Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68203.t1 | XP_003603961.1 | 94.9 | 369 | 18 | 1 | 1 | 368 | 1 | 369 | 4.80E-198 | 700.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68203.t1 | Q9AVK1 | 45.1 | 381 | 193 | 5 | 1 | 367 | 1 | 379 | 3.3e-86 | 320.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68203.t1 | G7J763 | 94.9 | 369 | 18 | 1 | 1 | 368 | 1 | 369 | 3.5e-198 | 700.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050344 | MS.gene68203 | 0.805931 | 1.05E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene68203 | 0.808626 | 2.82E-50 | -1.69E-46 |
| MS.gene051439 | MS.gene68203 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene68203 | 0.818102 | 2.34E-52 | -1.69E-46 |
| MS.gene051517 | MS.gene68203 | 0.829184 | 5.93E-55 | -1.69E-46 |
| MS.gene051973 | MS.gene68203 | 0.812593 | 3.92E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene68203 | 0.802352 | 5.84E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene68203 | 0.81067 | 1.03E-50 | -1.69E-46 |
| MS.gene052702 | MS.gene68203 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene052703 | MS.gene68203 | 0.805998 | 1.02E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene68203 | 0.802923 | 4.45E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene68203 | 0.814145 | 1.79E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene68203 | 0.811444 | 6.98E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene68203 | 0.805606 | 1.23E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene68203 | 0.803493 | 3.40E-49 | -1.69E-46 |
| MS.gene056748 | MS.gene68203 | 0.82677 | 2.26E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene68203 | 0.822646 | 2.12E-53 | -1.69E-46 |
| MS.gene056920 | MS.gene68203 | 0.820303 | 7.36E-53 | -1.69E-46 |
| MS.gene056988 | MS.gene68203 | 0.810852 | 9.38E-51 | -1.69E-46 |
| MS.gene057261 | MS.gene68203 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene68203 | 0.811434 | 7.02E-51 | -1.69E-46 |
| MS.gene057768 | MS.gene68203 | 0.802054 | 6.73E-49 | -1.69E-46 |
| MS.gene058452 | MS.gene68203 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene058603 | MS.gene68203 | 0.828662 | 7.94E-55 | -1.69E-46 |
| MS.gene05926 | MS.gene68203 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene059304 | MS.gene68203 | 0.802807 | 4.71E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene68203 | 0.831016 | 2.12E-55 | -1.69E-46 |
| MS.gene060405 | MS.gene68203 | 0.829056 | 6.37E-55 | -1.69E-46 |
| MS.gene06084 | MS.gene68203 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene061044 | MS.gene68203 | 0.821527 | 3.85E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68203.t1 | MTR_3g117060 | 94.851 | 369 | 18 | 1 | 1 | 368 | 1 | 369 | 0.0 | 728 |
| MS.gene68203.t1 | MTR_3g467560 | 53.678 | 367 | 165 | 3 | 1 | 366 | 25 | 387 | 3.33e-138 | 399 |
| MS.gene68203.t1 | MTR_7g084620 | 51.762 | 369 | 169 | 5 | 1 | 366 | 1 | 363 | 1.71e-130 | 378 |
| MS.gene68203.t1 | MTR_7g084350 | 50.409 | 367 | 175 | 4 | 3 | 366 | 1 | 363 | 2.66e-128 | 373 |
| MS.gene68203.t1 | MTR_8g077040 | 45.187 | 374 | 191 | 4 | 1 | 366 | 1 | 368 | 3.52e-114 | 337 |
| MS.gene68203.t1 | MTR_4g018820 | 46.257 | 374 | 180 | 4 | 1 | 368 | 1 | 359 | 7.69e-114 | 335 |
| MS.gene68203.t1 | MTR_5g020940 | 45.312 | 384 | 181 | 6 | 1 | 368 | 11 | 381 | 1.01e-112 | 333 |
| MS.gene68203.t1 | MTR_3g467270 | 45.867 | 375 | 188 | 6 | 1 | 367 | 1 | 368 | 1.32e-112 | 333 |
| MS.gene68203.t1 | MTR_8g076900 | 44.086 | 372 | 194 | 3 | 1 | 368 | 1 | 362 | 1.53e-109 | 325 |
| MS.gene68203.t1 | MTR_8g020690 | 43.432 | 373 | 193 | 5 | 1 | 368 | 1 | 360 | 3.94e-105 | 313 |
| MS.gene68203.t1 | MTR_6g056070 | 43.548 | 372 | 189 | 5 | 1 | 367 | 1 | 356 | 2.25e-104 | 311 |
| MS.gene68203.t1 | MTR_8g020700 | 41.223 | 376 | 194 | 4 | 1 | 368 | 1 | 357 | 8.26e-99 | 297 |
| MS.gene68203.t1 | MTR_7g084330 | 45.821 | 347 | 160 | 7 | 25 | 366 | 8 | 331 | 3.36e-96 | 290 |
| MS.gene68203.t1 | MTR_5g046110 | 42.486 | 346 | 179 | 4 | 1 | 339 | 61 | 393 | 8.48e-96 | 291 |
