AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85812

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85812.t1 MTR_1g097420 88.942 208 20 2 1 206 1 207 3.37e-137 382
MS.gene85812.t1 MTR_1g097420 78.723 235 20 3 1 206 1 234 3.54e-131 368
MS.gene85812.t1 MTR_8g092020 76.847 203 46 1 4 206 8 209 1.40e-117 333
MS.gene85812.t1 MTR_4g012940 74.396 207 52 1 1 206 1 207 1.81e-113 322
MS.gene85812.t1 MTR_6g039490 77.184 206 46 1 1 206 1 205 6.18e-113 322
MS.gene85812.t1 MTR_2g101890 74.510 204 51 1 4 206 6 209 1.52e-112 320
MS.gene85812.t1 MTR_4g069850 73.913 207 52 2 1 206 1 206 6.55e-111 316
MS.gene85812.t1 MTR_1452s0010 88.421 95 11 0 28 122 1 95 3.11e-58 179
MS.gene85812.t1 MTR_1663s0010 94.667 75 4 0 110 184 1 75 1.70e-46 148
MS.gene85812.t1 MTR_1686s0010 72.289 83 23 0 28 110 1 83 7.14e-42 137
MS.gene85812.t1 MTR_2g096550 42.515 167 91 3 8 174 15 176 2.01e-39 134
MS.gene85812.t1 MTR_4g079350 41.975 162 87 3 8 169 13 167 3.20e-39 134
MS.gene85812.t1 MTR_4g088090 40.741 162 89 3 8 169 13 167 1.34e-38 132
MS.gene85812.t1 MTR_2g005510 39.773 176 92 4 1 169 1 169 3.13e-38 132
MS.gene85812.t1 MTR_1g052475 43.030 165 87 3 8 172 15 172 4.49e-38 131
MS.gene85812.t1 MTR_8g103550 40.000 175 97 4 1 174 1 168 1.05e-37 129
MS.gene85812.t1 MTR_7g405790 41.975 162 87 3 8 169 15 169 1.17e-37 130
MS.gene85812.t1 MTR_1g068730 39.011 182 105 3 8 189 15 190 1.46e-37 130
MS.gene85812.t1 MTR_2g014990 40.123 162 90 3 8 169 13 167 1.64e-37 130
MS.gene85812.t1 MTR_2g090865 41.104 163 89 3 8 170 11 166 2.69e-37 129
MS.gene85812.t1 MTR_1g068740 38.462 182 106 3 8 189 15 190 6.12e-37 128
MS.gene85812.t1 MTR_2g005500 35.714 196 114 4 8 203 9 192 1.08e-36 127
MS.gene85812.t1 MTR_6g021790 40.116 172 96 3 8 179 6 170 1.15e-36 127
MS.gene85812.t1 MTR_8g036220 40.000 165 92 3 8 172 16 173 1.51e-36 127
MS.gene85812.t1 MTR_7g100020 40.719 167 93 3 8 174 15 175 1.78e-36 127
MS.gene85812.t1 MTR_8g089985 40.000 165 92 3 8 172 17 174 1.98e-36 127
MS.gene85812.t1 MTR_2g075950 40.123 162 90 3 8 169 13 167 2.41e-36 127
MS.gene85812.t1 MTR_3g069510 38.788 165 94 3 8 172 12 169 2.54e-36 127
MS.gene85812.t1 MTR_1g115325 40.120 167 94 3 8 174 15 175 2.78e-36 126
MS.gene85812.t1 MTR_0262s0050 42.424 165 88 3 8 172 15 172 3.38e-36 126
MS.gene85812.t1 MTR_5g013900 35.294 204 118 4 10 206 11 207 4.62e-36 125
MS.gene85812.t1 MTR_4g064897 37.576 165 96 3 8 172 12 169 4.66e-36 126
MS.gene85812.t1 MTR_3g086980 40.000 165 92 3 8 172 16 173 5.48e-36 126
MS.gene85812.t1 MTR_8g090215 37.500 208 108 6 10 206 11 207 6.96e-36 125
MS.gene85812.t1 MTR_8g006970 39.759 166 93 3 8 173 8 166 1.08e-35 124
MS.gene85812.t1 MTR_7g051940 38.372 172 99 3 8 179 13 177 1.28e-35 125
MS.gene85812.t1 MTR_4g098950 35.468 203 118 5 10 206 11 206 1.82e-35 124
MS.gene85812.t1 MTR_8g006970 39.759 166 93 3 8 173 22 180 2.08e-35 124
MS.gene85812.t1 MTR_7g081700 36.410 195 112 4 8 202 8 190 6.36e-35 122
MS.gene85812.t1 MTR_2g027660 38.690 168 96 3 8 175 6 166 7.41e-35 122
MS.gene85812.t1 MTR_5g076590 39.394 165 93 3 10 174 12 169 8.24e-35 122
MS.gene85812.t1 MTR_8g031680 38.596 171 98 3 9 179 7 170 1.53e-34 122
MS.gene85812.t1 MTR_3g064390 39.394 165 93 3 10 174 12 169 1.71e-34 121
MS.gene85812.t1 MTR_3g087160 35.294 204 117 5 10 206 11 206 2.72e-34 121
MS.gene85812.t1 MTR_2g083860 37.654 162 94 2 8 169 13 167 1.03e-33 120
MS.gene85812.t1 MTR_8g031870 36.047 172 103 3 3 174 1 165 3.19e-33 118
MS.gene85812.t1 MTR_4g063160 39.645 169 94 4 8 174 15 177 5.56e-33 118
MS.gene85812.t1 MTR_1g078200 37.126 167 98 3 8 174 14 173 1.49e-32 117
MS.gene85812.t1 MTR_8g107070 36.022 186 110 4 8 191 14 192 3.27e-32 117
MS.gene85812.t1 MTR_6g079550 38.650 163 93 3 8 170 12 167 3.67e-32 116
MS.gene85812.t1 MTR_8g027220 38.650 163 93 3 8 170 26 181 4.90e-32 116
MS.gene85812.t1 MTR_1812s0010 67.568 74 24 0 110 183 1 74 3.01e-31 109
MS.gene85812.t1 MTR_8g031660 35.393 178 108 3 8 185 6 176 5.41e-31 112
MS.gene85812.t1 MTR_7g117910 34.328 201 122 4 8 206 20 212 2.59e-30 111
MS.gene85812.t1 MTR_8g031830 35.976 164 98 3 3 166 1 157 6.31e-29 107
MS.gene85812.t1 MTR_1g068730 41.463 123 68 1 8 130 15 133 9.68e-29 105
MS.gene85812.t1 MTR_1g068740 41.463 123 68 1 8 130 15 133 1.18e-28 106
MS.gene85812.t1 MTR_3g064390 41.322 121 67 1 10 130 12 128 3.32e-28 104
MS.gene85812.t1 MTR_1g094220 35.928 167 99 4 9 174 32 191 3.39e-28 105
MS.gene85812.t1 MTR_2g102060 34.021 194 114 5 10 203 12 191 7.42e-28 104
MS.gene85812.t1 MTR_4g099470 35.260 173 102 4 37 206 13 178 2.03e-27 102
MS.gene85812.t1 MTR_7g103070 33.831 201 121 6 10 204 18 212 6.42e-27 102
MS.gene85812.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 9.31e-27 101
MS.gene85812.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 1.16e-26 101
MS.gene85812.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 1.99e-26 101
MS.gene85812.t1 MTR_8g093740 38.037 163 93 6 8 169 13 168 3.67e-26 100
MS.gene85812.t1 MTR_1g062760 34.951 206 113 8 9 204 15 209 6.21e-26 99.8
MS.gene85812.t1 MTR_1g029450 38.037 163 93 6 8 169 17 172 1.04e-25 99.4
MS.gene85812.t1 MTR_1g090717 36.318 201 117 8 9 204 16 210 2.42e-25 98.2
MS.gene85812.t1 MTR_3g096350 37.805 164 92 6 8 169 12 167 7.40e-25 97.1
MS.gene85812.t1 MTR_3g107717 27.513 189 124 4 9 197 14 189 1.45e-23 94.0
MS.gene85812.t1 MTR_3g107707 27.513 189 124 4 9 197 14 189 1.56e-23 94.0
MS.gene85812.t1 MTR_3g107713 27.513 189 124 4 9 197 14 189 1.58e-23 94.0
MS.gene85812.t1 MTR_5g036990 62.857 70 25 1 39 107 32 101 2.31e-22 88.2
MS.gene85812.t1 MTR_3g096350 40.650 123 66 4 8 128 12 129 1.70e-21 86.7
MS.gene85812.t1 MTR_3g096350 40.650 123 66 4 8 128 12 129 2.00e-21 86.7
MS.gene85812.t1 MTR_6g087980 29.469 207 123 7 8 205 6 198 1.16e-20 85.9
MS.gene85812.t1 MTR_4g113620 26.601 203 120 7 1 197 1 180 7.18e-19 81.3
MS.gene85812.t1 MTR_8g093740 37.879 132 75 5 39 169 10 135 9.65e-19 80.1
MS.gene85812.t1 MTR_2g090875 30.168 179 110 5 8 177 6 178 2.10e-18 79.7
MS.gene85812.t1 MTR_4g088055 30.168 179 110 5 8 177 6 178 6.71e-18 78.6
MS.gene85812.t1 MTR_2g093510 58.571 70 29 0 116 185 758 827 1.01e-17 81.3
MS.gene85812.t1 MTR_5g022600 30.994 171 103 6 8 169 6 170 9.85e-17 75.5
MS.gene85812.t1 MTR_4g073250 28.649 185 117 5 8 183 6 184 1.19e-16 75.1
MS.gene85812.t1 MTR_8g075240 31.579 171 102 6 8 169 6 170 1.42e-16 74.7
MS.gene85812.t1 MTR_7g103070 32.919 161 96 6 50 204 2 156 5.61e-16 72.4
MS.gene85812.t1 MTR_3g078260 29.775 178 110 5 1 169 1 172 2.34e-15 72.0
MS.gene85812.t1 MTR_3g078260 32.031 128 80 4 1 127 1 122 8.11e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85812.t1 AT4G09720 82.039 206 37 0 1 206 1 206 8.23e-129 361
MS.gene85812.t1 AT1G22740 83.495 206 31 2 1 206 1 203 1.72e-126 355
MS.gene85812.t1 AT4G09720 80.095 211 37 1 1 206 1 211 2.52e-125 352
MS.gene85812.t1 AT4G09720 77.880 217 37 1 1 206 1 217 2.65e-125 353
MS.gene85812.t1 AT1G52280 73.301 206 55 0 1 206 1 206 5.17e-113 321
MS.gene85812.t1 AT3G16100 72.816 206 56 0 1 206 1 206 7.67e-113 321
MS.gene85812.t1 AT2G21880 72.642 212 49 3 2 206 3 212 4.29e-112 319
MS.gene85812.t1 AT3G18820 74.396 207 51 2 1 206 1 206 7.83e-111 315
MS.gene85812.t1 AT1G49300 71.014 207 58 2 1 206 1 206 3.27e-107 306
MS.gene85812.t1 AT1G49300 71.014 207 58 2 1 206 1 206 3.27e-107 306
MS.gene85812.t1 AT4G09720 79.532 171 35 0 36 206 2 172 1.16e-102 293
