AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03411

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03411.t1 MTR_1g097420 88.462 208 21 2 1 206 1 207 2.27e-135 377
MS.gene03411.t1 MTR_1g097420 78.298 235 21 3 1 206 1 234 1.98e-129 363
MS.gene03411.t1 MTR_8g092020 76.355 203 47 1 4 206 8 209 5.56e-116 328
MS.gene03411.t1 MTR_4g012940 73.913 207 53 1 1 206 1 207 9.23e-112 318
MS.gene03411.t1 MTR_6g039490 76.699 206 47 1 1 206 1 205 1.10e-111 318
MS.gene03411.t1 MTR_4g069850 73.913 207 52 2 1 206 1 206 6.00e-111 316
MS.gene03411.t1 MTR_2g101890 74.020 204 52 1 4 206 6 209 1.03e-110 315
MS.gene03411.t1 MTR_1452s0010 88.421 95 11 0 28 122 1 95 1.95e-58 179
MS.gene03411.t1 MTR_1663s0010 96.000 75 3 0 110 184 1 75 7.66e-48 151
MS.gene03411.t1 MTR_1686s0010 72.289 83 23 0 28 110 1 83 6.62e-42 137
MS.gene03411.t1 MTR_4g079350 41.212 165 90 3 8 172 13 170 2.75e-39 134
MS.gene03411.t1 MTR_2g096550 42.515 167 91 3 8 174 15 176 3.84e-39 134
MS.gene03411.t1 MTR_4g088090 40.000 165 92 3 8 172 13 170 1.08e-38 132
MS.gene03411.t1 MTR_2g005510 39.773 176 92 4 1 169 1 169 3.84e-38 131
MS.gene03411.t1 MTR_8g103550 40.000 175 97 4 1 174 1 168 6.47e-38 130
MS.gene03411.t1 MTR_1g052475 43.030 165 87 3 8 172 15 172 7.05e-38 130
MS.gene03411.t1 MTR_7g405790 41.975 162 87 3 8 169 15 169 1.24e-37 130
MS.gene03411.t1 MTR_2g014990 39.394 165 93 3 8 172 13 170 1.32e-37 130
MS.gene03411.t1 MTR_2g090865 40.606 165 91 3 8 172 11 168 1.42e-37 130
MS.gene03411.t1 MTR_6g021790 40.116 172 96 3 8 179 6 170 2.17e-37 129
MS.gene03411.t1 MTR_1g068730 39.011 182 105 3 8 189 15 190 2.23e-37 129
MS.gene03411.t1 MTR_1g068740 38.462 182 106 3 8 189 15 190 8.93e-37 128
MS.gene03411.t1 MTR_5g013900 35.294 204 118 4 10 206 11 207 1.06e-36 127
MS.gene03411.t1 MTR_2g005500 35.714 196 114 4 8 203 9 192 1.34e-36 127
MS.gene03411.t1 MTR_8g090215 37.500 208 108 6 10 206 11 207 1.44e-36 127
MS.gene03411.t1 MTR_2g075950 39.394 165 93 3 8 172 13 170 2.10e-36 127
MS.gene03411.t1 MTR_8g036220 40.491 163 90 3 8 170 16 171 2.29e-36 127
MS.gene03411.t1 MTR_7g100020 40.719 167 93 3 8 174 15 175 2.59e-36 126
MS.gene03411.t1 MTR_8g089985 40.000 165 92 3 8 172 17 174 3.94e-36 126
MS.gene03411.t1 MTR_1g115325 40.120 167 94 3 8 174 15 175 4.37e-36 126
MS.gene03411.t1 MTR_3g069510 38.788 165 94 3 8 172 12 169 4.68e-36 126
MS.gene03411.t1 MTR_4g098950 35.468 203 118 5 10 206 11 206 5.12e-36 125
MS.gene03411.t1 MTR_0262s0050 42.424 165 88 3 8 172 15 172 5.54e-36 126
MS.gene03411.t1 MTR_4g064897 37.576 165 96 3 8 172 12 169 8.89e-36 125
MS.gene03411.t1 MTR_3g086980 40.000 165 92 3 8 172 16 173 1.16e-35 125
MS.gene03411.t1 MTR_2g027660 38.690 168 96 3 8 175 6 166 1.61e-35 124
MS.gene03411.t1 MTR_7g051940 40.123 162 90 3 8 169 13 167 1.87e-35 124
MS.gene03411.t1 MTR_8g006970 39.759 166 93 3 8 173 8 166 2.21e-35 123
MS.gene03411.t1 MTR_8g031680 38.596 171 98 3 9 179 7 170 2.99e-35 124
MS.gene03411.t1 MTR_5g076590 39.394 165 93 3 10 174 12 169 3.75e-35 123
MS.gene03411.t1 MTR_8g006970 39.759 166 93 3 8 173 22 180 4.45e-35 123
MS.gene03411.t1 MTR_7g081700 36.410 195 112 4 8 202 8 190 6.79e-35 122
MS.gene03411.t1 MTR_3g087160 34.975 203 119 4 10 206 11 206 7.23e-35 122
MS.gene03411.t1 MTR_3g064390 39.394 165 93 3 10 174 12 169 8.60e-35 122
MS.gene03411.t1 MTR_2g083860 36.970 165 97 2 8 172 13 170 8.67e-34 120
MS.gene03411.t1 MTR_8g031870 36.047 172 103 3 3 174 1 165 9.54e-34 119
MS.gene03411.t1 MTR_4g063160 39.645 169 94 4 8 174 15 177 8.72e-33 117
MS.gene03411.t1 MTR_8g107070 36.022 186 110 4 8 191 14 192 1.34e-32 118
MS.gene03411.t1 MTR_8g027220 38.182 165 95 3 8 172 26 183 1.68e-32 117
MS.gene03411.t1 MTR_6g079550 38.182 165 95 3 8 172 12 169 2.90e-32 116
MS.gene03411.t1 MTR_1g078200 37.126 167 98 3 8 174 14 173 3.54e-32 116
MS.gene03411.t1 MTR_8g031660 35.393 178 108 3 8 185 6 176 1.27e-31 114
MS.gene03411.t1 MTR_1812s0010 67.568 74 24 0 110 183 1 74 3.74e-31 109
MS.gene03411.t1 MTR_7g117910 34.328 201 122 4 8 206 20 212 7.57e-31 112
MS.gene03411.t1 MTR_8g031830 35.976 164 98 3 3 166 1 157 6.38e-29 107
MS.gene03411.t1 MTR_1g068730 41.463 123 68 1 8 130 15 133 1.14e-28 105
MS.gene03411.t1 MTR_1g094220 35.928 167 99 4 9 174 32 191 1.27e-28 106
MS.gene03411.t1 MTR_1g068740 41.463 123 68 1 8 130 15 133 1.43e-28 106
MS.gene03411.t1 MTR_2g102060 35.152 165 100 3 10 174 12 169 3.06e-28 105
MS.gene03411.t1 MTR_3g064390 41.322 121 67 1 10 130 12 128 3.94e-28 103
MS.gene03411.t1 MTR_7g103070 33.663 202 122 6 10 205 18 213 1.29e-27 104
MS.gene03411.t1 MTR_4g099470 36.517 178 93 6 37 206 13 178 2.49e-27 102
MS.gene03411.t1 MTR_1g094220 34.911 169 102 4 9 176 32 193 7.85e-27 102
MS.gene03411.t1 MTR_1g062760 35.437 206 112 9 9 204 15 209 9.87e-27 102
MS.gene03411.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 1.32e-26 101
MS.gene03411.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 2.12e-26 101
MS.gene03411.t1 MTR_8g093740 38.037 163 93 6 8 169 13 168 3.55e-26 100
MS.gene03411.t1 MTR_1g029450 38.037 163 93 6 8 169 17 172 9.98e-26 99.4
MS.gene03411.t1 MTR_1g090717 36.139 202 118 8 9 205 16 211 2.18e-25 98.6
MS.gene03411.t1 MTR_3g096350 37.805 164 92 6 8 169 12 167 7.25e-25 97.1
MS.gene03411.t1 MTR_3g107713 27.513 189 124 4 9 197 14 189 1.04e-23 94.4
MS.gene03411.t1 MTR_3g107707 27.513 189 124 4 9 197 14 189 1.05e-23 94.4
MS.gene03411.t1 MTR_3g107717 27.513 189 124 4 9 197 14 189 1.13e-23 94.4
MS.gene03411.t1 MTR_5g036990 62.857 70 25 1 39 107 32 101 2.12e-22 88.2
MS.gene03411.t1 MTR_3g096350 40.650 123 66 4 8 128 12 129 1.83e-21 86.7
MS.gene03411.t1 MTR_3g096350 40.650 123 66 4 8 128 12 129 1.96e-21 86.7
MS.gene03411.t1 MTR_6g087980 29.469 207 123 7 8 205 6 198 1.25e-20 85.9
MS.gene03411.t1 MTR_4g113620 26.601 203 120 7 1 197 1 180 5.09e-19 81.6
MS.gene03411.t1 MTR_8g093740 37.879 132 75 5 39 169 10 135 1.11e-18 80.1
MS.gene03411.t1 MTR_2g090875 30.409 171 104 5 8 169 6 170 3.00e-18 79.3
MS.gene03411.t1 MTR_4g088055 30.168 179 110 5 8 177 6 178 7.22e-18 78.2
MS.gene03411.t1 MTR_5g022600 30.994 171 103 6 8 169 6 170 7.92e-17 75.5
MS.gene03411.t1 MTR_4g073250 28.649 185 117 5 8 183 6 184 1.06e-16 75.1
MS.gene03411.t1 MTR_8g075240 31.579 171 102 6 8 169 6 170 1.40e-16 74.7
MS.gene03411.t1 MTR_7g103070 32.919 161 96 6 50 204 2 156 1.47e-16 73.9
MS.gene03411.t1 MTR_2g093510 57.143 70 30 0 116 185 758 827 6.31e-16 75.9
MS.gene03411.t1 MTR_3g078260 29.775 178 110 5 1 169 1 172 2.00e-15 72.0
MS.gene03411.t1 MTR_3g078260 32.031 128 80 4 1 127 1 122 7.39e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03411.t1 AT4G09720 82.039 206 37 0 1 206 1 206 5.37e-129 362
MS.gene03411.t1 AT4G09720 80.095 211 37 1 1 206 1 211 1.49e-125 353
MS.gene03411.t1 AT4G09720 77.880 217 37 1 1 206 1 217 2.53e-125 353
MS.gene03411.t1 AT1G22740 83.010 206 32 2 1 206 1 203 1.06e-124 350
MS.gene03411.t1 AT2G21880 72.642 212 49 3 2 206 3 212 3.45e-112 319
MS.gene03411.t1 AT3G16100 72.330 206 57 0 1 206 1 206 3.40e-111 317
MS.gene03411.t1 AT1G52280 72.816 206 56 0 1 206 1 206 3.76e-111 317
MS.gene03411.t1 AT3G18820 73.913 207 52 2 1 206 1 206 4.23e-109 311
MS.gene03411.t1 AT1G49300 70.531 207 59 2 1 206 1 206 2.17e-105 302
MS.gene03411.t1 AT1G49300 70.531 207 59 2 1 206 1 206 2.17e-105 302
MS.gene03411.t1 AT4G09720 79.532 171 35 0 36 206 2 172 5.26e-103 295
MS.gene03411.t1 AT4G09720 79.532 171 35 0 36 206 2 172 5.26e-103 295