| MS.gene68203.t1 | MTR_1g022465 | 43.717 | 382 | 195 | 7 | 1 | 367 | 1 | 377 | 1.09e-91 | 280 |
| MS.gene68203.t1 | MTR_1g022455 | 42.408 | 382 | 201 | 7 | 1 | 367 | 1 | 378 | 6.90e-89 | 273 |
| MS.gene68203.t1 | MTR_8g076900 | 51.200 | 250 | 113 | 2 | 1 | 246 | 1 | 245 | 5.36e-86 | 261 |
| MS.gene68203.t1 | MTR_6g015620 | 95.122 | 123 | 6 | 0 | 246 | 368 | 16 | 138 | 3.01e-78 | 237 |
| MS.gene68203.t1 | MTR_8g020700 | 45.769 | 260 | 131 | 2 | 1 | 255 | 1 | 255 | 5.71e-77 | 238 |
| MS.gene68203.t1 | MTR_3g054330 | 35.450 | 378 | 220 | 12 | 1 | 365 | 10 | 376 | 2.26e-62 | 204 |
| MS.gene68203.t1 | MTR_8g077030 | 36.735 | 343 | 127 | 6 | 1 | 342 | 1 | 254 | 2.24e-59 | 200 |
| MS.gene68203.t1 | MTR_5g093900 | 32.552 | 384 | 233 | 9 | 1 | 365 | 13 | 389 | 8.76e-58 | 192 |
| MS.gene68203.t1 | MTR_3g052700 | 32.984 | 382 | 232 | 10 | 1 | 365 | 13 | 387 | 1.32e-57 | 192 |
| MS.gene68203.t1 | MTR_1g108660 | 32.378 | 349 | 195 | 8 | 26 | 361 | 9 | 329 | 1.92e-52 | 177 |
| MS.gene68203.t1 | MTR_7g084340 | 43.802 | 121 | 63 | 2 | 248 | 366 | 12 | 129 | 8.94e-23 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68203.t1 | AT5G38020 | 44.663 | 356 | 178 | 6 | 6 | 350 | 3 | 350 | 9.16e-96 | 290 |
| MS.gene68203.t1 | AT3G11480 | 42.133 | 375 | 189 | 6 | 2 | 367 | 24 | 379 | 2.20e-92 | 281 |
| MS.gene68203.t1 | AT4G36470 | 42.319 | 345 | 183 | 5 | 3 | 339 | 6 | 342 | 3.51e-90 | 276 |
| MS.gene68203.t1 | AT5G66430 | 40.984 | 366 | 197 | 6 | 9 | 367 | 1 | 354 | 6.98e-90 | 274 |
| MS.gene68203.t1 | AT3G21950 | 43.266 | 349 | 177 | 7 | 6 | 342 | 3 | 342 | 1.09e-87 | 269 |
| MS.gene68203.t1 | AT5G38020 | 45.687 | 313 | 152 | 5 | 48 | 350 | 7 | 311 | 4.32e-86 | 264 |
| MS.gene68203.t1 | AT1G19640 | 40.665 | 391 | 203 | 7 | 1 | 366 | 1 | 387 | 1.67e-84 | 262 |
| MS.gene68203.t1 | AT5G04370 | 39.730 | 370 | 196 | 7 | 7 | 367 | 39 | 390 | 9.80e-84 | 260 |
| MS.gene68203.t1 | AT5G04370 | 39.730 | 370 | 196 | 7 | 7 | 367 | 58 | 409 | 1.20e-83 | 260 |
| MS.gene68203.t1 | AT5G04370 | 39.730 | 370 | 196 | 7 | 7 | 367 | 44 | 395 | 1.41e-83 | 259 |
| MS.gene68203.t1 | AT3G21950 | 39.895 | 381 | 176 | 8 | 6 | 342 | 3 | 374 | 4.32e-81 | 253 |
| MS.gene68203.t1 | AT5G04380 | 40.346 | 347 | 186 | 6 | 7 | 346 | 36 | 368 | 9.28e-80 | 249 |
| MS.gene68203.t1 | AT2G14060 | 40.113 | 354 | 193 | 8 | 7 | 352 | 12 | 354 | 4.63e-76 | 239 |
| MS.gene68203.t1 | AT5G04380 | 39.481 | 347 | 182 | 7 | 7 | 346 | 32 | 357 | 2.05e-75 | 238 |
| MS.gene68203.t1 | AT5G04380 | 41.639 | 305 | 158 | 5 | 48 | 346 | 7 | 297 | 9.87e-75 | 234 |
| MS.gene68203.t1 | AT5G55250 | 34.819 | 359 | 211 | 9 | 1 | 345 | 13 | 362 | 8.96e-61 | 200 |
| MS.gene68203.t1 | AT2G14060 | 45.333 | 225 | 114 | 3 | 6 | 229 | 11 | 227 | 3.64e-58 | 189 |
| MS.gene68203.t1 | AT1G15125 | 33.894 | 357 | 184 | 11 | 9 | 346 | 1 | 324 | 4.84e-57 | 189 |
| MS.gene68203.t1 | AT1G68040 | 32.787 | 366 | 209 | 10 | 3 | 356 | 7 | 347 | 9.30e-55 | 184 |
| MS.gene68203.t1 | AT5G38100 | 33.523 | 352 | 195 | 8 | 9 | 346 | 10 | 336 | 1.27e-51 | 176 |
| MS.gene68203.t1 | AT5G37970 | 33.333 | 363 | 196 | 13 | 5 | 348 | 6 | 341 | 3.05e-51 | 175 |
| MS.gene68203.t1 | AT5G55250 | 33.742 | 326 | 193 | 9 | 34 | 345 | 8 | 324 | 9.62e-51 | 173 |
| MS.gene68203.t1 | AT3G44840 | 33.140 | 344 | 197 | 8 | 9 | 345 | 7 | 324 | 1.96e-50 | 172 |
| MS.gene68203.t1 | AT5G37990 | 33.333 | 363 | 196 | 12 | 5 | 348 | 6 | 341 | 5.84e-50 | 171 |
| MS.gene68203.t1 | AT3G44870 | 37.413 | 286 | 156 | 8 | 9 | 287 | 7 | 276 | 6.41e-49 | 169 |
| MS.gene68203.t1 | AT5G38100 | 34.868 | 304 | 166 | 6 | 52 | 346 | 33 | 313 | 4.68e-48 | 166 |
| MS.gene68203.t1 | AT5G56300 | 30.110 | 362 | 222 | 10 | 2 | 346 | 17 | 364 | 2.58e-47 | 165 |
| MS.gene68203.t1 | AT5G38780 | 31.564 | 358 | 204 | 11 | 5 | 346 | 6 | 338 | 3.82e-47 | 164 |
| MS.gene68203.t1 | AT3G44860 | 36.364 | 286 | 162 | 7 | 9 | 287 | 7 | 279 | 8.59e-47 | 163 |
| MS.gene68203.t1 | AT1G66700 | 35.739 | 291 | 160 | 9 | 9 | 287 | 9 | 284 | 7.78e-46 | 160 |
| MS.gene68203.t1 | AT1G66720 | 32.653 | 343 | 190 | 11 | 9 | 339 | 9 | 322 | 1.53e-43 | 154 |
