Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010553.t1 | XP_003612068.1 | 94.9 | 371 | 18 | 1 | 1 | 370 | 11 | 381 | 2.70E-204 | 721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010553.t1 | Q9SPV4 | 59.0 | 371 | 136 | 6 | 1 | 369 | 1 | 357 | 2.0e-120 | 433.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010553.t1 | B7FIK3 | 94.9 | 371 | 18 | 1 | 1 | 370 | 11 | 381 | 1.9e-204 | 721.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73290 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene049577 | PPI |
| MS.gene063148 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene008450 | PPI |
| MS.gene52320 | MS.gene010553 | PPI |
| MS.gene033734 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene033735 | PPI |
| MS.gene010553 | MS.gene52303 | PPI |
| MS.gene010553 | MS.gene76430 | PPI |
| MS.gene010553 | MS.gene000556 | PPI |
| MS.gene010553 | MS.gene02421 | PPI |
| MS.gene07908 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene024299 | PPI |
| MS.gene68796 | MS.gene010553 | PPI |
| MS.gene64697 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene012028 | PPI |
| MS.gene99450 | MS.gene010553 | PPI |
| MS.gene033748 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene033750 | PPI |
| MS.gene010553 | MS.gene73369 | PPI |
| MS.gene68203 | MS.gene010553 | PPI |
| MS.gene024315 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene024314 | PPI |
| MS.gene59406 | MS.gene010553 | PPI |
| MS.gene010553 | MS.gene25135 | PPI |
| MS.gene037613 | MS.gene010553 | PPI |
| MS.gene014262 | MS.gene010553 | PPI |
| MS.gene024301 | MS.gene010553 | PPI |
| MS.gene87476 | MS.gene010553 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010553.t1 | MTR_5g020940 | 94.879 | 371 | 18 | 1 | 1 | 370 | 11 | 381 | 0.0 | 738 |
| MS.gene010553.t1 | MTR_8g077040 | 70.380 | 368 | 109 | 0 | 1 | 368 | 1 | 368 | 0.0 | 569 |
| MS.gene010553.t1 | MTR_3g467270 | 66.396 | 369 | 123 | 1 | 1 | 369 | 1 | 368 | 0.0 | 540 |
| MS.gene010553.t1 | MTR_4g018820 | 62.973 | 370 | 126 | 2 | 1 | 370 | 1 | 359 | 2.57e-178 | 499 |
| MS.gene010553.t1 | MTR_8g076900 | 62.060 | 369 | 132 | 1 | 1 | 369 | 1 | 361 | 2.07e-175 | 492 |
| MS.gene010553.t1 | MTR_8g020690 | 58.108 | 370 | 143 | 3 | 1 | 369 | 1 | 359 | 7.68e-162 | 457 |
| MS.gene010553.t1 | MTR_6g056070 | 59.189 | 370 | 136 | 3 | 1 | 369 | 1 | 356 | 9.91e-162 | 457 |
| MS.gene010553.t1 | MTR_8g020700 | 57.682 | 371 | 142 | 2 | 1 | 370 | 1 | 357 | 1.00e-161 | 457 |
| MS.gene010553.t1 | MTR_8g076900 | 66.939 | 245 | 81 | 0 | 1 | 245 | 1 | 245 | 5.20e-123 | 355 |
| MS.gene010553.t1 | MTR_8g020700 | 61.961 | 255 | 96 | 1 | 1 | 254 | 1 | 255 | 2.42e-118 | 343 |
| MS.gene010553.t1 | MTR_3g117060 | 43.883 | 376 | 198 | 3 | 1 | 370 | 1 | 369 | 7.47e-112 | 331 |
| MS.gene010553.t1 | MTR_3g467560 | 45.187 | 374 | 188 | 5 | 1 | 368 | 25 | 387 | 2.34e-105 | 315 |
| MS.gene010553.t1 | MTR_1g022455 | 44.675 | 385 | 190 | 7 | 1 | 369 | 1 | 378 | 3.59e-103 | 309 |
| MS.gene010553.t1 | MTR_1g022465 | 44.156 | 385 | 191 | 8 | 1 | 369 | 1 | 377 | 5.60e-102 | 306 |
| MS.gene010553.t1 | MTR_5g046110 | 40.107 | 374 | 204 | 3 | 1 | 368 | 61 | 420 | 5.33e-97 | 295 |
| MS.gene010553.t1 | MTR_7g084620 | 42.021 | 376 | 197 | 8 | 1 | 368 | 1 | 363 | 5.66e-94 | 285 |
| MS.gene010553.t1 | MTR_7g084350 | 39.037 | 374 | 209 | 5 | 3 | 368 | 1 | 363 | 6.51e-89 | 272 |
| MS.gene010553.t1 | MTR_8g077030 | 54.338 | 219 | 78 | 2 | 1 | 219 | 1 | 197 | 3.06e-76 | 244 |
| MS.gene010553.t1 | MTR_7g084330 | 37.072 | 321 | 168 | 7 | 54 | 368 | 39 | 331 | 5.22e-62 | 202 |
| MS.gene010553.t1 | MTR_3g054330 | 34.986 | 363 | 198 | 11 | 1 | 343 | 10 | 354 | 3.95e-57 | 191 |
| MS.gene010553.t1 | MTR_5g093900 | 31.202 | 391 | 231 | 11 | 1 | 367 | 13 | 389 | 2.82e-51 | 176 |
| MS.gene010553.t1 | MTR_3g052700 | 32.626 | 377 | 221 | 11 | 1 | 358 | 13 | 375 | 2.95e-50 | 173 |
| MS.gene010553.t1 | MTR_1g108660 | 35.294 | 306 | 154 | 9 | 50 | 344 | 38 | 310 | 9.02e-50 | 170 |
| MS.gene010553.t1 | MTR_6g015620 | 32.520 | 123 | 80 | 1 | 247 | 369 | 18 | 137 | 6.08e-16 | 74.3 |
| MS.gene010553.t1 | MTR_7g084340 | 29.630 | 135 | 85 | 2 | 237 | 368 | 2 | 129 | 7.13e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010553.t1 | AT3G11480 | 41.351 | 370 | 195 | 6 | 5 | 369 | 27 | 379 | 1.66e-97 | 295 |