MS.gene03411.t1 AT4G09720 79.532 171 35 0 36 206 2 172 5.26e-103 295
MS.gene03411.t1 AT2G21880 68.868 212 49 4 2 206 3 204 1.59e-102 295
MS.gene03411.t1 AT2G21880 70.899 189 46 3 25 206 1 187 6.15e-97 280
MS.gene03411.t1 AT2G21880 70.899 189 46 3 25 206 1 187 6.15e-97 280
MS.gene03411.t1 AT5G39620 56.931 202 86 1 6 206 3 204 8.77e-83 244
MS.gene03411.t1 AT3G12160 39.336 211 107 5 8 204 15 218 4.49e-40 136
MS.gene03411.t1 AT1G28550 41.212 165 90 3 8 172 13 170 6.44e-39 133
MS.gene03411.t1 AT3G15060 40.606 165 91 3 8 172 13 170 8.57e-39 133
MS.gene03411.t1 AT5G60860 40.000 165 92 3 8 172 13 170 1.11e-38 133
MS.gene03411.t1 AT2G33870 39.394 165 93 3 8 172 13 170 2.32e-38 132
MS.gene03411.t1 AT1G09630 41.212 165 90 3 8 172 12 169 3.48e-38 131
MS.gene03411.t1 AT5G47960 41.212 165 90 3 8 172 15 172 1.81e-37 130
MS.gene03411.t1 AT3G53610 36.683 199 117 4 8 205 15 205 3.19e-37 129
MS.gene03411.t1 AT3G53610 36.683 199 117 4 8 205 15 205 3.19e-37 129
MS.gene03411.t1 AT3G53610 36.683 199 117 4 8 205 15 205 3.19e-37 129
MS.gene03411.t1 AT5G45750 39.394 165 93 3 8 172 13 170 4.17e-37 129
MS.gene03411.t1 AT2G44610 36.585 205 115 5 10 206 11 208 4.17e-37 128
MS.gene03411.t1 AT5G59840 40.719 167 93 2 8 174 15 175 6.35e-37 128
MS.gene03411.t1 AT4G35860 37.791 172 100 3 8 179 6 170 2.98e-36 126
MS.gene03411.t1 AT3G11730 36.139 202 117 5 8 204 8 202 4.25e-36 125
MS.gene03411.t1 AT5G10260 36.058 208 111 6 10 206 11 207 6.33e-36 125
MS.gene03411.t1 AT3G46060 35.897 195 119 3 8 202 15 203 6.56e-36 125
MS.gene03411.t1 AT3G46060 35.897 195 119 3 8 202 15 203 6.56e-36 125
MS.gene03411.t1 AT3G46060 35.897 195 119 3 8 202 15 203 6.56e-36 125
MS.gene03411.t1 AT5G59150 37.654 162 94 3 8 169 12 166 1.52e-35 125
MS.gene03411.t1 AT4G17170 35.071 211 116 6 8 204 6 209 1.56e-35 124
MS.gene03411.t1 AT2G43130 37.791 172 100 3 8 179 12 176 1.66e-35 124
MS.gene03411.t1 AT4G17530 36.453 203 115 5 8 205 8 201 2.27e-35 124
MS.gene03411.t1 AT1G05810 39.157 166 94 3 4 169 8 166 3.36e-35 124
MS.gene03411.t1 AT5G47200 36.453 203 115 5 8 205 8 201 3.46e-35 123
MS.gene03411.t1 AT1G16920 38.182 165 95 2 8 172 13 170 4.26e-35 123
MS.gene03411.t1 AT1G07410 36.970 165 97 3 8 172 12 169 5.70e-35 123
MS.gene03411.t1 AT1G05810 39.157 166 94 3 4 169 54 212 6.84e-35 124
MS.gene03411.t1 AT4G18800 37.576 165 96 3 8 172 13 170 7.15e-35 123
MS.gene03411.t1 AT5G64990 35.885 209 111 5 10 206 9 206 8.43e-35 122
MS.gene03411.t1 AT5G65270 40.741 162 89 3 8 169 17 171 9.04e-35 123
MS.gene03411.t1 AT4G18430 35.152 165 100 3 8 172 13 170 9.79e-35 122
MS.gene03411.t1 AT4G17160 36.408 206 112 7 9 204 7 203 9.97e-35 122
MS.gene03411.t1 AT2G31680 36.047 172 103 3 8 179 12 176 1.62e-34 122
MS.gene03411.t1 AT4G39890 38.323 167 93 3 9 173 10 168 2.03e-34 122
MS.gene03411.t1 AT1G01200 40.000 165 93 3 8 172 28 186 2.96e-34 122
MS.gene03411.t1 AT3G09900 39.560 182 104 2 8 189 15 190 3.00e-34 121
MS.gene03411.t1 AT5G03520 39.560 182 104 3 8 189 15 190 3.77e-34 121
MS.gene03411.t1 AT4G39990 38.889 162 92 3 8 169 17 171 7.34e-34 120
MS.gene03411.t1 AT1G73640 38.037 163 94 3 8 170 13 168 7.75e-34 120
MS.gene03411.t1 AT1G18200 36.970 165 97 3 8 172 13 170 7.90e-34 120
MS.gene03411.t1 AT2G22290 35.714 210 109 7 10 206 11 207 1.10e-33 119
MS.gene03411.t1 AT3G46830 36.364 165 98 3 8 172 12 169 1.10e-33 120
MS.gene03411.t1 AT3G46830 36.364 165 98 3 8 172 12 169 1.10e-33 120
MS.gene03411.t1 AT1G02130 37.931 174 99 4 8 181 8 172 1.82e-33 119
MS.gene03411.t1 AT5G45130 39.394 165 93 3 10 174 12 169 4.38e-33 118
MS.gene03411.t1 AT1G06400 35.758 165 99 3 8 172 13 170 2.23e-32 116
MS.gene03411.t1 AT4G19640 38.182 165 95 3 10 174 12 169 2.39e-32 116
MS.gene03411.t1 AT5G64990 34.722 216 111 6 10 206 9 213 4.14e-32 115
MS.gene03411.t1 AT5G45130 39.264 163 92 3 12 174 22 177 6.86e-32 115
MS.gene03411.t1 AT3G07410 37.654 162 94 3 8 169 12 166 9.59e-32 115
MS.gene03411.t1 AT5G47520 38.323 167 96 4 8 174 14 173 5.87e-31 113
MS.gene03411.t1 AT3G54840 36.527 167 98 4 9 174 34 193 6.22e-29 107
MS.gene03411.t1 AT3G54840 36.364 165 97 4 11 174 2 159 1.92e-28 105
MS.gene03411.t1 AT3G54840 36.420 162 95 4 9 169 34 188 7.35e-28 104
MS.gene03411.t1 AT4G19640 40.833 120 67 1 10 129 12 127 1.47e-27 102
MS.gene03411.t1 AT1G43890 39.306 173 93 7 8 175 13 178 3.98e-27 103
MS.gene03411.t1 AT1G43890 39.306 173 93 7 8 175 13 178 3.98e-27 103
MS.gene03411.t1 AT1G43890 39.306 173 93 7 8 175 13 178 3.98e-27 103
MS.gene03411.t1 AT4G19640 40.833 120 67 1 10 129 12 127 8.76e-27 101
MS.gene03411.t1 AT5G03520 39.726 146 82 3 44 189 41 180 3.44e-26 100
MS.gene03411.t1 AT5G03530 38.095 168 92 6 9 173 14 172 5.42e-26 100
MS.gene03411.t1 AT5G03530 38.095 168 92 6 9 173 14 172 5.42e-26 100
MS.gene03411.t1 AT5G20010 28.042 189 123 4 9 197 14 189 8.22e-25 97.4
MS.gene03411.t1 AT5G20020 28.042 189 123 4 9 197 14 189 1.23e-24 96.7
MS.gene03411.t1 AT5G55190 27.513 189 124 4 9 197 14 189 9.97e-24 94.4
MS.gene03411.t1 AT4G35860 36.923 130 75 3 50 179 2 124 1.25e-23 92.8
MS.gene03411.t1 AT4G28950 30.732 205 122 7 8 205 6 197 5.15e-23 92.4
MS.gene03411.t1 AT5G55080 27.711 166 110 3 9 174 14 169 8.04e-23 92.0
MS.gene03411.t1 AT3G09910 34.940 166 100 6 9 173 14 172 6.69e-20 84.0
MS.gene03411.t1 AT3G09910 34.940 166 100 6 9 173 14 172 6.69e-20 84.0
MS.gene03411.t1 AT3G09910 34.940 166 100 6 9 173 14 172 6.69e-20 84.0
MS.gene03411.t1 AT5G59150 35.833 120 70 3 50 169 3 115 8.09e-20 82.8
MS.gene03411.t1 AT3G09910 34.940 166 100 6 9 173 14 172 1.02e-19 83.2
MS.gene03411.t1 AT3G09910 34.940 166 100 6 9 173 14 172 1.02e-19 83.2
MS.gene03411.t1 AT5G45970 29.213 178 113 4 8 177 6 178 1.37e-18 80.5
MS.gene03411.t1 AT2G44690 30.168 179 110 5 8 177 18 190 4.31e-18 79.3
MS.gene03411.t1 AT1G20090 30.168 179 110 5 8 177 5 177 3.51e-17 76.6
MS.gene03411.t1 AT1G75840 30.168 179 110 5 8 177 6 178 6.47e-17 75.9
MS.gene03411.t1 AT4G35020 30.168 179 110 5 8 177 6 178 1.02e-16 75.5
MS.gene03411.t1 AT4G35020 30.168 179 110 5 8 177 6 178 1.02e-16 75.5
MS.gene03411.t1 AT4G35020 30.168 179 110 5 8 177 6 178 1.02e-16 75.5
MS.gene03411.t1 AT3G51300 30.409 171 104 5 8 169 6 170 1.39e-16 75.1
MS.gene03411.t1 AT3G48040 30.337 178 109 5 1 169 1 172 4.70e-16 73.9
MS.gene03411.t1 AT5G62880 30.337 178 109 5 1 169 1 172 6.38e-16 73.6
MS.gene03411.t1 AT2G17800 29.825 171 105 5 8 169 6 170 8.66e-16 72.8
MS.gene03411.t1 AT2G17800 29.825 171 105 5 8 169 6 170 8.66e-16 72.8
MS.gene03411.t1 AT4G35950 29.825 171 105 5 8 169 6 170 1.16e-15 72.4
MS.gene03411.t1 AT5G62880 30.319 188 111 6 1 174 1 182 3.37e-15 71.2
MS.gene03411.t1 AT3G48040 29.586 169 104 5 1 160 1 163 1.13e-13 66.6
MS.gene03411.t1 AT4G35020 32.231 121 75 4 8 127 6 120 1.13e-12 63.2
MS.gene03411.t1 AT4G35020 32.231 121 75 4 8 127 6 120 1.13e-12 63.2

Find 40 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCAAAGTTATCGTTCT+TGG 0.212272 6.2:+34387559 MS.gene03411:CDS
TTGTTTCCAAGCAATATAAA+TGG 0.243659 6.2:-34391932 None:intergenic
GGAAAAGTGCTTGGATTAGA+AGG 0.279843 6.2:-34391911 None:intergenic
CATGTCTTGCTCACGTTCAT+TGG 0.341105 6.2:-34392180 None:intergenic
CATTTGATACACTTGATAAC+TGG 0.350734 6.2:+34389655 MS.gene03411:CDS
TGCTCATTCTCTGGAACAAC+AGG 0.356385 6.2:-34393782 None:intergenic
GTCATCGATCTGCAATTCTT+TGG 0.364093 6.2:-34389395 None:intergenic
TTCATTGGCTAATGCGGTCT+TGG 0.384901 6.2:-34392165 None:intergenic