| MS.gene68203.t1 | AT5G38780 | 33.443 | 305 | 166 | 10 | 54 | 346 | 10 | 289 | 1.72e-43 | 153 |
| MS.gene68203.t1 | AT4G26420 | 29.248 | 359 | 222 | 10 | 2 | 342 | 6 | 350 | 2.45e-41 | 149 |
| MS.gene68203.t1 | AT1G66690 | 32.425 | 367 | 208 | 11 | 1 | 353 | 1 | 341 | 2.81e-40 | 145 |
| MS.gene68203.t1 | AT1G15125 | 36.538 | 260 | 125 | 9 | 9 | 249 | 1 | 239 | 6.01e-39 | 139 |
| MS.gene68203.t1 | AT5G38100 | 36.800 | 250 | 132 | 6 | 9 | 244 | 10 | 247 | 7.70e-38 | 136 |
| MS.gene68203.t1 | AT5G38100 | 36.800 | 250 | 132 | 6 | 9 | 244 | 10 | 247 | 7.87e-38 | 136 |
| MS.gene68203.t1 | AT1G66700 | 36.279 | 215 | 119 | 5 | 9 | 218 | 9 | 210 | 2.29e-34 | 127 |
| MS.gene68203.t1 | AT4G26420 | 32.018 | 228 | 140 | 6 | 2 | 223 | 6 | 224 | 1.69e-29 | 114 |
| MS.gene68203.t1 | AT4G26420 | 31.674 | 221 | 136 | 6 | 9 | 223 | 1 | 212 | 3.48e-27 | 108 |
Find 68 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAAGATTATTAAACTTTA+TGG | 0.051266 | 3.1:+92297509 | MS.gene68203:CDS |
| TGCAAATAACTCCACATTTC+AGG | 0.197207 | 3.1:+92294888 | MS.gene68203:CDS |
| TCAGCCACTTTCAAACAATT+TGG | 0.225467 | 3.1:-92295222 | None:intergenic |
| ACTTTATGGAGTTGAGAAAT+TGG | 0.267027 | 3.1:+92297523 | MS.gene68203:CDS |
| TAATGGATGAATTGTTCATT+AGG | 0.276319 | 3.1:+92297480 | MS.gene68203:CDS |
| ATCAGGTCCAAATGCACTTT+TGG | 0.294357 | 3.1:+92295257 | MS.gene68203:CDS |
| ATTGGTGGAGCAATCAAAAT+TGG | 0.310300 | 3.1:+92297220 | MS.gene68203:CDS |
| GCAATGGTCCTAACACTTAT+TGG | 0.313733 | 3.1:+92296726 | MS.gene68203:CDS |
| TTTAGTCCATGTTTCTTTAG+TGG | 0.317085 | 3.1:+92295447 | MS.gene68203:CDS |
| CGTTCGTCTGAACTGCTTCC+TGG | 0.322621 | 3.1:+92296699 | MS.gene68203:CDS |
| CATTTCCAAATAGGTCATTA+AGG | 0.340267 | 3.1:-92295356 | None:intergenic |
| GATGCAACCAAAAGTGCATT+TGG | 0.356622 | 3.1:-92295264 | None:intergenic |
| AGAGTTTGGAGAAGAAATAA+TGG | 0.384468 | 3.1:+92297463 | MS.gene68203:CDS |
| CTGGAGGGCTTGCCCTTGTT+AGG | 0.391432 | 3.1:-92296617 | None:intergenic |
| TAAATATTCCCTTTGTTCAA+TGG | 0.392424 | 3.1:-92296594 | None:intergenic |
| CATCTCTGCCAATAAGTGTT+AGG | 0.402508 | 3.1:-92296734 | None:intergenic |
| TATTGAAGTCATTTCCAAAT+AGG | 0.408776 | 3.1:-92295365 | None:intergenic |
| ATAAATGCATGGGTTGTCAT+TGG | 0.420457 | 3.1:+92296771 | MS.gene68203:CDS |
| AAAGCATCTTGCAACACATC+TGG | 0.424458 | 3.1:-92296567 | None:intergenic |
| GCTGACTTAGGTTGTTCATC+AGG | 0.433358 | 3.1:+92295240 | MS.gene68203:CDS |
| CTCCTCAGACGTAGGGCAAT+AGG | 0.442711 | 3.1:-92297261 | None:intergenic |
| AGAAAAGTGATTGAAGAAGA+AGG | 0.455276 | 3.1:+92297287 | MS.gene68203:CDS |
| AGAGACAATTAGAACGGATT+GGG | 0.455968 | 3.1:+92297331 | MS.gene68203:CDS |
| CTTTAGAACCATTGAACAAA+GGG | 0.461138 | 3.1:+92296586 | MS.gene68203:CDS |
| GGAAAGCCAATGTAGACTAT+AGG | 0.465513 | 3.1:-92295532 | None:intergenic |
| TAGAGACAATTAGAACGGAT+TGG | 0.473214 | 3.1:+92297330 | MS.gene68203:CDS |
| GAAAAGTGATTGAAGAAGAA+GGG | 0.480442 | 3.1:+92297288 | MS.gene68203:CDS |
| TTGGTATATGCAGAAATTGG+TGG | 0.497369 | 3.1:+92297205 | MS.gene68203:intron |
| TTTCTAATCTCCTCAGACGT+AGG | 0.497948 | 3.1:-92297269 | None:intergenic |
| TGTTTCTTTAGTGGAACACC+TGG | 0.509820 | 3.1:+92295456 | MS.gene68203:CDS |
| AAAATGAACTTATAAATGCA+TGG | 0.515846 | 3.1:+92296760 | MS.gene68203:CDS |
| ATTCCTCCTATAGTCTACAT+TGG | 0.529876 | 3.1:+92295526 | MS.gene68203:CDS |
| ACTGCTTCCTGGTGGTGCAA+TGG | 0.531373 | 3.1:+92296710 | MS.gene68203:CDS |
| GAACAAGTCCTTCACATGAA+TGG | 0.532956 | 3.1:+92294844 | MS.gene68203:CDS |
| TTCTAATCTCCTCAGACGTA+GGG | 0.536749 | 3.1:-92297268 | None:intergenic |
| AAGGGAATATTTACCTAACA+AGG | 0.540815 | 3.1:+92296604 | MS.gene68203:CDS |
| TGTTTGAAAGTGGCTGACTT+AGG | 0.547633 | 3.1:+92295228 | MS.gene68203:CDS |
| TAGTCTACATTGGCTTTCCA+AGG | 0.551384 | 3.1:+92295536 | MS.gene68203:CDS |
| AAATGAACTTATAAATGCAT+GGG | 0.553184 | 3.1:+92296761 | MS.gene68203:CDS |
| ATCAGGGAGTAACTTAAAAG+TGG | 0.559627 | 3.1:-92295388 | None:intergenic |
| ACTGAAACATGGGTGACTCA+TGG | 0.560015 | 3.1:-92295329 | None:intergenic |
| TTATGGAGTTGAGAAATTGG+AGG | 0.566069 | 3.1:+92297526 | MS.gene68203:CDS |