| MS.gene010553.t1 | AT4G36470 | 41.316 | 380 | 197 | 5 | 3 | 370 | 6 | 371 | 7.78e-96 | 290 |
| MS.gene010553.t1 | AT5G66430 | 39.945 | 363 | 207 | 4 | 9 | 369 | 1 | 354 | 5.41e-95 | 287 |
| MS.gene010553.t1 | AT5G04370 | 41.644 | 365 | 198 | 5 | 7 | 369 | 39 | 390 | 1.24e-94 | 288 |
| MS.gene010553.t1 | AT5G04370 | 41.644 | 365 | 198 | 5 | 7 | 369 | 58 | 409 | 2.13e-94 | 288 |
| MS.gene010553.t1 | AT5G04370 | 41.644 | 365 | 198 | 5 | 7 | 369 | 44 | 395 | 3.00e-94 | 287 |
| MS.gene010553.t1 | AT1G19640 | 44.837 | 368 | 182 | 7 | 1 | 348 | 1 | 367 | 2.54e-93 | 285 |
| MS.gene010553.t1 | AT5G38020 | 41.667 | 372 | 203 | 7 | 6 | 369 | 3 | 368 | 6.53e-91 | 278 |
| MS.gene010553.t1 | AT5G04380 | 39.295 | 369 | 205 | 5 | 6 | 369 | 35 | 389 | 1.49e-90 | 277 |
| MS.gene010553.t1 | AT3G21950 | 40.054 | 372 | 209 | 6 | 6 | 369 | 3 | 368 | 1.02e-89 | 275 |
| MS.gene010553.t1 | AT5G04380 | 39.024 | 369 | 199 | 6 | 6 | 369 | 31 | 378 | 1.23e-86 | 267 |
| MS.gene010553.t1 | AT2G14060 | 39.566 | 369 | 211 | 6 | 6 | 369 | 11 | 372 | 1.95e-85 | 264 |
| MS.gene010553.t1 | AT3G21950 | 36.634 | 404 | 210 | 7 | 6 | 369 | 3 | 400 | 7.35e-83 | 258 |
| MS.gene010553.t1 | AT5G04380 | 39.009 | 323 | 185 | 3 | 48 | 369 | 7 | 318 | 1.73e-82 | 254 |
| MS.gene010553.t1 | AT5G38020 | 41.033 | 329 | 181 | 6 | 48 | 369 | 7 | 329 | 2.12e-80 | 249 |
| MS.gene010553.t1 | AT1G68040 | 36.111 | 360 | 191 | 8 | 3 | 349 | 7 | 340 | 5.61e-65 | 211 |
| MS.gene010553.t1 | AT2G14060 | 42.544 | 228 | 127 | 2 | 6 | 232 | 11 | 235 | 2.52e-63 | 203 |
| MS.gene010553.t1 | AT5G55250 | 34.831 | 356 | 209 | 8 | 1 | 343 | 13 | 358 | 3.06e-59 | 196 |
| MS.gene010553.t1 | AT5G55250 | 34.375 | 320 | 187 | 8 | 37 | 343 | 11 | 320 | 1.53e-50 | 172 |
| MS.gene010553.t1 | AT5G38100 | 34.153 | 366 | 194 | 10 | 9 | 359 | 10 | 343 | 1.75e-50 | 173 |
| MS.gene010553.t1 | AT5G37990 | 33.884 | 363 | 192 | 13 | 5 | 348 | 6 | 339 | 9.80e-50 | 171 |
| MS.gene010553.t1 | AT5G37970 | 32.976 | 373 | 200 | 12 | 5 | 359 | 6 | 346 | 2.62e-49 | 170 |
| MS.gene010553.t1 | AT5G38100 | 35.535 | 318 | 161 | 9 | 54 | 359 | 35 | 320 | 2.19e-48 | 167 |
| MS.gene010553.t1 | AT4G26420 | 34.530 | 362 | 199 | 13 | 3 | 344 | 7 | 350 | 3.22e-48 | 167 |
| MS.gene010553.t1 | AT1G15125 | 33.238 | 349 | 191 | 12 | 9 | 344 | 1 | 320 | 4.47e-48 | 166 |
| MS.gene010553.t1 | AT5G56300 | 30.618 | 356 | 220 | 8 | 3 | 344 | 18 | 360 | 4.26e-47 | 165 |
| MS.gene010553.t1 | AT5G38780 | 32.597 | 362 | 197 | 11 | 5 | 348 | 6 | 338 | 1.42e-45 | 160 |
| MS.gene010553.t1 | AT5G38780 | 33.333 | 309 | 163 | 9 | 54 | 348 | 10 | 289 | 5.56e-43 | 152 |
| MS.gene010553.t1 | AT3G44840 | 30.882 | 340 | 200 | 8 | 9 | 341 | 7 | 318 | 1.08e-40 | 147 |
| MS.gene010553.t1 | AT4G26420 | 39.474 | 228 | 120 | 8 | 3 | 220 | 7 | 226 | 8.87e-39 | 139 |
| MS.gene010553.t1 | AT1G66720 | 31.834 | 289 | 169 | 8 | 9 | 284 | 9 | 282 | 2.06e-37 | 138 |
| MS.gene010553.t1 | AT3G44860 | 33.451 | 284 | 168 | 6 | 9 | 284 | 7 | 277 | 3.54e-37 | 137 |
| MS.gene010553.t1 | AT1G66700 | 31.724 | 290 | 168 | 9 | 9 | 284 | 9 | 282 | 2.14e-36 | 135 |
| MS.gene010553.t1 | AT3G44870 | 32.095 | 296 | 153 | 8 | 9 | 284 | 7 | 274 | 2.44e-36 | 136 |
| MS.gene010553.t1 | AT4G26420 | 39.189 | 222 | 117 | 8 | 9 | 220 | 1 | 214 | 2.71e-36 | 133 |
| MS.gene010553.t1 | AT1G66690 | 30.519 | 308 | 164 | 9 | 1 | 284 | 1 | 282 | 2.79e-34 | 130 |
| MS.gene010553.t1 | AT5G38100 | 37.788 | 217 | 113 | 5 | 9 | 213 | 10 | 216 | 1.07e-32 | 123 |
| MS.gene010553.t1 | AT5G38100 | 37.788 | 217 | 113 | 5 | 9 | 213 | 10 | 216 | 1.30e-32 | 122 |
| MS.gene010553.t1 | AT1G15125 | 33.071 | 254 | 143 | 9 | 9 | 249 | 1 | 240 | 2.95e-32 | 122 |
| MS.gene010553.t1 | AT1G66700 | 34.722 | 216 | 116 | 7 | 9 | 213 | 9 | 210 | 2.33e-30 | 117 |
Find 66 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAGAATGTTGCTATATT+TGG | 0.110287 | 5.1:+12193527 | MS.gene010553:CDS |
| GCAGATTTGGGTTGTTCTTC+TGG | 0.117703 | 5.1:+12190290 | MS.gene010553:CDS |
| TCGTATGGTTATGACAATTT+TGG | 0.163170 | 5.1:+12193480 | MS.gene010553:CDS |
| TTCATAAAGACTTGGTATTC+TGG | 0.227518 | 5.1:-12190389 | None:intergenic |
| GAGACTCATGATTATGTTCT+TGG | 0.236428 | 5.1:-12190367 | None:intergenic |
| AAGGCTAGGTATTGCAGATT+TGG | 0.245681 | 5.1:+12190277 | MS.gene010553:CDS |
| TTATTATTCTCTACACCTTT+AGG | 0.268964 | 5.1:-12193337 | None:intergenic |