CCACCCCTCTGCTCATTCTC+TGG 0.385786 6.2:-34393791 None:intergenic
GGAAACAAAGTTGATATTGA+TGG 0.397484 6.2:+34391947 MS.gene03411:CDS
GCACGAGGAGTTTCTGAAAC+AGG 0.403015 6.2:+34389677 MS.gene03411:CDS
TTTGCAGATGTCTCAAAGTA+AGG 0.412467 6.2:-34392104 None:intergenic
GGAACAACAGGCTCCGGAAT+AGG 0.412607 6.2:-34393770 None:intergenic
TTCTCTGGAACAACAGGCTC+CGG 0.445505 6.2:-34393776 None:intergenic
CAGCAATATAAAGCTACAAT+TGG 0.445543 6.2:+34389358 MS.gene03411:CDS
AAGGAGTGGTGTGCCTCAAA+AGG 0.461942 6.2:+34392074 MS.gene03411:CDS
CAGGAGAGATTTCAAAGTCT+TGG 0.477942 6.2:+34389570 MS.gene03411:CDS
GAAAAGTGCTTGGATTAGAA+GGG 0.482693 6.2:-34391910 None:intergenic
GAGTAAAGTTCTTCTGCGTA+AGG 0.495389 6.2:-34387542 None:intergenic
GATATGGGACACTGCAGGGC+AGG 0.508321 6.2:+34389551 MS.gene03411:intron
AATATAAATGGAAAAGTGCT+TGG 0.513022 6.2:-34391920 None:intergenic
CTCACGTTCATTGGCTAATG+CGG 0.541940 6.2:-34392171 None:intergenic
TTGTAGATATGGGACACTGC+AGG 0.562646 6.2:+34389546 MS.gene03411:intron
ACAAAGTTGATATTGATGGC+GGG 0.570371 6.2:+34391951 MS.gene03411:CDS
AGGAGTGGTGTGCCTCAAAA+GGG 0.578968 6.2:+34392075 MS.gene03411:CDS
GTTATCGTTCTTGGAGACAG+TGG 0.595335 6.2:+34387568 MS.gene03411:CDS
TTACTTTGAGACATCTGCAA+AGG 0.600040 6.2:+34392106 MS.gene03411:CDS
TTATCGTTCTTGGAGACAGT+GGG 0.601568 6.2:+34387569 MS.gene03411:CDS
AACAAAGTTGATATTGATGG+CGG 0.603275 6.2:+34391950 MS.gene03411:CDS
TGTAGATATGGGACACTGCA+GGG 0.605102 6.2:+34389547 MS.gene03411:intron
TGTTCCAGAGAATGAGCAGA+GGG 0.618287 6.2:+34393787 MS.gene03411:CDS
CTGATAAGAAAGCAAAGGAG+TGG 0.631616 6.2:+34392060 MS.gene03411:CDS
CCAGAGAATGAGCAGAGGGG+TGG 0.645887 6.2:+34393791 MS.gene03411:CDS
GGTTTCTGATAAGAAAGCAA+AGG 0.657913 6.2:+34392055 MS.gene03411:intron
ATGCGGTCTTGGCAATACGT+AGG 0.682683 6.2:-34392154 None:intergenic
CCACTTGTAGAGTAACTAGT+CGG 0.695643 6.2:-34389417 None:intergenic
TTGTTCCAGAGAATGAGCAG+AGG 0.709082 6.2:+34393786 MS.gene03411:CDS
TGATGGCGGGAATAGTCGAG+TGG 0.710562 6.2:+34391964 MS.gene03411:CDS
TACACTTGATAACTGGCACG+AGG 0.736931 6.2:+34389662 MS.gene03411:CDS
GTTCCAGAGAATGAGCAGAG+GGG 0.763638 6.2:+34393788 MS.gene03411:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATCTTATAAATTTGAT+CGG + chr6.2:34392998-34393017 MS.gene03411:intron 10.0%
!!! ATTGAAATTTTAAATAATAG+AGG + chr6.2:34388997-34389016 MS.gene03411:intron 10.0%
!!! CTATTTTATTTTTCAAATAT+CGG + chr6.2:34389284-34389303 MS.gene03411:intron 10.0%
!!! TCTATTATTTAAAATTTCAA+TGG - chr6.2:34388998-34389017 None:intergenic 10.0%
!!! TTGAAATTTTAAATAATAGA+GGG + chr6.2:34388998-34389017 MS.gene03411:intron 10.0%
!! AAATGAAGTTATAGTATTAA+TGG - chr6.2:34390680-34390699 None:intergenic 15.0%
!! AATGAAGTTATAGTATTAAT+GGG - chr6.2:34390679-34390698 None:intergenic 15.0%
!! ATTAAAGATAAGAAAATGAT+AGG + chr6.2:34391225-34391244 MS.gene03411:intron 15.0%
!! CAAATTTATAAGATTTAATG+AGG - chr6.2:34392996-34393015 None:intergenic 15.0%
!! TTAAAGATAAGAAAATGATA+GGG + chr6.2:34391226-34391245 MS.gene03411:intron 15.0%
!!! ATTATTTGGTGAAATAATAA+TGG - chr6.2:34390718-34390737 None:intergenic 15.0%
!!! ATTTTGTTTTCATTTTTGTT+AGG + chr6.2:34387658-34387677 MS.gene03411:intron 15.0%
!!! TATTTTTAGGTTTTAGTTTT+GGG + chr6.2:34392638-34392657 MS.gene03411:intron 15.0%
!!! TTATTTGGTGAAATAATAAT+GGG - chr6.2:34390717-34390736 None:intergenic 15.0%
!!! TTATTTTTAGGTTTTAGTTT+TGG + chr6.2:34392637-34392656 MS.gene03411:intron 15.0%
!!! TTTTGTTTTCATTTTTGTTA+GGG + chr6.2:34387689-34387708 MS.gene03411:intron 15.0%
!! AATACTATAACTTCATTTCA+TGG + chr6.2:34390682-34390701 MS.gene03411:intron 20.0%
!! ATATCTATACAAGTAGTTAA+TGG - chr6.2:34389320-34389339 None:intergenic 20.0%
!! ATGAAGTAAATTATATAACC+CGG + chr6.2:34391652-34391671 MS.gene03411:intron 20.0%
!! ATTCTTTGGTGAAATAATAA+TGG - chr6.2:34390553-34390572 None:intergenic 20.0%
!! ATTTACTTCATAGAAATTCA+AGG - chr6.2:34391643-34391662 None:intergenic 20.0%
!! TAAAATGGTAATTAATGAAC+CGG - chr6.2:34391871-34391890 None:intergenic 20.0%
!! TAAATTATTTATTGACAGAG+AGG + chr6.2:34393514-34393533 MS.gene03411:intron 20.0%
!! TATAGAAAATAGTTCATCTA+AGG - chr6.2:34391489-34391508 None:intergenic 20.0%
!! TCTTATCTTTAATATAGTCA+TGG - chr6.2:34391218-34391237 None:intergenic 20.0%
!! TGACAAAATTAGAAAAATAG+AGG - chr6.2:34389715-34389734 None:intergenic 20.0%
!! TGTATAGCCTATAATTTATT+TGG - chr6.2:34389780-34389799 None:intergenic 20.0%
!! TTCTTTGGTGAAATAATAAT+GGG - chr6.2:34390552-34390571 None:intergenic 20.0%
!!! AAAAGTTTAAAATCAAACTG+TGG - chr6.2:34392973-34392992 None:intergenic 20.0%
!!! ACAGTTTTAAATAAAGATCT+GGG - chr6.2:34388943-34388962 None:intergenic 20.0%
!!! AGGGAATTTTCATATATTTA+TGG + chr6.2:34391245-34391264 MS.gene03411:intron 20.0%
!!! ATAATTACAATCTTTTCCTT+TGG - chr6.2:34392558-34392577 None:intergenic 20.0%
!!! ATTTGATTTAGATCGATTTA+AGG + chr6.2:34389250-34389269 MS.gene03411:intron 20.0%
!!! GGGAATTTTCATATATTTAT+GGG + chr6.2:34391246-34391265 MS.gene03411:intron 20.0%
!!! TAAGAATTTAAGATGAAACA+GGG + chr6.2:34393240-34393259 MS.gene03411:intron 20.0%
!!! TAATTACAATCTTTTCCTTT+GGG - chr6.2:34392557-34392576 None:intergenic 20.0%
!!! TACAGTTTTAAATAAAGATC+TGG - chr6.2:34388944-34388963 None:intergenic 20.0%
!!! TGTAGTTTTGCATTATTTTT+AGG + chr6.2:34392625-34392644 MS.gene03411:intron 20.0%
!!! TTATCGCAATTTTCAATATT+GGG + chr6.2:34388232-34388251 MS.gene03411:intron 20.0%
!!! TTTATCGCAATTTTCAATAT+TGG + chr6.2:34388035-34388054 MS.gene03411:intron 20.0%
! AAAACTGAAAATGAAGTTTG+TGG - chr6.2:34387607-34387626 None:intergenic 25.0%
! AACAGTAACACTTATTTAGA+GGG - chr6.2:34390383-34390402 None:intergenic 25.0%
! AATGAATATTGGAAATTGGT+AGG + chr6.2:34389059-34389078 MS.gene03411:intron 25.0%
! AATGGTTATGAATGAATCAA+CGG + chr6.2:34390211-34390230 MS.gene03411:intron 25.0%
! ACCAAATCATAAAATTGCAA+AGG - chr6.2:34387744-34387763 None:intergenic 25.0%
! AGATAGTATATGCAAACAAT+TGG - chr6.2:34392715-34392734 None:intergenic 25.0%
! ATCTTATAAATTTGATCGGA+TGG + chr6.2:34393002-34393021 MS.gene03411:intron 25.0%
! CTGTTTCATCTTAAATTCTT+AGG - chr6.2:34393241-34393260 None:intergenic 25.0%
! CTTTGATATTGATGAGAATT+GGG + chr6.2:34388383-34388402 MS.gene03411:intron 25.0%
! GCTTAATGAATATTGGAAAT+TGG + chr6.2:34389055-34389074 MS.gene03411:intron 25.0%
! GTTGAGTCCAAATAAATTAT+AGG + chr6.2:34389770-34389789 MS.gene03411:intron 25.0%
! TAACAGTAACACTTATTTAG+AGG - chr6.2:34390384-34390403 None:intergenic 25.0%
! TAATTTCAGAGAAAATCGTA+AGG - chr6.2:34389095-34389114 None:intergenic 25.0%
! TATAGCCACATTAATAATGT+GGG - chr6.2:34390435-34390454 None:intergenic 25.0%
! TCTTTGATATTGATGAGAAT+TGG + chr6.2:34388382-34388401 MS.gene03411:intron 25.0%
! TGTGTTTCATTCCATAATTA+GGG + chr6.2:34393607-34393626 MS.gene03411:intron 25.0%
! TTACATAACAAATCATGTTG+TGG - chr6.2:34391736-34391755 None:intergenic 25.0%
! TTAGCATGCTTAATGAATAT+TGG + chr6.2:34389048-34389067 MS.gene03411:intron 25.0%
! TTATAGCCACATTAATAATG+TGG - chr6.2:34390436-34390455 None:intergenic 25.0%
! TTATGTAATTGAACTGCTAT+GGG + chr6.2:34391748-34391767 MS.gene03411:intron 25.0%
! TTGTGTTTCATTCCATAATT+AGG + chr6.2:34393606-34393625 MS.gene03411:intron 25.0%
! TTGTTTCCAAGCAATATAAA+TGG - chr6.2:34391935-34391954 None:intergenic 25.0%
! TTTAGTCATCATTAACATTG+AGG - chr6.2:34390487-34390506 None:intergenic 25.0%
! TTTGATATTGATGAGAATTG+GGG + chr6.2:34388384-34388403 MS.gene03411:intron 25.0%