| AAGCCAATGTAGACTATAGG+AGG | 0.570549 | 3.1:-92295529 | None:intergenic |
| CTTCACATGAATGGAGGTGA+GGG | 0.570634 | 3.1:+92294853 | MS.gene68203:CDS |
| AAGAGACTACAAGAAGAGAA+AGG | 0.570921 | 3.1:+92295417 | MS.gene68203:CDS |
| AAGGTTAGAGACAATTAGAA+CGG | 0.575103 | 3.1:+92297325 | MS.gene68203:CDS |
| ATTAATCATTACCTGAAATG+TGG | 0.578791 | 3.1:-92294899 | None:intergenic |
| ATCCTATTGCCCTACGTCTG+AGG | 0.583567 | 3.1:+92297259 | MS.gene68203:CDS |
| CCTCACCTCCATTCATGTGA+AGG | 0.588787 | 3.1:-92294852 | None:intergenic |
| GTTAGGACCATTGCACCACC+AGG | 0.591625 | 3.1:-92296717 | None:intergenic |
| GCTTTAGAACCATTGAACAA+AGG | 0.600431 | 3.1:+92296585 | MS.gene68203:CDS |
| AACAAGGGCAAGCCCTCCAG+CGG | 0.613717 | 3.1:+92296620 | MS.gene68203:CDS |
| GTTTCTTTAGTGGAACACCT+GGG | 0.617366 | 3.1:+92295457 | MS.gene68203:CDS |
| CCTTCACATGAATGGAGGTG+AGG | 0.617516 | 3.1:+92294852 | MS.gene68203:CDS |
| TACTTGAAGATAGTATAATG+AGG | 0.631232 | 3.1:+92295181 | MS.gene68203:CDS |
| ACTCAATGACATGGCCGCAG+AGG | 0.644339 | 3.1:+92296800 | MS.gene68203:CDS |
| TGGCATGGCACTCAATGACA+TGG | 0.644988 | 3.1:+92296791 | MS.gene68203:CDS |
| GCAGAGAATGGTGATGCTGA+CGG | 0.652786 | 3.1:+92295149 | MS.gene68203:intron |
| CAAGTCCTTCACATGAATGG+AGG | 0.653986 | 3.1:+92294847 | MS.gene68203:CDS |
| GGTGTTCCACTAAAGAAACA+TGG | 0.655731 | 3.1:-92295453 | None:intergenic |
| TGCATGGGTTGTCATTGGCA+TGG | 0.666196 | 3.1:+92296776 | MS.gene68203:CDS |
| AGGGAATATTTACCTAACAA+GGG | 0.666854 | 3.1:+92296605 | MS.gene68203:CDS |
| TCAGACGTAGGGCAATAGGA+TGG | 0.668240 | 3.1:-92297257 | None:intergenic |
| ATGTTGTTTGATTACCTCTG+CGG | 0.673521 | 3.1:-92296814 | None:intergenic |
| AAAAGTGTATGGAATTGTCG+GGG | 0.680045 | 3.1:-92295500 | None:intergenic |
| GATGAAGACACAAGAGCTGA+GGG | 0.692498 | 3.1:+92297395 | MS.gene68203:CDS |
| TCGTCTGAACTGCTTCCTGG+TGG | 0.698405 | 3.1:+92296702 | MS.gene68203:CDS |
| TGATGAAGACACAAGAGCTG+AGG | 0.700921 | 3.1:+92297394 | MS.gene68203:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTAAAAAAAATT+AGG | - | chr3.1:92296195-92296214 | None:intergenic | 0.0% |
| !! | AAAAATCATATACTATATTA+TGG | - | chr3.1:92296452-92296471 | None:intergenic | 10.0% |
| !! | AAATAAAAAGTTGTAATTAA+TGG | + | chr3.1:92296206-92296225 | MS.gene68203:intron | 10.0% |
| !! | AAATTAATTAAACATTAACA+GGG | - | chr3.1:92296536-92296555 | None:intergenic | 10.0% |
| !! | AATAAGATTATTAAACTTTA+TGG | + | chr3.1:92297509-92297528 | MS.gene68203:CDS | 10.0% |
| !! | TAAAAAAAATTTATATAAGC+GGG | - | chr3.1:92296942-92296961 | None:intergenic | 10.0% |
| !! | TATCATTATACTAATTAATT+TGG | + | chr3.1:92297055-92297074 | MS.gene68203:intron | 10.0% |
| !!! | TATGTATGTATTATTTTATT+TGG | + | chr3.1:92297186-92297205 | MS.gene68203:intron | 10.0% |
| !!! | TTTTAAAATATTTTTTATCG+CGG | - | chr3.1:92296045-92296064 | None:intergenic | 10.0% |
| !! | AATTAATTAAACATTAACAG+GGG | - | chr3.1:92296535-92296554 | None:intergenic | 15.0% |
| !! | CAAATTAATTAAACATTAAC+AGG | - | chr3.1:92296537-92296556 | None:intergenic | 15.0% |
| !! | CTGTTAATGTTTAATTAATT+TGG | + | chr3.1:92296535-92296554 | MS.gene68203:intron | 15.0% |
| !!! | AATGATATTTTGATAATTGT+GGG | - | chr3.1:92297042-92297061 | None:intergenic | 15.0% |
| !!! | AGTATATGATTTTTTTTTGA+AGG | + | chr3.1:92296458-92296477 | MS.gene68203:intron | 15.0% |
| !!! | TAATGATATTTTGATAATTG+TGG | - | chr3.1:92297043-92297062 | None:intergenic | 15.0% |
| !! | AAAAAAATTGTTGCAACAAT+TGG | + | chr3.1:92296136-92296155 | MS.gene68203:intron | 20.0% |
| !! | AAAATGAACTTATAAATGCA+TGG | + | chr3.1:92296760-92296779 | MS.gene68203:CDS | 20.0% |
| !! | AAATGAACTTATAAATGCAT+GGG | + | chr3.1:92296761-92296780 | MS.gene68203:CDS | 20.0% |
| !! | AAATTATCTGCAAATATGAT+TGG | - | chr3.1:92296304-92296323 | None:intergenic | 20.0% |
| !! | ACTCACTTTGTAAATAATTA+AGG | - | chr3.1:92297108-92297127 | None:intergenic | 20.0% |
| !!! | ACATACATATTTTTTTTTCG+TGG | - | chr3.1:92296411-92296430 | None:intergenic | 20.0% |
| !!! | ATGATATTTTGATAATTGTG+GGG | - | chr3.1:92297041-92297060 | None:intergenic | 20.0% |