| CAGATTTGGGTTGTTCTTCT+GGG | 0.282637 | 5.1:+12190291 | MS.gene010553:CDS |
| TTTGCAGTAGAGGTTCTTTA+TGG | 0.293086 | 5.1:-12190243 | None:intergenic |
| TAAAGGTGTAGAGAATAATA+AGG | 0.308607 | 5.1:+12193339 | MS.gene010553:CDS |
| TTCAAATAACTCCTTACTTC+AGG | 0.317836 | 5.1:+12189993 | MS.gene010553:CDS |
| TTTAGTTGATCGCATGTCTA+AGG | 0.320683 | 5.1:+12194264 | MS.gene010553:CDS |
| ACTGCAAAACGTTCCCAAAA+AGG | 0.332500 | 5.1:+12190258 | MS.gene010553:CDS |
| ATTGGAATGCTTATAATGAT+TGG | 0.336728 | 5.1:+12194089 | MS.gene010553:CDS |
| TCCATCAGAAGTAAAATTAG+AGG | 0.338597 | 5.1:+12194015 | MS.gene010553:CDS |
| CAAAGAATGTTGCTATATTT+GGG | 0.351384 | 5.1:+12193528 | MS.gene010553:CDS |
| TAAGCGTTGAGCACGTTTGC+GGG | 0.354155 | 5.1:-12193388 | None:intergenic |
| AGGCTAGGTATTGCAGATTT+GGG | 0.357011 | 5.1:+12190278 | MS.gene010553:CDS |
| CTCCACATGAATGGAGGAAT+TGG | 0.364990 | 5.1:+12189958 | MS.gene010553:CDS |
| GATATCACAAACAAAGTGTT+TGG | 0.381129 | 5.1:-12190314 | None:intergenic |
| GGCTGTGGCTGAACCTTTGT+TGG | 0.389884 | 5.1:+12194186 | MS.gene010553:CDS |
| GGACTTGTAGGGAATTATAA+TGG | 0.390523 | 5.1:+12193949 | MS.gene010553:intron |
| CCTTTGTTGGTCAGTCACTT+TGG | 0.420436 | 5.1:+12194199 | MS.gene010553:CDS |
| TTATCTAAACCACTCATTGA+TGG | 0.421483 | 5.1:+12194136 | MS.gene010553:CDS |
| TGCACTTAATGACATGGTCT+TGG | 0.426789 | 5.1:+12193564 | MS.gene010553:CDS |
| AATTATAATGGAGGAGCAAA+TGG | 0.437256 | 5.1:+12193961 | MS.gene010553:CDS |
| TATCTAAACCACTCATTGAT+GGG | 0.456081 | 5.1:+12194137 | MS.gene010553:CDS |
| ATTCCTCTTACAGCCTTCAA+TGG | 0.459080 | 5.1:+12190576 | MS.gene010553:CDS |
| GTGATTAATTAGGTTCCTAA+AGG | 0.473857 | 5.1:+12193322 | MS.gene010553:intron |
| GTCATTCACTATTGATCGTA+TGG | 0.475509 | 5.1:+12194051 | MS.gene010553:CDS |
| GTAAGCGTTGAGCACGTTTG+CGG | 0.483149 | 5.1:-12193389 | None:intergenic |
| GTCTTTATGAATGATCTTCA+AGG | 0.483637 | 5.1:+12190401 | MS.gene010553:CDS |
| CTCCAATTCCTCCATTCATG+TGG | 0.487182 | 5.1:-12189960 | None:intergenic |
| AAAGGTGTAGAGAATAATAA+GGG | 0.504329 | 5.1:+12193340 | MS.gene010553:CDS |
| ACTTAATGACATGGTCTTGG+AGG | 0.509131 | 5.1:+12193567 | MS.gene010553:CDS |
| AAACTAAATGATGAAGTTGA+AGG | 0.511623 | 5.1:+12190470 | MS.gene010553:CDS |
| TTACCTGTGAGAGCCATTGA+AGG | 0.518107 | 5.1:-12190589 | None:intergenic |
| AATCTCTTTGAAATTGCTCA+TGG | 0.518585 | 5.1:-12193411 | None:intergenic |
| GATGAAGTTGAAGGTGGGAT+TGG | 0.523981 | 5.1:+12190479 | MS.gene010553:CDS |
| GTGCAGAAGAACTTGTTGAC+GGG | 0.527202 | 5.1:+12193455 | MS.gene010553:CDS |
| TGCCGTTGCACTTAATGACA+TGG | 0.530148 | 5.1:+12193558 | MS.gene010553:CDS |
| GAACAAGTACTCCACATGAA+TGG | 0.537606 | 5.1:+12189949 | MS.gene010553:CDS |
| CTAAATGATGAAGTTGAAGG+TGG | 0.544774 | 5.1:+12190473 | MS.gene010553:CDS |
| GAGAGAAACAAGGATGAAAG+TGG | 0.553371 | 5.1:+12189927 | None:intergenic |
| CAGCCTTCAATGGCTCTCAC+AGG | 0.553437 | 5.1:+12190586 | MS.gene010553:CDS |
| GAGCCATTGAAGGCTGTAAG+AGG | 0.561556 | 5.1:-12190579 | None:intergenic |
| GACCATGTCATTAAGTGCAA+CGG | 0.569570 | 5.1:-12193560 | None:intergenic |
| CACAAAATGCATGAGGGCTG+TGG | 0.572332 | 5.1:+12194171 | MS.gene010553:CDS |
| TAAATGATGAAGTTGAAGGT+GGG | 0.578488 | 5.1:+12190474 | MS.gene010553:CDS |
| TGGAGGTAACAAAAGTACAT+TGG | 0.585827 | 5.1:+12194071 | MS.gene010553:CDS |
| TCTTTATGAATGATCTTCAA+GGG | 0.587328 | 5.1:+12190402 | MS.gene010553:CDS |
| CCAAAGTGACTGACCAACAA+AGG | 0.591313 | 5.1:-12194199 | None:intergenic |
| CGTGCAGAAGAACTTGTTGA+CGG | 0.591341 | 5.1:+12193454 | MS.gene010553:CDS |
| AAGCGTTGAGCACGTTTGCG+GGG | 0.596174 | 5.1:-12193387 | None:intergenic |
| GAAGATCATTCATAAAGACT+TGG | 0.599401 | 5.1:-12190397 | None:intergenic |
| ATCTAAACCACTCATTGATG+GGG | 0.600535 | 5.1:+12194138 | MS.gene010553:CDS |
| TAATAAGGGTAACATTTACA+TGG | 0.606370 | 5.1:+12193354 | MS.gene010553:CDS |
| TGCAGAAGAACTTGTTGACG+GGG | 0.630200 | 5.1:+12193456 | MS.gene010553:CDS |
| ACAATGTCACAAAATGCATG+AGG | 0.638571 | 5.1:+12194164 | MS.gene010553:CDS |
| TTGTATGCCCCATCAATGAG+TGG | 0.641457 | 5.1:-12194145 | None:intergenic |
| CAAGTACTCCACATGAATGG+AGG | 0.643109 | 5.1:+12189952 | MS.gene010553:CDS |
| CTTGTAGGGAATTATAATGG+AGG | 0.653703 | 5.1:+12193952 | MS.gene010553:intron |
| CAATGTCACAAAATGCATGA+GGG | 0.658939 | 5.1:+12194165 | MS.gene010553:CDS |
| ATTCACTATTGATCGTATGG+AGG | 0.679848 | 5.1:+12194054 | MS.gene010553:CDS |
