 179 | 116 | 5 | 14 | 182 | 6 | 182 | 1.41e-16 | 75.5 |
MS.gene97782.t1 | AT4G35950 | 30.682 | 176 | 104 | 5 | 14 | 175 | 6 | 177 | 1.53e-16 | 75.1 |
MS.gene97782.t1 | AT3G51300 | 30.233 | 172 | 106 | 5 | 16 | 175 | 8 | 177 | 1.68e-16 | 75.1 |
MS.gene97782.t1 | AT2G17800 | 31.250 | 176 | 103 | 6 | 14 | 175 | 6 | 177 | 2.24e-16 | 74.7 |
MS.gene97782.t1 | AT2G17800 | 31.250 | 176 | 103 | 6 | 14 | 175 | 6 | 177 | 2.24e-16 | 74.7 |
MS.gene97782.t1 | AT1G20090 | 28.161 | 174 | 111 | 5 | 14 | 175 | 5 | 176 | 3.50e-16 | 74.3 |
MS.gene97782.t1 | AT5G62880 | 31.655 | 139 | 85 | 4 | 14 | 151 | 8 | 137 | 3.42e-14 | 68.6 |
MS.gene97782.t1 | AT4G08190 | 46.875 | 64 | 31 | 1 | 105 | 168 | 67 | 127 | 6.96e-14 | 66.2 |
MS.gene97782.t1 | AT4G35020 | 33.333 | 114 | 73 | 3 | 16 | 128 | 8 | 119 | 1.61e-13 | 65.9 |
MS.gene97782.t1 | AT4G35020 | 33.333 | 114 | 73 | 3 | 16 | 128 | 8 | 119 | 1.61e-13 | 65.9 |
MS.gene97782.t1 | AT3G48040 | 31.034 | 145 | 90 | 4 | 14 | 157 | 8 | 143 | 1.71e-13 | 66.6 |
Find 36 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGAAGTTAAAGCTCAGATT+TGG | 0.265031 | 7.3:-82056104 | MS.gene97782:CDS |
TTCAACTCCGATCGTTGCTT+TGG | 0.339177 | 7.3:+82056158 | None:intergenic |
TTTCATGGAAACCTCTGCTT+TGG | 0.343525 | 7.3:-82054697 | MS.gene97782:CDS |
AAAATAGCCTTTGCTTTGCT+TGG | 0.356179 | 7.3:+82054530 | None:intergenic |
CCTTGTAAGTGTCTGAGTTC+AGG | 0.385734 | 7.3:+82054604 | None:intergenic |
CTCTTCAAAGTCGTTATAAT+CGG | 0.399662 | 7.3:-82056246 | MS.gene97782:CDS |
AGGCTGAACTATCTGTCAAC+AGG | 0.400489 | 7.3:-82054584 | MS.gene97782:CDS |
AGAAGTTAAAGCTCAGATTT+GGG | 0.412522 | 7.3:-82056103 | MS.gene97782:CDS |
GGTGGGAAACAAGTGTGATT+TGG | 0.440037 | 7.3:-82054781 | MS.gene97782:CDS |
GCTTATTATCGTGGTGCTGT+TGG | 0.462704 | 7.3:-82056042 | MS.gene97782:CDS |
AGCGTATCGTGAGAGGAGAT+TGG | 0.495642 | 7.3:+82056203 | None:intergenic |
AGATATACAACAATGTTAGC+AGG | 0.522828 | 7.3:-82054632 | MS.gene97782:CDS |
GTTACTTCTGCTTATTATCG+TGG | 0.541558 | 7.3:-82056051 | MS.gene97782:CDS |
CCTGAACTCAGACACTTACA+AGG | 0.545261 | 7.3:-82054604 | MS.gene97782:CDS |
AGTTCAGAAGACGAAGGAGG+AGG | 0.552796 | 7.3:-82056279 | MS.gene97782:CDS |
AAAAGTCTTGCGGAATCAGA+AGG | 0.554276 | 7.3:-82054726 | MS.gene97782:CDS |
GCTCAGATTTGGGATACTGC+TGG | 0.571910 | 7.3:-82056093 | MS.gene97782:CDS |
ATAATCGGTGACTCCGCCGT+TGG | 0.575874 | 7.3:-82056231 | MS.gene97782:CDS |
TACGACGGTGGCAATGATGC+TGG | 0.577423 | 7.3:-82054802 | MS.gene97782:CDS |
AGAGATGTGAGCATTGAAGA+AGG | 0.582505 | 7.3:-82054750 | MS.gene97782:CDS |
CGTTGCGAGCGTATCGTGAG+AGG | 0.597765 | 7.3:+82056196 | None:intergenic |