!! AAATAATGCCTTTTGCTTAT+GGG + chr6.2:34390731-34390750 MS.gene03411:intron 25.0%
!! AAGAATTTAAGATGAAACAG+GGG + chr6.2:34393241-34393260 MS.gene03411:intron 25.0%
!! ACATACAGAGTTTTACATAA+AGG - chr6.2:34388613-34388632 None:intergenic 25.0%
!! ACTTTTCCATTTATATTGCT+TGG + chr6.2:34391926-34391945 MS.gene03411:CDS 25.0%
!! ATGATGGAAAAAAGATACAA+CGG - chr6.2:34391015-34391034 None:intergenic 25.0%
!! CTAAGAATTTAAGATGAAAC+AGG + chr6.2:34393239-34393258 MS.gene03411:intron 25.0%
!! TCCTTTGCAATTTTATGATT+TGG + chr6.2:34387740-34387759 MS.gene03411:intron 25.0%
!! TTTTCTAATTTTGTCACTCT+CGG + chr6.2:34389719-34389738 MS.gene03411:intron 25.0%
!! TTTTCTTTAGTGTCTATGAA+AGG + chr6.2:34392271-34392290 MS.gene03411:intron 25.0%
!!! AATATAAATGGAAAAGTGCT+TGG - chr6.2:34391923-34391942 None:intergenic 25.0%
!!! ATTTTCAATATTGGGTTGAA+TGG + chr6.2:34388240-34388259 MS.gene03411:intron 25.0%
!!! CTTTGAAATTATGATGACAA+TGG + chr6.2:34389865-34389884 MS.gene03411:intron 25.0%
!!! TACGATTTTCTCTGAAATTA+TGG + chr6.2:34389095-34389114 MS.gene03411:intron 25.0%
!!! TATCGGTATTTTGAATATCT+CGG + chr6.2:34387989-34388008 MS.gene03411:intron 25.0%
!!! TATTTAGTTCTTACTTGTCT+TGG + chr6.2:34390140-34390159 MS.gene03411:intron 25.0%
AAATTATATAACCCGGATCA+TGG + chr6.2:34391659-34391678 MS.gene03411:intron 30.0%
AATAGAGGGCAAATACTATT+TGG + chr6.2:34389012-34389031 MS.gene03411:intron 30.0%
AATTCAAGGAAGACAAGAAA+AGG - chr6.2:34391629-34391648 None:intergenic 30.0%
ACAGTAACACTTATTTAGAG+GGG - chr6.2:34390382-34390401 None:intergenic 30.0%
ACCAGATTCTATATAAACCA+AGG + chr6.2:34391117-34391136 MS.gene03411:intron 30.0%
AGCACTCAAGTGAAAATTAA+TGG + chr6.2:34391158-34391177 MS.gene03411:intron 30.0%
AGTTCAGACTAAATGTTAAG+AGG - chr6.2:34392678-34392697 None:intergenic 30.0%
ATAGCCACATTAATAATGTG+GGG - chr6.2:34390434-34390453 None:intergenic 30.0%
ATAGTGGTGTTTATGTCAAT+TGG + chr6.2:34387844-34387863 MS.gene03411:intron 30.0%
ATGTGTTTGTGTTGTAGATA+TGG + chr6.2:34389535-34389554 MS.gene03411:intron 30.0%
ATTACCGCAATTCAAAATCT+CGG - chr6.2:34387956-34387975 None:intergenic 30.0%
ATTTATAGCTATGCGTATTC+AGG - chr6.2:34392497-34392516 None:intergenic 30.0%
CAATTGTCTCAACAAACTAT+TGG - chr6.2:34390060-34390079 None:intergenic 30.0%
CAGCAATATAAAGCTACAAT+TGG + chr6.2:34389358-34389377 MS.gene03411:CDS 30.0%
CCAGATTCTATATAAACCAA+GGG + chr6.2:34391118-34391137 MS.gene03411:intron 30.0%
CTCATATCTGATACAAAGAA+AGG - chr6.2:34393681-34393700 None:intergenic 30.0%
GAAAATGAAGTTTGTGGATT+AGG - chr6.2:34387601-34387620 None:intergenic 30.0%
GAATAACCTAACAAACGAAA+TGG + chr6.2:34390263-34390282 MS.gene03411:intron 30.0%
GACAAGTAAGAACTAAATAC+TGG - chr6.2:34390139-34390158 None:intergenic 30.0%
GACAATTGTAGTTTAATGCA+TGG + chr6.2:34388846-34388865 MS.gene03411:intron 30.0%
GACACTAAAGAAAAATGTCT+AGG - chr6.2:34392265-34392284 None:intergenic 30.0%
GAGATTCGAATTAATAACTG+TGG + chr6.2:34388075-34388094 MS.gene03411:intron 30.0%
GGACAGTAGTATTTAACATA+GGG + chr6.2:34392809-34392828 MS.gene03411:intron 30.0%
GGTCTAATTATGTTCTATAC+AGG + chr6.2:34392034-34392053 MS.gene03411:intron 30.0%
GTCACTGAAAAATAAGAGAA+GGG + chr6.2:34393192-34393211 MS.gene03411:intron 30.0%
GTCTAGGAACTAAACATATT+TGG - chr6.2:34392249-34392268 None:intergenic 30.0%
GTTAGGTTATTCATCCAATT+TGG - chr6.2:34390255-34390274 None:intergenic 30.0%
GTTATGTAATTGAACTGCTA+TGG + chr6.2:34391747-34391766 MS.gene03411:intron 30.0%
GTTTAATGCATGGAGTTTAA+TGG + chr6.2:34388856-34388875 MS.gene03411:intron 30.0%
TAAGACAGAGTTTCAAACAA+CGG - chr6.2:34388483-34388502 None:intergenic 30.0%
TAGTGGTGTTTATGTCAATT+GGG + chr6.2:34387845-34387864 MS.gene03411:intron 30.0%
TATAAATCACATGGCTTCTT+TGG + chr6.2:34392510-34392529 MS.gene03411:intron 30.0%
TCAAAATACCGATAAAACCA+CGG - chr6.2:34387983-34388002 None:intergenic 30.0%
TCATTCATAACCATTGTAAG+AGG - chr6.2:34390206-34390225 None:intergenic 30.0%
TCTATACTCTCATACATACT+TGG + chr6.2:34391503-34391522 MS.gene03411:intron 30.0%
TGTCACTGAAAAATAAGAGA+AGG + chr6.2:34393191-34393210 MS.gene03411:intron 30.0%
TGTGTTTGTGTTGTAGATAT+GGG + chr6.2:34389536-34389555 MS.gene03411:intron 30.0%
TGTTTGCATATACTATCTCT+CGG + chr6.2:34392717-34392736 MS.gene03411:intron 30.0%
TTACAGATAAAAAGATAGCC+AGG - chr6.2:34392452-34392471 None:intergenic 30.0%
TTACTCAAAGTTATCGTTCT+TGG + chr6.2:34387559-34387578 MS.gene03411:CDS 30.0%
TTCTACATTTCCTCTTACAA+TGG + chr6.2:34390193-34390212 MS.gene03411:intron 30.0%
TTGTGTAGTAGATAGAGTAT+AGG + chr6.2:34392422-34392441 MS.gene03411:intron 30.0%
TTTACTAAGATTCTGTCCTT+TGG + chr6.2:34391599-34391618 MS.gene03411:intron 30.0%
TTTATAGCTATGCGTATTCA+GGG - chr6.2:34392496-34392515 None:intergenic 30.0%
TTTCAAATATCGGCATATGT+GGG + chr6.2:34389294-34389313 MS.gene03411:intron 30.0%
TTTCACAAGTAGTGAGAAAT+GGG - chr6.2:34392863-34392882 None:intergenic 30.0%
TTTCTAAACAACTGCAATTG+AGG - chr6.2:34388711-34388730 None:intergenic 30.0%
! AAAGAATGCCTTTTGCTTAT+GGG + chr6.2:34390566-34390585 MS.gene03411:intron 30.0%
! AAATTTACGAGGATTTTCAC+AGG - chr6.2:34391184-34391203 None:intergenic 30.0%
! ATAGGTTGAAAATATCTGCA+AGG - chr6.2:34393755-34393774 None:intergenic 30.0%
! CAAATAATGCCTTTTGCTTA+TGG + chr6.2:34390730-34390749 MS.gene03411:intron 30.0%
! CAGATATTTTCAACCTATTC+CGG + chr6.2:34393757-34393776 MS.gene03411:intron 30.0%
! CATTTGATACACTTGATAAC+TGG + chr6.2:34389655-34389674 MS.gene03411:CDS 30.0%
! CTACTTGTGAAAAAGTTGAT+TGG + chr6.2:34392871-34392890 MS.gene03411:intron 30.0%
! GATCGATTTAAGGTTATTCA+AGG + chr6.2:34389260-34389279 MS.gene03411:intron 30.0%
! GCAATTTTCAATATCGTGTA+GGG + chr6.2:34388041-34388060 MS.gene03411:intron 30.0%
! GTAGTAATTTTTCTGCTTGA+AGG + chr6.2:34391770-34391789 MS.gene03411:intron 30.0%
! GTGATTACGGATTTTAAACT+TGG + chr6.2:34389921-34389940 MS.gene03411:intron 30.0%
! TCGATTTTCTTCCTTCTTTT+CGG + chr6.2:34393067-34393086 MS.gene03411:intron 30.0%
! TGCTTCATTTGCATGATTTT+GGG + chr6.2:34387819-34387838 MS.gene03411:intron 30.0%
! TGTTTTCCATTTCGTTTGTT+AGG - chr6.2:34390272-34390291 None:intergenic 30.0%
! TTGCTTCATTTGCATGATTT+TGG + chr6.2:34387818-34387837 MS.gene03411:intron 30.0%
! TTTTCAAATATCGGCATATG+TGG + chr6.2:34389293-34389312 MS.gene03411:intron 30.0%
! TTTTCACAAGTAGTGAGAAA+TGG - chr6.2:34392864-34392883 None:intergenic 30.0%
!! AACAAAGTTGATATTGATGG+CGG + chr6.2:34391950-34391969 MS.gene03411:CDS 30.0%
!! CATAAGCAAAAGGCATTATT+TGG - chr6.2:34390732-34390751 None:intergenic 30.0%
!! GGAAACAAAGTTGATATTGA+TGG + chr6.2:34391947-34391966 MS.gene03411:CDS 30.0%
!! GTTTTCATTTTTGTTAGGGT+TGG + chr6.2:34387693-34387712 MS.gene03411:intron 30.0%
!! TTTTTCTCTAGCATTGAATG+TGG + chr6.2:34389148-34389167 MS.gene03411:intron 30.0%
!!! AGAAGGGTTTTAGAATGAAA+GGG + chr6.2:34393208-34393227 MS.gene03411:intron 30.0%
!!! ATCTTTTTTCCATCATTCAC+TGG + chr6.2:34391019-34391038 MS.gene03411:intron 30.0%
!!! TAATCATACCGTGGTTTTAT+CGG + chr6.2:34387972-34387991 MS.gene03411:intron 30.0%
!!! TTGGTGTTGCATTTTATAGA+GGG + chr6.2:34389589-34389608 MS.gene03411:CDS 30.0%
AAACCCTATTGTCATAGCTT+AGG + chr6.2:34388330-34388349 MS.gene03411:intron 35.0%
AAAGCCTTGACAGTATGTAA+TGG - chr6.2:34391412-34391431 None:intergenic 35.0%
AACAGTGAAGGAAACCAAAT+TGG + chr6.2:34390238-34390257 MS.gene03411:intron 35.0%
AACCCTATTGTCATAGCTTA+GGG + chr6.2:34388331-34388350 MS.gene03411:intron 35.0%
AAGAAGCTGGATCATTGTAA+TGG + chr6.2:34388640-34388659 MS.gene03411:intron 35.0%
AAGCCTTGACAGTATGTAAT+GGG - chr6.2:34391411-34391430 None:intergenic 35.0%
