Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024315.t1 | XP_003624535.1 | 87.2 | 367 | 44 | 2 | 1 | 366 | 1 | 365 | 2.50E-178 | 634.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024315.t1 | Q9AVK0 | 41.6 | 373 | 205 | 5 | 1 | 366 | 1 | 367 | 9.8e-75 | 282.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024315.t1 | G7KYA2 | 87.2 | 367 | 44 | 2 | 1 | 366 | 1 | 365 | 1.8e-178 | 634.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024315 | MS.gene037613 | PPI |
| MS.gene024315 | MS.gene049577 | PPI |
| MS.gene024315 | MS.gene008450 | PPI |
| MS.gene024315 | MS.gene033734 | PPI |
| MS.gene024315 | MS.gene033735 | PPI |
| MS.gene024315 | MS.gene52303 | PPI |
| MS.gene024315 | MS.gene73290 | PPI |
| MS.gene024315 | MS.gene014262 | PPI |
| MS.gene99450 | MS.gene024315 | PPI |
| MS.gene024315 | MS.gene76430 | PPI |
| MS.gene033748 | MS.gene024315 | PPI |
| MS.gene024315 | MS.gene063148 | PPI |
| MS.gene59406 | MS.gene024315 | PPI |
| MS.gene024315 | MS.gene02421 | PPI |
| MS.gene024315 | MS.gene024299 | PPI |
| MS.gene024301 | MS.gene024315 | PPI |
| MS.gene024315 | MS.gene68203 | PPI |
| MS.gene024315 | MS.gene68796 | PPI |
| MS.gene024315 | MS.gene012028 | PPI |
| MS.gene024315 | MS.gene000556 | PPI |
| MS.gene024315 | MS.gene033750 | PPI |
| MS.gene024315 | MS.gene87476 | PPI |
| MS.gene024315 | MS.gene07908 | PPI |
| MS.gene52320 | MS.gene024315 | PPI |
| MS.gene024315 | MS.gene010553 | PPI |
| MS.gene024315 | MS.gene024314 | PPI |
| MS.gene024315 | MS.gene73369 | PPI |
| MS.gene68796 | MS.gene024315 | PPI |
| MS.gene024315 | MS.gene25135 | PPI |
| MS.gene64697 | MS.gene024315 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024315.t1 | MTR_7g084620 | 87.193 | 367 | 44 | 2 | 1 | 366 | 1 | 365 | 0.0 | 656 |
| MS.gene024315.t1 | MTR_3g467560 | 78.202 | 367 | 73 | 3 | 1 | 364 | 25 | 387 | 0.0 | 579 |
| MS.gene024315.t1 | MTR_7g084330 | 79.009 | 343 | 54 | 3 | 25 | 366 | 8 | 333 | 0.0 | 540 |
| MS.gene024315.t1 | MTR_7g084350 | 69.399 | 366 | 107 | 3 | 4 | 366 | 2 | 365 | 0.0 | 527 |
| MS.gene024315.t1 | MTR_3g117060 | 53.333 | 375 | 156 | 7 | 1 | 364 | 1 | 367 | 2.82e-133 | 385 |
| MS.gene024315.t1 | MTR_8g077040 | 41.470 | 381 | 197 | 8 | 1 | 366 | 1 | 370 | 9.90e-99 | 297 |
| MS.gene024315.t1 | MTR_8g076900 | 44.086 | 372 | 188 | 8 | 1 | 364 | 1 | 360 | 9.22e-98 | 295 |
| MS.gene024315.t1 | MTR_5g020940 | 42.895 | 380 | 190 | 8 | 1 | 364 | 11 | 379 | 8.15e-97 | 293 |
| MS.gene024315.t1 | MTR_4g018820 | 41.600 | 375 | 190 | 9 | 1 | 364 | 1 | 357 | 9.98e-92 | 279 |
| MS.gene024315.t1 | MTR_3g467270 | 39.733 | 375 | 200 | 8 | 7 | 366 | 6 | 369 | 2.61e-90 | 276 |
| MS.gene024315.t1 | MTR_6g056070 | 40.741 | 378 | 191 | 9 | 1 | 366 | 1 | 357 | 6.84e-90 | 274 |
| MS.gene024315.t1 | MTR_1g022465 | 43.717 | 382 | 191 | 7 | 1 | 364 | 1 | 376 | 9.98e-87 | 267 |
| MS.gene024315.t1 | MTR_1g022455 | 42.632 | 380 | 199 | 5 | 1 | 364 | 1 | 377 | 1.99e-85 | 264 |
| MS.gene024315.t1 | MTR_8g020700 | 39.189 | 370 | 194 | 8 | 6 | 364 | 6 | 355 | 3.18e-81 | 252 |
| MS.gene024315.t1 | MTR_5g046110 | 41.223 | 376 | 193 | 9 | 1 | 364 | 61 | 420 | 5.86e-81 | 253 |
| MS.gene024315.t1 | MTR_8g020690 | 39.683 | 378 | 194 | 10 | 1 | 364 | 1 | 358 | 4.90e-80 | 249 |
| MS.gene024315.t1 | MTR_8g076900 | 49.407 | 253 | 112 | 7 | 1 | 245 | 1 | 245 | 8.78e-71 | 222 |
| MS.gene024315.t1 | MTR_3g054330 | 35.142 | 387 | 211 | 11 | 1 | 363 | 10 | 380 | 5.51e-64 | 208 |
| MS.gene024315.t1 | MTR_5g093900 | 34.545 | 385 | 216 | 11 | 4 | 363 | 16 | 389 | 1.39e-62 | 205 |
| MS.gene024315.t1 | MTR_3g052700 | 33.681 | 383 | 220 | 10 | 4 | 363 | 16 | 387 | 5.65e-62 | 203 |
| MS.gene024315.t1 | MTR_8g020700 | 43.952 | 248 | 124 | 6 | 6 | 245 | 6 | 246 | 3.80e-57 | 187 |
| MS.gene024315.t1 | MTR_7g084340 | 69.748 | 119 | 36 | 0 | 246 | 364 | 11 | 129 | 5.04e-53 | 172 |
| MS.gene024315.t1 | MTR_1g108660 | 33.544 | 316 | 171 | 8 | 55 | 359 | 42 | 329 | 5.21e-52 | 176 |
| MS.gene024315.t1 | MTR_8g077030 | 42.241 | 232 | 100 | 5 | 1 | 228 | 1 | 202 | 4.30e-45 | 162 |
| MS.gene024315.t1 | MTR_6g015620 | 48.031 | 127 | 61 | 2 | 241 | 364 | 12 | 136 | 5.75e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024315.t1 | AT5G66430 | 43.429 | 350 | 171 | 8 | 9 | 346 | 1 | 335 | 1.28e-86 | 266 |
| MS.gene024315.t1 | AT3G11480 | 42.975 | 363 | 189 | 5 | 7 | 364 | 29 | 378 | 9.25e-85 | 262 |
| MS.gene024315.t1 | AT5G04370 | 42.424 | 363 | 192 | 7 | 7 | 364 | 39 | 389 | 1.14e-83 | 259 |
| MS.gene024315.t1 | AT5G04370 | 42.424 | 363 | 192 | 7 | 7 | 364 | 58 | 408 | 1.52e-83 | 260 |
| MS.gene024315.t1 | AT5G04370 | 42.077 | 366 | 189 | 8 | 7 | 364 | 44 | 394 | 1.84e-83 | 259 |
| MS.gene024315.t1 | AT5G38020 | 41.026 | 351 | 184 | 7 | 5 | 341 | 2 | 343 | 2.67e-82 | 255 |
| MS.gene024315.t1 | AT1G19640 | 40.209 | 383 | 204 | 6 | 6 | 364 | 6 | 387 | 1.61e-81 | 254 |
| MS.gene024315.t1 | AT3G21950 | 38.764 | 356 | 195 | 6 | 5 | 346 | 2 | 348 | 3.98e-77 | 242 |
| MS.gene024315.t1 | AT2G14060 | 37.430 | 358 | 195 | 5 | 7 | 350 | 12 | 354 | 4.08e-75 | 237 |
| MS.gene024315.t1 | AT5G04380 | 40.058 | 347 | 193 | 6 | 5 | 346 | 34 | 370 | 1.58e-74 | 236 |
| MS.gene024315.t1 | AT4G36470 | 38.196 | 377 | 203 | 10 | 4 | 364 | 7 | 369 | 3.20e-73 | 232 |
| MS.gene024315.t1 | AT5G38020 | 41.967 | 305 | 154 | 7 | 51 | 341 | 9 | 304 | 3.26e-72 | 228 |
| MS.gene024315.t1 | AT3G21950 | 35.825 | 388 | 194 | 7 | 5 | 346 | 2 | 380 | 2.90e-70 | 225 |
| MS.gene024315.t1 | AT5G04380 | 39.193 | 347 | 189 | 7 | 5 | 346 | 30 | 359 | 8.09e-70 | 223 |