CTTCATTCCAAAGCAACGAT+CGG | 0.608692 | 7.3:-82056165 | MS.gene97782:CDS |
ATTTGTCGAGTCCAAAGCAG+AGG | 0.614933 | 7.3:+82054686 | None:intergenic |
GAGGAGATTGGATTTACCAA+CGG | 0.633949 | 7.3:+82056215 | None:intergenic |
TCTACATCCAAGCAAAGCAA+AGG | 0.634847 | 7.3:-82054537 | MS.gene97782:CDS |
TGAAGAAGGCAAAAGTCTTG+CGG | 0.635809 | 7.3:-82054736 | MS.gene97782:CDS |
TCAAGTTCAGAAGACGAAGG+AGG | 0.656404 | 7.3:-82056282 | MS.gene97782:CDS |
AGGGTCAGTCTTGTTAACAA+TGG | 0.671243 | 7.3:-82054564 | MS.gene97782:CDS |
GGCTGAACTATCTGTCAACA+GGG | 0.674038 | 7.3:-82054583 | MS.gene97782:CDS |
ATACAACAATGTTAGCAGGA+AGG | 0.674114 | 7.3:-82054628 | MS.gene97782:CDS |
GACGGTGGCAATGATGCTGG+TGG | 0.677201 | 7.3:-82054799 | MS.gene97782:CDS |
TGCAGCTCATTGTGATACGA+CGG | 0.705964 | 7.3:-82054817 | MS.gene97782:intron |
AGCTCATTGTGATACGACGG+TGG | 0.708088 | 7.3:-82054814 | MS.gene97782:CDS |
GAGATTGGATTTACCAACGG+CGG | 0.710073 | 7.3:+82056218 | None:intergenic |
ACGGTGGCAATGATGCTGGT+GGG | 0.711154 | 7.3:-82054798 | MS.gene97782:CDS |
ATGTCAAGTTCAGAAGACGA+AGG | 0.732589 | 7.3:-82056285 | MS.gene97782:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGATATATATTTGATTACA+GGG | - | chr7.3:82055087-82055106 | MS.gene97782:intron | 15.0% |
!! | TATGATATATATTTGATTAC+AGG | - | chr7.3:82055086-82055105 | MS.gene97782:intron | 15.0% |
!!! | GTTAATTTATGTTATGTTTT+TGG | - | chr7.3:82054895-82054914 | MS.gene97782:intron | 15.0% |
!! | AGTCTATATATACTTTCTAT+AGG | + | chr7.3:82055225-82055244 | None:intergenic | 20.0% |
!! | TACTAGTATATATCAATGAT+AGG | - | chr7.3:82055346-82055365 | MS.gene97782:intron | 20.0% |
!!! | TTATGTTATGTTTTTGGTTT+TGG | - | chr7.3:82054901-82054920 | MS.gene97782:intron | 20.0% |
! | AAAACTATGCATAATTGCTA+TGG | - | chr7.3:82055859-82055878 | MS.gene97782:intron | 25.0% |
! | AACACTTACTATAAGGAATA+TGG | + | chr7.3:82055715-82055734 | None:intergenic | 25.0% |
! | AAGGGTGGAATTAAATTAAT+TGG | - | chr7.3:82055297-82055316 | MS.gene97782:intron | 25.0% |
! | AAGTATATATAGACTCTGTT+TGG | - | chr7.3:82055230-82055249 | MS.gene97782:intron | 25.0% |
! | AATGTTAAGCACAAATTTGT+AGG | + | chr7.3:82055601-82055620 | None:intergenic | 25.0% |
! | ATAATTGCTATGGTTAATTG+CGG | - | chr7.3:82055869-82055888 | MS.gene97782:intron | 25.0% |
! | ATGTTAAGCACAAATTTGTA+GGG | + | chr7.3:82055600-82055619 | None:intergenic | 25.0% |
! | TAATTAATCTCACATTCCAA+AGG | - | chr7.3:82055010-82055029 | MS.gene97782:intron | 25.0% |
!! | TTTTCACAACACTTACTATA+AGG | + | chr7.3:82055722-82055741 | None:intergenic | 25.0% |
!!! | AGTGCATTTTGAAAACTAAA+AGG | + | chr7.3:82055562-82055581 | None:intergenic | 25.0% |