| !!! | TTCGTGGTATAATAATTTTT+TGG | - | chr3.1:92296395-92296414 | None:intergenic | 20.0% |
| !!! | TTGACAATTTGTTTATAAGT+GGG | - | chr3.1:92295982-92296001 | None:intergenic | 20.0% |
| ! | ATGCAAATTCTACAAAACAA+TGG | - | chr3.1:92294969-92294988 | None:intergenic | 25.0% |
| ! | ATTAAGGAAAAACTGAAACA+TGG | - | chr3.1:92295343-92295362 | None:intergenic | 25.0% |
| ! | ATTAATCATTACCTGAAATG+TGG | - | chr3.1:92294902-92294921 | None:intergenic | 25.0% |
| ! | CAATAAGCACAAAATAACTT+CGG | - | chr3.1:92295676-92295695 | None:intergenic | 25.0% |
| ! | GTAGTCTCTTATAAAAATCA+GGG | - | chr3.1:92295407-92295426 | None:intergenic | 25.0% |
| ! | TAAATATTCCCTTTGTTCAA+TGG | - | chr3.1:92296597-92296616 | None:intergenic | 25.0% |
| ! | TACTTGAAGATAGTATAATG+AGG | + | chr3.1:92295181-92295200 | MS.gene68203:CDS | 25.0% |
| ! | TATTGAAGTCATTTCCAAAT+AGG | - | chr3.1:92295368-92295387 | None:intergenic | 25.0% |
| ! | TATTTGGTATATGCAGAAAT+TGG | + | chr3.1:92297202-92297221 | MS.gene68203:intron | 25.0% |
| ! | TGATGTCAATATATATATCC+TGG | + | chr3.1:92297082-92297101 | MS.gene68203:intron | 25.0% |
| ! | TGTAGTCTCTTATAAAAATC+AGG | - | chr3.1:92295408-92295427 | None:intergenic | 25.0% |
| ! | TTAAGGAAAAACTGAAACAT+GGG | - | chr3.1:92295342-92295361 | None:intergenic | 25.0% |
| ! | TTGCAAAGTAATAATATGGT+AGG | + | chr3.1:92296504-92296523 | MS.gene68203:intron | 25.0% |
| ! | TTGTCTATATGTCTATAAGT+GGG | + | chr3.1:92295734-92295753 | MS.gene68203:intron | 25.0% |
| ! | TTTGTCTATATGTCTATAAG+TGG | + | chr3.1:92295733-92295752 | MS.gene68203:intron | 25.0% |
| !! | AAAAAAGTGTATGGAATTGT+CGG | - | chr3.1:92295505-92295524 | None:intergenic | 25.0% |
| !! | AAAAATAAGATTGGTTGTGT+TGG | - | chr3.1:92296271-92296290 | None:intergenic | 25.0% |
| !! | AAAAGTTGACTAGTTGATAT+TGG | - | chr3.1:92294942-92294961 | None:intergenic | 25.0% |
| !! | ATTTTCATATCATTTAAGCC+CGG | + | chr3.1:92295588-92295607 | MS.gene68203:intron | 25.0% |
| !! | CTTGACAATTTGTTTATAAG+TGG | - | chr3.1:92295983-92296002 | None:intergenic | 25.0% |
| !! | TAATGGATGAATTGTTCATT+AGG | + | chr3.1:92297480-92297499 | MS.gene68203:CDS | 25.0% |
| !! | TGACAATTTGTTTATAAGTG+GGG | - | chr3.1:92295981-92296000 | None:intergenic | 25.0% |
| !! | TTTTCCAAATTGTTTGAAAG+TGG | + | chr3.1:92295218-92295237 | MS.gene68203:CDS | 25.0% |
| !! | TTTTTATATTTGTGACCAAC+CGG | - | chr3.1:92295610-92295629 | None:intergenic | 25.0% |
| !! | TTTTTCCTTAATGACCTATT+TGG | + | chr3.1:92295351-92295370 | MS.gene68203:CDS | 25.0% |
| !!! | ATACACAGTTTTGTTTTGAT+AGG | - | chr3.1:92297165-92297184 | None:intergenic | 25.0% |
| !!! | CACAACCAATCTTATTTTTT+TGG | + | chr3.1:92296272-92296291 | MS.gene68203:intron | 25.0% |
| !!! | TATCAAAAGCTTTTGGTAAT+TGG | - | chr3.1:92294998-92295017 | None:intergenic | 25.0% |
| !!! | TATCAACTAGTCAACTTTTT+TGG | + | chr3.1:92294943-92294962 | MS.gene68203:intron | 25.0% |
| AAGGGAATATTTACCTAACA+AGG | + | chr3.1:92296604-92296623 | MS.gene68203:CDS | 30.0% | |
| AAGGTTAGAGACAATTAGAA+CGG | + | chr3.1:92297325-92297344 | MS.gene68203:CDS | 30.0% | |
| ACTTTATGGAGTTGAGAAAT+TGG | + | chr3.1:92297523-92297542 | MS.gene68203:CDS | 30.0% | |
| AGAAAAGTGATTGAAGAAGA+AGG | + | chr3.1:92297287-92297306 | MS.gene68203:CDS | 30.0% | |
| AGACATATAGACAAATTGTC+AGG | - | chr3.1:92295728-92295747 | None:intergenic | 30.0% | |
| AGAGTTTGGAGAAGAAATAA+TGG | + | chr3.1:92297463-92297482 | MS.gene68203:CDS | 30.0% | |
| AGGGAATATTTACCTAACAA+GGG | + | chr3.1:92296605-92296624 | MS.gene68203:CDS | 30.0% | |
| CATTCTCTGCATACATATAT+GGG | - | chr3.1:92295139-92295158 | None:intergenic | 30.0% | |
| CATTTCCAAATAGGTCATTA+AGG | - | chr3.1:92295359-92295378 | None:intergenic | 30.0% | |
| CTGGACCAAAAAAATAAGAT+TGG | - | chr3.1:92296280-92296299 | None:intergenic | 30.0% | |
| CTTTGTAAATAATTAAGGCC+AGG | - | chr3.1:92297103-92297122 | None:intergenic | 30.0% | |
| GAAAAGTGATTGAAGAAGAA+GGG | + | chr3.1:92297288-92297307 | MS.gene68203:CDS | 30.0% | |
| TCGCTTGCAAAGTAATAATA+TGG | + | chr3.1:92296500-92296519 | MS.gene68203:intron | 30.0% | |