| GATGGAGATGGTGTGTACTG+AGG | 0.725953 | 5.1:-12193998 | None:intergenic |
| GCAGAAGAACTTGTTGACGG+GGG | 0.729596 | 5.1:+12193457 | MS.gene010553:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATAATAATTTAAT+TGG | + | chr5.1:12192770-12192789 | MS.gene010553:intron | 0.0% |
| !! | AAAAAGAAATTATATTATGT+TGG | + | chr5.1:12191758-12191777 | MS.gene010553:intron | 10.0% |
| !!! | AAATTATTTTGTATAACATT+TGG | - | chr5.1:12192295-12192314 | None:intergenic | 10.0% |
| !!! | ACAACTATTTTAATTTTTTT+AGG | - | chr5.1:12190721-12190740 | None:intergenic | 10.0% |
| !!! | AGTTTTTATTAATAAAAGAT+AGG | - | chr5.1:12191214-12191233 | None:intergenic | 10.0% |
| !!! | ATTTTTTAATGATTGTTTAT+AGG | + | chr5.1:12190998-12191017 | MS.gene010553:intron | 10.0% |
| !!! | TAAAATAATTGTTATTTGTT+TGG | + | chr5.1:12193300-12193319 | MS.gene010553:intron | 10.0% |
| !!! | TGACATTTTTTTTTTTTTTT+GGG | - | chr5.1:12190044-12190063 | None:intergenic | 10.0% |
| !!! | TTTTTTAATGATTGTTTATA+GGG | + | chr5.1:12190999-12191018 | MS.gene010553:intron | 10.0% |
| !!! | TTTTTTTATACTTAATAGTT+GGG | - | chr5.1:12192141-12192160 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATACTTAATAGT+TGG | - | chr5.1:12192142-12192161 | None:intergenic | 10.0% |
| !! | AAAAAATTGACAAAAAAAAG+AGG | - | chr5.1:12192588-12192607 | None:intergenic | 15.0% |
| !! | AAAAATTGACAAAAAAAAGA+GGG | - | chr5.1:12192587-12192606 | None:intergenic | 15.0% |
| !! | ATAGATATAATTTCTTGTAA+AGG | + | chr5.1:12193905-12193924 | MS.gene010553:intron | 15.0% |
| !! | CTTAGAGTAAATATATAATT+TGG | + | chr5.1:12192113-12192132 | MS.gene010553:intron | 15.0% |
| !! | TAATAAAAGATAGTGTATTA+TGG | - | chr5.1:12191205-12191224 | None:intergenic | 15.0% |
| !! | TTAACAAAATAGTATTTCAA+TGG | + | chr5.1:12193011-12193030 | MS.gene010553:intron | 15.0% |
| !! | TTATTAATAAAAACTCACAT+GGG | + | chr5.1:12191219-12191238 | MS.gene010553:intron | 15.0% |
| !! | TTTATTAATAAAAACTCACA+TGG | + | chr5.1:12191218-12191237 | MS.gene010553:intron | 15.0% |
| !!! | ATTTTATATGGTATAGAAAA+AGG | + | chr5.1:12190187-12190206 | MS.gene010553:intron | 15.0% |
| !!! | GTGACATTTTTTTTTTTTTT+TGG | - | chr5.1:12190045-12190064 | None:intergenic | 15.0% |
| !!! | TGTCAATTTTTTTATTATAG+AGG | + | chr5.1:12192596-12192615 | MS.gene010553:intron | 15.0% |
| !!! | TTTAATTTTTTTAGGTCAAT+TGG | - | chr5.1:12190713-12190732 | None:intergenic | 15.0% |
| !!! | TTTTTTATACTTAATAGTTG+GGG | - | chr5.1:12192140-12192159 | None:intergenic | 15.0% |
| !! | AAAAAAAAATACTTTACAGG+AGG | - | chr5.1:12191067-12191086 | None:intergenic | 20.0% |
| !! | AAAAAAAATACTTTACAGGA+GGG | - | chr5.1:12191066-12191085 | None:intergenic | 20.0% |
| !! | AAAAAAAATCTCACTAAAAG+CGG | + | chr5.1:12191850-12191869 | MS.gene010553:intron | 20.0% |
| !! | CAAAAATGAAATAGTGAATT+TGG | - | chr5.1:12192660-12192679 | None:intergenic | 20.0% |
| !! | CATCAAAATATCAACATAAA+TGG | - | chr5.1:12192819-12192838 | None:intergenic | 20.0% |
| !! | GAGCAAATTATCAATTTATA+AGG | + | chr5.1:12193613-12193632 | MS.gene010553:intron | 20.0% |
| !! | TCCAAAAAAAAATACTTTAC+AGG | - | chr5.1:12191070-12191089 | None:intergenic | 20.0% |
| !! | TTCTAGATTAATGATATGTT+TGG | - | chr5.1:12192417-12192436 | None:intergenic | 20.0% |
| !! | TTTCAAACATATCATTAATC+TGG | - | chr5.1:12192051-12192070 | None:intergenic | 20.0% |
| !!! | AAATCTTTTAAGATAACGAT+AGG | - | chr5.1:12190619-12190638 | None:intergenic | 20.0% |
| !!! | ATATAGATAACTGCTTTTTT+GGG | + | chr5.1:12190847-12190866 | MS.gene010553:intron | 20.0% |
| !!! | ATGATTTCAACAACATTTTT+AGG | + | chr5.1:12190426-12190445 | MS.gene010553:CDS | 20.0% |
| !!! | CAAATTCACTATTTCATTTT+TGG | + | chr5.1:12192658-12192677 | MS.gene010553:intron | 20.0% |
| !!! | CTTGTAATTTGAAGATTTTT+CGG | + | chr5.1:12191097-12191116 | MS.gene010553:intron | 20.0% |
| !!! | GAGTATTTTATAAACTTGTT+TGG | + | chr5.1:12193660-12193679 | MS.gene010553:intron | 20.0% |
| !!! | TATTTGTTTGGTGATTAATT+AGG | + | chr5.1:12193312-12193331 | MS.gene010553:intron | 20.0% |
| !!! | TCCTGTAAAGTATTTTTTTT+TGG | + | chr5.1:12191066-12191085 | MS.gene010553:intron | 20.0% |
| !!! | TTATTATAGAGGACAATTTT+TGG | + | chr5.1:12192607-12192626 | MS.gene010553:intron | 20.0% |
| ! | AAACTAAATGATGAAGTTGA+AGG | + | chr5.1:12190470-12190489 | MS.gene010553:CDS | 25.0% |
| ! | AAAGTAATGAGCTATACTAT+TGG | - | chr5.1:12193156-12193175 | None:intergenic | 25.0% |