MS.gene85812.t1 AT4G09720 79.532 171 35 0 36 206 2 172 1.16e-102 293
MS.gene85812.t1 AT4G09720 79.532 171 35 0 36 206 2 172 1.16e-102 293
MS.gene85812.t1 AT2G21880 68.868 212 49 4 2 206 3 204 2.57e-102 294
MS.gene85812.t1 AT2G21880 70.899 189 46 3 25 206 1 187 1.01e-96 279
MS.gene85812.t1 AT2G21880 70.899 189 46 3 25 206 1 187 1.01e-96 279
MS.gene85812.t1 AT5G39620 56.931 202 86 1 6 206 3 204 3.97e-82 243
MS.gene85812.t1 AT3G12160 39.336 211 107 5 8 204 15 218 2.92e-40 137
MS.gene85812.t1 AT1G28550 41.975 162 87 3 8 169 13 167 8.16e-39 133
MS.gene85812.t1 AT3G15060 41.358 162 88 3 8 169 13 167 1.07e-38 133
MS.gene85812.t1 AT5G60860 40.741 162 89 3 8 169 13 167 1.28e-38 132
MS.gene85812.t1 AT1G09630 41.212 165 90 3 8 172 12 169 2.01e-38 132
MS.gene85812.t1 AT2G33870 40.123 162 90 3 8 169 13 167 2.64e-38 132
MS.gene85812.t1 AT5G47960 41.212 165 90 3 8 172 15 172 7.80e-38 130
MS.gene85812.t1 AT3G53610 36.683 199 117 4 8 205 15 205 1.69e-37 130
MS.gene85812.t1 AT3G53610 36.683 199 117 4 8 205 15 205 1.69e-37 130
MS.gene85812.t1 AT3G53610 36.683 199 117 4 8 205 15 205 1.69e-37 130
MS.gene85812.t1 AT5G59840 36.224 196 119 2 8 203 15 204 3.78e-37 129
MS.gene85812.t1 AT5G45750 40.123 162 90 3 8 169 13 167 4.90e-37 128
MS.gene85812.t1 AT2G44610 36.585 205 115 5 10 206 11 208 1.67e-36 127
MS.gene85812.t1 AT3G46060 35.897 195 119 3 8 202 15 203 4.04e-36 126
MS.gene85812.t1 AT3G46060 35.897 195 119 3 8 202 15 203 4.04e-36 126
MS.gene85812.t1 AT3G46060 35.897 195 119 3 8 202 15 203 4.04e-36 126
MS.gene85812.t1 AT3G11730 36.139 202 117 5 8 204 8 202 4.16e-36 125
MS.gene85812.t1 AT4G35860 37.791 172 100 3 8 179 6 170 7.93e-36 125
MS.gene85812.t1 AT2G43130 37.791 172 100 3 8 179 12 176 9.77e-36 125
MS.gene85812.t1 AT5G59150 36.970 165 97 3 8 172 12 169 1.13e-35 125
MS.gene85812.t1 AT4G17530 35.323 201 120 4 8 205 8 201 1.79e-35 124
MS.gene85812.t1 AT5G47200 35.323 201 120 4 8 205 8 201 2.22e-35 124
MS.gene85812.t1 AT1G05810 39.157 166 94 3 4 169 8 166 2.65e-35 124
MS.gene85812.t1 AT5G10260 36.058 208 111 6 10 206 11 207 2.92e-35 124
MS.gene85812.t1 AT1G07410 36.970 165 97 3 8 172 12 169 3.06e-35 124
MS.gene85812.t1 AT4G18800 38.272 162 93 3 8 169 13 167 5.12e-35 123
MS.gene85812.t1 AT5G65270 40.000 165 92 3 8 172 17 174 5.40e-35 124
MS.gene85812.t1 AT1G05810 39.157 166 94 3 4 169 54 212 5.83e-35 124
MS.gene85812.t1 AT1G16920 38.889 162 92 2 8 169 13 167 6.07e-35 123
MS.gene85812.t1 AT4G17170 38.690 168 96 3 8 175 6 166 7.93e-35 122
MS.gene85812.t1 AT2G31680 36.047 172 103 3 8 179 12 176 1.03e-34 122
MS.gene85812.t1 AT4G18430 35.152 165 100 3 8 172 13 170 1.15e-34 122
MS.gene85812.t1 AT3G09900 39.560 182 104 2 8 189 15 190 1.70e-34 122
MS.gene85812.t1 AT5G03520 39.560 182 104 3 8 189 15 190 2.38e-34 121
MS.gene85812.t1 AT4G17160 36.408 206 112 7 9 204 7 203 2.41e-34 121
MS.gene85812.t1 AT1G73640 37.576 165 96 3 8 172 13 170 2.96e-34 122
MS.gene85812.t1 AT1G18200 36.970 165 97 3 8 172 13 170 3.93e-34 121
MS.gene85812.t1 AT4G39990 38.889 162 92 3 8 169 17 171 5.56e-34 121
MS.gene85812.t1 AT4G39890 38.323 167 93 3 9 173 10 168 5.69e-34 120
MS.gene85812.t1 AT5G64990 35.885 209 111 5 10 206 9 206 5.85e-34 120
MS.gene85812.t1 AT3G46830 36.364 165 98 3 8 172 12 169 6.08e-34 120
MS.gene85812.t1 AT3G46830 36.364 165 98 3 8 172 12 169 6.08e-34 120
MS.gene85812.t1 AT1G02130 36.905 168 99 3 8 175 8 168 1.01e-33 119
MS.gene85812.t1 AT1G01200 39.877 163 92 3 8 170 28 184 3.63e-33 119
MS.gene85812.t1 AT2G22290 35.714 210 109 7 10 206 11 207 4.77e-33 118
MS.gene85812.t1 AT5G45130 39.394 165 93 3 10 174 12 169 1.11e-32 117
MS.gene85812.t1 AT1G06400 36.420 162 96 3 8 169 13 167 3.17e-32 116
MS.gene85812.t1 AT3G07410 36.047 172 103 3 8 179 12 176 4.07e-32 116
MS.gene85812.t1 AT4G19640 38.182 165 95 3 10 174 12 169 4.36e-32 115
MS.gene85812.t1 AT5G45130 39.264 163 92 3 12 174 22 177 1.67e-31 114
MS.gene85812.t1 AT5G64990 34.722 216 111 6 10 206 9 213 2.73e-31 114
MS.gene85812.t1 AT5G47520 38.323 167 96 4 8 174 14 173 2.99e-31 114
MS.gene85812.t1 AT3G54840 36.585 164 96 4 9 171 34 190 7.53e-29 107
MS.gene85812.t1 AT3G54840 36.527 167 98 4 9 174 34 193 1.31e-28 106
MS.gene85812.t1 AT3G54840 36.364 165 97 4 11 174 2 159 4.44e-28 104
MS.gene85812.t1 AT4G19640 40.833 120 67 1 10 129 12 127 1.27e-27 102
MS.gene85812.t1 AT1G43890 39.877 163 90 6 8 169 13 168 4.52e-27 102
MS.gene85812.t1 AT1G43890 39.877 163 90 6 8 169 13 168 4.52e-27 102
MS.gene85812.t1 AT1G43890 39.877 163 90 6 8 169 13 168 4.52e-27 102
MS.gene85812.t1 AT4G19640 40.833 120 67 1 10 129 12 127 7.79e-27 101
MS.gene85812.t1 AT5G03520 39.726 146 82 3 44 189 41 180 2.15e-26 100
MS.gene85812.t1 AT5G03530 38.415 164 89 6 9 169 14 168 1.30e-25 99.0
MS.gene85812.t1 AT5G03530 38.415 164 89 6 9 169 14 168 1.30e-25 99.0
MS.gene85812.t1 AT5G20010 28.042 189 123 4 9 197 14 189 1.22e-24 96.7
MS.gene85812.t1 AT5G20020 28.042 189 123 4 9 197 14 189 1.57e-24 96.7
MS.gene85812.t1 AT5G55190 27.513 189 124 4 9 197 14 189 1.80e-23 93.6
MS.gene85812.t1 AT4G35860 36.923 130 75 3 50 179 2 124 2.78e-23 91.7
MS.gene85812.t1 AT4G28950 30.732 205 122 7 8 205 6 197 4.30e-23 92.4
MS.gene85812.t1 AT5G55080 27.711 166 110 3 9 174 14 169 1.17e-22 91.7
MS.gene85812.t1 AT5G59150 34.959 123 73 3 50 172 3 118 5.19e-20 83.2
MS.gene85812.t1 AT3G09910 33.161 193 117 8 9 200 14 195 1.52e-19 82.8
MS.gene85812.t1 AT3G09910 33.161 193 117 8 9 200 14 195 1.52e-19 82.8
MS.gene85812.t1 AT3G09910 35.185 162 97 6 9 169 14 168 1.65e-19 82.8
MS.gene85812.t1 AT3G09910 35.185 162 97 6 9 169 14 168 1.65e-19 82.8
MS.gene85812.t1 AT3G09910 35.185 162 97 6 9 169 14 168 1.65e-19 82.8
MS.gene85812.t1 AT5G45970 29.213 178 113 4 8 177 6 178 1.21e-18 80.5
MS.gene85812.t1 AT2G44690 30.409 171 104 5 8 169 18 182 9.91e-18 78.2
MS.gene85812.t1 AT1G20090 30.168 179 110 5 8 177 5 177 2.76e-17 76.6
MS.gene85812.t1 AT1G75840 30.168 179 110 5 8 177 6 178 5.04e-17 76.3
MS.gene85812.t1 AT4G35020 30.168 179 110 5 8 177 6 178 8.19e-17 75.5
MS.gene85812.t1 AT4G35020 30.168 179 110 5 8 177 6 178 8.19e-17 75.5
MS.gene85812.t1 AT4G35020 30.168 179 110 5 8 177 6 178 8.19e-17 75.5
MS.gene85812.t1 AT3G51300 30.409 171 104 5 8 169 6 170 1.72e-16 74.7
MS.gene85812.t1 AT3G48040 30.337 178 109 5 1 169 1 172 5.27e-16 73.6
MS.gene85812.t1 AT5G62880 30.337 178 109 5 1 169 1 172 7.08e-16 73.6
MS.gene85812.t1 AT2G17800 29.825 171 105 5 8 169 6 170 9.02e-16 72.8
MS.gene85812.t1 AT2G17800 29.825 171 105 5 8 169 6 170 9.02e-16 72.8
MS.gene85812.t1 AT4G35950 29.825 171 105 5 8 169 6 170 1.28e-15 72.4
MS.gene85812.t1 AT5G62880 29.670 182 113 5 1 173 1 176 1.72e-15 72.0
MS.gene85812.t1 AT3G48040 28.804 184 112 7 1 174 1 175 7.22e-14 67.4
MS.gene85812.t1 AT4G35020 32.231 121 75 4 8 127 6 120 1.18e-12 63.2
MS.gene85812.t1 AT4G35020 32.231 121 75 4 8 127 6 120 1.18e-12 63.2

Find 41 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCAAAGTTATCGTTCT+TGG 0.212272 6.4:+14212520 MS.gene85812:CDS
TTGTTTCCAAGCAATATAAA+TGG 0.243659 6.4:-14216660 None:intergenic
GGAAAAGTGCTTGGATTAGA+AGG 0.279843 6.4:-14216639 None:intergenic
CATGTCTTGCTCACGTTCAT+TGG 0.341105 6.4:-14216908 None:intergenic
CATTTGATACACTTGATAAC+TGG 0.350734 6.4:+14214589 MS.gene85812:CDS
TGCTCATTCTCTGGAACAAC+AGG 0.356385 6.4:-14218471 None:intergenic