| MS.gene024315.t1 | AT5G04380 | 41.333 | 300 | 161 | 6 | 52 | 346 | 10 | 299 | 2.59e-68 | 218 |
| MS.gene024315.t1 | AT5G55250 | 34.555 | 382 | 221 | 10 | 1 | 363 | 13 | 384 | 5.76e-61 | 201 |
| MS.gene024315.t1 | AT1G15125 | 33.607 | 366 | 206 | 12 | 9 | 361 | 1 | 342 | 2.14e-59 | 196 |
| MS.gene024315.t1 | AT2G14060 | 43.694 | 222 | 119 | 2 | 7 | 228 | 12 | 227 | 1.62e-58 | 190 |
| MS.gene024315.t1 | AT5G38780 | 34.783 | 368 | 190 | 13 | 9 | 354 | 10 | 349 | 2.71e-55 | 185 |
| MS.gene024315.t1 | AT5G37970 | 34.857 | 350 | 190 | 11 | 9 | 342 | 10 | 337 | 1.07e-54 | 184 |
| MS.gene024315.t1 | AT5G55250 | 34.462 | 325 | 185 | 9 | 57 | 363 | 32 | 346 | 2.69e-53 | 180 |
| MS.gene024315.t1 | AT1G68040 | 32.258 | 372 | 210 | 13 | 7 | 361 | 11 | 357 | 6.88e-52 | 176 |
| MS.gene024315.t1 | AT5G38780 | 35.294 | 323 | 165 | 11 | 45 | 351 | 3 | 297 | 9.75e-52 | 174 |
| MS.gene024315.t1 | AT5G37990 | 33.048 | 351 | 195 | 11 | 9 | 342 | 10 | 337 | 2.47e-51 | 175 |
| MS.gene024315.t1 | AT5G38100 | 32.877 | 365 | 199 | 12 | 6 | 351 | 7 | 344 | 2.28e-49 | 170 |
| MS.gene024315.t1 | AT4G26420 | 30.899 | 356 | 216 | 10 | 4 | 341 | 8 | 351 | 2.31e-47 | 165 |
| MS.gene024315.t1 | AT5G38100 | 33.962 | 318 | 172 | 10 | 48 | 351 | 28 | 321 | 2.41e-46 | 161 |
| MS.gene024315.t1 | AT5G56300 | 29.919 | 371 | 236 | 9 | 6 | 361 | 21 | 382 | 3.34e-45 | 159 |
| MS.gene024315.t1 | AT3G44860 | 31.124 | 347 | 208 | 9 | 9 | 348 | 7 | 329 | 2.35e-44 | 156 |
| MS.gene024315.t1 | AT3G44870 | 33.808 | 281 | 168 | 5 | 9 | 284 | 7 | 274 | 5.65e-43 | 153 |
| MS.gene024315.t1 | AT1G15125 | 35.714 | 252 | 137 | 9 | 9 | 248 | 1 | 239 | 5.37e-41 | 145 |
| MS.gene024315.t1 | AT3G44840 | 29.310 | 348 | 213 | 9 | 9 | 348 | 7 | 329 | 1.95e-39 | 143 |
| MS.gene024315.t1 | AT1G66700 | 28.198 | 344 | 203 | 9 | 9 | 337 | 9 | 323 | 1.22e-35 | 133 |
| MS.gene024315.t1 | AT1G66720 | 29.240 | 342 | 201 | 9 | 9 | 337 | 9 | 322 | 1.59e-35 | 133 |
| MS.gene024315.t1 | AT1G66690 | 29.532 | 342 | 201 | 9 | 9 | 337 | 9 | 323 | 4.52e-34 | 129 |
| MS.gene024315.t1 | AT4G26420 | 32.751 | 229 | 136 | 7 | 4 | 224 | 8 | 226 | 5.65e-32 | 121 |
| MS.gene024315.t1 | AT5G38100 | 34.842 | 221 | 124 | 6 | 6 | 217 | 7 | 216 | 1.55e-31 | 120 |
| MS.gene024315.t1 | AT5G38100 | 34.842 | 221 | 124 | 6 | 6 | 217 | 7 | 216 | 1.69e-31 | 119 |
| MS.gene024315.t1 | AT4G26420 | 31.963 | 219 | 141 | 4 | 9 | 224 | 1 | 214 | 9.10e-31 | 118 |
| MS.gene024315.t1 | AT1G66700 | 30.986 | 213 | 132 | 4 | 9 | 217 | 9 | 210 | 4.26e-25 | 102 |
Find 72 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTTGGCCAAATCTTTC+GGG | 0.108259 | 7.1:-20533499 | None:intergenic |
| GTTAAGTGTTTCTGCATTCT+TGG | 0.168794 | 7.1:-20533513 | None:intergenic |
| GAGATGGCCATTAGGGTATT+TGG | 0.227439 | 7.1:-20532269 | None:intergenic |
| GCATTCTTGGCCAAATCTTT+CGG | 0.235226 | 7.1:-20533500 | None:intergenic |
| TATAATATCTTCTTCGAGTA+TGG | 0.240425 | 7.1:-20532180 | None:intergenic |
| GCCGATTTAGGTTGCTCTTC+AGG | 0.273089 | 7.1:+20532245 | MS.gene024315:CDS |
| TGTTGGAAAATAGCCGATTT+AGG | 0.282589 | 7.1:+20532233 | MS.gene024315:CDS |
| TTACCATCTTCAAGGATTCT+TGG | 0.285721 | 7.1:-20535590 | None:intergenic |
| ACATTGAAGACATTTAAAAT+AGG | 0.346604 | 7.1:+20535346 | MS.gene024315:CDS |
| TTGAGATAAATTTGAAATAC+AGG | 0.352883 | 7.1:-20532347 | None:intergenic |
| TAATCAGGCCCCGAAAGATT+TGG | 0.362295 | 7.1:+20533490 | MS.gene024315:intron |
| AGATATTAGAGATGGCCATT+AGG | 0.374134 | 7.1:-20532277 | None:intergenic |
| CAGTCTTCATTGGCTTTCTC+AGG | 0.375096 | 7.1:+20532535 | MS.gene024315:CDS |
| TGTGCAGAGAAAGGTGATAA+TGG | 0.392376 | 7.1:+20532148 | MS.gene024315:intron |
| ATTTCTGTTCAAGGGGTACT+TGG | 0.401639 | 7.1:+20533704 | MS.gene024315:CDS |
| AATGATATTATTTCTGTTCA+AGG | 0.404878 | 7.1:+20533695 | MS.gene024315:CDS |
| GATATTAGAGATGGCCATTA+GGG | 0.407082 | 7.1:-20532276 | None:intergenic |
| ATTCCTCATACAGTCTTCAT+TGG | 0.412187 | 7.1:+20532525 | MS.gene024315:CDS |
| TCCTGAAGAGCAACCTAAAT+CGG | 0.412207 | 7.1:-20532246 | None:intergenic |
| GAAGACATTTAAAATAGGTT+GGG | 0.417297 | 7.1:+20535351 | MS.gene024315:CDS |
| AATCAACAATATCTTGTTGA+AGG | 0.417334 | 7.1:-20535381 | None:intergenic |
| TGAAGACATTTAAAATAGGT+TGG | 0.420811 | 7.1:+20535350 | MS.gene024315:CDS |
| ATGATATTATTTCTGTTCAA+GGG | 0.445260 | 7.1:+20533696 | MS.gene024315:CDS |
| CCAAATCTGGCTATTAAAAG+AGG | 0.453106 | 7.1:-20535466 | None:intergenic |
| ATGATGGTACTAACATTTAT+CGG | 0.463477 | 7.1:+20533659 | MS.gene024315:CDS |
| TTCAGGACCAAATACCCTAA+TGG | 0.464358 | 7.1:+20532262 | MS.gene024315:CDS |
| ACAAAAGTGCAATGGGTTGT+TGG | 0.472542 | 7.1:+20532216 | MS.gene024315:CDS |
| CTAGTTTGAAGTTAAACAAA+GGG | 0.491837 | 7.1:+20532318 | MS.gene024315:CDS |
| AAAATCATATACCTGGAGTA+AGG | 0.493751 | 7.1:-20529437 | None:intergenic |
| GTGCCCAACAAAAGTGCAAT+GGG | 0.498690 | 7.1:+20532209 | MS.gene024315:CDS |
| AAGCCAATGAAGACTGTATG+AGG | 0.503943 | 7.1:-20532528 | None:intergenic |
| TGTTCAAGGGGTACTTGGCA+TGG | 0.504276 | 7.1:+20533709 | MS.gene024315:CDS |
| TAAATGTCTTCAATGTTTGA+AGG | 0.506144 | 7.1:-20535339 | None:intergenic |
| AAATATGCTTCATAAACTGA+TGG | 0.509785 | 7.1:-20533569 | None:intergenic |
| AAATGTCTTCAATGTTTGAA+GGG | 0.509927 | 7.1:-20535338 | None:intergenic |
| TCATGGATGAATTGTTCTCA+AGG | 0.510601 | 7.1:+20535497 | MS.gene024315:CDS |
| TACTGTTGAGGAAGTAAGAC+AGG | 0.511024 | 7.1:+20535291 | MS.gene024315:CDS |
| TTTGTAGGGTTTGGTTGAAG+AGG | 0.514824 | 7.1:+20535231 | MS.gene024315:intron |