| ! | AACACCAAACATTGTTTATT+TGG | - | chr5.1:12192796-12192815 | None:intergenic | 25.0% |
| ! | AAGTAATGAGCTATACTATT+GGG | - | chr5.1:12193155-12193174 | None:intergenic | 25.0% |
| ! | AATGGAGAATAACAAAGATA+CGG | + | chr5.1:12193029-12193048 | MS.gene010553:intron | 25.0% |
| ! | ATTGGAATGCTTATAATGAT+TGG | + | chr5.1:12194089-12194108 | MS.gene010553:CDS | 25.0% |
| ! | CAAAGAATGTTGCTATATTT+GGG | + | chr5.1:12193528-12193547 | MS.gene010553:CDS | 25.0% |
| ! | CGAAAAATCTTCAAATTACA+AGG | - | chr5.1:12191099-12191118 | None:intergenic | 25.0% |
| ! | TAAAATCTATGTTCTTGTTG+CGG | - | chr5.1:12191927-12191946 | None:intergenic | 25.0% |
| ! | TAATAAGGGTAACATTTACA+TGG | + | chr5.1:12193354-12193373 | MS.gene010553:CDS | 25.0% |
| ! | TAGTCATAATACAATGTAGT+CGG | - | chr5.1:12191453-12191472 | None:intergenic | 25.0% |
| ! | TAGTCATAATACAATGTAGT+TGG | - | chr5.1:12191453-12191472 | None:intergenic | 25.0% |
| ! | TCTTTATGAATGATCTTCAA+GGG | + | chr5.1:12190402-12190421 | MS.gene010553:CDS | 25.0% |
| ! | TGAGTGATGATAAACAAATA+AGG | - | chr5.1:12191356-12191375 | None:intergenic | 25.0% |
| ! | TTATTATTCTCTACACCTTT+AGG | - | chr5.1:12193340-12193359 | None:intergenic | 25.0% |
| !! | AAAGGTGTAGAGAATAATAA+GGG | + | chr5.1:12193340-12193359 | MS.gene010553:CDS | 25.0% |
| !! | ACAATTTTCATGACAAAGAT+CGG | + | chr5.1:12191877-12191896 | MS.gene010553:intron | 25.0% |
| !! | ATTACCCTACAAAAAGTTTT+AGG | + | chr5.1:12190952-12190971 | MS.gene010553:intron | 25.0% |
| !! | ATTGGTCAAATCTTTTTCTA+TGG | + | chr5.1:12190497-12190516 | MS.gene010553:CDS | 25.0% |
| !! | CAAGAATTTGATAATTGCAT+AGG | - | chr5.1:12190891-12190910 | None:intergenic | 25.0% |
| !! | CATTAAAATACTTTTCACGA+AGG | - | chr5.1:12191130-12191149 | None:intergenic | 25.0% |
| !! | CTTACGATGAAGATTTTATA+TGG | + | chr5.1:12190175-12190194 | MS.gene010553:intron | 25.0% |
| !! | GCTATTATTGAAGAAGTTTT+TGG | + | chr5.1:12194226-12194245 | MS.gene010553:CDS | 25.0% |
| !! | GTTAATGTCATTTATCATGT+TGG | - | chr5.1:12193063-12193082 | None:intergenic | 25.0% |
| !! | TAAAGGTGTAGAGAATAATA+AGG | + | chr5.1:12193339-12193358 | MS.gene010553:CDS | 25.0% |
| !!! | ATGAAATGCATTGTTTTTGT+TGG | - | chr5.1:12190554-12190573 | None:intergenic | 25.0% |
| !!! | GATATAGATAACTGCTTTTT+TGG | + | chr5.1:12190846-12190865 | MS.gene010553:intron | 25.0% |
| AAAACCGGAAATGATCTATA+TGG | - | chr5.1:12191043-12191062 | None:intergenic | 30.0% | |
| AAACCGGAAATGATCTATAT+GGG | - | chr5.1:12191042-12191061 | None:intergenic | 30.0% | |
| AGTTGTGGCATTAACTAATT+CGG | - | chr5.1:12192695-12192714 | None:intergenic | 30.0% | |
| GAAGATCATTCATAAAGACT+TGG | - | chr5.1:12190400-12190419 | None:intergenic | 30.0% | |
| GCAAAGAATGTTGCTATATT+TGG | + | chr5.1:12193527-12193546 | MS.gene010553:CDS | 30.0% | |
| GTCTTTATGAATGATCTTCA+AGG | + | chr5.1:12190401-12190420 | MS.gene010553:CDS | 30.0% | |
| GTGATTAATTAGGTTCCTAA+AGG | + | chr5.1:12193322-12193341 | MS.gene010553:intron | 30.0% | |
| GTGTTTAGCAATAAGCTTAT+TGG | + | chr5.1:12193693-12193712 | MS.gene010553:intron | 30.0% | |
| TAAATGATGAAGTTGAAGGT+GGG | + | chr5.1:12190474-12190493 | MS.gene010553:CDS | 30.0% | |
| TACATGTTAACTTAACCGTA+AGG | - | chr5.1:12190979-12190998 | None:intergenic | 30.0% | |
| TATCTAAACCACTCATTGAT+GGG | + | chr5.1:12194137-12194156 | MS.gene010553:CDS | 30.0% | |
| TCCATCAGAAGTAAAATTAG+AGG | + | chr5.1:12194015-12194034 | MS.gene010553:CDS | 30.0% | |
| TGTTAACAGTTACTTGACTA+TGG | - | chr5.1:12192997-12193016 | None:intergenic | 30.0% | |
| TTATCTAAACCACTCATTGA+TGG | + | chr5.1:12194136-12194155 | MS.gene010553:CDS | 30.0% | |
| TTCAAATAACTCCTTACTTC+AGG | + | chr5.1:12189993-12190012 | MS.gene010553:CDS | 30.0% | |
| TTGGCCAAATAAACAATGTT+TGG | + | chr5.1:12192789-12192808 | MS.gene010553:intron | 30.0% | |
| ! | AAGGACCTAAAACTTTTTGT+AGG | - | chr5.1:12190960-12190979 | None:intergenic | 30.0% |
| ! | AATGTAGTTGGTATTAGTCA+TGG | - | chr5.1:12191441-12191460 | None:intergenic | 30.0% |
| ! | AATTATAATGGAGGAGCAAA+TGG | + | chr5.1:12193961-12193980 | MS.gene010553:CDS | 30.0% |
| ! | AATTTTACTTCTGATGGAGA+TGG | - | chr5.1:12194013-12194032 | None:intergenic | 30.0% |
| ! | ACCTCTAATTTTACTTCTGA+TGG | - | chr5.1:12194019-12194038 | None:intergenic | 30.0% |
| ! | AGGACCTAAAACTTTTTGTA+GGG | - | chr5.1:12190959-12190978 | None:intergenic | 30.0% |