!!! | ATTATGCATAGTTTTTAGAG+AGG | + | chr7.3:82055854-82055873 | None:intergenic | 25.0% |
!!! | CAATTTCTCCTAGTTTTTAT+AGG | + | chr7.3:82055497-82055516 | None:intergenic | 25.0% |
!!! | GTGCATTTTGAAAACTAAAA+GGG | + | chr7.3:82055561-82055580 | None:intergenic | 25.0% |
!!! | GTTTTTTTTAGTGAGTATAC+AGG | - | chr7.3:82055754-82055773 | MS.gene97782:intron | 25.0% |
AAGAAGTTAAAGCTCAGATT+TGG | - | chr7.3:82054696-82054715 | MS.gene97782:CDS | 30.0% | |
AATGTCTAAGTATAGCTAGA+AGG | - | chr7.3:82055930-82055949 | MS.gene97782:intron | 30.0% | |
AGAAGTTAAAGCTCAGATTT+GGG | - | chr7.3:82054697-82054716 | MS.gene97782:CDS | 30.0% | |
AGATATACAACAATGTTAGC+AGG | - | chr7.3:82056168-82056187 | MS.gene97782:CDS | 30.0% | |
CTCTTCAAAGTCGTTATAAT+CGG | - | chr7.3:82054554-82054573 | MS.gene97782:CDS | 30.0% | |
CTTACTATAAGGAATATGGA+AGG | + | chr7.3:82055711-82055730 | None:intergenic | 30.0% | |
TAGGAAGTTACTTGATTACA+TGG | - | chr7.3:82055365-82055384 | MS.gene97782:intron | 30.0% | |
TGTGAAGACCTATAAAAACT+AGG | - | chr7.3:82055486-82055505 | MS.gene97782:intron | 30.0% | |
TTGTTTAAAGAGATCTCATG+TGG | - | chr7.3:82055815-82055834 | MS.gene97782:intron | 30.0% | |
! | ATGTGTACTCTAGTGTTTTA+TGG | + | chr7.3:82055658-82055677 | None:intergenic | 30.0% |
!! | ATCAGAAGGTTTGTTTTTCA+TGG | - | chr7.3:82056088-82056107 | MS.gene97782:CDS | 30.0% |
!! | GTGCTTTTTGAATATCATAG+AGG | - | chr7.3:82055783-82055802 | MS.gene97782:intron | 30.0% |
!!! | TTTTTTAGTGAGTATACAGG+AGG | - | chr7.3:82055757-82055776 | MS.gene97782:intron | 30.0% |
AAAATAGCCTTTGCTTTGCT+TGG | + | chr7.3:82056273-82056292 | None:intergenic | 35.0% | |
AAACACTAGAGTACACATTC+AGG | - | chr7.3:82055660-82055679 | MS.gene97782:intron | 35.0% | |
AAACTTTGATATTGCGGTTG+CGG | - | chr7.3:82055410-82055429 | MS.gene97782:intron | 35.0% | |
AATCTCACTAGTACACTCTA+AGG | - | chr7.3:82055278-82055297 | MS.gene97782:intron | 35.0% | |
ATACAACAATGTTAGCAGGA+AGG | - | chr7.3:82056172-82056191 | MS.gene97782:CDS | 35.0% | |
ATCTCACTAGTACACTCTAA+GGG | - | chr7.3:82055279-82055298 | MS.gene97782:intron | 35.0% | |
ATTGCCAATGTGGTTGTAAT+TGG | - | chr7.3:82055449-82055468 | MS.gene97782:intron | 35.0% | |
GTTACTTCTGCTTATTATCG+TGG | - | chr7.3:82054749-82054768 | MS.gene97782:CDS | 35.0% | |
TAATCTCACATTCCAAAGGA+AGG | - | chr7.3:82055014-82055033 | MS.gene97782:intron | 35.0% | |
TGCTGCAAACTTTGATATTG+CGG | - | chr7.3:82055138-82055157 | MS.gene97782:intron | 35.0% | |
! | GATTACAGGGTTTGAAATTG+AGG | - | chr7.3:82055100-82055119 | MS.gene97782:intron | 35.0% |