| TTCTTAATTATGGCAACGGA+AGG | 0.521494 | 7.1:+20529364 | None:intergenic |
| GGAAGGAATGCTTCACATGA+AGG | 0.534044 | 7.1:+20529381 | MS.gene024315:CDS |
| TAATTTCTTAATTATGGCAA+CGG | 0.535285 | 7.1:+20529360 | None:intergenic |
| CTCAACAGTAGGATGATATG+TGG | 0.539528 | 7.1:-20535278 | None:intergenic |
| TGTAAATAACTCCTTACTCC+AGG | 0.547946 | 7.1:+20529426 | MS.gene024315:CDS |
| ATTAGCATCGAATGGTATGA+TGG | 0.554499 | 7.1:+20533643 | MS.gene024315:CDS |
| TCAACAGTAGGATGATATGT+GGG | 0.562614 | 7.1:-20535277 | None:intergenic |
| CAGATTTGGAGAAAATATCA+TGG | 0.571761 | 7.1:+20535480 | MS.gene024315:CDS |
| TGATATTATTTCTGTTCAAG+GGG | 0.576391 | 7.1:+20533697 | MS.gene024315:CDS |
| ACTCATTGAGATGGAGACAT+TGG | 0.577452 | 7.1:+20535540 | MS.gene024315:CDS |
| GAATGCAGAAACACTTAACA+AGG | 0.577711 | 7.1:+20533517 | MS.gene024315:CDS |
| GACAACACAACTCATTGAGA+TGG | 0.578054 | 7.1:+20535531 | MS.gene024315:CDS |
| CACATATCATCCTACTGTTG+AGG | 0.578441 | 7.1:+20535279 | MS.gene024315:CDS |
| TTGTTGATAGCAAAACGAGA+GGG | 0.582462 | 7.1:+20535407 | MS.gene024315:CDS |
| TTTGAGGAATTAGCATCGAA+TGG | 0.583239 | 7.1:+20533635 | MS.gene024315:CDS |
| AGACAGGTGATTGAAGCAGA+AGG | 0.584107 | 7.1:+20535307 | MS.gene024315:CDS |
| AGTGCCCAACAAAAGTGCAA+TGG | 0.589666 | 7.1:+20532208 | MS.gene024315:CDS |
| ACTAGTTTGAAGTTAAACAA+AGG | 0.591472 | 7.1:+20532317 | MS.gene024315:CDS |
| GATGTTCAAGATATTAGAGA+TGG | 0.597112 | 7.1:-20532285 | None:intergenic |
| CTTCACATGAAGGGTGGTGT+GGG | 0.598798 | 7.1:+20529391 | MS.gene024315:CDS |
| GCTTCACATGAAGGGTGGTG+TGG | 0.599473 | 7.1:+20529390 | MS.gene024315:CDS |
| ATTCTTGGCCAAATCTTTCG+GGG | 0.600290 | 7.1:-20533498 | None:intergenic |
| TGTCTTACTTCCTCAACAGT+AGG | 0.600903 | 7.1:-20535289 | None:intergenic |
| TATGCTTCATAAACTGATGG+AGG | 0.608561 | 7.1:-20533566 | None:intergenic |
| GACAGGTGATTGAAGCAGAA+GGG | 0.625798 | 7.1:+20535308 | MS.gene024315:CDS |
| GAAGGAATGCTTCACATGAA+GGG | 0.627730 | 7.1:+20529382 | MS.gene024315:CDS |
| TGGCATGGTACTCAACGAGA+TGG | 0.637697 | 7.1:+20533724 | MS.gene024315:CDS |
| TACTTCATAAGTGCAACACC+AGG | 0.650129 | 7.1:+20532455 | MS.gene024315:CDS |
| GTTGTTGATAGCAAAACGAG+AGG | 0.663209 | 7.1:+20535406 | MS.gene024315:CDS |
| CAACAGTAGGATGATATGTG+GGG | 0.669631 | 7.1:-20535276 | None:intergenic |
| GGAATGCTTCACATGAAGGG+TGG | 0.674880 | 7.1:+20529385 | MS.gene024315:CDS |
| TGTTGATAGCAAAACGAGAG+GGG | 0.696212 | 7.1:+20535408 | MS.gene024315:CDS |
| AATGCAGAAACACTTAACAA+GGG | 0.705031 | 7.1:+20533518 | MS.gene024315:CDS |
| ACTCAACGAGATGGTCCAAG+AGG | 0.710119 | 7.1:+20533733 | MS.gene024315:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATACATAAAGTAT+AGG | - | chr7.1:20529686-20529705 | None:intergenic | 10.0% |
| !! | AAAGATATCTAATATTAAAA+AGG | - | chr7.1:20529826-20529845 | None:intergenic | 10.0% |
| !! | AGTTCTATAATAAAAAAAAA+AGG | - | chr7.1:20529849-20529868 | None:intergenic | 10.0% |
| !! | ATAATAATGTATATATTGAT+CGG | - | chr7.1:20531707-20531726 | None:intergenic | 10.0% |
| !! | TAACTTATATTATATTTGAA+CGG | + | chr7.1:20534651-20534670 | MS.gene024315:intron | 10.0% |
| !!! | CTAATTTTTATTTTTTTTAG+AGG | + | chr7.1:20533989-20534008 | MS.gene024315:intron | 10.0% |
| !!! | GTGTTTAATTTTTTAATATA+TGG | - | chr7.1:20533781-20533800 | None:intergenic | 10.0% |
| !!! | TATGAAAATTTAATTTTACA+AGG | + | chr7.1:20531950-20531969 | MS.gene024315:intron | 10.0% |
| !!! | TTACATTTCTTTATATATTT+TGG | + | chr7.1:20534929-20534948 | MS.gene024315:intron | 10.0% |
| !! | AATTATTGTAAAAGGAAAAT+AGG | - | chr7.1:20533861-20533880 | None:intergenic | 15.0% |
| !! | ATAAAATATATATGAGTGTA+TGG | + | chr7.1:20531403-20531422 | MS.gene024315:intron | 15.0% |
| !! | ATGATTTACAAGTTAAAATT+GGG | - | chr7.1:20532575-20532594 | None:intergenic | 15.0% |
| !! | ATTATTGTAAAAGGAAAATA+GGG | - | chr7.1:20533860-20533879 | None:intergenic | 15.0% |
| !! | CATAAATGACAAAAAAAATT+GGG | + | chr7.1:20530894-20530913 | MS.gene024315:intron | 15.0% |
| !! | CTATTCAAAATTATTGTAAA+AGG | - | chr7.1:20533869-20533888 | None:intergenic | 15.0% |
| !! | TAGTATTAATATTGTATTTC+TGG | + | chr7.1:20529546-20529565 | MS.gene024315:intron | 15.0% |
| !! | TATCTAATATTAAAAAGGTA+AGG | - | chr7.1:20529821-20529840 | None:intergenic | 15.0% |
| !! | TATGATTTACAAGTTAAAAT+TGG | - | chr7.1:20532576-20532595 | None:intergenic | 15.0% |
| !! | TCATAAATGACAAAAAAAAT+TGG | + | chr7.1:20530893-20530912 | MS.gene024315:intron | 15.0% |
| !! | TTCAAAAATGATATAAAGTA+GGG | - | chr7.1:20531126-20531145 | None:intergenic | 15.0% |
| !! | TTCTATCATAAACTAAATAT+TGG | + | chr7.1:20535100-20535119 | MS.gene024315:intron | 15.0% |
| !! | TTTAGATTAAACAAATTAGA+AGG | - | chr7.1:20534021-20534040 | None:intergenic | 15.0% |
| !! | TTTCAAAAATGATATAAAGT+AGG | - | chr7.1:20531127-20531146 | None:intergenic | 15.0% |
| !!! | AAATATAATTTCTAGTGTAT+TGG | - | chr7.1:20529492-20529511 | None:intergenic | 15.0% |
| !!! | AACATTTATTTTAAATACCA+TGG | + | chr7.1:20530208-20530227 | MS.gene024315:intron | 15.0% |
| !!! | ACATTAATTATGATTTTTCA+CGG | + | chr7.1:20531529-20531548 | MS.gene024315:intron | 15.0% |
| !!! | GACTATATATTAATTTTTTG+AGG | + | chr7.1:20531278-20531297 | MS.gene024315:intron | 15.0% |
| !!! | GTTTTATCAAATTTTATTTC+CGG | + | chr7.1:20530044-20530063 | MS.gene024315:intron | 15.0% |
| !!! | TATATTAATTTTTTGAGGAA+TGG | + | chr7.1:20531283-20531302 | MS.gene024315:intron | 15.0% |
| !!! | TATCTTTTATTTGTTATACA+AGG | - | chr7.1:20535161-20535180 | None:intergenic | 15.0% |
| !!! | TTACAATTTTCTTTTATTCT+TGG | + | chr7.1:20531094-20531113 | MS.gene024315:intron | 15.0% |