| TGTCTATATGTCTATAAGTG+GGG | + | chr3.1:92295735-92295754 | MS.gene68203:intron | 30.0% | |
| TTTAGTCCATGTTTCTTTAG+TGG | + | chr3.1:92295447-92295466 | MS.gene68203:CDS | 30.0% | |
| TTTGACATCTCTAACACTTA+AGG | - | chr3.1:92295098-92295117 | None:intergenic | 30.0% | |
| ! | AAAAAGTGTATGGAATTGTC+GGG | - | chr3.1:92295504-92295523 | None:intergenic | 30.0% |
| ! | GACAATTTGTTTATAAGTGG+GGG | - | chr3.1:92295980-92295999 | None:intergenic | 30.0% |
| ! | TGGACAATATCAAAAGCTTT+TGG | - | chr3.1:92295005-92295024 | None:intergenic | 30.0% |
| ! | TTTTATATTTGTGACCAACC+GGG | - | chr3.1:92295609-92295628 | None:intergenic | 30.0% |
| !! | CTTTAGAACCATTGAACAAA+GGG | + | chr3.1:92296586-92296605 | MS.gene68203:CDS | 30.0% |
| !!! | TCAATTTTGAAGTCAGAGTT+TGG | + | chr3.1:92297449-92297468 | MS.gene68203:CDS | 30.0% |
| AAGAGACTACAAGAAGAGAA+AGG | + | chr3.1:92295417-92295436 | MS.gene68203:CDS | 35.0% | |
| ATCAGGGAGTAACTTAAAAG+TGG | - | chr3.1:92295391-92295410 | None:intergenic | 35.0% | |
| ATTCCTCCTATAGTCTACAT+TGG | + | chr3.1:92295526-92295545 | MS.gene68203:CDS | 35.0% | |
| ATTGGTGGAGCAATCAAAAT+TGG | + | chr3.1:92297220-92297239 | MS.gene68203:CDS | 35.0% | |
| CCATATATGTATGCAGAGAA+TGG | + | chr3.1:92295137-92295156 | MS.gene68203:intron | 35.0% | |
| CCATTCTCTGCATACATATA+TGG | - | chr3.1:92295140-92295159 | None:intergenic | 35.0% | |
| GTCTATATGTCTATAAGTGG+GGG | + | chr3.1:92295736-92295755 | MS.gene68203:intron | 35.0% | |
| TAGAGACAATTAGAACGGAT+TGG | + | chr3.1:92297330-92297349 | MS.gene68203:CDS | 35.0% | |
| TATTGTTAAGAGTCCCACAT+CGG | + | chr3.1:92295691-92295710 | MS.gene68203:intron | 35.0% | |
| TCCAAGGTAGTATACTAATC+TGG | + | chr3.1:92295552-92295571 | MS.gene68203:intron | 35.0% | |
| TCCAGATTAGTATACTACCT+TGG | - | chr3.1:92295556-92295575 | None:intergenic | 35.0% | |
| TGAAGCGTGAACATAAATGA+CGG | + | chr3.1:92295828-92295847 | MS.gene68203:intron | 35.0% | |
| TGATACCATCTTAGAAATCG+TGG | + | chr3.1:92295907-92295926 | MS.gene68203:intron | 35.0% | |
| TGCAAATAACTCCACATTTC+AGG | + | chr3.1:92294888-92294907 | MS.gene68203:CDS | 35.0% | |
| TGTTATCAGGTTTCCGTTAT+CGG | - | chr3.1:92295859-92295878 | None:intergenic | 35.0% | |
| TTATGGAGTTGAGAAATTGG+AGG | + | chr3.1:92297526-92297545 | MS.gene68203:CDS | 35.0% | |
| TTGGTATATGCAGAAATTGG+TGG | + | chr3.1:92297205-92297224 | MS.gene68203:intron | 35.0% | |
| ! | AAAAGTGTATGGAATTGTCG+GGG | - | chr3.1:92295503-92295522 | None:intergenic | 35.0% |
| ! | AAGGGTCTTTTGATGTTCAA+AGG | + | chr3.1:92297306-92297325 | MS.gene68203:CDS | 35.0% |
| ! | AGAGACAATTAGAACGGATT+GGG | + | chr3.1:92297331-92297350 | MS.gene68203:CDS | 35.0% |
| ! | ATAAATGCATGGGTTGTCAT+TGG | + | chr3.1:92296771-92296790 | MS.gene68203:CDS | 35.0% |
| ! | ATCTGCAAATATGATTGGTC+TGG | - | chr3.1:92296299-92296318 | None:intergenic | 35.0% |
| ! | ATGTTGTTTGATTACCTCTG+CGG | - | chr3.1:92296817-92296836 | None:intergenic | 35.0% |
| ! | GGAGGAATGAAAAAAGTGTA+TGG | - | chr3.1:92295514-92295533 | None:intergenic | 35.0% |
| ! | TCAGCCACTTTCAAACAATT+TGG | - | chr3.1:92295225-92295244 | None:intergenic | 35.0% |
| !! | GCTTTAGAACCATTGAACAA+AGG | + | chr3.1:92296585-92296604 | MS.gene68203:CDS | 35.0% |
| AAGCCAATGTAGACTATAGG+AGG | - | chr3.1:92295532-92295551 | None:intergenic | 40.0% | |
| AAGTGTTAAGAGTCCCACAT+CGG | - | chr3.1:92296017-92296036 | None:intergenic | 40.0% | |
| ACCATCTTAGAAATCGTGGT+TGG | + | chr3.1:92295911-92295930 | MS.gene68203:intron | 40.0% | |
| CATCTCTGCCAATAAGTGTT+AGG | - | chr3.1:92296737-92296756 | None:intergenic | 40.0% | |
| CCATCTTAGAAATCGTGGTT+GGG | + | chr3.1:92295912-92295931 | MS.gene68203:intron | 40.0% | |
| GAACAAGTCCTTCACATGAA+TGG | + | chr3.1:92294844-92294863 | MS.gene68203:CDS | 40.0% | |
| GAAGCGTGAACATAAATGAC+GGG | + | chr3.1:92295829-92295848 | MS.gene68203:intron | 40.0% | |
| GCAATGGTCCTAACACTTAT+TGG | + | chr3.1:92296726-92296745 | MS.gene68203:CDS | 40.0% | |
| GGAAAGCCAATGTAGACTAT+AGG | - | chr3.1:92295535-92295554 | None:intergenic | 40.0% | |
| GGTGTTCCACTAAAGAAACA+TGG | - | chr3.1:92295456-92295475 | None:intergenic | 40.0% | |