!!! | AGAACTACTTTTGATAGCGT+TGG | - | chr7.3:82054809-82054828 | MS.gene97782:CDS | 35.0% |
AAAAGTCTTGCGGAATCAGA+AGG | - | chr7.3:82056074-82056093 | MS.gene97782:CDS | 40.0% | |
AGCACCAATTACAACCACAT+TGG | + | chr7.3:82055456-82055475 | None:intergenic | 40.0% | |
ATCCATCTCTTTCCTTCCTT+TGG | + | chr7.3:82055029-82055048 | None:intergenic | 40.0% | |
ATGAGCAAATATGGCAGATG+TGG | - | chr7.3:82055167-82055186 | MS.gene97782:intron | 40.0% | |
ATGGGCAAATATTGCCAATG+TGG | - | chr7.3:82055439-82055458 | MS.gene97782:intron | 40.0% | |
ATGTCAAGTTCAGAAGACGA+AGG | - | chr7.3:82054515-82054534 | MS.gene97782:CDS | 40.0% | |
CGCTGCAAACTTTGATATTG+CGG | - | chr7.3:82055404-82055423 | MS.gene97782:intron | 40.0% | |
CGGCAAAGTATGAGCAAATA+TGG | - | chr7.3:82055158-82055177 | MS.gene97782:intron | 40.0% | |
CTATGGTTAATTGCGGTTGT+GGG | - | chr7.3:82055876-82055895 | MS.gene97782:intron | 40.0% | |
CTTCATTCCAAAGCAACGAT+CGG | - | chr7.3:82054635-82054654 | MS.gene97782:CDS | 40.0% | |
GAGGAGATTGGATTTACCAA+CGG | + | chr7.3:82054588-82054607 | None:intergenic | 40.0% | |
TCTACATCCAAGCAAAGCAA+AGG | - | chr7.3:82056263-82056282 | MS.gene97782:CDS | 40.0% | |
TGAAGAAGGCAAAAGTCTTG+CGG | - | chr7.3:82056064-82056083 | MS.gene97782:CDS | 40.0% | |
TTCCAAAGGAAGGAAAGAGA+TGG | - | chr7.3:82055024-82055043 | MS.gene97782:intron | 40.0% | |
TTTCATGGAAACCTCTGCTT+TGG | - | chr7.3:82056103-82056122 | MS.gene97782:CDS | 40.0% | |
! | CACAAATTTGTAGGGAGTAC+AGG | + | chr7.3:82055592-82055611 | None:intergenic | 40.0% |
!! | AGAGATGTGAGCATTGAAGA+AGG | - | chr7.3:82056050-82056069 | MS.gene97782:CDS | 40.0% |
!! | AGGGTCAGTCTTGTTAACAA+TGG | - | chr7.3:82056236-82056255 | MS.gene97782:CDS | 40.0% |
!! | TGTGAAGACAGCTTTTGAGA+TGG | - | chr7.3:82056136-82056155 | MS.gene97782:CDS | 40.0% |
AGGCTGAACTATCTGTCAAC+AGG | - | chr7.3:82056216-82056235 | MS.gene97782:CDS | 45.0% | |
ATTGCGGTTGCGGCAAAATA+TGG | - | chr7.3:82055420-82055439 | MS.gene97782:intron | 45.0% | |
ATTTGTCGAGTCCAAAGCAG+AGG | + | chr7.3:82056117-82056136 | None:intergenic | 45.0% | |
CACTTAATGAGACACCTCAG+AGG | + | chr7.3:82055529-82055548 | None:intergenic | 45.0% | |
CCTGAACTCAGACACTTACA+AGG | - | chr7.3:82056196-82056215 | MS.gene97782:CDS | 45.0% | |
CCTTGTAAGTGTCTGAGTTC+AGG | + | chr7.3:82056199-82056218 | None:intergenic | 45.0% | |
GAGATTGGATTTACCAACGG+CGG | + | chr7.3:82054585-82054604 | None:intergenic | 45.0% | |
GCTATGGTTAATTGCGGTTG+TGG | - | chr7.3:82055875-82055894 | MS.gene97782:intron | 45.0% | |
GGCTGAACTATCTGTCAACA+GGG | - | chr7.3:82056217-82056236 | MS.gene97782:CDS | 45.0% | |
GGTGGGAAACAAGTGTGATT+TGG | - | chr7.3:82056019-82056038 | MS.gene97782:CDS | 45.0% | |