| !!! | TTTTATCAAATTTTATTTCC+GGG | + | chr7.1:20530045-20530064 | MS.gene024315:intron | 15.0% |
| !!! | TTTTTATTATAGAACTAACT+GGG | + | chr7.1:20529853-20529872 | MS.gene024315:intron | 15.0% |
| !!! | TTTTTTATTATAGAACTAAC+TGG | + | chr7.1:20529852-20529871 | MS.gene024315:intron | 15.0% |
| !! | AAAAAGTCGATGTAATTATT+TGG | - | chr7.1:20532503-20532522 | None:intergenic | 20.0% |
| !! | AAAATATAGTTAGAGTTACT+AGG | - | chr7.1:20532773-20532792 | None:intergenic | 20.0% |
| !! | AAGAAGTTTATGAATCAAAT+TGG | + | chr7.1:20532982-20533001 | MS.gene024315:intron | 20.0% |
| !! | ACATGAATTTAATATTGGAT+AGG | - | chr7.1:20530654-20530673 | None:intergenic | 20.0% |
| !! | AGAAGTTTATGAATCAAATT+GGG | + | chr7.1:20532983-20533002 | MS.gene024315:intron | 20.0% |
| !! | ATATACATAAAGTATAGGTT+AGG | - | chr7.1:20529681-20529700 | None:intergenic | 20.0% |
| !! | CAAATAATGTCTCATAAATA+TGG | - | chr7.1:20533246-20533265 | None:intergenic | 20.0% |
| !! | CTTCAAAATGAAAACATTAT+CGG | + | chr7.1:20533800-20533819 | MS.gene024315:intron | 20.0% |
| !! | GTTGAGAATAAAAGAAATTT+CGG | - | chr7.1:20534203-20534222 | None:intergenic | 20.0% |
| !! | TATCCAATATTAAATTCATG+TGG | + | chr7.1:20530653-20530672 | MS.gene024315:intron | 20.0% |
| !! | TGAAATCATTAAAAACAGTA+AGG | + | chr7.1:20534315-20534334 | MS.gene024315:intron | 20.0% |
| !! | TTCTTCTTCTATAAATGTAA+CGG | + | chr7.1:20531919-20531938 | MS.gene024315:intron | 20.0% |
| !!! | AAAGGTATAAAAATATGCTA+TGG | - | chr7.1:20534096-20534115 | None:intergenic | 20.0% |
| !!! | AAGATTCCTTATAATTTGTA+GGG | + | chr7.1:20535217-20535236 | MS.gene024315:intron | 20.0% |
| !!! | AAGGTTATTTTAGTCATTTT+GGG | + | chr7.1:20531969-20531988 | MS.gene024315:intron | 20.0% |
| !!! | AATGATATTATTTCTGTTCA+AGG | + | chr7.1:20533695-20533714 | MS.gene024315:CDS | 20.0% |
| !!! | ACATTGAAGACATTTAAAAT+AGG | + | chr7.1:20535346-20535365 | MS.gene024315:CDS | 20.0% |
| !!! | ACCAATTCAATTATTTTGAA+GGG | - | chr7.1:20534384-20534403 | None:intergenic | 20.0% |
| !!! | ATCTCACTGTATTTTTTTTA+CGG | + | chr7.1:20531447-20531466 | MS.gene024315:intron | 20.0% |
| !!! | ATCTGAAGTTAATTCTTTTA+TGG | + | chr7.1:20533464-20533483 | MS.gene024315:intron | 20.0% |
| !!! | ATGAGTATATGTTTGTTTTA+CGG | + | chr7.1:20531329-20531348 | MS.gene024315:intron | 20.0% |
| !!! | ATGATATTATTTCTGTTCAA+GGG | + | chr7.1:20533696-20533715 | MS.gene024315:CDS | 20.0% |
| !!! | CACTAGAAATTATATTTTGT+CGG | + | chr7.1:20529495-20529514 | MS.gene024315:intron | 20.0% |
| !!! | CATTAATTATGATTTTTCAC+GGG | + | chr7.1:20531530-20531549 | MS.gene024315:intron | 20.0% |
| !!! | GTTTAACTTTTGTTTTCAAA+TGG | - | chr7.1:20530713-20530732 | None:intergenic | 20.0% |
| !!! | TAAGATTCCTTATAATTTGT+AGG | + | chr7.1:20535216-20535235 | MS.gene024315:intron | 20.0% |
| !!! | TCATTCTTACTACTTTTTTT+AGG | - | chr7.1:20532945-20532964 | None:intergenic | 20.0% |
| !!! | TCTATTTTTAAGATGAATTG+TGG | + | chr7.1:20530336-20530355 | MS.gene024315:intron | 20.0% |
| !!! | TCTTATTTCTGAAATCTAAT+GGG | + | chr7.1:20531368-20531387 | MS.gene024315:intron | 20.0% |
| !!! | TTCTTATTTCTGAAATCTAA+TGG | + | chr7.1:20531367-20531386 | MS.gene024315:intron | 20.0% |
| !!! | TTGAGATAAATTTGAAATAC+AGG | - | chr7.1:20532350-20532369 | None:intergenic | 20.0% |
| ! | AAAATTAGAAGGTGAAGATT+TGG | - | chr7.1:20533977-20533996 | None:intergenic | 25.0% |
| ! | AAAGAAGAAAATCATATACC+TGG | - | chr7.1:20529447-20529466 | None:intergenic | 25.0% |
| ! | AAATATGCTTCATAAACTGA+TGG | - | chr7.1:20533572-20533591 | None:intergenic | 25.0% |
| ! | AAATCTATGTGTAACTATCA+TGG | + | chr7.1:20530143-20530162 | MS.gene024315:intron | 25.0% |
| ! | AAATGTCTTCAATGTTTGAA+GGG | - | chr7.1:20535341-20535360 | None:intergenic | 25.0% |
| ! | AAGTTTGAATAAAGCAACAA+AGG | - | chr7.1:20534114-20534133 | None:intergenic | 25.0% |
| ! | AATACGACTAGACATAAATA+TGG | - | chr7.1:20533384-20533403 | None:intergenic | 25.0% |
| ! | AATCAACAATATCTTGTTGA+AGG | - | chr7.1:20535384-20535403 | None:intergenic | 25.0% |
| ! | AATTAAGATCTATTGTCACA+AGG | + | chr7.1:20533931-20533950 | MS.gene024315:intron | 25.0% |
| ! | ACCCTTCAAAATAATTGAAT+TGG | + | chr7.1:20534380-20534399 | MS.gene024315:intron | 25.0% |
| ! | AGAAATAGAAGATTCTCATA+AGG | - | chr7.1:20534069-20534088 | None:intergenic | 25.0% |
| ! | AGATTAAACAAATTAGAAGG+TGG | - | chr7.1:20534018-20534037 | None:intergenic | 25.0% |
| ! | AGTTAAAATCTGTTGATCTT+AGG | - | chr7.1:20534636-20534655 | None:intergenic | 25.0% |
| ! | ATCAAATTGGGTAATAGTTA+AGG | + | chr7.1:20532995-20533014 | MS.gene024315:intron | 25.0% |
| ! | ATGCCACATGAATTTAATAT+TGG | - | chr7.1:20530659-20530678 | None:intergenic | 25.0% |
| ! | ATTAGACGAAATCTATTTCA+TGG | + | chr7.1:20532008-20532027 | MS.gene024315:intron | 25.0% |
| ! | CAAAAAAAATTGGGTCAAAT+CGG | + | chr7.1:20530903-20530922 | MS.gene024315:intron | 25.0% |
| ! | CTTCAAAATAATTGAATTGG+TGG | + | chr7.1:20534383-20534402 | MS.gene024315:intron | 25.0% |
| ! | CTTTGGATTAAATAAACAGA+CGG | + | chr7.1:20534579-20534598 | MS.gene024315:intron | 25.0% |
| ! | GATTGATATCATAAGAACAT+TGG | + | chr7.1:20530943-20530962 | MS.gene024315:intron | 25.0% |
| ! | GATTTCTACCAACAAAAAAA+AGG | + | chr7.1:20532416-20532435 | MS.gene024315:CDS | 25.0% |
| ! | GTAATATGTTACTATGTTAG+TGG | - | chr7.1:20530750-20530769 | None:intergenic | 25.0% |
| ! | TAAAGTTGGATTGTCAATTT+AGG | - | chr7.1:20530465-20530484 | None:intergenic | 25.0% |
| ! | TAAATGTCTTCAATGTTTGA+AGG | - | chr7.1:20535342-20535361 | None:intergenic | 25.0% |