ACAGCTAATCTGAACTATCA+AGG - chr6.2:34391285-34391304 None:intergenic 35.0%
ACGCATAGCTATAAATCACA+TGG + chr6.2:34392501-34392520 MS.gene03411:intron 35.0%
AGAAAGGTGACAGTATAACA+TGG - chr6.2:34393665-34393684 None:intergenic 35.0%
AGTAACACTTATTTAGAGGG+GGG - chr6.2:34390380-34390399 None:intergenic 35.0%
ATACAACGGTGAAATCTGAT+GGG - chr6.2:34391001-34391020 None:intergenic 35.0%
ATTTCAAAGCAGCTGAATTG+CGG + chr6.2:34388793-34388812 MS.gene03411:intron 35.0%
CAGTAACACTTATTTAGAGG+GGG - chr6.2:34390381-34390400 None:intergenic 35.0%
CATCATTAACATTGAGGACA+AGG - chr6.2:34390481-34390500 None:intergenic 35.0%
CCCTTGGTTTATATAGAATC+TGG - chr6.2:34391121-34391140 None:intergenic 35.0%
CCTGTGACACAACATTAAAA+TGG - chr6.2:34391886-34391905 None:intergenic 35.0%
CTAAATCCAATAAGCTAGCA+TGG + chr6.2:34390502-34390521 MS.gene03411:intron 35.0%
GACAAACCATTACCACAATT+CGG - chr6.2:34388517-34388536 None:intergenic 35.0%
GAGAGTGGAATTTATGATTG+TGG + chr6.2:34387879-34387898 MS.gene03411:intron 35.0%
GAGGATAAAATGTAATGTGG+GGG - chr6.2:34390410-34390429 None:intergenic 35.0%
GGAGGATAAAATGTAATGTG+GGG - chr6.2:34390411-34390430 None:intergenic 35.0%
GGGACAGTAGTATTTAACAT+AGG + chr6.2:34392808-34392827 MS.gene03411:intron 35.0%
GGGAGGATAAAATGTAATGT+GGG - chr6.2:34390412-34390431 None:intergenic 35.0%
GGTTTCTGATAAGAAAGCAA+AGG + chr6.2:34392055-34392074 MS.gene03411:intron 35.0%
GTCAACGAGACTACTATTAT+AGG - chr6.2:34393094-34393113 None:intergenic 35.0%
GTGAATCTCTACCCTAATTA+TGG - chr6.2:34393621-34393640 None:intergenic 35.0%
GTGTCTATGAAAGGACATTA+TGG + chr6.2:34392280-34392299 MS.gene03411:intron 35.0%
GTTGCTATAAAGCAAAACCA+TGG - chr6.2:34390033-34390052 None:intergenic 35.0%
GTTGGTATCAATCTAACTGA+CGG - chr6.2:34391324-34391343 None:intergenic 35.0%
TAACCCATTACATACTGTCA+AGG + chr6.2:34391405-34391424 MS.gene03411:intron 35.0%
TAATGCATGGAGTTTAATGG+CGG + chr6.2:34388859-34388878 MS.gene03411:intron 35.0%
TACATACTGTCAAGGCTTTA+CGG + chr6.2:34391413-34391432 MS.gene03411:intron 35.0%
TACTACACAACACTACTAAC+TGG - chr6.2:34392412-34392431 None:intergenic 35.0%
TAGCAGCAAACTATGATTCT+TGG - chr6.2:34391568-34391587 None:intergenic 35.0%
TAGCCACATTAATAATGTGG+GGG - chr6.2:34390433-34390452 None:intergenic 35.0%
TATGTCATAACTCATGACCA+TGG + chr6.2:34390013-34390032 MS.gene03411:intron 35.0%
TCTATGAAAGGACATTATGG+TGG + chr6.2:34392283-34392302 MS.gene03411:intron 35.0%
TGAAGCTGGTAGTTAACATA+GGG + chr6.2:34392894-34392913 MS.gene03411:intron 35.0%
TGTCACAGTCATCGATAATA+TGG + chr6.2:34388533-34388552 MS.gene03411:intron 35.0%
TTAAATACTACTGTCCCAAG+CGG - chr6.2:34392805-34392824 None:intergenic 35.0%
TTTCTGGGTTCTATAGAGTA+AGG - chr6.2:34390322-34390341 None:intergenic 35.0%
TTTGCAGATGTCTCAAAGTA+AGG - chr6.2:34392107-34392126 None:intergenic 35.0%
! AAAAAGTTGATTGGTGAAGC+TGG + chr6.2:34392880-34392899 MS.gene03411:intron 35.0%
! ACAGTCTAAGATGCAACAAT+AGG - chr6.2:34388917-34388936 None:intergenic 35.0%
! AGCTCTAGTTCAAATTTACG+AGG - chr6.2:34391195-34391214 None:intergenic 35.0%
! AGTGTGGATACATACTTTTC+CGG + chr6.2:34391849-34391868 MS.gene03411:intron 35.0%
! ATCGTGTAGGGATGTATTTT+TGG + chr6.2:34388053-34388072 MS.gene03411:intron 35.0%
! CAAAGAATGCCTTTTGCTTA+TGG + chr6.2:34390565-34390584 MS.gene03411:intron 35.0%
! CAGATTAGCTGTTTGTACAT+TGG + chr6.2:34391293-34391312 MS.gene03411:intron 35.0%
! CAGTCTAAGATGCAACAATA+GGG - chr6.2:34388916-34388935 None:intergenic 35.0%
! CGATTTTCTTCCTTCTTTTC+GGG + chr6.2:34393068-34393087 MS.gene03411:intron 35.0%
! CGCAATTTTCAATATCGTGT+AGG + chr6.2:34388040-34388059 MS.gene03411:intron 35.0%
! GTAGAGGATTAGTGTGATTA+CGG + chr6.2:34389908-34389927 MS.gene03411:intron 35.0%
! TATCGCGATTTTCAATATCG+CGG + chr6.2:34388185-34388204 MS.gene03411:intron 35.0%
!! AACTCTGTCTTATTTCAGAG+TGG + chr6.2:34388491-34388510 MS.gene03411:intron 35.0%
!! ACAAAGTTGATATTGATGGC+GGG + chr6.2:34391951-34391970 MS.gene03411:CDS 35.0%
!! ACAGTATGTAATGGGTTACA+AGG - chr6.2:34391403-34391422 None:intergenic 35.0%
!! CATAAGCAAAAGGCATTCTT+TGG - chr6.2:34390567-34390586 None:intergenic 35.0%
!! CCATTTTAATGTTGTGTCAC+AGG + chr6.2:34391883-34391902 MS.gene03411:intron 35.0%
!! GAAAAGTGCTTGGATTAGAA+GGG - chr6.2:34391913-34391932 None:intergenic 35.0%
!! TTACTTTGAGACATCTGCAA+AGG + chr6.2:34392106-34392125 MS.gene03411:CDS 35.0%
!! TTCAATATTGGGTTGAATGG+TGG + chr6.2:34388243-34388262 MS.gene03411:intron 35.0%
!!! CATAGTTTGCTGCTAGTTTT+TGG + chr6.2:34391573-34391592 MS.gene03411:intron 35.0%
!!! CTTGGTGTTGCATTTTATAG+AGG + chr6.2:34389588-34389607 MS.gene03411:CDS 35.0%
!!! GAGAAGGGTTTTAGAATGAA+AGG + chr6.2:34393207-34393226 MS.gene03411:intron 35.0%
!!! TGGTGTTGCATTTTATAGAG+GGG + chr6.2:34389590-34389609 MS.gene03411:CDS 35.0%
!!! TTTCTCATTGTTGGTGGTTT+TGG + chr6.2:34390943-34390962 MS.gene03411:intron 35.0%
AAAGCTGCCAGTTAACATAG+GGG + chr6.2:34392775-34392794 MS.gene03411:intron 40.0%
AAGATGAAACAGGGGTCTTA+TGG + chr6.2:34393249-34393268 MS.gene03411:intron 40.0%
AATTCTTCATCTCCTGCTCA+AGG + chr6.2:34392012-34392031 MS.gene03411:intron 40.0%
ACAAAGCTGCCAGTTAACAT+AGG + chr6.2:34392773-34392792 MS.gene03411:intron 40.0%
ACACCCTAAGCTATGACAAT+AGG - chr6.2:34388337-34388356 None:intergenic 40.0%
ACATAATTAGACCCTTGAGC+AGG - chr6.2:34392027-34392046 None:intergenic 40.0%
ACCAAAAACATCCATGATCC+GGG - chr6.2:34391673-34391692 None:intergenic 40.0%
ACCAACTAACCTAACTGATG+GGG - chr6.2:34393145-34393164 None:intergenic 40.0%
ACTATATCCGAATGCACATC+TGG + chr6.2:34387930-34387949 MS.gene03411:intron 40.0%
AGCCACATTAATAATGTGGG+GGG - chr6.2:34390432-34390451 None:intergenic 40.0%
AGTCAACGAACTTCAACATC+CGG - chr6.2:34391808-34391827 None:intergenic 40.0%
ATCAACGGAGAAAACAGTGA+AGG + chr6.2:34390226-34390245 MS.gene03411:intron 40.0%
ATTCTTCATCTCCTGCTCAA+GGG + chr6.2:34392013-34392032 MS.gene03411:intron 40.0%
CAAAGCTGCCAGTTAACATA+GGG + chr6.2:34392774-34392793 MS.gene03411:intron 40.0%
CACCAAAAACATCCATGATC+CGG - chr6.2:34391674-34391693 None:intergenic 40.0%
CACCCTAAGCTATGACAATA+GGG - chr6.2:34388336-34388355 None:intergenic 40.0%
CAGAGTCCATATCAAACAGT+GGG - chr6.2:34390529-34390548 None:intergenic 40.0%
CAGATAAAAAGATAGCCAGG+AGG - chr6.2:34392449-34392468 None:intergenic 40.0%
CAGCTACATAAAGCCATAAC+TGG - chr6.2:34392840-34392859 None:intergenic 40.0%
CAGGAGAGATTTCAAAGTCT+TGG + chr6.2:34389570-34389589 MS.gene03411:CDS 40.0%
CAGTCTGATCTGCAACATTA+TGG - chr6.2:34388741-34388760 None:intergenic 40.0%
CCACCAACAATGAGAAAACT+TGG - chr6.2:34390940-34390959 None:intergenic 40.0%
CCACTTGTAGAGTAACTAGT+CGG - chr6.2:34389420-34389439 None:intergenic 40.0%
CCTCATTTCTTCATGTGTAG+AGG + chr6.2:34389892-34389911 MS.gene03411:intron 40.0%
CCTCTACACATGAAGAAATG+AGG - chr6.2:34389895-34389914 None:intergenic 40.0%
CTATTATAGGCCCGAAAAGA+AGG - chr6.2:34393081-34393100 None:intergenic 40.0%
CTGATAAGAAAGCAAAGGAG+TGG + chr6.2:34392060-34392079 MS.gene03411:CDS 40.0%
CTTCATTTCATGGACAGCTT+TGG + chr6.2:34390692-34390711 MS.gene03411:intron 40.0%
GAAGCTGGTAGTTAACATAG+GGG + chr6.2:34392895-34392914 MS.gene03411:intron 40.0%
GACAAGAAAAGGACATCCAA+AGG - chr6.2:34391618-34391637 None:intergenic 40.0%
GACCAACTAACCTAACTGAT+GGG - chr6.2:34393146-34393165 None:intergenic 40.0%
GAGTAAAGTTCTTCTGCGTA+AGG - chr6.2:34387545-34387564 None:intergenic 40.0%
GAGTTAGTTAAAGTGAGTGC+AGG - chr6.2:34391346-34391365 None:intergenic 40.0%