| ! | CGTATGGTTATGACAATTTT+GGG | + | chr5.1:12193481-12193500 | MS.gene010553:CDS | 30.0% |
| ! | GATATCACAAACAAAGTGTT+TGG | - | chr5.1:12190317-12190336 | None:intergenic | 30.0% |
| ! | GATATGTTTGGAACTATGTT+TGG | - | chr5.1:12192405-12192424 | None:intergenic | 30.0% |
| ! | GTGATATTTTACCTGAAGTA+AGG | - | chr5.1:12190007-12190026 | None:intergenic | 30.0% |
| ! | TCGTATGGTTATGACAATTT+TGG | + | chr5.1:12193480-12193499 | MS.gene010553:CDS | 30.0% |
| ! | TTCATAAAGACTTGGTATTC+TGG | - | chr5.1:12190392-12190411 | None:intergenic | 30.0% |
| !! | AATCTCTTTGAAATTGCTCA+TGG | - | chr5.1:12193414-12193433 | None:intergenic | 30.0% |
| !!! | AAATTAGAGGTTTTGAGAGA+AGG | + | chr5.1:12194028-12194047 | MS.gene010553:CDS | 30.0% |
| !!! | AATTAGAGGTTTTGAGAGAA+GGG | + | chr5.1:12194029-12194048 | MS.gene010553:CDS | 30.0% |
| !!! | CAAAAAGTTTTAGGTCCTTA+CGG | + | chr5.1:12190961-12190980 | MS.gene010553:intron | 30.0% |
| AAACATAGTTCCAAGACGTT+AGG | + | chr5.1:12192460-12192479 | MS.gene010553:intron | 35.0% | |
| AACCGGAAATGATCTATATG+GGG | - | chr5.1:12191041-12191060 | None:intergenic | 35.0% | |
| AATGTAGTCGGTATTAGTCA+TGG | - | chr5.1:12191719-12191738 | None:intergenic | 35.0% | |
| ACAATGTCACAAAATGCATG+AGG | + | chr5.1:12194164-12194183 | MS.gene010553:CDS | 35.0% | |
| AGAATAACAAAGATACGGCT+AGG | + | chr5.1:12193034-12193053 | MS.gene010553:intron | 35.0% | |
| AGGGTATAAATAACCTGAAG+TGG | - | chr5.1:12192568-12192587 | None:intergenic | 35.0% | |
| ATCTAAACCACTCATTGATG+GGG | + | chr5.1:12194138-12194157 | MS.gene010553:CDS | 35.0% | |
| ATGTGGGGACCATATAAATT+TGG | - | chr5.1:12191528-12191547 | None:intergenic | 35.0% | |
| ATGTGGGGTCCATATAAATT+TGG | - | chr5.1:12191250-12191269 | None:intergenic | 35.0% | |
| ATTCACTATTGATCGTATGG+AGG | + | chr5.1:12194054-12194073 | MS.gene010553:CDS | 35.0% | |
| CAAAATCTCATAAACGAGTC+GGG | - | chr5.1:12192089-12192108 | None:intergenic | 35.0% | |
| CAATGTCACAAAATGCATGA+GGG | + | chr5.1:12194165-12194184 | MS.gene010553:CDS | 35.0% | |
| CCAAAATCTCATAAACGAGT+CGG | - | chr5.1:12192090-12192109 | None:intergenic | 35.0% | |
| CTAAATGATGAAGTTGAAGG+TGG | + | chr5.1:12190473-12190492 | MS.gene010553:CDS | 35.0% | |
| CTTGTAGGGAATTATAATGG+AGG | + | chr5.1:12193952-12193971 | MS.gene010553:intron | 35.0% | |
| GAATAACAAAGATACGGCTA+GGG | + | chr5.1:12193035-12193054 | MS.gene010553:intron | 35.0% | |
| GAGACTCATGATTATGTTCT+TGG | - | chr5.1:12190370-12190389 | None:intergenic | 35.0% | |
| GGACTTGTAGGGAATTATAA+TGG | + | chr5.1:12193949-12193968 | MS.gene010553:intron | 35.0% | |
| GTCATTCACTATTGATCGTA+TGG | + | chr5.1:12194051-12194070 | MS.gene010553:CDS | 35.0% | |
| TAACGTCTTGGAACTATGTT+TGG | - | chr5.1:12192461-12192480 | None:intergenic | 35.0% | |
| TATATGGACCCCACATAATT+GGG | + | chr5.1:12191254-12191273 | MS.gene010553:intron | 35.0% | |
| TATATGGTCCCCACATAATT+TGG | + | chr5.1:12191532-12191551 | MS.gene010553:intron | 35.0% | |
| TCGGTCATCAACAAAATCAA+TGG | + | chr5.1:12191896-12191915 | MS.gene010553:intron | 35.0% | |
| TGATCGGTTAAAATTCACGT+GGG | - | chr5.1:12191563-12191582 | None:intergenic | 35.0% | |
| TTATATGGACCCCACATAAT+TGG | + | chr5.1:12191253-12191272 | MS.gene010553:intron | 35.0% | |
| TTGATCGGTTAAAATTCACG+TGG | - | chr5.1:12191564-12191583 | None:intergenic | 35.0% | |
| TTTAGTTGATCGCATGTCTA+AGG | + | chr5.1:12194264-12194283 | MS.gene010553:CDS | 35.0% | |
| TTTGCAGTAGAGGTTCTTTA+TGG | - | chr5.1:12190246-12190265 | None:intergenic | 35.0% | |
| ! | AATGAAAGGTTAGTTCTCAG+TGG | - | chr5.1:12193830-12193849 | None:intergenic | 35.0% |
| ! | ACTCGTTTATGAGATTTTGG+TGG | + | chr5.1:12192090-12192109 | MS.gene010553:intron | 35.0% |
| ! | TGCAACACACTCTTTTTGAT+CGG | - | chr5.1:12191301-12191320 | None:intergenic | 35.0% |
| ! | TGCGTTAGTGATGTTTCTTT+TGG | + | chr5.1:12192865-12192884 | MS.gene010553:intron | 35.0% |
| ! | TGGAGGTAACAAAAGTACAT+TGG | + | chr5.1:12194071-12194090 | MS.gene010553:CDS | 35.0% |
| !! | GCAACACATAATTTGAGTTG+TGG | - | chr5.1:12192710-12192729 | None:intergenic | 35.0% |
| !! | GGTAGTTTACTCTTGCTTTT+GGG | - | chr5.1:12192922-12192941 | None:intergenic | 35.0% |
| AAAACGTTCCCAAAAAGGCT+AGG | + | chr5.1:12190263-12190282 | MS.gene010553:CDS | 40.0% | |
| AACAAATACGACACCACTTC+AGG | + | chr5.1:12192552-12192571 | MS.gene010553:intron | 40.0% | |