GTCATCGATCTGCAATTCTT+TGG 0.364093 6.4:-14214331 None:intergenic
TTCATTGGCTAATGCGGTCT+TGG 0.384901 6.4:-14216893 None:intergenic
CCACCCCTCTGCTCATTCTC+TGG 0.385786 6.4:-14218480 None:intergenic
GGAAACAAAGTTGATATTGA+TGG 0.397484 6.4:+14216675 MS.gene85812:CDS
GCACGAGGAGTTTCTGAAAC+AGG 0.403015 6.4:+14214611 MS.gene85812:CDS
TTTGCAGATGTCTCAAAGTA+AGG 0.412467 6.4:-14216832 None:intergenic
GGAACAACAGGCTCCGGAAT+AGG 0.412607 6.4:-14218459 None:intergenic
TTCTCTGGAACAACAGGCTC+CGG 0.445505 6.4:-14218465 None:intergenic
CAGCAATATAAAGCTACAAT+TGG 0.445543 6.4:+14214294 MS.gene85812:CDS
AAGGAGTGGTGTGCCTCAAA+AGG 0.461942 6.4:+14216802 MS.gene85812:CDS
CAGGAGAGATTTCAAAGTCT+TGG 0.477942 6.4:+14214504 MS.gene85812:CDS
GAAAAGTGCTTGGATTAGAA+GGG 0.482693 6.4:-14216638 None:intergenic
GAGTAAAGTTCTTCTGCGTA+AGG 0.495389 6.4:-14212503 None:intergenic
GATATGGGACACTGCAGGGC+AGG 0.508321 6.4:+14214485 MS.gene85812:intron
AATATAAATGGAAAAGTGCT+TGG 0.513022 6.4:-14216648 None:intergenic
CTCACGTTCATTGGCTAATG+CGG 0.541940 6.4:-14216899 None:intergenic
TTGTAGATATGGGACACTGC+AGG 0.562646 6.4:+14214480 MS.gene85812:intron
ACAAAGTTGATATTGATGGC+GGG 0.570371 6.4:+14216679 MS.gene85812:CDS
GTAAACGAGAACACAGCAAT+CGG 0.572135 6.4:-14214547 None:intergenic
AGGAGTGGTGTGCCTCAAAA+GGG 0.578968 6.4:+14216803 MS.gene85812:CDS
GTTATCGTTCTTGGAGACAG+TGG 0.595335 6.4:+14212529 MS.gene85812:CDS
TTACTTTGAGACATCTGCAA+AGG 0.600040 6.4:+14216834 MS.gene85812:CDS
ATGCGGTCTTGGCAATACAT+AGG 0.600941 6.4:-14216882 None:intergenic
TTATCGTTCTTGGAGACAGT+GGG 0.601568 6.4:+14212530 MS.gene85812:CDS
AACAAAGTTGATATTGATGG+CGG 0.603275 6.4:+14216678 MS.gene85812:CDS
TGTAGATATGGGACACTGCA+GGG 0.605102 6.4:+14214481 MS.gene85812:intron
TGTTCCAGAGAATGAGCAGA+GGG 0.618287 6.4:+14218476 MS.gene85812:CDS
CTGATAAGAAAGCAAAGGAG+TGG 0.631616 6.4:+14216788 MS.gene85812:CDS
CCAGAGAATGAGCAGAGGGG+TGG 0.645887 6.4:+14218480 MS.gene85812:CDS
GGTTTCTGATAAGAAAGCAA+AGG 0.657913 6.4:+14216783 MS.gene85812:intron
CCACTTGTAGAGTAACTAGT+CGG 0.695643 6.4:-14214353 None:intergenic
TTGTTCCAGAGAATGAGCAG+AGG 0.709082 6.4:+14218475 MS.gene85812:CDS
TGATGGCGGGAATAGTCGAG+TGG 0.710562 6.4:+14216692 MS.gene85812:CDS
TACACTTGATAACTGGCACG+AGG 0.736931 6.4:+14214596 MS.gene85812:CDS
GTTCCAGAGAATGAGCAGAG+GGG 0.763638 6.4:+14218477 MS.gene85812:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAATTTATAAGATTTAA+TGG - chr6.4:14217726-14217745 None:intergenic 10.0%
!! TCAAATTTATAAGATTTAAT+GGG - chr6.4:14217725-14217744 None:intergenic 10.0%
!!! ATTGAAATTTTAAATAATAG+AGG + chr6.4:14213932-14213951 MS.gene85812:intron 10.0%
!!! CTATTTTATTTTTCAAATAT+CGG + chr6.4:14214220-14214239 MS.gene85812:intron 10.0%
!!! TCTATTATTTAAAATTTCAA+TGG - chr6.4:14213933-14213952 None:intergenic 10.0%
!!! TTGAAATTTTAAATAATAGA+GGG + chr6.4:14213933-14213952 MS.gene85812:intron 10.0%
!! AAATGAAGTTATAGTATTAA+TGG - chr6.4:14215615-14215634 None:intergenic 15.0%
!! AATGAAGTTATAGTATTAAT+GGG - chr6.4:14215614-14215633 None:intergenic 15.0%
!! ATTAAAGATAAGAAAATGAT+AGG + chr6.4:14215995-14216014 MS.gene85812:intron 15.0%
!! CAAATTTATAAGATTTAATG+GGG - chr6.4:14217724-14217743 None:intergenic 15.0%
!! TTAAAGATAAGAAAATGATA+GGG + chr6.4:14215996-14216015 MS.gene85812:intron 15.0%
!!! ATTTTATAATTTGTTTAGTG+TGG + chr6.4:14216561-14216580 MS.gene85812:intron 15.0%
!!! ATTTTGTTTTCATTTTTGTT+AGG + chr6.4:14212621-14212640 MS.gene85812:intron 15.0%
!!! TATTTTTAGGTTTTAGTTTT+GGG + chr6.4:14217366-14217385 MS.gene85812:intron 15.0%
!!! TTATTTTTAGGTTTTAGTTT+TGG + chr6.4:14217365-14217384 MS.gene85812:intron 15.0%
!!! TTTTGTTTTCATTTTTGTTA+GGG + chr6.4:14212622-14212641 MS.gene85812:intron 15.0%
!! AATACTATAACTTCATTTCA+TGG + chr6.4:14215617-14215636 MS.gene85812:intron 20.0%
!! ATATCTATACAAGTAGTTAA+TGG - chr6.4:14214256-14214275 None:intergenic 20.0%
!! ATCTTATAAATTTGATCGTA+TGG + chr6.4:14217730-14217749 MS.gene85812:intron 20.0%
!! ATTCTTTGGTGAAATAATAA+TGG - chr6.4:14215488-14215507 None:intergenic 20.0%
!! TAAAATGGTAATTAATGAAC+CGG - chr6.4:14216599-14216618 None:intergenic 20.0%
!! TGACAAAATTAGAAAAATAG+AGG - chr6.4:14214649-14214668 None:intergenic 20.0%
!! TGTATAGCCTATAATTTATT+TGG - chr6.4:14214714-14214733 None:intergenic 20.0%
!! TTCTTTGGTGAAATAATAAT+GGG - chr6.4:14215487-14215506 None:intergenic 20.0%
!!! AAAAGTTTAAAATCAAACTG+TGG - chr6.4:14217701-14217720 None:intergenic 20.0%
!!! ACAGTTTTAAATAAAGATCT+GGG - chr6.4:14213878-14213897 None:intergenic 20.0%
!!! ATTTGATTTAGATCGATTTA+AGG + chr6.4:14214186-14214205 MS.gene85812:intron 20.0%
!!! GGGAATTTTCATATATTTAT+TGG + chr6.4:14216016-14216035 MS.gene85812:intron 20.0%
!!! TAATTACAATCTTTTCCTTT+GGG - chr6.4:14217285-14217304 None:intergenic 20.0%
!!! TACAGTTTTAAATAAAGATC+TGG - chr6.4:14213879-14213898 None:intergenic 20.0%
!!! TGTAGTTTTGCATTATTTTT+AGG + chr6.4:14217353-14217372 MS.gene85812:intron 20.0%
!!! TTATCGCAATTTTCAATATT+GGG + chr6.4:14213167-14213186 MS.gene85812:intron 20.0%
!!! TTTATCGCAATTTTCAATAT+TGG + chr6.4:14212970-14212989 MS.gene85812:intron 20.0%
!!! TTTTCTTTATTGTCTATGAT+AGG + chr6.4:14216999-14217018 MS.gene85812:intron 20.0%
! AAAACTGAAAATGAAGTTTG+TGG - chr6.4:14212568-14212587 None:intergenic 25.0%
! AACAGTAACACTTATTTAGA+GGG - chr6.4:14215318-14215337 None:intergenic 25.0%
! AATGAATATTGGAAATTGGT+AGG + chr6.4:14213994-14214013 MS.gene85812:intron 25.0%
! AATGGTTATGAATGAATCAA+CGG + chr6.4:14215145-14215164 MS.gene85812:intron 25.0%
! ACCAAATCATAAAATTGCAA+AGG - chr6.4:14212677-14212696 None:intergenic 25.0%
! AGATAGTTTATGCAAACAAT+TGG - chr6.4:14217443-14217462 None:intergenic 25.0%
! ATTTACTTCGTAGAAATTCA+AGG - chr6.4:14216372-14216391 None:intergenic 25.0%
! CTTTGATATTGATGAGAATT+GGG + chr6.4:14213318-14213337 MS.gene85812:intron 25.0%
! GACAATAAAGAAAAATGTCT+AGG - chr6.4:14216993-14217012 None:intergenic 25.0%
! GAGATTCGAATTAATAATTG+TGG + chr6.4:14213010-14213029 MS.gene85812:intron 25.0%
! GCTTAATGAATATTGGAAAT+TGG + chr6.4:14213990-14214009 MS.gene85812:intron 25.0%
! GTTGAGTCCAAATAAATTAT+AGG + chr6.4:14214704-14214723 MS.gene85812:intron 25.0%
! TAACAGTAACACTTATTTAG+AGG - chr6.4:14215319-14215338 None:intergenic 25.0%
! TAATTTCAGAGAAAATCGTA+AGG - chr6.4:14214030-14214049 None:intergenic 25.0%
! TAGTGAAATTATTGAAAGAG+AGG + chr6.4:14218203-14218222 MS.gene85812:intron 25.0%
! TATAGGCACATTAATAATGT+GGG - chr6.4:14215370-14215389 None:intergenic 25.0%
! TCTTTGATATTGATGAGAAT+TGG + chr6.4:14213317-14213336 MS.gene85812:intron 25.0%
! TGTGTTTCATTCCATAATTA+GGG + chr6.4:14218296-14218315 MS.gene85812:intron 25.0%
! TTACATAACAAATCATACTG+TGG - chr6.4:14216463-14216482 None:intergenic 25.0%
! TTAGCATGCTTAATGAATAT+TGG + chr6.4:14213983-14214002 MS.gene85812:intron 25.0%
! TTATAGGCACATTAATAATG+TGG - chr6.4:14215371-14215390 None:intergenic 25.0%
! TTATGTAATTGAACTGCTAT+GGG + chr6.4:14216475-14216494 MS.gene85812:intron 25.0%
! TTGTGTTTCATTCCATAATT+AGG + chr6.4:14218295-14218314 MS.gene85812:intron 25.0%
! TTGTTTCCAAGCAATATAAA+TGG - chr6.4:14216663-14216682 None:intergenic 25.0%
! TTTAGTCATCATTAACATTG+AGG - chr6.4:14215422-14215441 None:intergenic 25.0%
! TTTGATATTGATGAGAATTG+GGG + chr6.4:14213319-14213338 MS.gene85812:intron 25.0%
!! ACATACAGAGTTTTACATAA+AGG - chr6.4:14213548-14213567 None:intergenic 25.0%
!! ACTTGCTAAATAACAACAAA+AGG - chr6.4:14216327-14216346 None:intergenic 25.0%