GATACAACGGTGAAATCTGA+TGG - chr6.2:34391002-34391021 None:intergenic 40.0%
GGAAAAACAGAAGCTGACTA+AGG - chr6.2:34391048-34391067 None:intergenic 40.0%
GGAGAACTGTGTTTAAATCG+CGG + chr6.2:34388554-34388573 MS.gene03411:intron 40.0%
GGGGAGGATAAAATGTAATG+TGG - chr6.2:34390413-34390432 None:intergenic 40.0%
GTACAGTTTAGCATAGAGTC+AGG - chr6.2:34390652-34390671 None:intergenic 40.0%
GTCATCGATCTGCAATTCTT+TGG - chr6.2:34389398-34389417 None:intergenic 40.0%
GTGAAGCTGGTAGTTAACAT+AGG + chr6.2:34392893-34392912 MS.gene03411:intron 40.0%
GTTTCTCTGTATTATGCTGC+TGG - chr6.2:34390612-34390631 None:intergenic 40.0%
TAAATACTACTGTCCCAAGC+GGG - chr6.2:34392804-34392823 None:intergenic 40.0%
TAGTTAAAGTGAGTGCAGGT+TGG - chr6.2:34391342-34391361 None:intergenic 40.0%
TCCAACCAAATTGTACGTAG+AGG - chr6.2:34390886-34390905 None:intergenic 40.0%
TCCTCTACGTACAATTTGGT+TGG + chr6.2:34390882-34390901 MS.gene03411:intron 40.0%
TGACCAACTAACCTAACTGA+TGG - chr6.2:34393147-34393166 None:intergenic 40.0%
TGGAAATTGGTAGGTAGAAG+TGG + chr6.2:34389068-34389087 MS.gene03411:intron 40.0%
TGTCAATTGGGATGCATTGT+TGG + chr6.2:34387857-34387876 MS.gene03411:intron 40.0%
TTATCGTTCTTGGAGACAGT+GGG + chr6.2:34387569-34387588 MS.gene03411:CDS 40.0%
TTTGATACCGTGGAGATTTG+TGG + chr6.2:34388280-34388299 MS.gene03411:intron 40.0%
! AGGACAAGGTGAAACTTGTT+GGG - chr6.2:34390467-34390486 None:intergenic 40.0%
! AGGCCAAGTTTTCTCATTGT+TGG + chr6.2:34390934-34390953 MS.gene03411:intron 40.0%
! CCAAGTTTTCTCATTGTTGG+TGG + chr6.2:34390937-34390956 MS.gene03411:intron 40.0%
! CGACTAGTTACTCTACAAGT+GGG + chr6.2:34389418-34389437 MS.gene03411:intron 40.0%
! CTTGACGAGATTTTGAATCG+CGG + chr6.2:34388145-34388164 MS.gene03411:intron 40.0%
! GTAAGGAATGTTCCCTTTTG+AGG - chr6.2:34392090-34392109 None:intergenic 40.0%
! GTATCACCCTAATTTTGTGC+CGG - chr6.2:34389175-34389194 None:intergenic 40.0%
! GTATGTCACTTCAAAGAAGC+TGG + chr6.2:34388627-34388646 MS.gene03411:intron 40.0%
! TATCGCGATTTTTGATACCG+TGG + chr6.2:34388270-34388289 MS.gene03411:intron 40.0%
!! AGCTGCTTTGAAATGAGACA+CGG - chr6.2:34388787-34388806 None:intergenic 40.0%
!! GGAAAAGTGCTTGGATTAGA+AGG - chr6.2:34391914-34391933 None:intergenic 40.0%
!! TGCATGATTTTGGGTCATAG+TGG + chr6.2:34387828-34387847 MS.gene03411:intron 40.0%
!! TTGAATATCTCGGAGTGTTG+TGG + chr6.2:34387999-34388018 MS.gene03411:intron 40.0%
!!! GGTTTTAGAATGAAAGGGAG+AGG + chr6.2:34393213-34393232 MS.gene03411:intron 40.0%
AACGAACTTCAACATCCGGT+GGG - chr6.2:34391804-34391823 None:intergenic 45.0%
AAGCAGCTGAATTGCGGTAA+TGG + chr6.2:34388799-34388818 MS.gene03411:intron 45.0%
ACAGTGATGAACCACAGAGA+AGG + chr6.2:34390289-34390308 MS.gene03411:intron 45.0%
AGAAGCTGTCATGCAGAGAA+TGG - chr6.2:34391069-34391088 None:intergenic 45.0%
AGATAGAGTATAGGACCTCC+TGG + chr6.2:34392431-34392450 MS.gene03411:intron 45.0%
AGGTCTGCGACTACAACATT+AGG - chr6.2:34388593-34388612 None:intergenic 45.0%
ATAGAGTCAGGATGCTGGAA+AGG - chr6.2:34390640-34390659 None:intergenic 45.0%
ATGATGTCCTTGCCTCATCA+TGG - chr6.2:34393370-34393389 None:intergenic 45.0%
ATGTGGTCCGGCACAAAATT+AGG + chr6.2:34389165-34389184 MS.gene03411:intron 45.0%
ATTGAGCCGTTACGAGATTG+AGG + chr6.2:34393326-34393345 MS.gene03411:intron 45.0%
ATTTCAGAGTGGCCGAATTG+TGG + chr6.2:34388502-34388521 MS.gene03411:intron 45.0%
CAAACCTCAAACGCACTCAA+AGG - chr6.2:34389820-34389839 None:intergenic 45.0%
CACATTAATAATGTGGGGGG+AGG - chr6.2:34390429-34390448 None:intergenic 45.0%
CAGACTCATTGCACTCTTAG+AGG + chr6.2:34390914-34390933 MS.gene03411:intron 45.0%
CAGTGATGAACCACAGAGAA+GGG + chr6.2:34390290-34390309 MS.gene03411:intron 45.0%
CATCCTGCTACATGTTATCC+CGG + chr6.2:34393538-34393557 MS.gene03411:intron 45.0%
CATGGTCCCACTGTTTGATA+TGG + chr6.2:34390520-34390539 MS.gene03411:intron 45.0%
CATGTCTTGCTCACGTTCAT+TGG - chr6.2:34392183-34392202 None:intergenic 45.0%
CCAAATATCCCCCATCAGTT+AGG + chr6.2:34393133-34393152 MS.gene03411:intron 45.0%
CCAACTAACCTAACTGATGG+GGG - chr6.2:34393144-34393163 None:intergenic 45.0%
CCTAACTGATGGGGGATATT+TGG - chr6.2:34393136-34393155 None:intergenic 45.0%
CTAAGGCAACCAGTGAATGA+TGG - chr6.2:34391031-34391050 None:intergenic 45.0%
CTCAATCGCAGCACAAAACA+CGG - chr6.2:34393312-34393331 None:intergenic 45.0%
CTCCCCCCACATTATTAATG+TGG + chr6.2:34390427-34390446 MS.gene03411:intron 45.0%
CTCCTCTTGGATGGTAATAC+AGG - chr6.2:34390167-34390186 None:intergenic 45.0%
CTGTATTACCATCCAAGAGG+AGG + chr6.2:34390165-34390184 MS.gene03411:intron 45.0%
GAATTGCGGTAATCATACCG+TGG + chr6.2:34387963-34387982 MS.gene03411:intron 45.0%
GACATCATGCATGAATGTGC+AGG + chr6.2:34393382-34393401 MS.gene03411:intron 45.0%
GACCCTGTTCCAAAGCAAAT+GGG - chr6.2:34390969-34390988 None:intergenic 45.0%
GACCTGTATTACCATCCAAG+AGG + chr6.2:34390162-34390181 MS.gene03411:intron 45.0%
GAGGACAAGGTGAAACTTGT+TGG - chr6.2:34390468-34390487 None:intergenic 45.0%
GAGTTATGCAGTTCCTGAGT+GGG - chr6.2:34390345-34390364 None:intergenic 45.0%
GATTCCTTTGAGTGCGTTTG+AGG + chr6.2:34389813-34389832 MS.gene03411:intron 45.0%
GCAGAGTCCATATCAAACAG+TGG - chr6.2:34390530-34390549 None:intergenic 45.0%
GGCGGTTTCAATCAATGTTG+TGG + chr6.2:34388877-34388896 MS.gene03411:intron 45.0%
GGCTTCCTCTACGTACAATT+TGG + chr6.2:34390878-34390897 MS.gene03411:intron 45.0%
GGTAAAATACTGCCTCGATC+AGG + chr6.2:34388405-34388424 MS.gene03411:intron 45.0%
GGTCTGCGACTACAACATTA+GGG - chr6.2:34388592-34388611 None:intergenic 45.0%
GTGCAAACGCTCAGAAATCA+AGG + chr6.2:34393276-34393295 MS.gene03411:intron 45.0%
GTTATCGTTCTTGGAGACAG+TGG + chr6.2:34387568-34387587 MS.gene03411:CDS 45.0%
TCTGTATTATGCTGCTGGAC+AGG - chr6.2:34390607-34390626 None:intergenic 45.0%
TCTGTGCCTCAATCTCGTAA+CGG - chr6.2:34393335-34393354 None:intergenic 45.0%
TGTAGAACCAATCCTCCTCT+TGG - chr6.2:34390180-34390199 None:intergenic 45.0%
TGTAGATATGGGACACTGCA+GGG + chr6.2:34389547-34389566 MS.gene03411:intron 45.0%
TGTAGCCGAATCCACTTAGT+GGG + chr6.2:34392324-34392343 MS.gene03411:intron 45.0%
TGTGGTCCGGCACAAAATTA+GGG + chr6.2:34389166-34389185 MS.gene03411:intron 45.0%
TGTTCCAGAGAATGAGCAGA+GGG + chr6.2:34393787-34393806 MS.gene03411:CDS 45.0%
TTACCATCCAAGAGGAGGAT+TGG + chr6.2:34390170-34390189 MS.gene03411:intron 45.0%
TTAGCATAGAGTCAGGATGC+TGG - chr6.2:34390645-34390664 None:intergenic 45.0%
TTCAATATCGCGGAGAGTTG+TGG + chr6.2:34388195-34388214 MS.gene03411:intron 45.0%
TTCTTCCTACTGTCCCAAGT+GGG - chr6.2:34392924-34392943 None:intergenic 45.0%
TTGTAGATATGGGACACTGC+AGG + chr6.2:34389546-34389565 MS.gene03411:intron 45.0%
TTGTAGCCGAATCCACTTAG+TGG + chr6.2:34392323-34392342 MS.gene03411:intron 45.0%
TTGTTCCAGAGAATGAGCAG+AGG + chr6.2:34393786-34393805 MS.gene03411:CDS 45.0%
! AATGCCTTTTGCTTATGGGC+TGG + chr6.2:34390570-34390589 MS.gene03411:intron 45.0%
! ACCCGGATCATGGATGTTTT+TGG + chr6.2:34391669-34391688 MS.gene03411:intron 45.0%
! CCGACTAGTTACTCTACAAG+TGG + chr6.2:34389417-34389436 MS.gene03411:intron 45.0%
! CTCACGTTCATTGGCTAATG+CGG - chr6.2:34392174-34392193 None:intergenic 45.0%
! CTCTAGCATTGAATGTGGTC+CGG + chr6.2:34389153-34389172 MS.gene03411:intron 45.0%
! CTGGCCGAGATTTTGAATTG+CGG + chr6.2:34387949-34387968 MS.gene03411:intron 45.0%
! CTTCTCCCACTAAGTGGATT+CGG - chr6.2:34392332-34392351 None:intergenic 45.0%
! GAAACTCTGCTCGGTGATAT+TGG - chr6.2:34391446-34391465 None:intergenic 45.0%
! GAAATCTGATGGGTACCAAC+TGG - chr6.2:34390991-34391010 None:intergenic 45.0%
! TACACTTGATAACTGGCACG+AGG + chr6.2:34389662-34389681 MS.gene03411:CDS 45.0%