| GTTATCAGGTTTCCGTTATC+GGG | - | chr3.1:92295858-92295877 | None:intergenic | 40.0% | |
| GTTTCTTTAGTGGAACACCT+GGG | + | chr3.1:92295457-92295476 | MS.gene68203:CDS | 40.0% | |
| TCATATCATTTAAGCCCGGT+TGG | + | chr3.1:92295592-92295611 | MS.gene68203:intron | 40.0% | |
| TGTTAAGAGTCCCACAAAAC+CGG | - | chr3.1:92295780-92295799 | None:intergenic | 40.0% | |
| TGTTTCTTTAGTGGAACACC+TGG | + | chr3.1:92295456-92295475 | MS.gene68203:CDS | 40.0% | |
| TTCTAATCTCCTCAGACGTA+GGG | - | chr3.1:92297271-92297290 | None:intergenic | 40.0% | |
| TTTCTAATCTCCTCAGACGT+AGG | - | chr3.1:92297272-92297291 | None:intergenic | 40.0% | |
| ! | AAAGCATCTTGCAACACATC+TGG | - | chr3.1:92296570-92296589 | None:intergenic | 40.0% |
| ! | ATCAGGTCCAAATGCACTTT+TGG | + | chr3.1:92295257-92295276 | MS.gene68203:CDS | 40.0% |
| ! | GAACACCTGGGTCTTTTTAT+GGG | + | chr3.1:92295469-92295488 | MS.gene68203:CDS | 40.0% |
| ! | GACTAGTTGATATTGGAGCA+AGG | - | chr3.1:92294935-92294954 | None:intergenic | 40.0% |
| ! | GATGCAACCAAAAGTGCATT+TGG | - | chr3.1:92295267-92295286 | None:intergenic | 40.0% |
| ! | TGTTTGAAAGTGGCTGACTT+AGG | + | chr3.1:92295228-92295247 | MS.gene68203:CDS | 40.0% |
| !! | AAATATGCTTTTTGCACCGC+TGG | - | chr3.1:92296639-92296658 | None:intergenic | 40.0% |
| !! | GATAACGGAAACCTGATAAC+AGG | + | chr3.1:92295858-92295877 | MS.gene68203:intron | 40.0% |
| !! | TAGTCTACATTGGCTTTCCA+AGG | + | chr3.1:92295536-92295555 | MS.gene68203:CDS | 40.0% |
| AACGGAAACCTGATAACAGG+TGG | + | chr3.1:92295861-92295880 | MS.gene68203:intron | 45.0% | |
| ACTGAAACATGGGTGACTCA+TGG | - | chr3.1:92295332-92295351 | None:intergenic | 45.0% | |
| AGAGCCTCTTCACGATTCTT+TGG | - | chr3.1:92295888-92295907 | None:intergenic | 45.0% | |
| AGTCTCCCATAAAAAGACCC+AGG | - | chr3.1:92295477-92295496 | None:intergenic | 45.0% | |
| ATGTGTAATCCTGAGCGTGA+GGG | - | chr3.1:92295807-92295826 | None:intergenic | 45.0% | |
| CAAGTCCTTCACATGAATGG+AGG | + | chr3.1:92294847-92294866 | MS.gene68203:CDS | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | + | chr3.1:92295936-92295955 | MS.gene68203:intron | 45.0% | |
| CTTCACATGAATGGAGGTGA+GGG | + | chr3.1:92294853-92294872 | MS.gene68203:CDS | 45.0% | |
| GAGCCTCTTCACGATTCTTT+GGG | - | chr3.1:92295887-92295906 | None:intergenic | 45.0% | |
| GATGAAGACACAAGAGCTGA+GGG | + | chr3.1:92297395-92297414 | MS.gene68203:CDS | 45.0% | |
| TGATGAAGACACAAGAGCTG+AGG | + | chr3.1:92297394-92297413 | MS.gene68203:CDS | 45.0% | |
| ! | CCCAACCACGATTTCTAAGA+TGG | - | chr3.1:92295915-92295934 | None:intergenic | 45.0% |
| ! | GCTGACTTAGGTTGTTCATC+AGG | + | chr3.1:92295240-92295259 | MS.gene68203:CDS | 45.0% |
| ! | GGAACACCTGGGTCTTTTTA+TGG | + | chr3.1:92295468-92295487 | MS.gene68203:CDS | 45.0% |
| ! | TTAAGAGTCCCACATCGGTT+AGG | + | chr3.1:92295696-92295715 | MS.gene68203:intron | 45.0% |
| ! | TTAAGAGTCCCACATCGGTT+AGG | - | chr3.1:92295715-92295696 | None:intergenic | 45.0% |
| !! | ACCTCATAAGCCGGTTTTGT+GGG | + | chr3.1:92295767-92295786 | MS.gene68203:intron | 45.0% |
| !! | ACCTCATAAGCCGGTTTTGT+GGG | - | chr3.1:92295786-92295767 | None:intergenic | 45.0% |
| !! | TTAAAAAAAATTTATATAAG+CGG | - | chr3.1:92296943-92296962 | None:intergenic | 5.0% |
| !!! | TAACTTTTTTATAATATAAA+TGG | - | chr3.1:92295025-92295044 | None:intergenic | 5.0% |
| !!! | TTAATTTATTTTTTTTTGAA+AGG | - | chr3.1:92296889-92296908 | None:intergenic | 5.0% |
| AAGCCAACTCCTAACCGATG+TGG | + | chr3.1:92296000-92296019 | MS.gene68203:intron | 50.0% | |
| AGCCAACTCCTAACCGATGT+GGG | + | chr3.1:92296001-92296020 | MS.gene68203:intron | 50.0% | |
| ATCCTATTGCCCTACGTCTG+AGG | + | chr3.1:92297259-92297278 | MS.gene68203:CDS | 50.0% | |
| CCTCACCTCCATTCATGTGA+AGG | - | chr3.1:92294855-92294874 | None:intergenic | 50.0% | |
| CCTTCACATGAATGGAGGTG+AGG | + | chr3.1:92294852-92294871 | MS.gene68203:CDS | 50.0% | |
| GATGTGTAATCCTGAGCGTG+AGG | - | chr3.1:92295808-92295827 | None:intergenic | 50.0% | |
| GCAATCCTCACCTCATAAGC+CGG | + | chr3.1:92295758-92295777 | MS.gene68203:intron | 50.0% | |
| GCAATCCTCACCTCATAAGC+CGG | - | chr3.1:92295777-92295758 | None:intergenic | 50.0% | |