!! ACTTTTCCATTTATATTGCT+TGG + chr6.4:14216654-14216673 MS.gene85812:CDS 25.0%
!! ATGATGGAAAAAAGATACAA+TGG - chr6.4:14215785-14215804 None:intergenic 25.0%
!! GTAATTACAATCTTTTCCTT+TGG - chr6.4:14217286-14217305 None:intergenic 25.0%
!! TCCTTTGCAATTTTATGATT+TGG + chr6.4:14212673-14212692 MS.gene85812:intron 25.0%
!! TTTTCTAATTTTGTCACTCT+CGG + chr6.4:14214653-14214672 MS.gene85812:intron 25.0%
!!! AAAACCCTACTCTTATTTTT+CGG - chr6.4:14217919-14217938 None:intergenic 25.0%
!!! AATATAAATGGAAAAGTGCT+TGG - chr6.4:14216651-14216670 None:intergenic 25.0%
!!! ATCTTTTTTCCATCATTCAT+TGG + chr6.4:14215789-14215808 MS.gene85812:intron 25.0%
!!! ATTTTCAATATTGGGTTGAA+TGG + chr6.4:14213175-14213194 MS.gene85812:intron 25.0%
!!! CTTTGAAATAATGATGACAA+TGG + chr6.4:14214799-14214818 MS.gene85812:intron 25.0%
!!! TAATCATATCGTGGTTTTAT+CGG + chr6.4:14212907-14212926 MS.gene85812:intron 25.0%
!!! TACGATTTTCTCTGAAATTA+TGG + chr6.4:14214030-14214049 MS.gene85812:intron 25.0%
!!! TATCGGTATTTTGAATATCT+CGG + chr6.4:14212924-14212943 MS.gene85812:intron 25.0%
!!! TATTTAGTTCTTACTTGTCT+TGG + chr6.4:14215074-14215093 MS.gene85812:intron 25.0%
AAATTATATAACCCGCATCA+TGG + chr6.4:14216388-14216407 MS.gene85812:intron 30.0%
AAGTAAGAACTAAATACTGG+AGG - chr6.4:14215070-14215089 None:intergenic 30.0%
AATAGAGGGCAAATACTATT+TGG + chr6.4:14213947-14213966 MS.gene85812:intron 30.0%
ACAGTAACACTTATTTAGAG+GGG - chr6.4:14215317-14215336 None:intergenic 30.0%
ACAGTAGTATTTAACATAGG+GGG + chr6.4:14217539-14217558 MS.gene85812:intron 30.0%
ACAGTATGTAATGTGTTACA+AGG - chr6.4:14216198-14216217 None:intergenic 30.0%
AGCTCTCAAGTGAAAATTAA+TGG + chr6.4:14215928-14215947 MS.gene85812:intron 30.0%
AGTTCAGACTAAATGTTAAG+AGG - chr6.4:14217406-14217425 None:intergenic 30.0%
ATACAATGGTGAAATCTGAT+GGG - chr6.4:14215771-14215790 None:intergenic 30.0%
ATAGGCACATTAATAATGTG+GGG - chr6.4:14215369-14215388 None:intergenic 30.0%
ATAGTGGTGTTTATGTCAAT+TGG + chr6.4:14212779-14212798 MS.gene85812:intron 30.0%
ATGTGTTTGTGTTGTAGATA+TGG + chr6.4:14214469-14214488 MS.gene85812:intron 30.0%
ATTACCGCAATTCAAAATCT+CGG - chr6.4:14212891-14212910 None:intergenic 30.0%
ATTTATAGCTATGCGTATTC+AGG - chr6.4:14217225-14217244 None:intergenic 30.0%
CAATTGTCTCAACAAACTAT+TGG - chr6.4:14214994-14215013 None:intergenic 30.0%
CAGCAATATAAAGCTACAAT+TGG + chr6.4:14214294-14214313 MS.gene85812:CDS 30.0%
CCAGAATTCTATATAAACCA+AGG + chr6.4:14215888-14215907 MS.gene85812:intron 30.0%
CCTTGGTTTATATAGAATTC+TGG - chr6.4:14215891-14215910 None:intergenic 30.0%
CTCATATCTGATACAAAGAA+AGG - chr6.4:14218370-14218389 None:intergenic 30.0%
GAAAATGAAGTTTGTGGATT+AGG - chr6.4:14212562-14212581 None:intergenic 30.0%
GAATAACCTAACAAACGAAA+TGG + chr6.4:14215197-14215216 MS.gene85812:intron 30.0%
GACAAGTAAGAACTAAATAC+TGG - chr6.4:14215073-14215092 None:intergenic 30.0%
GACAATTGTAGTTTAATGCA+TGG + chr6.4:14213781-14213800 MS.gene85812:intron 30.0%
GACAGTAGTATTTAACATAG+GGG + chr6.4:14217538-14217557 MS.gene85812:intron 30.0%
GGACAGTAGTATTTAACATA+GGG + chr6.4:14217537-14217556 MS.gene85812:intron 30.0%
GGTCTAATTATGTTCTATAC+AGG + chr6.4:14216762-14216781 MS.gene85812:intron 30.0%
GTCTAGGAACTAAACATATT+TGG - chr6.4:14216977-14216996 None:intergenic 30.0%
GTTAGGTTATTCATCCAATT+TGG - chr6.4:14215189-14215208 None:intergenic 30.0%
GTTAGTATCAATCTAAGTGA+AGG - chr6.4:14216094-14216113 None:intergenic 30.0%
GTTATGTAATTGAACTGCTA+TGG + chr6.4:14216474-14216493 MS.gene85812:intron 30.0%
GTTTAATGCATGGAGTTTAA+TGG + chr6.4:14213791-14213810 MS.gene85812:intron 30.0%
TAACACATTACATACTGTCA+AGG + chr6.4:14216200-14216219 MS.gene85812:intron 30.0%
TAAGACAGAGTTTCAAACAA+CGG - chr6.4:14213418-14213437 None:intergenic 30.0%
TAGTGGTGTTTATGTCAATT+GGG + chr6.4:14212780-14212799 MS.gene85812:intron 30.0%
TATAAATCACATGGCTTCTT+TGG + chr6.4:14217238-14217257 MS.gene85812:intron 30.0%
TCATTCATAACCATTGTAAG+AGG - chr6.4:14215140-14215159 None:intergenic 30.0%
TGTGTTTGTGTTGTAGATAT+GGG + chr6.4:14214470-14214489 MS.gene85812:intron 30.0%
TGTTTGCATAAACTATCTCT+CGG + chr6.4:14217445-14217464 MS.gene85812:intron 30.0%
TTACAGATAAAAAGATAGCC+AGG - chr6.4:14217180-14217199 None:intergenic 30.0%
TTACTCAAAGTTATCGTTCT+TGG + chr6.4:14212520-14212539 MS.gene85812:CDS 30.0%
TTCTACATTTCCTCTTACAA+TGG + chr6.4:14215127-14215146 MS.gene85812:intron 30.0%
TTGTCTATGATAGGACATTA+TGG + chr6.4:14217008-14217027 MS.gene85812:intron 30.0%
TTGTGTAGTAGATAGAGTAT+AGG + chr6.4:14217150-14217169 MS.gene85812:intron 30.0%
TTTATAGCTATGCGTATTCA+GGG - chr6.4:14217224-14217243 None:intergenic 30.0%
TTTCAAATATCGGCATATGT+GGG + chr6.4:14214230-14214249 MS.gene85812:intron 30.0%
TTTCTAAACAACTGCAATTG+AGG - chr6.4:14213646-14213665 None:intergenic 30.0%
! AAAGAATGCCTTTTGCTTAT+GGG + chr6.4:14215501-14215520 MS.gene85812:intron 30.0%
! AAATTTACGAGGATTTTCAC+AGG - chr6.4:14215954-14215973 None:intergenic 30.0%
! ATAGGTTGAAAATATCTGCA+AGG - chr6.4:14218444-14218463 None:intergenic 30.0%
! CAGATATTTTCAACCTATTC+CGG + chr6.4:14218446-14218465 MS.gene85812:intron 30.0%
! CATTTGATACACTTGATAAC+TGG + chr6.4:14214589-14214608 MS.gene85812:CDS 30.0%
! GATCGATTTAAGGTTATTCA+AGG + chr6.4:14214196-14214215 MS.gene85812:intron 30.0%
! GCAATTTTCAATATCGTGTA+GGG + chr6.4:14212976-14212995 MS.gene85812:intron 30.0%
! GTGATTACGGATTTTAAACT+TGG + chr6.4:14214855-14214874 MS.gene85812:intron 30.0%
! TATCGTGATTTTCAATATCG+CGG + chr6.4:14213120-14213139 MS.gene85812:intron 30.0%
! TCGATTTTCTTCCATCTTTT+GGG + chr6.4:14217795-14217814 MS.gene85812:intron 30.0%
! TGCTTCATTTGCATGATTTT+GGG + chr6.4:14212754-14212773 MS.gene85812:intron 30.0%
! TGTTTTCCATTTCGTTTGTT+AGG - chr6.4:14215206-14215225 None:intergenic 30.0%
! TTGCTTCATTTGCATGATTT+TGG + chr6.4:14212753-14212772 MS.gene85812:intron 30.0%
! TTTTCAAATATCGGCATATG+TGG + chr6.4:14214229-14214248 MS.gene85812:intron 30.0%
!! AACAAAGTTGATATTGATGG+CGG + chr6.4:14216678-14216697 MS.gene85812:CDS 30.0%
!! GGAAACAAAGTTGATATTGA+TGG + chr6.4:14216675-14216694 MS.gene85812:CDS 30.0%
!! GTTTTCATTTTTGTTAGGGT+TGG + chr6.4:14212626-14212645 MS.gene85812:intron 30.0%
!! TTGTTGTTATTTAGCAAGTC+TGG + chr6.4:14216328-14216347 MS.gene85812:intron 30.0%
!! TTTTTCTCTAGCATTGAATG+TGG + chr6.4:14214084-14214103 MS.gene85812:intron 30.0%
!!! TTGGTGTTGCATTTTATAGA+GGG + chr6.4:14214523-14214542 MS.gene85812:CDS 30.0%
AAATTTGACCTAGAGCTCTA+TGG + chr6.4:14215968-14215987 MS.gene85812:intron 35.0%
AACAGTGAAGGAAACCAAAT+TGG + chr6.4:14215172-14215191 MS.gene85812:intron 35.0%
AACGAAAAGTCAATGAGACT+AGG - chr6.4:14217822-14217841 None:intergenic 35.0%
AAGAAGCTGGATCATTGTAA+TGG + chr6.4:14213575-14213594 MS.gene85812:intron 35.0%
AAGGATTTAAGAGGGTCTTA+TGG + chr6.4:14217961-14217980 MS.gene85812:intron 35.0%
AATTATTCATCTCCTGCTCA+AGG + chr6.4:14216740-14216759 MS.gene85812:intron 35.0%
AATTCAAGGAAGACGAGAAA+AGG - chr6.4:14216358-14216377 None:intergenic 35.0%
ACAGCTAATCTGAACTATCA+AGG - chr6.4:14216055-14216074 None:intergenic 35.0%
ACCAAAAATATCCATGATGC+GGG - chr6.4:14216402-14216421 None:intergenic 35.0%
ACCAACTAACCTAACTGAAA+GGG - chr6.4:14217865-14217884 None:intergenic 35.0%
ACGCATAGCTATAAATCACA+TGG + chr6.4:14217229-14217248 MS.gene85812:intron 35.0%
AGAAAGGTGACAGTATAACA+TGG - chr6.4:14218354-14218373 None:intergenic 35.0%
AGTAACACTTATTTAGAGGG+GGG - chr6.4:14215315-14215334 None:intergenic 35.0%