| ! | TATAATATCTTCTTCGAGTA+TGG | - | chr7.1:20532183-20532202 | None:intergenic | 25.0% |
| ! | TCTTAATTGAGATGTCATAA+TGG | - | chr7.1:20533919-20533938 | None:intergenic | 25.0% |
| ! | TTAAAATATATGTGGGTGTA+TGG | + | chr7.1:20531256-20531275 | MS.gene024315:intron | 25.0% |
| ! | TTTCAAATGGAAGATTAGAT+TGG | - | chr7.1:20530700-20530719 | None:intergenic | 25.0% |
| !! | AATTTTCCTAAAGAAAAGAG+TGG | + | chr7.1:20530093-20530112 | MS.gene024315:intron | 25.0% |
| !! | AATTTTGAATAGAGCAACAA+AGG | + | chr7.1:20533877-20533896 | MS.gene024315:intron | 25.0% |
| !! | ACTAGTTTGAAGTTAAACAA+AGG | + | chr7.1:20532317-20532336 | MS.gene024315:CDS | 25.0% |
| !! | ATTCTTTTATGGCATTAATC+AGG | + | chr7.1:20533475-20533494 | MS.gene024315:intron | 25.0% |
| !! | ATTTTCCTAAAGAAAAGAGT+GGG | + | chr7.1:20530094-20530113 | MS.gene024315:intron | 25.0% |
| !! | CTAGTTTGAAGTTAAACAAA+GGG | + | chr7.1:20532318-20532337 | MS.gene024315:CDS | 25.0% |
| !! | GAAGACATTTAAAATAGGTT+GGG | + | chr7.1:20535351-20535370 | MS.gene024315:CDS | 25.0% |
| !! | GTTTAGAATTAGAAACACTT+TGG | + | chr7.1:20531872-20531891 | MS.gene024315:intron | 25.0% |
| !! | TAGTGTATTGGTAAATAACT+AGG | - | chr7.1:20529480-20529499 | None:intergenic | 25.0% |
| !! | TATTAATTTTGTGCAGAGAA+AGG | + | chr7.1:20532139-20532158 | MS.gene024315:intron | 25.0% |
| !! | TGAAGACATTTAAAATAGGT+TGG | + | chr7.1:20535350-20535369 | MS.gene024315:CDS | 25.0% |
| !! | TGGACAGAAGAATAAATTTT+CGG | + | chr7.1:20533090-20533109 | MS.gene024315:intron | 25.0% |
| !!! | ATATGCATTTTTAGTTTGTG+AGG | - | chr7.1:20532804-20532823 | None:intergenic | 25.0% |
| !!! | CAAGGTTATTTTAGTCATTT+TGG | + | chr7.1:20531968-20531987 | MS.gene024315:intron | 25.0% |
| !!! | CACCAATTCAATTATTTTGA+AGG | - | chr7.1:20534385-20534404 | None:intergenic | 25.0% |
| !!! | TATGCATTTTTAGTTTGTGA+GGG | - | chr7.1:20532803-20532822 | None:intergenic | 25.0% |
| !!! | TCTCACTGTATTTTTTTTAC+GGG | + | chr7.1:20531448-20531467 | MS.gene024315:intron | 25.0% |
| !!! | TGAGTATATGTTTGTTTTAC+GGG | + | chr7.1:20531330-20531349 | MS.gene024315:intron | 25.0% |
| !!! | TGATATTATTTCTGTTCAAG+GGG | + | chr7.1:20533697-20533716 | MS.gene024315:CDS | 25.0% |
| !!! | TTTTTTTGTTGGTAGAAATC+AGG | - | chr7.1:20532416-20532435 | None:intergenic | 25.0% |
| AAAATCATATACCTGGAGTA+AGG | - | chr7.1:20529440-20529459 | None:intergenic | 30.0% | |
| AACCTTATGTAATTACCTCT+TGG | - | chr7.1:20533751-20533770 | None:intergenic | 30.0% | |
| AATCAATATTCGTACGTTTC+TGG | - | chr7.1:20530622-20530641 | None:intergenic | 30.0% | |
| AATGCAGAAACACTTAACAA+GGG | + | chr7.1:20533518-20533537 | MS.gene024315:CDS | 30.0% | |
| AATTAGAAACACTTTGGATG+TGG | + | chr7.1:20531878-20531897 | MS.gene024315:intron | 30.0% | |
| ACCAAACCCTACAAATTATA+AGG | - | chr7.1:20535226-20535245 | None:intergenic | 30.0% | |
| AGTACAGAAAAATCCCAATT+GGG | + | chr7.1:20534412-20534431 | MS.gene024315:intron | 30.0% | |
| ATCAATATTCGTACGTTTCT+GGG | - | chr7.1:20530621-20530640 | None:intergenic | 30.0% | |
| ATGTGATTGAGATACATTTC+TGG | - | chr7.1:20530593-20530612 | None:intergenic | 30.0% | |
| ATTCACGTCAAGTATAAAGT+TGG | - | chr7.1:20530479-20530498 | None:intergenic | 30.0% | |
| ATTGGTAAATAACTAGGTTG+AGG | - | chr7.1:20529474-20529493 | None:intergenic | 30.0% | |
| CAAAAAAAAGGAGAGAATCT+TGG | + | chr7.1:20532428-20532447 | MS.gene024315:CDS | 30.0% | |
| CAAAATGAATGAGTATCATG+TGG | + | chr7.1:20534504-20534523 | MS.gene024315:intron | 30.0% | |
| CAGATTTGGAGAAAATATCA+TGG | + | chr7.1:20535480-20535499 | MS.gene024315:CDS | 30.0% | |
| CAGCATTATAATATTCTCCA+TGG | - | chr7.1:20530228-20530247 | None:intergenic | 30.0% | |
| CGTCTGTTTATTTAATCCAA+AGG | - | chr7.1:20534581-20534600 | None:intergenic | 30.0% | |
| CTAATATGGACATTCAAAGA+AGG | - | chr7.1:20529923-20529942 | None:intergenic | 30.0% | |
| CTTAAAACAAACGTACCATA+TGG | - | chr7.1:20529961-20529980 | None:intergenic | 30.0% | |
| GATGTTCAAGATATTAGAGA+TGG | - | chr7.1:20532288-20532307 | None:intergenic | 30.0% | |
| GTATCAAGATTCATGACATA+TGG | + | chr7.1:20534337-20534356 | MS.gene024315:intron | 30.0% | |
| TAATAAAACTTAGGCAGTCA+CGG | - | chr7.1:20531228-20531247 | None:intergenic | 30.0% | |
| TAGAAGAAGAAAAAGAGAGT+AGG | - | chr7.1:20531910-20531929 | None:intergenic | 30.0% | |
| TCAGTAAGAAACATATCCAA+TGG | + | chr7.1:20529598-20529617 | MS.gene024315:intron | 30.0% | |
| TCTGCTATCATTAACACAAT+AGG | - | chr7.1:20532651-20532670 | None:intergenic | 30.0% | |
| TGTGATTGAGATACATTTCT+GGG | - | chr7.1:20530592-20530611 | None:intergenic | 30.0% | |
| TTTACCTACGTTGTCTAATA+TGG | - | chr7.1:20529937-20529956 | None:intergenic | 30.0% | |
| ! | ACCAACAACGTTTTCAAATT+AGG | - | chr7.1:20534159-20534178 | None:intergenic | 30.0% |
| ! | CATGATATTTTCTCCAAATC+TGG | - | chr7.1:20535482-20535501 | None:intergenic | 30.0% |
| ! | CCAACAACGTTTTCAAATTA+GGG | - | chr7.1:20534158-20534177 | None:intergenic | 30.0% |
| ! | TCCCAAAAACATTTTATACC+CGG | - | chr7.1:20530066-20530085 | None:intergenic | 30.0% |
| ! | TCCGGGTATAAAATGTTTTT+GGG | + | chr7.1:20530062-20530081 | MS.gene024315:intron | 30.0% |
| ! | TCCTTATAATTTGTAGGGTT+TGG | + | chr7.1:20535222-20535241 | MS.gene024315:intron | 30.0% |
| ! | TGAAATAACTTGTGACATGT+AGG | - | chr7.1:20530281-20530300 | None:intergenic | 30.0% |
| ! | TGTCATTTATGAAATCTCTC+AGG | - | chr7.1:20530885-20530904 | None:intergenic | 30.0% |
| ! | TTATTCCCACTCTTTTCTTT+AGG | - | chr7.1:20530102-20530121 | None:intergenic | 30.0% |
| ! | TTCCGGGTATAAAATGTTTT+TGG | + | chr7.1:20530061-20530080 | MS.gene024315:intron | 30.0% |