! TGATGGGGGATATTTGGAGT+TGG - chr6.2:34393130-34393149 None:intergenic 45.0%
! TTCATTGGCTAATGCGGTCT+TGG - chr6.2:34392168-34392187 None:intergenic 45.0%
!! AAGAAGCACTTCAGCGTGAA+TGG + chr6.2:34392939-34392958 MS.gene03411:intron 45.0%
!! AGGCACTGGTTAGTTTCTGA+CGG - chr6.2:34391383-34391402 None:intergenic 45.0%
!! CAAAGCACTGAAACTCTGCT+CGG - chr6.2:34391455-34391474 None:intergenic 45.0%
!! GACAAGGTGAAACTTGTTGG+GGG - chr6.2:34390465-34390484 None:intergenic 45.0%
!! GGACAAGGTGAAACTTGTTG+GGG - chr6.2:34390466-34390485 None:intergenic 45.0%
!! TGCTCATTCTCTGGAACAAC+AGG - chr6.2:34393785-34393804 None:intergenic 45.0%
!! TGTAATGGGTTACAAGGCAC+TGG - chr6.2:34391397-34391416 None:intergenic 45.0%
!!! TGGTTTTGGCCCATTTGCTT+TGG + chr6.2:34390957-34390976 MS.gene03411:intron 45.0%
AACATAGGGGACTCCCACTT+GGG + chr6.2:34392908-34392927 MS.gene03411:intron 50.0%
AAGGAGTGGTGTGCCTCAAA+AGG + chr6.2:34392074-34392093 MS.gene03411:CDS 50.0%
AAGGAGTTGACCCTTCTCTG+TGG - chr6.2:34390303-34390322 None:intergenic 50.0%
ACTGTCAAGGCTTTACGGAC+TGG + chr6.2:34391418-34391437 MS.gene03411:intron 50.0%
AGGAGTGGTGTGCCTCAAAA+GGG + chr6.2:34392075-34392094 MS.gene03411:CDS 50.0%
AGTGCTTGTGCAGAGAGCAA+GGG - chr6.2:34391144-34391163 None:intergenic 50.0%
ATCGAGGCCACAAATCTCCA+CGG - chr6.2:34388290-34388309 None:intergenic 50.0%
ATCTCGGCCAGATGTGCATT+CGG - chr6.2:34387940-34387959 None:intergenic 50.0%
ATGCGGTCTTGGCAATACGT+AGG - chr6.2:34392157-34392176 None:intergenic 50.0%
ATGTTATCCCGGCTGTTGTC+CGG + chr6.2:34393549-34393568 MS.gene03411:intron 50.0%
CAACGAACTTCAACATCCGG+TGG - chr6.2:34391805-34391824 None:intergenic 50.0%
CCCCCATCAGTTAGGTTAGT+TGG + chr6.2:34393141-34393160 MS.gene03411:intron 50.0%
CGAATCCACTTAGTGGGAGA+AGG + chr6.2:34392330-34392349 MS.gene03411:intron 50.0%
CGGGATAACATGTAGCAGGA+TGG - chr6.2:34393540-34393559 None:intergenic 50.0%
CTTCTTCCTACTGTCCCAAG+TGG - chr6.2:34392925-34392944 None:intergenic 50.0%
GAACCAATCCTCCTCTTGGA+TGG - chr6.2:34390176-34390195 None:intergenic 50.0%
GAGTGGCCGAATTGTGGTAA+TGG + chr6.2:34388508-34388527 MS.gene03411:intron 50.0%
GCAGTTACTGGACCATGATG+AGG + chr6.2:34393355-34393374 MS.gene03411:intron 50.0%
GGACCCTGTTCCAAAGCAAA+TGG - chr6.2:34390970-34390989 None:intergenic 50.0%
GGAGTTATGCAGTTCCTGAG+TGG - chr6.2:34390346-34390365 None:intergenic 50.0%
GGATTCGGCTACAAGCTACA+TGG - chr6.2:34392317-34392336 None:intergenic 50.0%
GTTCCAGAGAATGAGCAGAG+GGG + chr6.2:34393788-34393807 MS.gene03411:CDS 50.0%
GTTGTCAATCCCAGTCAAGC+CGG - chr6.2:34393571-34393590 None:intergenic 50.0%
TAACATAGGGGACTCCCACT+TGG + chr6.2:34392907-34392926 MS.gene03411:intron 50.0%
TACTGCCTCGATCAGGATAG+CGG + chr6.2:34388412-34388431 MS.gene03411:intron 50.0%
TACTGGACCATGATGAGGCA+AGG + chr6.2:34393360-34393379 MS.gene03411:intron 50.0%
TAGAACCCAGAAACCCACTC+AGG + chr6.2:34390329-34390348 MS.gene03411:intron 50.0%
TCAGCCACTAGCAAAACTGC+CGG - chr6.2:34391094-34391113 None:intergenic 50.0%
TCCTTTGGGCAAGAAGACTC+AGG - chr6.2:34392543-34392562 None:intergenic 50.0%
TCTGCATGACAGCTTCTACC+CGG + chr6.2:34391072-34391091 MS.gene03411:intron 50.0%
TGGGATGCATTGTTGGAGAG+TGG + chr6.2:34387864-34387883 MS.gene03411:intron 50.0%
TGGTCCAGCCCATAAGCAAA+AGG - chr6.2:34390577-34390596 None:intergenic 50.0%
TTAGAGGGGGGCAACGAATT+GGG - chr6.2:34390368-34390387 None:intergenic 50.0%
TTGAGGCACAGAGCAGTTAC+TGG + chr6.2:34393343-34393362 MS.gene03411:intron 50.0%
TTTAGAGGGGGGCAACGAAT+TGG - chr6.2:34390369-34390388 None:intergenic 50.0%
TTTCCCAGCGATTGCAATCG+AGG - chr6.2:34388306-34388325 None:intergenic 50.0%
TTTCTCCGCTATCCTGATCG+AGG - chr6.2:34388420-34388439 None:intergenic 50.0%
! CAGTTCCTGAGTGGGTTTCT+GGG - chr6.2:34390337-34390356 None:intergenic 50.0%
! GAAACAGGGGTCTTATGGCA+TGG + chr6.2:34393254-34393273 MS.gene03411:intron 50.0%
! GCAGTTTTGCTAGTGGCTGA+AGG + chr6.2:34391094-34391113 MS.gene03411:intron 50.0%
! GCTGCTGGACAGGAAGATTT+TGG - chr6.2:34390597-34390616 None:intergenic 50.0%
! GTGGGACCATGCTAGCTTAT+TGG - chr6.2:34390511-34390530 None:intergenic 50.0%
!! ACATAGGGTGCTGCCAGTTA+TGG + chr6.2:34392824-34392843 MS.gene03411:intron 50.0%
!! GCACGAGGAGTTTCTGAAAC+AGG + chr6.2:34389677-34389696 MS.gene03411:CDS 50.0%
!! GGCCCATTTGCTTTGGAACA+GGG + chr6.2:34390964-34390983 MS.gene03411:intron 50.0%
!! TGGCCCATTTGCTTTGGAAC+AGG + chr6.2:34390963-34390982 MS.gene03411:intron 50.0%
!! TTCTCTGGAACAACAGGCTC+CGG - chr6.2:34393779-34393798 None:intergenic 50.0%
!! TTGAAGGCATTTGAGCCCAC+CGG + chr6.2:34391786-34391805 MS.gene03411:intron 50.0%
AACATAGGGGACTCCCGCTT+GGG + chr6.2:34392788-34392807 MS.gene03411:intron 55.0%
CAGCCACTAGCAAAACTGCC+GGG - chr6.2:34391093-34391112 None:intergenic 55.0%
CAGCCGGGATAACATGTAGC+AGG - chr6.2:34393544-34393563 None:intergenic 55.0%
CCAAGCCTTCTCCCACTAAG+TGG - chr6.2:34392338-34392357 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG + chr6.2:34392335-34392354 MS.gene03411:intron 55.0%
CGGGAGTCCCCTATGTTAAC+TGG - chr6.2:34392785-34392804 None:intergenic 55.0%
GAGTGCTTGTGCAGAGAGCA+AGG - chr6.2:34391145-34391164 None:intergenic 55.0%
GCCTGAGTCTTCTTGCCCAA+AGG + chr6.2:34392539-34392558 MS.gene03411:intron 55.0%
GGAACAACAGGCTCCGGAAT+AGG - chr6.2:34393773-34393792 None:intergenic 55.0%
TAACATAGGGGACTCCCGCT+TGG + chr6.2:34392787-34392806 MS.gene03411:intron 55.0%
TAGAGGGGGGCAACGAATTG+GGG - chr6.2:34390367-34390386 None:intergenic 55.0%
TGGCCTCGATTGCAATCGCT+GGG + chr6.2:34388300-34388319 MS.gene03411:intron 55.0%
! CTACCCGGCAGTTTTGCTAG+TGG + chr6.2:34391087-34391106 MS.gene03411:intron 55.0%
! GCAGTTCCTGAGTGGGTTTC+TGG - chr6.2:34390338-34390357 None:intergenic 55.0%
!! GCTTTGGAACAGGGTCCAGT+TGG + chr6.2:34390973-34390992 MS.gene03411:intron 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG + chr6.2:34391964-34391983 MS.gene03411:CDS 55.0%
AGTCAAGCCGGACAACAGCC+GGG - chr6.2:34393559-34393578 None:intergenic 60.0%
CAGTCAAGCCGGACAACAGC+CGG - chr6.2:34393560-34393579 None:intergenic 60.0%
CCACCCCTCTGCTCATTCTC+TGG - chr6.2:34393794-34393813 None:intergenic 60.0%
CCAGAGAATGAGCAGAGGGG+TGG + chr6.2:34393791-34393810 MS.gene03411:CDS 60.0%
GATATGGGACACTGCAGGGC+AGG + chr6.2:34389551-34389570 MS.gene03411:intron 60.0%
GGACTCCCACTTGGGACAGT+AGG + chr6.2:34392916-34392935 MS.gene03411:intron 60.0%
GGCGGGAATAGTCGAGTGGT+AGG + chr6.2:34391968-34391987 MS.gene03411:intron 60.0%
GTGGCCTCGATTGCAATCGC+TGG + chr6.2:34388299-34388318 MS.gene03411:intron 60.0%
! GGCTGTTGTCCGGCTTGACT+GGG + chr6.2:34393559-34393578 MS.gene03411:intron 60.0%
GTGCAGAGAGCAAGGGCCCT+TGG - chr6.2:34391137-34391156 None:intergenic 65.0%
! CGGCTGTTGTCCGGCTTGAC+TGG + chr6.2:34393558-34393577 MS.gene03411:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 34387538 34393826 34387538 ID=MS.gene03411
chr6.2 mRNA 34387538 34393826 34387538 ID=MS.gene03411.t1;Parent=MS.gene03411
chr6.2 exon 34387538 34387590 34387538 ID=MS.gene03411.t1.exon1;Parent=MS.gene03411.t1
chr6.2 CDS 34387538 34387590 34387538 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
chr6.2 exon 34387710 34387736 34387710 ID=MS.gene03411.t1.exon2;Parent=MS.gene03411.t1
chr6.2 CDS 34387710 34387736 34387710 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
chr6.2 exon 34389336 34389435 34389336 ID=MS.gene03411.t1.exon3;Parent=MS.gene03411.t1
chr6.2 CDS 34389336 34389435 34389336 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