AGTATCAATCTAAGTGAAGC+AGG - chr6.4:14216116-14216135 None:intergenic 35.0%
ATTATTCATCTCCTGCTCAA+GGG + chr6.4:14216741-14216760 MS.gene85812:intron 35.0%
ATTTCAAAGCAGCTGAATTG+CGG + chr6.4:14213728-14213747 MS.gene85812:intron 35.0%
CAAAAACTAGCAGCAAACTA+AGG - chr6.4:14216284-14216303 None:intergenic 35.0%
CACCAAAAATATCCATGATG+CGG - chr6.4:14216403-14216422 None:intergenic 35.0%
CAGTAACACTTATTTAGAGG+GGG - chr6.4:14215316-14215335 None:intergenic 35.0%
CATCATTAACATTGAGGACA+AGG - chr6.4:14215416-14215435 None:intergenic 35.0%
CCTGTGACACAACATTAAAA+TGG - chr6.4:14216614-14216633 None:intergenic 35.0%
CTAAATCCAATAAGCTAGCA+TGG + chr6.4:14215437-14215456 MS.gene85812:intron 35.0%
GACAAACCATTACCACAATT+CGG - chr6.4:14213452-14213471 None:intergenic 35.0%
GAGAGTGGAATTTATGATTG+TGG + chr6.4:14212814-14212833 MS.gene85812:intron 35.0%
GATACAATGGTGAAATCTGA+TGG - chr6.4:14215772-14215791 None:intergenic 35.0%
GGGACAGTAGTATTTAACAT+AGG + chr6.4:14217536-14217555 MS.gene85812:intron 35.0%
GTCACCGAAAAATAAGAGTA+GGG + chr6.4:14217912-14217931 MS.gene85812:intron 35.0%
GTGAATCTCTACCCTAATTA+TGG - chr6.4:14218310-14218329 None:intergenic 35.0%
GTTGCTATAAAGCAAAACCA+TGG - chr6.4:14214967-14214986 None:intergenic 35.0%
TAAGACCCTCTTAAATCCTT+AGG - chr6.4:14217961-14217980 None:intergenic 35.0%
TAATATAGCCATAGAGCTCT+AGG - chr6.4:14215979-14215998 None:intergenic 35.0%
TAATGCATGGAGTTTAATGG+CGG + chr6.4:14213794-14213813 MS.gene85812:intron 35.0%
TACTACACAACACTACTAAC+TGG - chr6.4:14217140-14217159 None:intergenic 35.0%
TAGGCACATTAATAATGTGG+GGG - chr6.4:14215368-14215387 None:intergenic 35.0%
TATGTCATAACTCATGACCA+TGG + chr6.4:14214947-14214966 MS.gene85812:intron 35.0%
TCATGCAGAGAATGGAAAAA+GGG - chr6.4:14215831-14215850 None:intergenic 35.0%
TCTATGATAGGACATTATGG+TGG + chr6.4:14217011-14217030 MS.gene85812:intron 35.0%
TGAAGCTGGTAGTTAACATA+GGG + chr6.4:14217622-14217641 MS.gene85812:intron 35.0%
TGTCACAGTCATCGATAATA+TGG + chr6.4:14213468-14213487 MS.gene85812:intron 35.0%
TGTCACCGAAAAATAAGAGT+AGG + chr6.4:14217911-14217930 MS.gene85812:intron 35.0%
TTAAATACTACTGTCCCAAG+CGG - chr6.4:14217533-14217552 None:intergenic 35.0%
TTTCACGAGTAGTGAGAAAT+GGG - chr6.4:14217591-14217610 None:intergenic 35.0%
TTTCTGGGTTCTATAGAGTA+AGG - chr6.4:14215256-14215275 None:intergenic 35.0%
TTTGCAGATGTCTCAAAGTA+AGG - chr6.4:14216835-14216854 None:intergenic 35.0%
! AAAAAGTTGATTGGTGAAGC+TGG + chr6.4:14217608-14217627 MS.gene85812:intron 35.0%
! ACAGTCTAAGATGCAACAAT+AGG - chr6.4:14213852-14213871 None:intergenic 35.0%
! AGACCAAGTTTTCTCATTGT+TGG + chr6.4:14215704-14215723 MS.gene85812:intron 35.0%
! AGGATTTAAGAGGGTCTTAT+GGG + chr6.4:14217962-14217981 MS.gene85812:intron 35.0%
! AGTGTGGATGCATAATTTTC+CGG + chr6.4:14216577-14216596 MS.gene85812:intron 35.0%
! ATCGTGTAGGGATGTATTTT+TGG + chr6.4:14212988-14213007 MS.gene85812:intron 35.0%
! CAAAGAATGCCTTTTGCTTA+TGG + chr6.4:14215500-14215519 MS.gene85812:intron 35.0%
! CAGTCTAAGATGCAACAATA+GGG - chr6.4:14213851-14213870 None:intergenic 35.0%
! CGATTTTCTTCCATCTTTTG+GGG + chr6.4:14217796-14217815 MS.gene85812:intron 35.0%
! CGCAATTTTCAATATCGTGT+AGG + chr6.4:14212975-14212994 MS.gene85812:intron 35.0%
! CTACTCGTGAAAAAGTTGAT+TGG + chr6.4:14217599-14217618 MS.gene85812:intron 35.0%
! CTCGATTTTCTTCCATCTTT+TGG + chr6.4:14217794-14217813 MS.gene85812:intron 35.0%
! GTAGAGGATTAGTGTGATTA+CGG + chr6.4:14214842-14214861 MS.gene85812:intron 35.0%
! TTTTCACGAGTAGTGAGAAA+TGG - chr6.4:14217592-14217611 None:intergenic 35.0%
!! AACTCTGTCTTATTTCAGAG+TGG + chr6.4:14213426-14213445 MS.gene85812:intron 35.0%
!! ACAAAGTTGATATTGATGGC+GGG + chr6.4:14216679-14216698 MS.gene85812:CDS 35.0%
!! CATAAGCAAAAGGCATTCTT+TGG - chr6.4:14215502-14215521 None:intergenic 35.0%
!! CCATTTTAATGTTGTGTCAC+AGG + chr6.4:14216611-14216630 MS.gene85812:intron 35.0%
!! GAAAAGTGCTTGGATTAGAA+GGG - chr6.4:14216641-14216660 None:intergenic 35.0%
!! TTACTTTGAGACATCTGCAA+AGG + chr6.4:14216834-14216853 MS.gene85812:CDS 35.0%
!! TTCAATATTGGGTTGAATGG+TGG + chr6.4:14213178-14213197 MS.gene85812:intron 35.0%
!! TTGTTGGGGGAAGTATTTAT+AGG - chr6.4:14215387-14215406 None:intergenic 35.0%
!!! CTTAGTTTGCTGCTAGTTTT+TGG + chr6.4:14216282-14216301 MS.gene85812:intron 35.0%
!!! CTTGGTGTTGCATTTTATAG+AGG + chr6.4:14214522-14214541 MS.gene85812:CDS 35.0%
!!! GAGTAGGGTTTTAGAATGAA+AGG + chr6.4:14217927-14217946 MS.gene85812:intron 35.0%
!!! GGTTTTAGAATGAAAGGAAG+AGG + chr6.4:14217933-14217952 MS.gene85812:intron 35.0%
!!! TGGTGTTGCATTTTATAGAG+GGG + chr6.4:14214524-14214543 MS.gene85812:CDS 35.0%
!!! TTTCTCATTGTTGGTGGTTT+TGG + chr6.4:14215713-14215732 MS.gene85812:intron 35.0%
AAACCCTATTGTCGTAGCTT+AGG + chr6.4:14213265-14213284 MS.gene85812:intron 40.0%
AACCCTATTGTCGTAGCTTA+GGG + chr6.4:14213266-14213285 MS.gene85812:intron 40.0%
ACATAATTAGACCCTTGAGC+AGG - chr6.4:14216755-14216774 None:intergenic 40.0%
ACTTCATTTCATGGACAGCT+TGG + chr6.4:14215626-14215645 MS.gene85812:intron 40.0%
AGGCACATTAATAATGTGGG+GGG - chr6.4:14215367-14215386 None:intergenic 40.0%
AGGTGCCTAAGGATTTAAGA+GGG + chr6.4:14217953-14217972 MS.gene85812:intron 40.0%
ATAGAGTCAGGATGCAAGAA+AGG - chr6.4:14215575-14215594 None:intergenic 40.0%
ATCAACGGAGAAAACAGTGA+AGG + chr6.4:14215160-14215179 MS.gene85812:intron 40.0%
CACAAACTTCAACATCAGGT+GGG - chr6.4:14216531-14216550 None:intergenic 40.0%
CAGAGTCCATATCAAACAGT+GGG - chr6.4:14215464-14215483 None:intergenic 40.0%
CAGATAAAAAGATAGCCAGG+AGG - chr6.4:14217177-14217196 None:intergenic 40.0%
CAGCTACATAAAGCCATAAC+TGG - chr6.4:14217568-14217587 None:intergenic 40.0%
CAGGAGAGATTTCAAAGTCT+TGG + chr6.4:14214504-14214523 MS.gene85812:CDS 40.0%
CAGTCTGATCTGCAACATTA+TGG - chr6.4:14213676-14213695 None:intergenic 40.0%
CCAAATATCCCCTTTCAGTT+AGG + chr6.4:14217853-14217872 MS.gene85812:intron 40.0%
CCAACTAACCTAACTGAAAG+GGG - chr6.4:14217864-14217883 None:intergenic 40.0%
CCACCAACAATGAGAAAACT+TGG - chr6.4:14215710-14215729 None:intergenic 40.0%
CCACTTGTAGAGTAACTAGT+CGG - chr6.4:14214356-14214375 None:intergenic 40.0%
CCTAACTGAAAGGGGATATT+TGG - chr6.4:14217856-14217875 None:intergenic 40.0%
CCTCATTTCTTCATGTGTAG+AGG + chr6.4:14214826-14214845 MS.gene85812:intron 40.0%
CCTCTACACATGAAGAAATG+AGG - chr6.4:14214829-14214848 None:intergenic 40.0%
CTAAGGCAACCAATGAATGA+TGG - chr6.4:14215801-14215820 None:intergenic 40.0%
CTTCATTTCATGGACAGCTT+GGG + chr6.4:14215627-14215646 MS.gene85812:intron 40.0%
GAAGCTGGTAGTTAACATAG+GGG + chr6.4:14217623-14217642 MS.gene85812:intron 40.0%
GAATTGCGGTAATCATATCG+TGG + chr6.4:14212898-14212917 MS.gene85812:intron 40.0%
GACCAACTAACCTAACTGAA+AGG - chr6.4:14217866-14217885 None:intergenic 40.0%
GAGGATAAAACGTAATGTGG+GGG - chr6.4:14215345-14215364 None:intergenic 40.0%
GAGTAAAGTTCTTCTGCGTA+AGG - chr6.4:14212506-14212525 None:intergenic 40.0%
GAGTTATGCAATTCCTGAGT+GGG - chr6.4:14215279-14215298 None:intergenic 40.0%
GGAAAAAGGGAAGCTAACTA+AGG - chr6.4:14215818-14215837 None:intergenic 40.0%
GGAGAACTGTGTTTAAATCG+CGG + chr6.4:14213489-14213508 MS.gene85812:intron 40.0%
GGAGGATAAAACGTAATGTG+GGG - chr6.4:14215346-14215365 None:intergenic 40.0%
GGGAGGATAAAACGTAATGT+GGG - chr6.4:14215347-14215366 None:intergenic 40.0%
GTAAACGAGAACACAGCAAT+CGG - chr6.4:14214550-14214569 None:intergenic 40.0%
GTAACACTTATTTAGAGGGG+GGG - chr6.4:14215314-14215333 None:intergenic 40.0%