| TCAGACGTAGGGCAATAGGA+TGG | - | chr3.1:92297260-92297279 | None:intergenic | 50.0% | |
| TCTTTGGGCCACCTGTTATC+AGG | - | chr3.1:92295872-92295891 | None:intergenic | 50.0% | |
| TGGCATGGCACTCAATGACA+TGG | + | chr3.1:92296791-92296810 | MS.gene68203:CDS | 50.0% | |
| TGGCCCAAAGAATCGTGAAG+AGG | + | chr3.1:92295881-92295900 | MS.gene68203:intron | 50.0% | |
| TGTGTAATCCTGAGCGTGAG+GGG | - | chr3.1:92295806-92295825 | None:intergenic | 50.0% | |
| ! | CAAAACCGGCTTATGAGGTG+AGG | + | chr3.1:92295950-92295969 | MS.gene68203:intron | 50.0% |
| ! | CAAAACCGGCTTATGAGGTG+AGG | - | chr3.1:92295969-92295950 | None:intergenic | 50.0% |
| ! | GCAGAGAATGGTGATGCTGA+CGG | + | chr3.1:92295149-92295168 | MS.gene68203:intron | 50.0% |
| ! | GCGTGAACATAAATGACGGG+TGG | + | chr3.1:92295832-92295851 | MS.gene68203:intron | 50.0% |
| ! | TCCCACAAAACCGGCTTATG+AGG | - | chr3.1:92295771-92295790 | None:intergenic | 50.0% |
| ! | TGCATGGGTTGTCATTGGCA+TGG | + | chr3.1:92296776-92296795 | MS.gene68203:CDS | 50.0% |
| !! | ATGCTTTTTGCACCGCTGGA+GGG | - | chr3.1:92296635-92296654 | None:intergenic | 50.0% |
| !! | CACCTCATAAGCCGGTTTTG+TGG | + | chr3.1:92295766-92295785 | MS.gene68203:intron | 50.0% |
| !! | CACCTCATAAGCCGGTTTTG+TGG | - | chr3.1:92295785-92295766 | None:intergenic | 50.0% |
| !! | CCTCATAAGCCGGTTTTGTG+GGG | - | chr3.1:92295787-92295768 | None:intergenic | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | - | chr3.1:92295938-92295957 | None:intergenic | 50.0% |
| !! | TATGCTTTTTGCACCGCTGG+AGG | - | chr3.1:92296636-92296655 | None:intergenic | 50.0% |
| ACTCAATGACATGGCCGCAG+AGG | + | chr3.1:92296800-92296819 | MS.gene68203:CDS | 55.0% | |
| AGGCCAACTCCTAACCGATG+TGG | - | chr3.1:92295708-92295727 | None:intergenic | 55.0% | |
| CGTTCGTCTGAACTGCTTCC+TGG | + | chr3.1:92296699-92296718 | MS.gene68203:CDS | 55.0% | |
| CTCCTCAGACGTAGGGCAAT+AGG | - | chr3.1:92297264-92297283 | None:intergenic | 55.0% | |
| GGCCAACTCCTAACCGATGT+GGG | - | chr3.1:92295707-92295726 | None:intergenic | 55.0% | |
| GTGTAATCCTGAGCGTGAGG+GGG | - | chr3.1:92295805-92295824 | None:intergenic | 55.0% | |
| GTTAGGACCATTGCACCACC+AGG | - | chr3.1:92296720-92296739 | None:intergenic | 55.0% | |
| TCGTCTGAACTGCTTCCTGG+TGG | + | chr3.1:92296702-92296721 | MS.gene68203:CDS | 55.0% | |
| ! | ACTGCTTCCTGGTGGTGCAA+TGG | + | chr3.1:92296710-92296729 | MS.gene68203:CDS | 55.0% |
| ! | CCCCACAAAACCGGCTTATG+AGG | + | chr3.1:92295945-92295964 | MS.gene68203:intron | 55.0% |
| ! | GTCCCACATCGGTTAGGAGT+TGG | + | chr3.1:92295702-92295721 | MS.gene68203:intron | 55.0% |
| ! | GTCCCACATCGGTTAGGAGT+TGG | - | chr3.1:92295721-92295702 | None:intergenic | 55.0% |
| !! | AATGACGGGTGGCCCGATAA+CGG | + | chr3.1:92295843-92295862 | MS.gene68203:intron | 55.0% |
| AACAAGGGCAAGCCCTCCAG+CGG | + | chr3.1:92296620-92296639 | MS.gene68203:CDS | 60.0% | |
| CTGGAGGGCTTGCCCTTGTT+AGG | - | chr3.1:92296620-92296639 | None:intergenic | 60.0% | |
| TAACACACCCCCTCACGCTC+AGG | + | chr3.1:92295795-92295814 | MS.gene68203:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 92294835 | 92297586 | 92294835 | ID=MS.gene68203 |
| chr3.1 | mRNA | 92294835 | 92297586 | 92294835 | ID=MS.gene68203.t1;Parent=MS.gene68203 |
| chr3.1 | exon | 92294835 | 92294909 | 92294835 | ID=MS.gene68203.t1.exon1;Parent=MS.gene68203.t1 |
| chr3.1 | CDS | 92294835 | 92294909 | 92294835 | ID=cds.MS.gene68203.t1;Parent=MS.gene68203.t1 |
| chr3.1 | exon | 92295153 | 92295557 | 92295153 | ID=MS.gene68203.t1.exon2;Parent=MS.gene68203.t1 |
| chr3.1 | CDS | 92295153 | 92295557 | 92295153 | ID=cds.MS.gene68203.t1;Parent=MS.gene68203.t1 |
| chr3.1 | exon | 92296564 | 92296821 | 92296564 | ID=MS.gene68203.t1.exon3;Parent=MS.gene68203.t1 |
| chr3.1 | CDS | 92296564 | 92296821 | 92296564 | ID=cds.MS.gene68203.t1;Parent=MS.gene68203.t1 |
| chr3.1 | exon | 92297218 | 92297586 | 92297218 | ID=MS.gene68203.t1.exon4;Parent=MS.gene68203.t1 |
| chr3.1 | CDS | 92297218 | 92297586 | 92297218 | ID=cds.MS.gene68203.t1;Parent=MS.gene68203.t1 |
| Gene Sequence |
| Protein sequence |