| ACCGGAAATGATCTATATGG+GGG | - | chr5.1:12191040-12191059 | None:intergenic | 40.0% | |
| ACTGCAAAACGTTCCCAAAA+AGG | + | chr5.1:12190258-12190277 | MS.gene010553:CDS | 40.0% | |
| ATCCTGCCATAAAAAGAACC+AGG | - | chr5.1:12190527-12190546 | None:intergenic | 40.0% | |
| ATTCCTCTTACAGCCTTCAA+TGG | + | chr5.1:12190576-12190595 | MS.gene010553:CDS | 40.0% | |
| GAACAAGTACTCCACATGAA+TGG | + | chr5.1:12189949-12189968 | MS.gene010553:CDS | 40.0% | |
| GACCATGTCATTAAGTGCAA+CGG | - | chr5.1:12193563-12193582 | None:intergenic | 40.0% | |
| GGAACTATGTTTGGTTAACG+TGG | - | chr5.1:12192396-12192415 | None:intergenic | 40.0% | |
| GGGGACCATATAAATTTGGT+GGG | - | chr5.1:12191524-12191543 | None:intergenic | 40.0% | |
| GGGGTCCATATAAATTTGGT+GGG | - | chr5.1:12191246-12191265 | None:intergenic | 40.0% | |
| TACTTTACAGGAGGGAAAAC+CGG | - | chr5.1:12191058-12191077 | None:intergenic | 40.0% | |
| TGAGTCTCACCCAATTATGT+GGG | - | chr5.1:12191266-12191285 | None:intergenic | 40.0% | |
| TGCACTTAATGACATGGTCT+TGG | + | chr5.1:12193564-12193583 | MS.gene010553:CDS | 40.0% | |
| TGGGGACCATATAAATTTGG+TGG | - | chr5.1:12191525-12191544 | None:intergenic | 40.0% | |
| TGGGGTCCATATAAATTTGG+TGG | - | chr5.1:12191247-12191266 | None:intergenic | 40.0% | |
| TGGGTCCCACCAAATTTATA+TGG | + | chr5.1:12191238-12191257 | MS.gene010553:intron | 40.0% | |
| TGGGTCTCACCAAATTATGT+GGG | - | chr5.1:12191544-12191563 | None:intergenic | 40.0% | |
| TTGGTATTAGTCATGGTGCA+GGG | - | chr5.1:12191434-12191453 | None:intergenic | 40.0% | |
| ! | AACTAGTTTGCCTAACGTCT+TGG | - | chr5.1:12192473-12192492 | None:intergenic | 40.0% |
| ! | AAGGCTAGGTATTGCAGATT+TGG | + | chr5.1:12190277-12190296 | MS.gene010553:CDS | 40.0% |
| ! | ACTTAATGACATGGTCTTGG+AGG | + | chr5.1:12193567-12193586 | MS.gene010553:CDS | 40.0% |
| ! | AGGCTAGGTATTGCAGATTT+GGG | + | chr5.1:12190278-12190297 | MS.gene010553:CDS | 40.0% |
| ! | GGGTAGTTTACTCTTGCTTT+TGG | - | chr5.1:12192923-12192942 | None:intergenic | 40.0% |
| !! | CAGATTTGGGTTGTTCTTCT+GGG | + | chr5.1:12190291-12190310 | MS.gene010553:CDS | 40.0% |
| !! | CCGACTCGTTTATGAGATTT+TGG | + | chr5.1:12192087-12192106 | MS.gene010553:intron | 40.0% |
| !! | CTGCAATACCTAGCCTTTTT+GGG | - | chr5.1:12190274-12190293 | None:intergenic | 40.0% |
| !! | TCTGCAATACCTAGCCTTTT+TGG | - | chr5.1:12190275-12190294 | None:intergenic | 40.0% |
| CAAGTACTCCACATGAATGG+AGG | + | chr5.1:12189952-12189971 | MS.gene010553:CDS | 45.0% | |
| CCAAAGTGACTGACCAACAA+AGG | - | chr5.1:12194202-12194221 | None:intergenic | 45.0% | |
| CCCCCCATATAGATCATTTC+CGG | + | chr5.1:12191036-12191055 | MS.gene010553:intron | 45.0% | |
| CCGGAAATGATCTATATGGG+GGG | - | chr5.1:12191039-12191058 | None:intergenic | 45.0% | |
| CCTTTGTTGGTCAGTCACTT+TGG | + | chr5.1:12194199-12194218 | MS.gene010553:CDS | 45.0% | |
| CTCCAATTCCTCCATTCATG+TGG | - | chr5.1:12189963-12189982 | None:intergenic | 45.0% | |
| CTCCACATGAATGGAGGAAT+TGG | + | chr5.1:12189958-12189977 | MS.gene010553:CDS | 45.0% | |
| GAGTCTCACCCAATTATGTG+GGG | - | chr5.1:12191265-12191284 | None:intergenic | 45.0% | |
| GATGAAGTTGAAGGTGGGAT+TGG | + | chr5.1:12190479-12190498 | MS.gene010553:CDS | 45.0% | |
| GGGTCTCACCAAATTATGTG+GGG | - | chr5.1:12191543-12191562 | None:intergenic | 45.0% | |
| GTGAGTCTCACCCAATTATG+TGG | - | chr5.1:12191267-12191286 | None:intergenic | 45.0% | |
| GTGGGTCTCACCAAATTATG+TGG | - | chr5.1:12191545-12191564 | None:intergenic | 45.0% | |
| GTTGGTATTAGTCATGGTGC+AGG | - | chr5.1:12191435-12191454 | None:intergenic | 45.0% | |
| TATTAGTCATGGTGCAGGGA+CGG | - | chr5.1:12191430-12191449 | None:intergenic | 45.0% | |
| TCGGTATTAGTCATGGTGCA+GGG | - | chr5.1:12191712-12191731 | None:intergenic | 45.0% | |
| TGCCGTTGCACTTAATGACA+TGG | + | chr5.1:12193558-12193577 | MS.gene010553:CDS | 45.0% | |
| TTACCTGTGAGAGCCATTGA+AGG | - | chr5.1:12190592-12190611 | None:intergenic | 45.0% | |
| TTGTATGCCCCATCAATGAG+TGG | - | chr5.1:12194148-12194167 | None:intergenic | 45.0% | |
| ! | ATCTTTTTCTATGGCGCTCC+TGG | + | chr5.1:12190506-12190525 | MS.gene010553:CDS | 45.0% |
| ! | TTCCAGTCTTATACGCACGT+TGG | + | chr5.1:12192491-12192510 | MS.gene010553:intron | 45.0% |
| ! | TTGGGAACGTTTTGCAGTAG+AGG | - | chr5.1:12190256-12190275 | None:intergenic | 45.0% |
| !! | CGTGCAGAAGAACTTGTTGA+CGG | + | chr5.1:12193454-12193473 | MS.gene010553:CDS | 45.0% |