GTACAGTTTAGCATAGAGTC+AGG - chr6.4:14215587-14215606 None:intergenic 40.0%
GTCATCGATCTGCAATTCTT+TGG - chr6.4:14214334-14214353 None:intergenic 40.0%
GTCATGCAGAGAATGGAAAA+AGG - chr6.4:14215832-14215851 None:intergenic 40.0%
GTGAAGCTGGTAGTTAACAT+AGG + chr6.4:14217621-14217640 MS.gene85812:intron 40.0%
GTTTCTCTGTATTATGCTGC+TGG - chr6.4:14215547-14215566 None:intergenic 40.0%
TAAATACTACTGTCCCAAGC+GGG - chr6.4:14217532-14217551 None:intergenic 40.0%
TCCAACCAAATTGTACGTAG+AGG - chr6.4:14215656-14215675 None:intergenic 40.0%
TCCTCTACGTACAATTTGGT+TGG + chr6.4:14215652-14215671 MS.gene85812:intron 40.0%
TGGAAATTGGTAGGTAGAAG+TGG + chr6.4:14214003-14214022 MS.gene85812:intron 40.0%
TGTAATGTGTTACAAGGCAC+TGG - chr6.4:14216192-14216211 None:intergenic 40.0%
TGTCAATTGGGATGCATTGT+TGG + chr6.4:14212792-14212811 MS.gene85812:intron 40.0%
TTATCGTTCTTGGAGACAGT+GGG + chr6.4:14212530-14212549 MS.gene85812:CDS 40.0%
TTTGATACCGTGGAGATTTG+TGG + chr6.4:14213215-14213234 MS.gene85812:intron 40.0%
! ACCCGCATCATGGATATTTT+TGG + chr6.4:14216398-14216417 MS.gene85812:intron 40.0%
! AGGACAAGGTGAAACTTGTT+GGG - chr6.4:14215402-14215421 None:intergenic 40.0%
! ATGTGGTTCGGCACAAAATT+AGG + chr6.4:14214101-14214120 MS.gene85812:intron 40.0%
! CCAAGTTTTCTCATTGTTGG+TGG + chr6.4:14215707-14215726 MS.gene85812:intron 40.0%
! CGACTAGTTACTCTACAAGT+GGG + chr6.4:14214354-14214373 MS.gene85812:intron 40.0%
! CTCTAGCATTGAATGTGGTT+CGG + chr6.4:14214089-14214108 MS.gene85812:intron 40.0%
! CTTGACGAGATTTTGAATCG+CGG + chr6.4:14213080-14213099 MS.gene85812:intron 40.0%
! GTAAGGAATGTTCCCTTTTG+AGG - chr6.4:14216818-14216837 None:intergenic 40.0%
! GTATGTCACTTCAAAGAAGC+TGG + chr6.4:14213562-14213581 MS.gene85812:intron 40.0%
! TATCGCGATTTTTGATACCG+TGG + chr6.4:14213205-14213224 MS.gene85812:intron 40.0%
! TGAAAGGGGATATTTGGAGT+TGG - chr6.4:14217850-14217869 None:intergenic 40.0%
! TGTGGTTCGGCACAAAATTA+GGG + chr6.4:14214102-14214121 MS.gene85812:intron 40.0%
! TTTAAGAGGGTCTTATGGGA+TGG + chr6.4:14217966-14217985 MS.gene85812:intron 40.0%
!! AAGAAGCACTTCAGAGTGAA+TGG + chr6.4:14217667-14217686 MS.gene85812:intron 40.0%
!! AGCTCTAGGTCAAATTTACG+AGG - chr6.4:14215965-14215984 None:intergenic 40.0%
!! AGCTGCTTTGAAATGAGACA+CGG - chr6.4:14213722-14213741 None:intergenic 40.0%
!! GAGTTTGTTAAAGTGAGTGC+AGG - chr6.4:14216141-14216160 None:intergenic 40.0%
!! GGAAAAGTGCTTGGATTAGA+AGG - chr6.4:14216642-14216661 None:intergenic 40.0%
!! TGCATGATTTTGGGTCATAG+TGG + chr6.4:14212763-14212782 MS.gene85812:intron 40.0%
!! TTGAATATCTCGGAGTGTTG+TGG + chr6.4:14212934-14212953 MS.gene85812:intron 40.0%
AAGCAGCTGAATTGCGGTAA+TGG + chr6.4:14213734-14213753 MS.gene85812:intron 45.0%
ACACCCTAAGCTACGACAAT+AGG - chr6.4:14213272-14213291 None:intergenic 45.0%
ACAGTGATGAACCACAGAGA+AGG + chr6.4:14215223-14215242 MS.gene85812:intron 45.0%
ACGAAGCTGCCAGTTAACAT+AGG + chr6.4:14217501-14217520 MS.gene85812:intron 45.0%
ACTGTCAAGGCTTTACTGAC+TGG + chr6.4:14216213-14216232 MS.gene85812:intron 45.0%
AGAAGCTGTCATGCAGAGAA+TGG - chr6.4:14215839-14215858 None:intergenic 45.0%
AGATAGAGTATAGGACCTCC+TGG + chr6.4:14217159-14217178 MS.gene85812:intron 45.0%
AGGTCTGCGACTACAACATT+AGG - chr6.4:14213528-14213547 None:intergenic 45.0%
ATCTCGGCGTGATGTACATT+CGG - chr6.4:14212875-14212894 None:intergenic 45.0%
ATGCGGTCTTGGCAATACAT+AGG - chr6.4:14216885-14216904 None:intergenic 45.0%
ATTGAGCCGTTATGGGATTG+CGG + chr6.4:14218038-14218057 MS.gene85812:intron 45.0%
ATTTCAGAGTGGCCGAATTG+TGG + chr6.4:14213437-14213456 MS.gene85812:intron 45.0%
CAAACCTCAAACGCACTCAA+AGG - chr6.4:14214754-14214773 None:intergenic 45.0%
CACATTAATAATGTGGGGGG+AGG - chr6.4:14215364-14215383 None:intergenic 45.0%
CACCCTAAGCTACGACAATA+GGG - chr6.4:14213271-14213290 None:intergenic 45.0%
CAGTGATGAACCACAGAGAA+GGG + chr6.4:14215224-14215243 MS.gene85812:intron 45.0%
CATGGTCCCACTGTTTGATA+TGG + chr6.4:14215455-14215474 MS.gene85812:intron 45.0%
CATGTCTTGCTCACGTTCAT+TGG - chr6.4:14216911-14216930 None:intergenic 45.0%
CCACAAACTTCAACATCAGG+TGG - chr6.4:14216532-14216551 None:intergenic 45.0%
CCACCTGATGTTGAAGTTTG+TGG + chr6.4:14216529-14216548 MS.gene85812:intron 45.0%
CCCCTTTCAGTTAGGTTAGT+TGG + chr6.4:14217861-14217880 MS.gene85812:intron 45.0%
CGAAGCTGCCAGTTAACATA+GGG + chr6.4:14217502-14217521 MS.gene85812:intron 45.0%
CTCCTCTTGGATGGTAATAC+AGG - chr6.4:14215101-14215120 None:intergenic 45.0%
CTGTATTACCATCCAAGAGG+AGG + chr6.4:14215099-14215118 MS.gene85812:intron 45.0%
GAAGCTGCCAGTTAACATAG+GGG + chr6.4:14217503-14217522 MS.gene85812:intron 45.0%
GACCCTGTTCCAAAGCAAAT+GGG - chr6.4:14215739-14215758 None:intergenic 45.0%
GACCTGTATTACCATCCAAG+AGG + chr6.4:14215096-14215115 MS.gene85812:intron 45.0%
GAGGACAAGGTGAAACTTGT+TGG - chr6.4:14215403-14215422 None:intergenic 45.0%
GATTCCTTTGAGTGCGTTTG+AGG + chr6.4:14214747-14214766 MS.gene85812:intron 45.0%
GCAGAGTCCATATCAAACAG+TGG - chr6.4:14215465-14215484 None:intergenic 45.0%
GCTCCACAAACTTCAACATC+AGG - chr6.4:14216535-14216554 None:intergenic 45.0%
GGAGTTATGCAATTCCTGAG+TGG - chr6.4:14215280-14215299 None:intergenic 45.0%
GGCGGTTTCAATCAATGTTG+TGG + chr6.4:14213812-14213831 MS.gene85812:intron 45.0%
GGCTTCCTCTACGTACAATT+TGG + chr6.4:14215648-14215667 MS.gene85812:intron 45.0%
GGGGAGGATAAAACGTAATG+TGG - chr6.4:14215348-14215367 None:intergenic 45.0%
GGTAAAATACTGCCTCGATC+AGG + chr6.4:14213340-14213359 MS.gene85812:intron 45.0%
GGTCTGCGACTACAACATTA+GGG - chr6.4:14213527-14213546 None:intergenic 45.0%
GTGCAGACACTCAGAAATCT+CGG + chr6.4:14217988-14218007 MS.gene85812:intron 45.0%
GTTATCGTTCTTGGAGACAG+TGG + chr6.4:14212529-14212548 MS.gene85812:CDS 45.0%
TCTGTATTATGCTGCTGGAC+AGG - chr6.4:14215542-14215561 None:intergenic 45.0%
TGTAGAACCAATCCTCCTCT+TGG - chr6.4:14215114-14215133 None:intergenic 45.0%
TGTAGATATGGGACACTGCA+GGG + chr6.4:14214481-14214500 MS.gene85812:intron 45.0%
TGTTCCAGAGAATGAGCAGA+GGG + chr6.4:14218476-14218495 MS.gene85812:CDS 45.0%
TTACCATCCAAGAGGAGGAT+TGG + chr6.4:14215104-14215123 MS.gene85812:intron 45.0%
TTCAATATCGCGGAGAGTTG+TGG + chr6.4:14213130-14213149 MS.gene85812:intron 45.0%
TTCTTCCTACTGTCCCAAGT+GGG - chr6.4:14217652-14217671 None:intergenic 45.0%
TTGTAGATATGGGACACTGC+AGG + chr6.4:14214480-14214499 MS.gene85812:intron 45.0%
TTGTTCCAGAGAATGAGCAG+AGG + chr6.4:14218475-14218494 MS.gene85812:CDS 45.0%
! AATGCCTTTTGCTTATGGGC+TGG + chr6.4:14215505-14215524 MS.gene85812:intron 45.0%
! CAATTCCTGAGTGGGTTTCT+GGG - chr6.4:14215271-14215290 None:intergenic 45.0%
! CACGCCGAGATTTTGAATTG+CGG + chr6.4:14212884-14212903 MS.gene85812:intron 45.0%
! CAGTTTTGCTAGTGGCTGAA+GGG + chr6.4:14215865-14215884 MS.gene85812:intron 45.0%
! CCGACTAGTTACTCTACAAG+TGG + chr6.4:14214353-14214372 MS.gene85812:intron 45.0%
! CTCACGTTCATTGGCTAATG+CGG - chr6.4:14216902-14216921 None:intergenic 45.0%
! GAAACCCTGTTCGGTGATAT+AGG - chr6.4:14216241-14216260 None:intergenic 45.0%
! GAAATCTGATGGGTACCAAC+TGG - chr6.4:14215761-14215780 None:intergenic 45.0%
! GAGGTGCCTAAGGATTTAAG+AGG + chr6.4:14217952-14217971 MS.gene85812:intron 45.0%
! TACACTTGATAACTGGCACG+AGG + chr6.4:14214596-14214615 MS.gene85812:CDS 45.0%
! TTCATTGGCTAATGCGGTCT+TGG - chr6.4:14216896-14216915 None:intergenic 45.0%
!! AGGCACTGGTTAGTTTCTGA+CGG - chr6.4:14216178-14216197 None:intergenic 45.0%