| !! | TTGAGTTTTCTAGAAATCGT+AGG | + | chr7.1:20530366-20530385 | MS.gene024315:intron | 30.0% |
| !!! | ACTAACTGGGTTTTTTTTTG+TGG | + | chr7.1:20529866-20529885 | MS.gene024315:intron | 30.0% |
| !!! | ATGCATTTTTAGTTTGTGAG+GGG | - | chr7.1:20532802-20532821 | None:intergenic | 30.0% |
| !!! | GATTCTCTCCTTTTTTTTGT+TGG | - | chr7.1:20532427-20532446 | None:intergenic | 30.0% |
| AAAAACAGCTCTGTGGTATT+TGG | - | chr7.1:20535443-20535462 | None:intergenic | 35.0% | |
| AAAAAGTCTTCGACCAACTT+TGG | + | chr7.1:20533029-20533048 | MS.gene024315:intron | 35.0% | |
| AAAAGTCTTCGACCAACTTT+GGG | + | chr7.1:20533030-20533049 | MS.gene024315:intron | 35.0% | |
| AAACTTCAGTATCGTTTGAG+TGG | - | chr7.1:20529624-20529643 | None:intergenic | 35.0% | |
| AAGGCTCACACAAGTTAAAT+TGG | + | chr7.1:20534539-20534558 | MS.gene024315:intron | 35.0% | |
| AATACGACCTTCTCAAAGAA+AGG | + | chr7.1:20529783-20529802 | MS.gene024315:intron | 35.0% | |
| AATAGCACTAGCAATACAAG+AGG | - | chr7.1:20533420-20533439 | None:intergenic | 35.0% | |
| AATTCACTTCCATGTTGCAA+CGG | - | chr7.1:20530312-20530331 | None:intergenic | 35.0% | |
| ACAACGTAGGTAAAACCATA+TGG | + | chr7.1:20529943-20529962 | MS.gene024315:intron | 35.0% | |
| ACAAGACAATTCAAAGCCTT+TGG | + | chr7.1:20534562-20534581 | MS.gene024315:intron | 35.0% | |
| ACGAAATCTATTTCATGGAG+CGG | + | chr7.1:20532013-20532032 | MS.gene024315:intron | 35.0% | |
| AGATATTAGAGATGGCCATT+AGG | - | chr7.1:20532280-20532299 | None:intergenic | 35.0% | |
| AGCCTTCCATAAAAATTTCC+TGG | - | chr7.1:20532476-20532495 | None:intergenic | 35.0% | |
| ATAAACAGACGGTTGAGATT+TGG | + | chr7.1:20534590-20534609 | MS.gene024315:intron | 35.0% | |
| ATGCATATCAGCATTTAGCT+TGG | + | chr7.1:20532816-20532835 | MS.gene024315:intron | 35.0% | |
| ATGTCCATATTAGACAACGT+AGG | + | chr7.1:20529930-20529949 | MS.gene024315:intron | 35.0% | |
| ATGTTAGTGGAAGAAGATGA+AGG | - | chr7.1:20530737-20530756 | None:intergenic | 35.0% | |
| ATTAATACTCCGTTGCAACA+TGG | + | chr7.1:20530300-20530319 | MS.gene024315:intron | 35.0% | |
| ATTCCTCATACAGTCTTCAT+TGG | + | chr7.1:20532525-20532544 | MS.gene024315:CDS | 35.0% | |
| ATTGTACCGTTTACCTTTGT+TGG | - | chr7.1:20530821-20530840 | None:intergenic | 35.0% | |
| CAATGAATTGTTCGAGATAG+TGG | + | chr7.1:20532859-20532878 | MS.gene024315:intron | 35.0% | |
| CAGTACAGAAAAATCCCAAT+TGG | + | chr7.1:20534411-20534430 | MS.gene024315:intron | 35.0% | |
| CCAAATCTGGCTATTAAAAG+AGG | - | chr7.1:20535469-20535488 | None:intergenic | 35.0% | |
| CCCTAATTTGAAAACGTTGT+TGG | + | chr7.1:20534155-20534174 | MS.gene024315:intron | 35.0% | |
| CTCACTTATGAGAAAAGACT+TGG | - | chr7.1:20535044-20535063 | None:intergenic | 35.0% | |
| CTTCTAAGTCATACCCAATT+GGG | - | chr7.1:20534428-20534447 | None:intergenic | 35.0% | |
| GAATGCAGAAACACTTAACA+AGG | + | chr7.1:20533517-20533536 | MS.gene024315:CDS | 35.0% | |
| GACAATATCGTTTGTCCATA+TGG | + | chr7.1:20533346-20533365 | MS.gene024315:intron | 35.0% | |
| GATATTAGAGATGGCCATTA+GGG | - | chr7.1:20532279-20532298 | None:intergenic | 35.0% | |
| GTCCAAGAGGTAATTACATA+AGG | + | chr7.1:20533746-20533765 | MS.gene024315:intron | 35.0% | |
| TAGTAACTACAACGAGTGAT+CGG | + | chr7.1:20531166-20531185 | MS.gene024315:intron | 35.0% | |
| TATCACATGCACATTCTTCT+TGG | + | chr7.1:20532064-20532083 | MS.gene024315:intron | 35.0% | |
| TATGCTTCATAAACTGATGG+AGG | - | chr7.1:20533569-20533588 | None:intergenic | 35.0% | |
| TATTGTGTTAACATGAGCAG+CGG | + | chr7.1:20534481-20534500 | MS.gene024315:intron | 35.0% | |
| TCAACAGTAGGATGATATGT+GGG | - | chr7.1:20535280-20535299 | None:intergenic | 35.0% | |
| TCATGGATGAATTGTTCTCA+AGG | + | chr7.1:20535497-20535516 | MS.gene024315:CDS | 35.0% | |
| TGTAAATAACTCCTTACTCC+AGG | + | chr7.1:20529426-20529445 | MS.gene024315:CDS | 35.0% | |
| TTGACGTAATTTCTCTACGA+GGG | - | chr7.1:20534276-20534295 | None:intergenic | 35.0% | |
| TTTGACGTAATTTCTCTACG+AGG | - | chr7.1:20534277-20534296 | None:intergenic | 35.0% | |
| ! | ATTAGCATCGAATGGTATGA+TGG | + | chr7.1:20533643-20533662 | MS.gene024315:CDS | 35.0% |
| ! | CAAGTCTTTTCTCATAAGTG+AGG | + | chr7.1:20535042-20535061 | MS.gene024315:intron | 35.0% |
| ! | CACCAGGAAATTTTTATGGA+AGG | + | chr7.1:20532471-20532490 | MS.gene024315:CDS | 35.0% |
| ! | CCTCTTTTAATAGCCAGATT+TGG | + | chr7.1:20535466-20535485 | MS.gene024315:CDS | 35.0% |
| ! | CTTGATACCTTTCTTTGAGA+AGG | - | chr7.1:20529793-20529812 | None:intergenic | 35.0% |
| ! | GCAACACCAGGAAATTTTTA+TGG | + | chr7.1:20532467-20532486 | MS.gene024315:CDS | 35.0% |
| ! | GTTAAGTGTTTCTGCATTCT+TGG | - | chr7.1:20533516-20533535 | None:intergenic | 35.0% |
| ! | TAATGCTGATCTCCTTTTGA+AGG | + | chr7.1:20530240-20530259 | MS.gene024315:intron | 35.0% |
| ! | TCTTTTCTCATAAGTGAGGT+TGG | + | chr7.1:20535046-20535065 | MS.gene024315:intron | 35.0% |
| ! | TGGGATTTTTCTGTACTGAA+TGG | - | chr7.1:20534409-20534428 | None:intergenic | 35.0% |
| ! | TGTTGGAAAATAGCCGATTT+AGG | + | chr7.1:20532233-20532252 | MS.gene024315:CDS | 35.0% |
| ! | TTCGAGATAGTGGTTGTTAT+TGG | + | chr7.1:20532869-20532888 | MS.gene024315:intron | 35.0% |
| ! | TTTGAGGAATTAGCATCGAA+TGG | + | chr7.1:20533635-20533654 | MS.gene024315:CDS | 35.0% |
| !! | AAAGTTGGTCGAAGACTTTT+TGG | - | chr7.1:20533030-20533049 | None:intergenic | 35.0% |
| !! | TTGTTGATAGCAAAACGAGA+GGG | + | chr7.1:20535407-20535426 | MS.gene024315:CDS | 35.0% |
| AACATGTATGGACCCAAAGT+TGG | - | chr7.1:20533045-20533064 | None:intergenic | 40.0% | |