GTGTCAGATAGAGACGTAAC+AGG | + | chr7.3:82055632-82055651 | None:intergenic | 45.0% | |
TCAAGTTCAGAAGACGAAGG+AGG | - | chr7.3:82054518-82054537 | MS.gene97782:CDS | 45.0% | |
TGCAGCTCATTGTGATACGA+CGG | - | chr7.3:82055983-82056002 | MS.gene97782:CDS | 45.0% | |
TTAATGAGACACCTCAGAGG+AGG | + | chr7.3:82055526-82055545 | None:intergenic | 45.0% | |
TTCAACTCCGATCGTTGCTT+TGG | + | chr7.3:82054645-82054664 | None:intergenic | 45.0% | |
TTGCGGTTGCGGCAAAATAT+GGG | - | chr7.3:82055421-82055440 | MS.gene97782:intron | 45.0% | |
! | AATTGCATTGACCTCCTCTG+AGG | - | chr7.3:82055512-82055531 | MS.gene97782:intron | 45.0% |
! | AGGGTTTGAAATTGAGGTCG+TGG | - | chr7.3:82055106-82055125 | MS.gene97782:intron | 45.0% |
! | TCACTAGTACACTCTAAGGG+TGG | - | chr7.3:82055282-82055301 | MS.gene97782:intron | 45.0% |
!! | GCTTATTATCGTGGTGCTGT+TGG | - | chr7.3:82054758-82054777 | MS.gene97782:CDS | 45.0% |
!!! | CTTTTGATAGCGTTGGTCGT+TGG | - | chr7.3:82054816-82054835 | MS.gene97782:intron | 45.0% |
AGCGTATCGTGAGAGGAGAT+TGG | + | chr7.3:82054600-82054619 | None:intergenic | 50.0% | |
AGCTCATTGTGATACGACGG+TGG | - | chr7.3:82055986-82056005 | MS.gene97782:CDS | 50.0% | |
AGTTCAGAAGACGAAGGAGG+AGG | - | chr7.3:82054521-82054540 | MS.gene97782:CDS | 50.0% | |
! | ATTTGTAGGGAGTACAGGCG+AGG | + | chr7.3:82055587-82055606 | None:intergenic | 50.0% |
! | GCTCAGATTTGGGATACTGC+TGG | - | chr7.3:82054707-82054726 | MS.gene97782:CDS | 50.0% |
!! | CACATTCAGGTTGTGCTGCT+AGG | - | chr7.3:82055673-82055692 | MS.gene97782:intron | 50.0% |
ACGGTGGCAATGATGCTGGT+GGG | - | chr7.3:82056002-82056021 | MS.gene97782:CDS | 55.0% | |
ATAATCGGTGACTCCGCCGT+TGG | - | chr7.3:82054569-82054588 | MS.gene97782:CDS | 55.0% | |
TACGACGGTGGCAATGATGC+TGG | - | chr7.3:82055998-82056017 | MS.gene97782:CDS | 55.0% | |
CGTTGCGAGCGTATCGTGAG+AGG | + | chr7.3:82054607-82054626 | None:intergenic | 60.0% | |
GACGGTGGCAATGATGCTGG+TGG | - | chr7.3:82056001-82056020 | MS.gene97782:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 82054515 | 82056307 | 82054515 | ID=MS.gene97782 |
chr7.3 | mRNA | 82054515 | 82056307 | 82054515 | ID=MS.gene97782.t1;Parent=MS.gene97782 |
chr7.3 | exon | 82055968 | 82056307 | 82055968 | ID=MS.gene97782.t1.exon1;Parent=MS.gene97782.t1 |
chr7.3 | CDS | 82055968 | 82056307 | 82055968 | ID=cds.MS.gene97782.t1;Parent=MS.gene97782.t1 |
chr7.3 | exon | 82054515 | 82054834 | 82054515 | ID=MS.gene97782.t1.exon2;Parent=MS.gene97782.t1 |
chr7.3 | CDS | 82054515 | 82054834 | 82054515 | ID=cds.MS.gene97782.t1;Parent=MS.gene97782.t1 |
Gene Sequence |
Protein sequence |