!! ATGAAAGGAAGAGGTGCCTA+AGG + chr6.4:14217942-14217961 MS.gene85812:intron 45.0%
!! CAAAGCACTGAAACCCTGTT+CGG - chr6.4:14216250-14216269 None:intergenic 45.0%
!! GACAAGGTGAAACTTGTTGG+GGG - chr6.4:14215400-14215419 None:intergenic 45.0%
!! GGACAAGGTGAAACTTGTTG+GGG - chr6.4:14215401-14215420 None:intergenic 45.0%
!! TGCTCATTCTCTGGAACAAC+AGG - chr6.4:14218474-14218493 None:intergenic 45.0%
!!! TGGTTTTGGCCCATTTGCTT+TGG + chr6.4:14215727-14215746 MS.gene85812:intron 45.0%
AACATAGGGGACTCCCACTT+GGG + chr6.4:14217636-14217655 MS.gene85812:intron 50.0%
AAGGAGTGGTGTGCCTCAAA+AGG + chr6.4:14216802-14216821 MS.gene85812:CDS 50.0%
AAGGAGTTGACCCTTCTCTG+TGG - chr6.4:14215237-14215256 None:intergenic 50.0%
AGAGCTTGTGCAGAGAGCAA+GGG - chr6.4:14215914-14215933 None:intergenic 50.0%
AGATCAGTTACTGGCCACCA+TGG + chr6.4:14218064-14218083 MS.gene85812:intron 50.0%
AGGAGTGGTGTGCCTCAAAA+GGG + chr6.4:14216803-14216822 MS.gene85812:CDS 50.0%
ATCGAGGCCACAAATCTCCA+CGG - chr6.4:14213225-14213244 None:intergenic 50.0%
CATCCTGCTACATGTCATCC+CGG + chr6.4:14218227-14218246 MS.gene85812:intron 50.0%
CTTCTCCCACTAAGTGGAGT+CGG - chr6.4:14217060-14217079 None:intergenic 50.0%
CTTCTTCCTACTGTCCCAAG+TGG - chr6.4:14217653-14217672 None:intergenic 50.0%
GAACCAATCCTCCTCTTGGA+TGG - chr6.4:14215110-14215129 None:intergenic 50.0%
GAGTGGCCGAATTGTGGTAA+TGG + chr6.4:14213443-14213462 MS.gene85812:intron 50.0%
GGACCCTGTTCCAAAGCAAA+TGG - chr6.4:14215740-14215759 None:intergenic 50.0%
GGTGCCTATATCACCGAACA+GGG + chr6.4:14216234-14216253 MS.gene85812:intron 50.0%
GTTCCAGAGAATGAGCAGAG+GGG + chr6.4:14218477-14218496 MS.gene85812:CDS 50.0%
GTTGTCAATCCCAGACAACC+CGG - chr6.4:14218260-14218279 None:intergenic 50.0%
TAACATAGGGGACTCCCACT+TGG + chr6.4:14217635-14217654 MS.gene85812:intron 50.0%
TACTGCCTCGATCAGGATAG+CGG + chr6.4:14213347-14213366 MS.gene85812:intron 50.0%
TAGAACCCAGAAACCCACTC+AGG + chr6.4:14215263-14215282 MS.gene85812:intron 50.0%
TCAGCCACTAGCAAAACTGC+CGG - chr6.4:14215864-14215883 None:intergenic 50.0%
TCCTTTGGGCAAGAAGACTC+AGG - chr6.4:14217271-14217290 None:intergenic 50.0%
TCTGCATGACAGCTTCTACC+CGG + chr6.4:14215842-14215861 MS.gene85812:intron 50.0%
TCTGTGCCGCAATCCCATAA+CGG - chr6.4:14218047-14218066 None:intergenic 50.0%
TGAGACTAGGCCCCAAAAGA+TGG - chr6.4:14217809-14217828 None:intergenic 50.0%
TGCTGCGATTGAGCCGTTAT+GGG + chr6.4:14218031-14218050 MS.gene85812:intron 50.0%
TGGGATGCATTGTTGGAGAG+TGG + chr6.4:14212799-14212818 MS.gene85812:intron 50.0%
TGGTCCAGCCCATAAGCAAA+AGG - chr6.4:14215512-14215531 None:intergenic 50.0%
TGGTGCCTATATCACCGAAC+AGG + chr6.4:14216233-14216252 MS.gene85812:intron 50.0%
TTGCGGCACAGATCAGTTAC+TGG + chr6.4:14218055-14218074 MS.gene85812:intron 50.0%
TTTCCCAGCGATTGCAATCG+AGG - chr6.4:14213241-14213260 None:intergenic 50.0%
TTTCTCCGCTATCCTGATCG+AGG - chr6.4:14213355-14213374 None:intergenic 50.0%
! GCAATTCCTGAGTGGGTTTC+TGG - chr6.4:14215272-14215291 None:intergenic 50.0%
! GCAGTTTTGCTAGTGGCTGA+AGG + chr6.4:14215864-14215883 MS.gene85812:intron 50.0%
! GCTGCTGGACAGGAAGATTT+TGG - chr6.4:14215532-14215551 None:intergenic 50.0%
! GTGGGACCATGCTAGCTTAT+TGG - chr6.4:14215446-14215465 None:intergenic 50.0%
! TGTAGCCGACTCCACTTAGT+GGG + chr6.4:14217052-14217071 MS.gene85812:intron 50.0%
! TTGTAGCCGACTCCACTTAG+TGG + chr6.4:14217051-14217070 MS.gene85812:intron 50.0%
!! GCACGAGGAGTTTCTGAAAC+AGG + chr6.4:14214611-14214630 MS.gene85812:CDS 50.0%
!! GGCCCATTTGCTTTGGAACA+GGG + chr6.4:14215734-14215753 MS.gene85812:intron 50.0%
!! TGGCCCATTTGCTTTGGAAC+AGG + chr6.4:14215733-14215752 MS.gene85812:intron 50.0%
!! TTCTCTGGAACAACAGGCTC+CGG - chr6.4:14218468-14218487 None:intergenic 50.0%
AACATAGGGGACTCCCGCTT+GGG + chr6.4:14217516-14217535 MS.gene85812:intron 55.0%
ACATAGGGGGCTGCCAGTTA+TGG + chr6.4:14217552-14217571 MS.gene85812:intron 55.0%
ATGTCATCCCGGCTGTTGTC+CGG + chr6.4:14218238-14218257 MS.gene85812:intron 55.0%
CAGCCACTAGCAAAACTGCC+GGG - chr6.4:14215863-14215882 None:intergenic 55.0%
CCAAGCCTTCTCCCACTAAG+TGG - chr6.4:14217066-14217085 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG + chr6.4:14217063-14217082 MS.gene85812:intron 55.0%
CGACTCCACTTAGTGGGAGA+AGG + chr6.4:14217058-14217077 MS.gene85812:intron 55.0%
CGGGAGTCCCCTATGTTAAC+TGG - chr6.4:14217513-14217532 None:intergenic 55.0%
CGGGATGACATGTAGCAGGA+TGG - chr6.4:14218229-14218248 None:intergenic 55.0%
GAGAGCTTGTGCAGAGAGCA+AGG - chr6.4:14215915-14215934 None:intergenic 55.0%
GCCTGAGTCTTCTTGCCCAA+AGG + chr6.4:14217267-14217286 MS.gene85812:intron 55.0%
GGAACAACAGGCTCCGGAAT+AGG - chr6.4:14218462-14218481 None:intergenic 55.0%
GGAGTCGGCTACAAGCTACA+TGG - chr6.4:14217045-14217064 None:intergenic 55.0%
GGCAAGGACGTCATGCATGA+AGG + chr6.4:14218090-14218109 MS.gene85812:intron 55.0%
GTGCTGCGATTGAGCCGTTA+TGG + chr6.4:14218030-14218049 MS.gene85812:intron 55.0%
TAACATAGGGGACTCCCGCT+TGG + chr6.4:14217515-14217534 MS.gene85812:intron 55.0%
TAGAGGGGGGGCAACGAATT+GGG - chr6.4:14215302-14215321 None:intergenic 55.0%
TGGCCTCGATTGCAATCGCT+GGG + chr6.4:14213235-14213254 MS.gene85812:intron 55.0%
TTAGAGGGGGGGCAACGAAT+TGG - chr6.4:14215303-14215322 None:intergenic 55.0%
! CTACCCGGCAGTTTTGCTAG+TGG + chr6.4:14215857-14215876 MS.gene85812:intron 55.0%
! GACGTCATGCATGAAGGTGC+AGG + chr6.4:14218096-14218115 MS.gene85812:intron 55.0%
!! GCTTTGGAACAGGGTCCAGT+TGG + chr6.4:14215743-14215762 MS.gene85812:intron 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG + chr6.4:14216692-14216711 MS.gene85812:CDS 55.0%
AGACAACCCGGACAACAGCC+GGG - chr6.4:14218248-14218267 None:intergenic 60.0%
AGAGGGGGGGCAACGAATTG+GGG - chr6.4:14215301-14215320 None:intergenic 60.0%
AGTTACTGGCCACCATGGCG+AGG + chr6.4:14218069-14218088 MS.gene85812:intron 60.0%
ATGACGTCCTTGCCTCGCCA+TGG - chr6.4:14218084-14218103 None:intergenic 60.0%
CAGACAACCCGGACAACAGC+CGG - chr6.4:14218249-14218268 None:intergenic 60.0%
CAGCCGGGATGACATGTAGC+AGG - chr6.4:14218233-14218252 None:intergenic 60.0%
CCACCCCTCTGCTCATTCTC+TGG - chr6.4:14218483-14218502 None:intergenic 60.0%
CCAGAGAATGAGCAGAGGGG+TGG + chr6.4:14218480-14218499 MS.gene85812:CDS 60.0%
GATATGGGACACTGCAGGGC+AGG + chr6.4:14214485-14214504 MS.gene85812:intron 60.0%
GGACTCCCACTTGGGACAGT+AGG + chr6.4:14217644-14217663 MS.gene85812:intron 60.0%
GGCGGGAATAGTCGAGTGGT+AGG + chr6.4:14216696-14216715 MS.gene85812:intron 60.0%
GGCTGTTGTCCGGGTTGTCT+GGG + chr6.4:14218248-14218267 MS.gene85812:intron 60.0%
GTGGCCTCGATTGCAATCGC+TGG + chr6.4:14213234-14213253 MS.gene85812:intron 60.0%
TGTCATCCCGGCTGTTGTCC+GGG + chr6.4:14218239-14218258 MS.gene85812:intron 60.0%
TGTGCAGAGAGCAAGGGCCT+TGG - chr6.4:14215908-14215927 None:intergenic 60.0%
ACGTCCTTGCCTCGCCATGG+TGG - chr6.4:14218081-14218100 None:intergenic 65.0%
CGGCTGTTGTCCGGGTTGTC+TGG + chr6.4:14218247-14218266 MS.gene85812:intron 65.0%
CTGGCCACCATGGCGAGGCA+AGG + chr6.4:14218074-14218093 MS.gene85812:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 14212499 14218515 14212499 ID=MS.gene85812
chr6.4 mRNA 14212499 14218515 14212499 ID=MS.gene85812.t1;Parent=MS.gene85812
chr6.4 exon 14212499 14212551 14212499 ID=MS.gene85812.t1.exon1;Parent=MS.gene85812.t1
chr6.4 CDS 14212499 14212551 14212499 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
chr6.4 exon 14212643 14212669 14212643 ID=MS.gene85812.t1.exon2;Parent=MS.gene85812.t1