| !! | CTCCTGGTTCTTTTTATGGC+AGG | + | chr5.1:12190522-12190541 | MS.gene010553:CDS | 45.0% |
| !! | GCAGATTTGGGTTGTTCTTC+TGG | + | chr5.1:12190290-12190309 | MS.gene010553:CDS | 45.0% |
| !! | GTGCAGAAGAACTTGTTGAC+GGG | + | chr5.1:12193455-12193474 | MS.gene010553:CDS | 45.0% |
| !! | TGCAGAAGAACTTGTTGACG+GGG | + | chr5.1:12193456-12193475 | MS.gene010553:CDS | 45.0% |
| !! | AAAAAAAAATCTTTATTATA+AGG | - | chr5.1:12192742-12192761 | None:intergenic | 5.0% |
| !! | AATATAAATTATAAAATGAA+AGG | - | chr5.1:12193844-12193863 | None:intergenic | 5.0% |
| !!! | AAACTATTTTTAATTTATAA+AGG | - | chr5.1:12193781-12193800 | None:intergenic | 5.0% |
| !!! | AACTATTTTTAATTTATAAA+GGG | - | chr5.1:12193780-12193799 | None:intergenic | 5.0% |
| AAGCTTTGCCTACCCTAACG+GGG | - | chr5.1:12192952-12192971 | None:intergenic | 50.0% | |
| ACTACCCAATTCACCCCGTT+AGG | + | chr5.1:12192936-12192955 | MS.gene010553:intron | 50.0% | |
| CAAGCTTTGCCTACCCTAAC+GGG | - | chr5.1:12192953-12192972 | None:intergenic | 50.0% | |
| CACAAAATGCATGAGGGCTG+TGG | + | chr5.1:12194171-12194190 | MS.gene010553:CDS | 50.0% | |
| CCAAGCTTTGCCTACCCTAA+CGG | - | chr5.1:12192954-12192973 | None:intergenic | 50.0% | |
| CTACCCAATTCACCCCGTTA+GGG | + | chr5.1:12192937-12192956 | MS.gene010553:intron | 50.0% | |
| CTACCCTAACGGGGTGAATT+GGG | - | chr5.1:12192943-12192962 | None:intergenic | 50.0% | |
| GAGCCATTGAAGGCTGTAAG+AGG | - | chr5.1:12190582-12190601 | None:intergenic | 50.0% | |
| GATGGAGATGGTGTGTACTG+AGG | - | chr5.1:12194001-12194020 | None:intergenic | 50.0% | |
| GTCGGTATTAGTCATGGTGC+AGG | - | chr5.1:12191713-12191732 | None:intergenic | 50.0% | |
| GTCTTATACGCACGTTGGCA+AGG | + | chr5.1:12192496-12192515 | MS.gene010553:intron | 50.0% | |
| TGCCAACGTGCGTATAAGAC+TGG | - | chr5.1:12192496-12192515 | None:intergenic | 50.0% | |
| !! | GCAGAAGAACTTGTTGACGG+GGG | + | chr5.1:12193457-12193476 | MS.gene010553:CDS | 50.0% |
| !! | GGCGCTCCTGGTTCTTTTTA+TGG | + | chr5.1:12190518-12190537 | MS.gene010553:CDS | 50.0% |
| !! | GTAAGCGTTGAGCACGTTTG+CGG | - | chr5.1:12193392-12193411 | None:intergenic | 50.0% |
| !! | TAAGCGTTGAGCACGTTTGC+GGG | - | chr5.1:12193391-12193410 | None:intergenic | 50.0% |
| CAGCCTTCAATGGCTCTCAC+AGG | + | chr5.1:12190586-12190605 | MS.gene010553:CDS | 55.0% | |
| CAGGGACGATTGTTGGACGT+TGG | - | chr5.1:12191694-12191713 | None:intergenic | 55.0% | |
| CATGGTGCAGGGACGATTGT+TGG | - | chr5.1:12191701-12191720 | None:intergenic | 55.0% | |
| CCAATTCACCCCGTTAGGGT+AGG | + | chr5.1:12192941-12192960 | MS.gene010553:intron | 55.0% | |
| CCGTTAGGGTAGGCAAAGCT+TGG | + | chr5.1:12192951-12192970 | MS.gene010553:intron | 55.0% | |
| CCTACCCTAACGGGGTGAAT+TGG | - | chr5.1:12192944-12192963 | None:intergenic | 55.0% | |
| GGCTGTGGCTGAACCTTTGT+TGG | + | chr5.1:12194186-12194205 | MS.gene010553:CDS | 55.0% | |
| ! | ACTTGTTGACGGGGGTCGTA+TGG | + | chr5.1:12193465-12193484 | MS.gene010553:CDS | 55.0% |
| !! | AAGCGTTGAGCACGTTTGCG+GGG | - | chr5.1:12193390-12193409 | None:intergenic | 55.0% |
| CATGGTGCAGGGACGGTTGT+GGG | - | chr5.1:12191423-12191442 | None:intergenic | 60.0% | |
| TCATGGTGCAGGGACGGTTG+TGG | - | chr5.1:12191424-12191443 | None:intergenic | 60.0% | |
| CAGGGACGGTTGTGGGACGT+TGG | - | chr5.1:12191416-12191435 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 12189940 | 12194336 | 12189940 | ID=MS.gene010553 |
| chr5.1 | mRNA | 12189940 | 12194336 | 12189940 | ID=MS.gene010553.t1;Parent=MS.gene010553 |
| chr5.1 | exon | 12189940 | 12190014 | 12189940 | ID=MS.gene010553.t1.exon1;Parent=MS.gene010553.t1 |
| chr5.1 | CDS | 12189940 | 12190014 | 12189940 | ID=cds.MS.gene010553.t1;Parent=MS.gene010553.t1 |
| chr5.1 | exon | 12190203 | 12190607 | 12190203 | ID=MS.gene010553.t1.exon2;Parent=MS.gene010553.t1 |
| chr5.1 | CDS | 12190203 | 12190607 | 12190203 | ID=cds.MS.gene010553.t1;Parent=MS.gene010553.t1 |
| chr5.1 | exon | 12193334 | 12193588 | 12193334 | ID=MS.gene010553.t1.exon3;Parent=MS.gene010553.t1 |
| chr5.1 | CDS | 12193334 | 12193588 | 12193334 | ID=cds.MS.gene010553.t1;Parent=MS.gene010553.t1 |
| chr5.1 | exon | 12193959 | 12194336 | 12193959 | ID=MS.gene010553.t1.exon4;Parent=MS.gene010553.t1 |
| chr5.1 | CDS | 12193959 | 12194336 | 12193959 | ID=cds.MS.gene010553.t1;Parent=MS.gene010553.t1 |
| Gene Sequence |
| Protein sequence |