| AAGCCAATGAAGACTGTATG+AGG | - | chr7.1:20532531-20532550 | None:intergenic | 40.0% | |
| ACTCATTGAGATGGAGACAT+TGG | + | chr7.1:20535540-20535559 | MS.gene024315:CDS | 40.0% | |
| ATTCTTGGCCAAATCTTTCG+GGG | - | chr7.1:20533501-20533520 | None:intergenic | 40.0% | |
| CAACAGTAGGATGATATGTG+GGG | - | chr7.1:20535279-20535298 | None:intergenic | 40.0% | |
| CAATCCATGAATTAGCCAAG+GGG | - | chr7.1:20534250-20534269 | None:intergenic | 40.0% | |
| CACATATCATCCTACTGTTG+AGG | + | chr7.1:20535279-20535298 | MS.gene024315:CDS | 40.0% | |
| CATTCTTGGCCAAATCTTTC+GGG | - | chr7.1:20533502-20533521 | None:intergenic | 40.0% | |
| CCAATTGGGTATGACTTAGA+AGG | + | chr7.1:20534426-20534445 | MS.gene024315:intron | 40.0% | |
| CCTTCTAAGTCATACCCAAT+TGG | - | chr7.1:20534429-20534448 | None:intergenic | 40.0% | |
| CGAAATCTATTTCATGGAGC+GGG | + | chr7.1:20532014-20532033 | MS.gene024315:intron | 40.0% | |
| CGGTACAATCTCAAAGGAAA+TGG | + | chr7.1:20530832-20530851 | MS.gene024315:intron | 40.0% | |
| CTCAACAGTAGGATGATATG+TGG | - | chr7.1:20535281-20535300 | None:intergenic | 40.0% | |
| GAAGGAATGCTTCACATGAA+GGG | + | chr7.1:20529382-20529401 | MS.gene024315:CDS | 40.0% | |
| GAATTCAATTCACGTGTTGC+TGG | + | chr7.1:20530495-20530514 | MS.gene024315:intron | 40.0% | |
| GACAACACAACTCATTGAGA+TGG | + | chr7.1:20535531-20535550 | MS.gene024315:CDS | 40.0% | |
| GCAATCCATGAATTAGCCAA+GGG | - | chr7.1:20534251-20534270 | None:intergenic | 40.0% | |
| GCATGTGATACTGATCTCTT+TGG | - | chr7.1:20532054-20532073 | None:intergenic | 40.0% | |
| GCATTCTTGGCCAAATCTTT+CGG | - | chr7.1:20533503-20533522 | None:intergenic | 40.0% | |
| GGTAAACGGTACAATCTCAA+AGG | + | chr7.1:20530826-20530845 | MS.gene024315:intron | 40.0% | |
| TACTGTTGAGGAAGTAAGAC+AGG | + | chr7.1:20535291-20535310 | MS.gene024315:CDS | 40.0% | |
| TACTTCATAAGTGCAACACC+AGG | + | chr7.1:20532455-20532474 | MS.gene024315:CDS | 40.0% | |
| TAGAAACACTTTGGATGTGG+AGG | + | chr7.1:20531881-20531900 | MS.gene024315:intron | 40.0% | |
| TCCTGAAGAGCAACCTAAAT+CGG | - | chr7.1:20532249-20532268 | None:intergenic | 40.0% | |
| TGAATGAGTATCATGTGGTG+AGG | + | chr7.1:20534509-20534528 | MS.gene024315:intron | 40.0% | |
| TGCAATCCATGAATTAGCCA+AGG | - | chr7.1:20534252-20534271 | None:intergenic | 40.0% | |
| TGTCTTACTTCCTCAACAGT+AGG | - | chr7.1:20535292-20535311 | None:intergenic | 40.0% | |
| TGTGCAGAGAAAGGTGATAA+TGG | + | chr7.1:20532148-20532167 | MS.gene024315:intron | 40.0% | |
| TTCAGGACCAAATACCCTAA+TGG | + | chr7.1:20532262-20532281 | MS.gene024315:CDS | 40.0% | |
| ! | ACAACCCATTGCACTTTTGT+TGG | - | chr7.1:20532216-20532235 | None:intergenic | 40.0% |
| ! | CAACCCATTGCACTTTTGTT+GGG | - | chr7.1:20532215-20532234 | None:intergenic | 40.0% |
| ! | GGTGAAGGTGCAATTAAGAT+CGG | + | chr7.1:20534447-20534466 | MS.gene024315:intron | 40.0% |
| ! | TCTCTCTCTCTCTAGTGTTT+TGG | + | chr7.1:20534891-20534910 | MS.gene024315:intron | 40.0% |
| ! | TTTGTAGGGTTTGGTTGAAG+AGG | + | chr7.1:20535231-20535250 | MS.gene024315:intron | 40.0% |
| !! | ACAAAAGTGCAATGGGTTGT+TGG | + | chr7.1:20532216-20532235 | MS.gene024315:CDS | 40.0% |
| !! | ATTTCTGTTCAAGGGGTACT+TGG | + | chr7.1:20533704-20533723 | MS.gene024315:CDS | 40.0% |
| !! | CTGATCTCCTTTTGAAGGAA+AGG | + | chr7.1:20530245-20530264 | MS.gene024315:intron | 40.0% |
| !! | GTTGTTGATAGCAAAACGAG+AGG | + | chr7.1:20535406-20535425 | MS.gene024315:CDS | 40.0% |
| !! | TGTATTTCTGGTATGCTTCC+CGG | + | chr7.1:20529558-20529577 | MS.gene024315:intron | 40.0% |
| !! | TGTTGATAGCAAAACGAGAG+GGG | + | chr7.1:20535408-20535427 | MS.gene024315:CDS | 40.0% |
| !!! | TTTTCTGAAGTCGCGATTTG+AGG | + | chr7.1:20533619-20533638 | MS.gene024315:CDS | 40.0% |
| AGACAGGTGATTGAAGCAGA+AGG | + | chr7.1:20535307-20535326 | MS.gene024315:CDS | 45.0% | |
| AGACGCGGAAGAAACATGTA+TGG | - | chr7.1:20533057-20533076 | None:intergenic | 45.0% | |
| AGCTTCTTTCCAACAACACC+GGG | - | chr7.1:20529579-20529598 | None:intergenic | 45.0% | |
| AGGTGCAATTAAGATCGGTG+AGG | + | chr7.1:20534452-20534471 | MS.gene024315:intron | 45.0% | |
| AGTATCGTTTGAGTGGCCAT+TGG | - | chr7.1:20529617-20529636 | None:intergenic | 45.0% | |
| ATGAGTATCATGTGGTGAGG+AGG | + | chr7.1:20534512-20534531 | MS.gene024315:intron | 45.0% | |
| CTTGGAAGTAGTACAGTCGT+GGG | + | chr7.1:20532834-20532853 | MS.gene024315:intron | 45.0% | |
| GACAGGTGATTGAAGCAGAA+GGG | + | chr7.1:20535308-20535327 | MS.gene024315:CDS | 45.0% | |
| GAGCTTCTTTCCAACAACAC+CGG | - | chr7.1:20529580-20529599 | None:intergenic | 45.0% | |
| GAGGTTCAAAAACAGCTCTG+TGG | - | chr7.1:20535450-20535469 | None:intergenic | 45.0% | |
| GGAAGGAATGCTTCACATGA+AGG | + | chr7.1:20529381-20529400 | MS.gene024315:CDS | 45.0% | |
| GGGTATGACTTAGAAGGTGA+AGG | + | chr7.1:20534432-20534451 | MS.gene024315:intron | 45.0% | |
| GTATGCGCTTGAAGAGAATG+AGG | + | chr7.1:20530967-20530986 | MS.gene024315:intron | 45.0% | |
| TAATCAGGCCCCGAAAGATT+TGG | + | chr7.1:20533490-20533509 | MS.gene024315:intron | 45.0% | |
| TCTACCCCTTGGCTAATTCA+TGG | + | chr7.1:20534243-20534262 | MS.gene024315:intron | 45.0% | |
| TGTGACATGTAGGAATGCGA+AGG | - | chr7.1:20530271-20530290 | None:intergenic | 45.0% | |
| TGTGCAACTAACTGCACTCT+AGG | + | chr7.1:20533267-20533286 | MS.gene024315:intron | 45.0% | |
| TTTATTCTTCTGTCCACCCG+TGG | - | chr7.1:20533086-20533105 | None:intergenic | 45.0% | |
| ! | AGTGCCCAACAAAAGTGCAA+TGG | + | chr7.1:20532208-20532227 | MS.gene024315:CDS | 45.0% |
| ! | GAGATGGCCATTAGGGTATT+TGG | - | chr7.1:20532272-20532291 | None:intergenic | 45.0% |