chr6.2 exon 34389552 34389698 34389552 ID=MS.gene03411.t1.exon4;Parent=MS.gene03411.t1
chr6.2 CDS 34389552 34389698 34389552 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
chr6.2 exon 34391905 34391985 34391905 ID=MS.gene03411.t1.exon5;Parent=MS.gene03411.t1
chr6.2 CDS 34391905 34391985 34391905 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
chr6.2 exon 34392056 34392201 34392056 ID=MS.gene03411.t1.exon6;Parent=MS.gene03411.t1
chr6.2 CDS 34392056 34392201 34392056 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
chr6.2 exon 34393760 34393826 34393760 ID=MS.gene03411.t1.exon7;Parent=MS.gene03411.t1
chr6.2 CDS 34393760 34393826 34393760 ID=cds.MS.gene03411.t1;Parent=MS.gene03411.t1
Gene Sequence

>MS.gene03411

ATGGCCTTACGCAGAAGAACTTTACTCAAAGTTATCGTTCTTGGAGACAGTGGGTACGTTCCTAATCCACAAACTTCATTTTCAGTTTTTTTTTTTTTTTTTTACTTTTTCTCTAACATGATTTTGTTTTCATTTTTGTTCTCTAACGTGATTTTGTTTTCATTTTTGTTAGGGTTGGAAAAACTTCGTTGATGAATCAGTATCCTTTGCAATTTTATGATTTGGTATTTGATTAATTTTTTTATTTTATTATTATTATTACTCATTTGATTTTAGTTTATTGCTTCATTTGCATGATTTTGGGTCATAGTGGTGTTTATGTCAATTGGGATGCATTGTTGGAGAGTGGAATTTATGATTGTGGTTGAGAAGTTGTGTTTAATTTGATTTTTACTATATCCGAATGCACATCTGGCCGAGATTTTGAATTGCGGTAATCATACCGTGGTTTTATCGGTATTTTGAATATCTCGGAGTGTTGTGGTTGTATTGTAGATTTTATCGCAATTTTCAATATCGTGTAGGGATGTATTTTTGGAGATTCGAATTAATAACTGTGGTTGAGAATTTGAGTTGAATTTAATTTTTACTATTTTCGAATGCATCTCTTGACGAGATTTTGAATCGCGGTAATCATATCGTGATTTTATCGCGATTTTCAATATCGCGGAGAGTTGTGGTTGTATTGTAGATTTTATCGCAATTTTCAATATTGGGTTGAATGGTGGTTTTTATCGCGATTTTTGATACCGTGGAGATTTGTGGCCTCGATTGCAATCGCTGGGAAATCAGAAACCCTATTGTCATAGCTTAGGGTGTAGTCTCAAAACTTTATTTATCGTGATCTTTGATATTGATGAGAATTGGGGTAAAATACTGCCTCGATCAGGATAGCGGAGAAATTGAGAACTCTAATGTTGTAGTTTAGATCGTAGTTGTGCACCGTTGTTTGAAACTCTGTCTTATTTCAGAGTGGCCGAATTGTGGTAATGGTTTGTCACAGTCATCGATAATATGGAGAACTGTGTTTAAATCGCGGAGAAATAAAAAACCCTAATGTTGTAGTCGCAGACCTTTATGTAAAACTCTGTATGTCACTTCAAAGAAGCTGGATCATTGTAATGGTTAGTCACAATCTTTGATATTGCTGAGAATTGTAGTGAAACTGAGCCTCAATTGCAGTTGTTTAGAAATTATAAGCCATAATGTTGCAGATCAGACTGTAGTTGTAGACTTCTATTCGAAACCGTGTCTCATTTCAAAGCAGCTGAATTGCGGTAATGGTTCATCGTGATCTTTGATATTGCTGACAATTGTAGTTTAATGCATGGAGTTTAATGGCGGTTTCAATCAATGTTGTGGAGAAATAAAAAAACCCTATTGTTGCATCTTAGACTGTAGTCCCAGATCTTTATTTAAAACTGTATCACTTCAGAGCAGCTAAATACATTAATGAGCCATTGAAATTTTAAATAATAGAGGGCAAATACTATTTGGCATACTCAATGAATTAGCATGCTTAATGAATATTGGAAATTGGTAGGTAGAAGTGGTCCTTACGATTTTCTCTGAAATTATGGCTTTTAGCACTACTCTAAAATGTATTGTTGTTTTTCTCTAGCATTGAATGTGGTCCGGCACAAAATTAGGGTGATACACATTTAATGTTGCTGAGTTTCTTTAAATATTACGCTTCTGTAAAACTTATGATTATTTGATTTAGATCGATTTAAGGTTATTCAAGGACTATTTTATTTTTCAAATATCGGCATATGTGGGCCATTAACTACTTGTATAGATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGACTTTGTAACCAAAGAATTGCAGATCGATGACCGACTAGTTACTCTACAAGTGGGTTTTCTAGTTCATTGTTATTTCAGTATTATTTTTTTTATATTGTGTTTAAGATTATTATAATTATAATGTAAATTATGTATATTTTAATGATTTATGTGTTTGTGTTGTAGATATGGGACACTGCAGGGCAGGAGAGATTTCAAAGTCTTGGTGTTGCATTTTATAGAGGGGCTGATTGCTGTGTTCTCGTTTACGATGTTAATGTGATGAAGTCATTTGATACACTTGATAACTGGCACGAGGAGTTTCTGAAACAGGTTTACTATGTCTCCTCTATTTTTCTAATTTTGTCACTCTCGGTGATTTGCATGCTAACACTCTTTCAAATGTTGAGTCCAAATAAATTATAGGCTATACATATAAAAGAAATAGATTCCTTTGAGTGCGTTTGAGGTTTGTGAGACAAATTCTGAATATAAGCTGCTTTGAAATTATGATGACAATGGAGAACCTCATTTCTTCATGTGTAGAGGATTAGTGTGATTACGGATTTTAAACTTGGCATTATACTTACTTATTGCAGTAGAAATTGATTATGATTATTTCATATAGCTTTCATATGTTAATTATATATGTCATAACTCATGACCATGGTTTTGCTTTATAGCAACTTCTCCAATAGTTTGTTGAGACAATTGTTGCATCTGAATGTTTCTTGTGACGTTAAACAATAACATAAACATAGCTTAATTCTCCAGTATTTAGTTCTTACTTGTCTTGGACCTGTATTACCATCCAAGAGGAGGATTGGTTCTACATTTCCTCTTACAATGGTTATGAATGAATCAACGGAGAAAACAGTGAAGGAAACCAAATTGGATGAATAACCTAACAAACGAAATGGAAAACAGTGATGAACCACAGAGAAGGGTCAACTCCTTACTCTATAGAACCCAGAAACCCACTCAGGAACTGCATAACTCCCCAATTCGTTGCCCCCCTCTAAATAAGTGTTACTGTTACTTCCCCCACATTACATTTTATCCTCCCCCCACATTATTAATGTGGCTATAAATACTTCCCCCAACAAGTTTCACCTTGTCCTCAATGTTAATGATGACTAAATCCAATAAGCTAGCATGGTCCCACTGTTTGATATGGACTCTGCCCATTATTATTTCACCAAAGAATGCCTTTTGCTTATGGGCTGGACCAAAATCTTCCTGTCCAGCAGCATAATACAGAGAAACATCTGCCTTTCCAGCATCCTGACTCTATGCTAAACTGTACGTAGCCCATTAATACTATAACTTCATTTCATGGACAGCTTTGCCCATTATTATTTCACCAAATAATGCCTTTTGCTTATGGGCTGGACCAAAATCTTCCTGTCCAGCAGCATAATACAGAGAAACATCTGCCTTTCCAGCATCCTGACTCTATGCTAAACTGTACGTAGCCCATTAATACTATAACTTCATTTCATGGACAGCTTTGGCTTCCTCTACGTACAATTTGGTTGGACTAGTAATCAGACTCATTGCACTCTTAGAGGCCAAGTTTTCTCATTGTTGGTGGTTTTGGCCCATTTGCTTTGGAACAGGGTCCAGTTGGTACCCATCAGATTTCACCGTTGTATCTTTTTTCCATCATTCACTGGTTGCCTTAGTCAGCTTCTGTTTTTCCATTCTCTGCATGACAGCTTCTACCCGGCAGTTTTGCTAGTGGCTGAAGGACCAGATTCTATATAAACCAAGGGCCCTTGCTCTCTGCACAAGCACTCAAGTGAAAATTAATGGCCTGTGAAAATCCTCGTAAATTTGAACTAGAGCTCCATGACTATATTAAAGATAAGAAAATGATAGGGAATTTTCATATATTTATGGGTTCTCAAGATTGACCTTGATAGTTCAGATTAGCTGTTTGTACATTGGCTTATCCGTCAGTTAGATTGATACCAACCTGCACTCACTTTAACTAACTCTGAACAATTTAAAACCGTCAGAAACTAACCAGTGCCTTGTAACCCATTACATACTGTCAAGGCTTTACGGACTGGTGCCAATATCACCGAGCAGAGTTTCAGTGCTTTGAGACAACAGTGCCTTAGATGAACTATTTTCTATACTCTCATACATACTTGGTTCTCTATACTAAGATATATATTATTACGTTCGTAGATTCCAAGAATCATAGTTTGCTGCTAGTTTTTGGCTTTTTACTAAGATTCTGTCCTTTGGATGTCCTTTTCTTGTCTTCCTTGAATTTCTATGAAGTAAATTATATAACCCGGATCATGGATGTTTTTGGTGTGAATGAAGCATTCAAATTCTTATTGAATCAAACACACACCACAACATGATTTGTTATGTAATTGAACTGCTATGGGTAGTAATTTTTCTGCTTGAAGGCATTTGAGCCCACCGGATGTTGAAGTTCGTTGACTGACAAATTTTATGATCTGTTCAGTGTGGATACATACTTTTCCGGTTCATTAATTACCATTTTAATGTTGTGTCACAGGCAAACCCTTCTAATCCAAGCACTTTTCCATTTATATTGCTTGGAAACAAAGTTGATATTGATGGCGGGAATAGTCGAGTGGTAGGCAAATGCTATTGCAGTTGTATAATTCTTCATCTCCTGCTCAAGGGTCTAATTATGTTCTATACAGGTTTCTGATAAGAAAGCAAAGGAGTGGTGTGCCTCAAAAGGGAACATTCCTTACTTTGAGACATCTGCAAAGGAAGACTTGAATGTTGATGCTGCATTCCTACGTATTGCCAAGACCGCATTAGCCAATGAACGTGAGCAAGACATGTAAGATTTTAATTGTTTTAAATTTAAATTTTGATTATTTTTGTCCAAATATGTTTAGTTCCTAGACATTTTTCTTTAGTGTCTATGAAAGGACATTATGGTGGCGTTTGATCCATGTAGCTTGTAGCCGAATCCACTTAGTGGGAGAAGGCTTGGTTGTTGTTGTAGACGAATACTGAAATGTTGAATCATTATATGCATCGCACACCAGTTAGTAGTGTTGTGTAGTAGATAGAGTATAGGACCTCCTGGCTATCTTTTTATCTGTAATGTTTTTTATTTTTTTATTTTCCCTGAATACGCATAGCTATAAATCACATGGCTTCTTTGGCTCTTTGCCTGAGTCTTCTTGCCCAAAGGAAAAGATTGTAATTATAGATAATCATTGTTTCTGCTATTTTTGTGATAGACACAAAGTACTTATGTAGTTTTGCATTATTTTTAGGTTTTAGTTTTGGGAAAATGTGATTGTGCCTCTTAACATTTAGTCTGAACTTCTGTTGTTACTAACCAATTGTTTGCATATACTATCTCTCGGCAAGAAGTGTTGTGTATCAAATTGTAACTTGTAACAAAGCTGCCAGTTAACATAGGGGACTCCCGCTTGGGACAGTAGTATTTAACATAGGGTGCTGCCAGTTATGGCTTTATGTAGCTGCCCATTTCTCACTACTTGTGAAAAAGTTGATTGGTGAAGCTGGTAGTTAACATAGGGGACTCCCACTTGGGACAGTAGGAAGAAGCACTTCAGCGTGAATGGCTCAGCTTCCACAGTTTGATTTTAAACTTTTCCTCATTAAATCTTATAAATTTGATCGGATGGTTTGATCTAATTCAATGATGTTGAATTTATTCATGTATGTTCTCGATTTTCTTCCTTCTTTTCGGGCCTATAATAGTAGTCTCGTTGACTTTTCGTTAGTAACCAACTCCAAATATCCCCCATCAGTTAGGTTAGTTGGTCAGACATAGTTAGAAAAAATAAGTCATGTCACTGAAAAATAAGAGAAGGGTTTTAGAATGAAAGGGAGAGGTGCCTAAGAATTTAAGATGAAACAGGGGTCTTATGGCATGGTGCAAACGCTCAGAAATCAAGGTCGTTGATTGCCGTGTTTTGTGCTGCGATTGAGCCGTTACGAGATTGAGGCACAGAGCAGTTACTGGACCATGATGAGGCAAGGACATCATGCATGAATGTGCAGGCGTTCAGTGAATAGCAAAATAATAATATAAACTAATAGTAAAATAATTACTTGTATGTATGTAGTATAAAATTATGTAGATATATAGTAAAATTATTTAGAATTAGACATAAATTATTTATTGACAGAGAGGCCATCCTGCTACATGTTATCCCGGCTGTTGTCCGGCTTGACTGGGATTGACAACTATGTTGAATATTTGTTGTGTTTCATTCCATAATTAGGGTAGAGATTCACTTTATTATTTCTAATAAAATACCATGTTATACTGTCACCTTTCTTTGTATCAGATATGAGATTTTAACAGATGCTTGCTTAACTGACTTCTGAATTCAATATTTCATTATGCCTTGCAGATATTTTCAACCTATTCCGGAGCCTGTTGTTCCAGAGAATGAGCAGAGGGGTGGTTGTGCATGTTGA
Protein sequence

>MS.gene03411.t1

MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFILLGNKVDIDGGNSRVVSDKKAKEWCASKGNIPYFETSAKEDLNVDAAFLRIAKTALANEREQDIYFQPIPEPVVPENEQRGGCAC