chr6.4 CDS 14212643 14212669 14212643 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
chr6.4 exon 14214272 14214371 14214272 ID=MS.gene85812.t1.exon3;Parent=MS.gene85812.t1
chr6.4 CDS 14214272 14214371 14214272 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
chr6.4 exon 14214486 14214632 14214486 ID=MS.gene85812.t1.exon4;Parent=MS.gene85812.t1
chr6.4 CDS 14214486 14214632 14214486 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
chr6.4 exon 14216633 14216713 14216633 ID=MS.gene85812.t1.exon5;Parent=MS.gene85812.t1
chr6.4 CDS 14216633 14216713 14216633 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
chr6.4 exon 14216784 14216929 14216784 ID=MS.gene85812.t1.exon6;Parent=MS.gene85812.t1
chr6.4 CDS 14216784 14216929 14216784 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
chr6.4 exon 14218449 14218515 14218449 ID=MS.gene85812.t1.exon7;Parent=MS.gene85812.t1
chr6.4 CDS 14218449 14218515 14218449 ID=cds.MS.gene85812.t1;Parent=MS.gene85812.t1
Gene Sequence

>MS.gene85812

ATGGCCTTACGCAGAAGAACTTTACTCAAAGTTATCGTTCTTGGAGACAGTGGGTACGTTCCTAATCCACAAACTTCATTTTCAGTTTTTTTTTTTTTTTTTTTTACTTTTTCTCTAACGTGATTTTGTTTTCATTTTTGTTAGGGTTGGAAAAACTTCGTTGATGAATCAGTATCCTTTGCAATTTTATGATTTGGTATTTGATTAATTTTTTTTATTTTTTTTATTATTATTACTCATTTGATTTTAGTTTATTGCTTCATTTGCATGATTTTGGGTCATAGTGGTGTTTATGTCAATTGGGATGCATTGTTGGAGAGTGGAATTTATGATTGTGGTTGAGAATTTGTGTTTAATTTAATTTTTACTATATCCGAATGTACATCACGCCGAGATTTTGAATTGCGGTAATCATATCGTGGTTTTATCGGTATTTTGAATATCTCGGAGTGTTGTGGTTGTAATGTAGATTTTATCGCAATTTTCAATATCGTGTAGGGATGTATTTTTGGAGATTCGAATTAATAATTGTGGTTGAGAATTTTTGTTGAATTTAATTTTTACTATTTTCGAATGCATCTCTTGACGAGATTTTGAATCGCGGTAATCATATCGTGATTTTATCGTGATTTTCAATATCGCGGAGAGTTGTGGTTGTATTGTAGATTTTATCGCAATTTTCAATATTGGGTTGAATGGTGGTTTTTATCGCGATTTTTGATACCGTGGAGATTTGTGGCCTCGATTGCAATCGCTGGGAAATCAAAAACCCTATTGTCGTAGCTTAGGGTGTAGTCTCAAAACTTTATTTATCGTTATCTTTGATATTGATGAGAATTGGGGTAAAATACTGCCTCGATCAGGATAGCGGAGAAATTGAGAACTCTAATGTTGTAGTTTAGATCGTAGTTGTGCACCGTTGTTTGAAACTCTGTCTTATTTCAGAGTGGCCGAATTGTGGTAATGGTTTGTCACAGTCATCGATAATATGGAGAACTGTGTTTAAATCGCGGAGAAATAAAAAACCCTAATGTTGTAGTCGCAGACCTTTATGTAAAACTCTGTATGTCACTTCAAAGAAGCTGGATCATTGTAATGGTTAGTCACAATCTTTGATATTGCTGAGAATTGTAGTGAAACTGAGCCTCAATTGCAGTTGTTTAGAAATCATAAGCCATAATGTTGCAGATCAGACTGTAGTCGTAGACTTCTATTCGAAACCGTGTCTCATTTCAAAGCAGCTGAATTGCGGTAATGGTTCATCGTGATCTTTGATATTGCTGACAATTGTAGTTTAATGCATGGAGTTTAATGGCGGTTTCAATCAATGTTGTGGAGAAATAAAAAAACCCTATTGTTGCATCTTAGACTGTAGTCCCAGATCTTTATTTAAAACTGTATCACTTCAGAGCAGCTAAATACATTAATGAGCCATTGAAATTTTAAATAATAGAGGGCAAATACTATTTGGCATACTCAATGAATTAGCATGCTTAATGAATATTGGAAATTGGTAGGTAGAAGTGGTCCTTACGATTTTCTCTGAAATTATGGCTTTTTAGCACTACTCTAAAATGTATTGTTGTTTTTCTCTAGCATTGAATGTGGTTCGGCACAAAATTAGGGTGATACACATTTAATGTTGCTGAGTTTCTTTAAAGATTACGCTTCTGTAAAACTTATGATTATTTGATTTAGATCGATTTAAGGTTATTCAAGGACTATTTTATTTTTCAAATATCGGCATATGTGGGCCATTAACTACTTGTATAGATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCTACAATTGGTGCTGACTTTGTAACCAAAGAATTGCAGATCGATGACCGACTAGTTACTCTACAAGTGGGTTTTCTAGTTCATTGTTATTTCAGTATTATTTTTTTTATTGTGTTTAAGATTATTATAATTATAATGTAAATTATGTATATTTTATTGATTTATGTGTTTGTGTTGTAGATATGGGACACTGCAGGGCAGGAGAGATTTCAAAGTCTTGGTGTTGCATTTTATAGAGGGGCCGATTGCTGTGTTCTCGTTTACGATGTTAATGTGATGAAGTCATTTGATACACTTGATAACTGGCACGAGGAGTTTCTGAAACAGGTTTACTATGTCTCCTCTATTTTTCTAATTTTGTCACTCTCGGTGATTTGCATGCTAACACTCTTTCAAATGTTGAGTCCAAATAAATTATAGGCTATACATATAAAAAAAATAGATTCCTTTGAGTGCGTTTGAGGTTTGTGAGACAAATTCTGAATATAAGCTGCTTTGAAATAATGATGACAATGGAGAACCTCATTTCTTCATGTGTAGAGGATTAGTGTGATTACGGATTTTAAACTTGGCATTATACTTACTTATTGCAGCAGAAATTGATTATGATTATTTCATATAGCTTTCATATGTTAATTATATATGTCATAACTCATGACCATGGTTTTGCTTTATAGCAACTTCTCCAATAGTTTGTTGAGACAATTGTTGCATCTGAATGTTTCTTGTGACGTTAAACAATAACATAAACATAGCTTAATCCTCCAGTATTTAGTTCTTACTTGTCTTGGACCTGTATTACCATCCAAGAGGAGGATTGGTTCTACATTTCCTCTTACAATGGTTATGAATGAATCAACGGAGAAAACAGTGAAGGAAACCAAATTGGATGAATAACCTAACAAACGAAATGGAAAACAGTGATGAACCACAGAGAAGGGTCAACTCCTTACTCTATAGAACCCAGAAACCCACTCAGGAATTGCATAACTCCCCAATTCGTTGCCCCCCCTCTAAATAAGTGTTACTGTTACTTCCCCCACATTACGTTTTATCCTCCCCCCACATTATTAATGTGCCTATAAATACTTCCCCCAACAAGTTTCACCTTGTCCTCAATGTTAATGATGACTAAATCCAATAAGCTAGCATGGTCCCACTGTTTGATATGGACTCTGCCCATTATTATTTCACCAAAGAATGCCTTTTGCTTATGGGCTGGACCAAAATCTTCCTGTCCAGCAGCATAATACAGAGAAACATCTGCCTTTCTTGCATCCTGACTCTATGCTAAACTGTACGTAGCCCATTAATACTATAACTTCATTTCATGGACAGCTTGGGCTTCCTCTACGTACAATTTGGTTGGACTAGTAATCAGACTCATTGCACTCTTAGAGACCAAGTTTTCTCATTGTTGGTGGTTTTGGCCCATTTGCTTTGGAACAGGGTCCAGTTGGTACCCATCAGATTTCACCATTGTATCTTTTTTCCATCATTCATTGGTTGCCTTAGTTAGCTTCCCTTTTTCCATTCTCTGCATGACAGCTTCTACCCGGCAGTTTTGCTAGTGGCTGAAGGGCCAGAATTCTATATAAACCAAGGCCCTTGCTCTCTGCACAAGCTCTCAAGTGAAAATTAATGGCCTGTGAAAATCCTCGTAAATTTGACCTAGAGCTCTATGGCTATATTAAAGATAAGAAAATGATAGGGAATTTTCATATATTTATTGGTTCTCAAGATTGACCTTGATAGTTCAGATTAGCTGTTTGCACACTAGCTTATCCTTCACTTAGATTGATACTAACCTGCTTCACTTAGATTGATACTAACCTGCACTCACTTTAACAAACTCTGAACAATTTAAAACCGTCAGAAACTAACCAGTGCCTTGTAACACATTACATACTGTCAAGGCTTTACTGACTGGTGCCTATATCACCGAACAGGGTTTCAGTGCTTTGAGACAGCAGTACCTTAGTTTGCTGCTAGTTTTTGGCTTTTTACTAAGATTCTGTCCTTTTGTTGTTATTTAGCAAGTCTGGATGTCCTTTTCTCGTCTTCCTTGAATTTCTACGAAGTAAATTATATAACCCGCATCATGGATATTTTTGGTGTGAATGAAGCATTCAAATTCTTATTGAATCAAACATACCACAGTATGATTTGTTATGTAATTGAACTGCTATGGGTAGTAATTTTTCTGTTTGAAGTCATTTGAGCCCACCTGATGTTGAAGTTTGTGGAGCTGACAAATTTTATAATTTGTTTAGTGTGGATGCATAATTTTCCGGTTCATTAATTACCATTTTAATGTTGTGTCACAGGCAAACCCTTCTAATCCAAGCACTTTTCCATTTATATTGCTTGGAAACAAAGTTGATATTGATGGCGGGAATAGTCGAGTGGTAGGCAAATGCTATTGCAGTTATATAATTATTCATCTCCTGCTCAAGGGTCTAATTATGTTCTATACAGGTTTCTGATAAGAAAGCAAAGGAGTGGTGTGCCTCAAAAGGGAACATTCCTTACTTTGAGACATCTGCAAAGGAAGACTTGAATGTTGATGCTGCATTCCTATGTATTGCCAAGACCGCATTAGCCAATGAACGTGAGCAAGACATGTAAGATTTTAATTGTTTTAAATTTAAATTTTGATTATTTTTGTCCAAATATGTTTAGTTCCTAGACATTTTTCTTTATTGTCTATGATAGGACATTATGGTGGCGTTTGATCCATGTAGCTTGTAGCCGACTCCACTTAGTGGGAGAAGGCTTGGTTGTTGTTGTAGACGAATACTGAAATGTTGAATCATTATATGCATCGCACACCAGTTAGTAGTGTTGTGTAGTAGATAGAGTATAGGACCTCCTGGCTATCTTTTTATCTGTAATGTTTTTTATTTTTTTATTTTCCCTGAATACGCATAGCTATAAATCACATGGCTTCTTTGGCTCTTTGCCTGAGTCTTCTTGCCCAAAGGAAAAGATTGTAATTACAGATAATCATTGTTTCTGCTATTTTTGTGATAGACACAAAGTACTTATGTAGTTTTGCATTATTTTTAGGTTTTAGTTTTGGGAAAATGTGATTGTGCCTCTTAACATTTAGTCTGAACTTCTGTTGTTACTAACCAATTGTTTGCATAAACTATCTCTCGGCAAGAAGTGTTGTCTATCGAATTGTAACTTGTAACGAAGCTGCCAGTTAACATAGGGGACTCCCGCTTGGGACAGTAGTATTTAACATAGGGGGCTGCCAGTTATGGCTTTATGTAGCTGCCCATTTCTCACTACTCGTGAAAAAGTTGATTGGTGAAGCTGGTAGTTAACATAGGGGACTCCCACTTGGGACAGTAGGAAGAAGCACTTCAGAGTGAATGGCTCAGCTTCCACAGTTTGATTTTAAACTTTTCCCCATTAAATCTTATAAATTTGATCGTATGGTTTGATCTAATTCAATGATGTGTCATTTATTCATGTACTTACTCGATTTTCTTCCATCTTTTGGGGCCTAGTCTCATTGACTTTTCGTTAGTAACCAACTCCAAATATCCCCTTTCAGTTAGGTTAGTTGGTCAGACATAGTTAGAAGAAATAAGACATGTCACCGAAAAATAAGAGTAGGGTTTTAGAATGAAAGGAAGAGGTGCCTAAGGATTTAAGAGGGTCTTATGGGATGGTGCAGACACTCAGAAATCTCGGTAGTTGATTGCTGTGTTTTGTGCTGCGATTGAGCCGTTATGGGATTGCGGCACAGATCAGTTACTGGCCACCATGGCGAGGCAAGGACGTCATGCATGAAGGTGCAGGCGTGCAGTGAATAGCAAAATAATAATAGAAACTTATAGTAAAATATTTACTTGTATGTATGTAGTATAACATTATGTAGATATATAGTGAAATTATTGAAAGAGAGGCCATCCTGCTACATGTCATCCCGGCTGTTGTCCGGGTTGTCTGGGATTGACAACTATGTTGAATATTTGTTGTGTTTCATTCCATAATTAGGGTAGAGATTCACTTTATTATTTCTAATAAAATGCCATGTTATACTGTCACCTTTCTTTGTATCAGATATGAGATTTTAACAGATGCTTGCTTAACTGACTTCTGAATTCAATATTTCATTATGCCTTGCAGATATTTTCAACCTATTCCGGAGCCTGTTGTTCCAGAGAATGAGCAGAGGGGTGGTTGTGCATGTTGA
Protein sequence

>MS.gene85812.t1

MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFILLGNKVDIDGGNSRVVSDKKAKEWCASKGNIPYFETSAKEDLNVDAAFLCIAKTALANEREQDIYFQPIPEPVVPENEQRGGCAC