| ! | GATTAGCCAATTCGTCCCAT+CGG | + | chr7.1:20530792-20530811 | MS.gene024315:intron | 45.0% |
| ! | GTGCCCAACAAAAGTGCAAT+GGG | + | chr7.1:20532209-20532228 | MS.gene024315:CDS | 45.0% |
| !! | CAGTCTTCATTGGCTTTCTC+AGG | + | chr7.1:20532535-20532554 | MS.gene024315:CDS | 45.0% |
| !! | ATAATATATTAATAAAACTT+AGG | - | chr7.1:20531237-20531256 | None:intergenic | 5.0% |
| !! | ATATATTATTAAAATATATG+TGG | + | chr7.1:20531248-20531267 | MS.gene024315:intron | 5.0% |
| !! | TAAAAAAAATAAAAATTAGA+AGG | - | chr7.1:20533988-20534007 | None:intergenic | 5.0% |
| !! | TATATTATTAAAATATATGT+GGG | + | chr7.1:20531249-20531268 | MS.gene024315:intron | 5.0% |
| !!! | AAATATTTTATGAAAAAAAT+TGG | + | chr7.1:20529752-20529771 | MS.gene024315:intron | 5.0% |
| !!! | AATTTTTTTCATAAAATATT+TGG | - | chr7.1:20529753-20529772 | None:intergenic | 5.0% |
| !!! | TGTTTAATTTTTTAATATAT+GGG | - | chr7.1:20533780-20533799 | None:intergenic | 5.0% |
| ACTCAACGAGATGGTCCAAG+AGG | + | chr7.1:20533733-20533752 | MS.gene024315:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7.1:20534728-20534747 | None:intergenic | 50.0% | |
| AGTATCATGTGGTGAGGAGG+AGG | + | chr7.1:20534515-20534534 | MS.gene024315:intron | 50.0% | |
| CACTAGAGAGAGAGAGAGAG+AGG | - | chr7.1:20534888-20534907 | None:intergenic | 50.0% | |
| CGGACGCCAACAAAGGTAAA+CGG | + | chr7.1:20530812-20530831 | MS.gene024315:intron | 50.0% | |
| CTTCACATGAAGGGTGGTGT+GGG | + | chr7.1:20529391-20529410 | MS.gene024315:CDS | 50.0% | |
| GCGAAGGCCTTTCCTTCAAA+AGG | - | chr7.1:20530255-20530274 | None:intergenic | 50.0% | |
| GCTTGGAAGTAGTACAGTCG+TGG | + | chr7.1:20532833-20532852 | MS.gene024315:intron | 50.0% | |
| GGAATGCTTCACATGAAGGG+TGG | + | chr7.1:20529385-20529404 | MS.gene024315:CDS | 50.0% | |
| GTCGACATCTTTCTACCCCT+TGG | + | chr7.1:20534232-20534251 | MS.gene024315:intron | 50.0% | |
| TACCTTTGTTGGCGTCCGAT+GGG | - | chr7.1:20530810-20530829 | None:intergenic | 50.0% | |
| TGGCATGGTACTCAACGAGA+TGG | + | chr7.1:20533724-20533743 | MS.gene024315:CDS | 50.0% | |
| TGGCTGCTTCTGCTACCATA+TGG | - | chr7.1:20533364-20533383 | None:intergenic | 50.0% | |
| TTACCTTTGTTGGCGTCCGA+TGG | - | chr7.1:20530811-20530830 | None:intergenic | 50.0% | |
| !! | GCCGATTTAGGTTGCTCTTC+AGG | + | chr7.1:20532245-20532264 | MS.gene024315:CDS | 50.0% |
| !! | TGTTCAAGGGGTACTTGGCA+TGG | + | chr7.1:20533709-20533728 | MS.gene024315:CDS | 50.0% |
| AGATACCCGTGCTACAGCAC+GGG | - | chr7.1:20531841-20531860 | None:intergenic | 55.0% | |
| CATGTGGTGAGGAGGAGGAA+AGG | + | chr7.1:20534520-20534539 | MS.gene024315:intron | 55.0% | |
| CTTCCGCGTCTACACAACCA+CGG | + | chr7.1:20533066-20533085 | MS.gene024315:intron | 55.0% | |
| GAGAGAGAGAGAGAGGAGAG+AGG | - | chr7.1:20534776-20534795 | None:intergenic | 55.0% | |
| GAGATACCCGTGCTACAGCA+CGG | - | chr7.1:20531842-20531861 | None:intergenic | 55.0% | |
| GCTTCACATGAAGGGTGGTG+TGG | + | chr7.1:20529390-20529409 | MS.gene024315:CDS | 55.0% | |
| TTCCGCGTCTACACAACCAC+GGG | + | chr7.1:20533067-20533086 | MS.gene024315:intron | 55.0% | |
| !! | GGTATGCTTCCCGGTGTTGT+TGG | + | chr7.1:20529567-20529586 | MS.gene024315:intron | 55.0% |
| CACCCGTGGTTGTGTAGACG+CGG | - | chr7.1:20533072-20533091 | None:intergenic | 60.0% | |
| GTCCCATCGGACGCCAACAA+AGG | + | chr7.1:20530805-20530824 | MS.gene024315:intron | 60.0% | |
| TGGCGTCCGATGGGACGAAT+TGG | - | chr7.1:20530801-20530820 | None:intergenic | 60.0% | |
| CGCGTCTACACAACCACGGG+TGG | + | chr7.1:20533070-20533089 | MS.gene024315:intron | 65.0% | |
| CGCTACCCGTGCTGTAGCAC+GGG | + | chr7.1:20531833-20531852 | MS.gene024315:intron | 65.0% | |
| GCGCTACCCGTGCTGTAGCA+CGG | + | chr7.1:20531832-20531851 | MS.gene024315:intron | 65.0% | |
| GTGCTACAGCACGGGTAGCG+CGG | - | chr7.1:20531833-20531852 | None:intergenic | 65.0% | |
| TGTCGCGTCTCGGCTGTGCT+TGG | - | chr7.1:20531776-20531795 | None:intergenic | 65.0% | |
| CACAGCCGAGACGCGACACG+CGG | + | chr7.1:20531778-20531797 | MS.gene024315:intron | 70.0% | |
| TTCGCCGCGCTGTATGGCCG+CGG | - | chr7.1:20531809-20531828 | None:intergenic | 70.0% | |
| AGCCGAGACGCGACACGCGG+CGG | + | chr7.1:20531781-20531800 | MS.gene024315:intron | 75.0% | |
| CGCGGCTTCGCCGCGCTGTA+TGG | - | chr7.1:20531815-20531834 | None:intergenic | 75.0% | |
| CTCCGCCGCGTGTCGCGTCT+CGG | - | chr7.1:20531786-20531805 | None:intergenic | 75.0% | |
| GGAGCCGCGGCCATACAGCG+CGG | + | chr7.1:20531802-20531821 | MS.gene024315:intron | 75.0% | |
| ! | CGCGACACGCGGCGGAGCCG+CGG | + | chr7.1:20531789-20531808 | MS.gene024315:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 20529373 | 20535603 | 20529373 | ID=MS.gene024315 |
| chr7.1 | mRNA | 20529373 | 20535603 | 20529373 | ID=MS.gene024315.t1;Parent=MS.gene024315 |
| chr7.1 | exon | 20529373 | 20529447 | 20529373 | ID=MS.gene024315.t1.exon1;Parent=MS.gene024315.t1 |
| chr7.1 | CDS | 20529373 | 20529447 | 20529373 | ID=cds.MS.gene024315.t1;Parent=MS.gene024315.t1 |
| chr7.1 | exon | 20532155 | 20532556 | 20532155 | ID=MS.gene024315.t1.exon2;Parent=MS.gene024315.t1 |
| chr7.1 | CDS | 20532155 | 20532556 | 20532155 | ID=cds.MS.gene024315.t1;Parent=MS.gene024315.t1 |
| chr7.1 | exon | 20533497 | 20533754 | 20533497 | ID=MS.gene024315.t1.exon3;Parent=MS.gene024315.t1 |
| chr7.1 | CDS | 20533497 | 20533754 | 20533497 | ID=cds.MS.gene024315.t1;Parent=MS.gene024315.t1 |
| chr7.1 | exon | 20535238 | 20535603 | 20535238 | ID=MS.gene024315.t1.exon4;Parent=MS.gene024315.t1 |
| chr7.1 | CDS | 20535238 | 20535603 | 20535238 | ID=cds.MS.gene024315.t1;Parent=MS.gene024315.t1 |
| Gene Sequence |
| Protein sequence |
