Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012606.t1 | AES92588.1 | 96.6 | 586 | 20 | 0 | 1 | 586 | 1 | 586 | 0.00E+00 | 1184.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012606.t1 | G7JI01 | 96.6 | 586 | 20 | 0 | 1 | 586 | 1 | 586 | 0.0e+00 | 1184.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012606 | MS.gene005092 | PPI |
| MS.gene012606 | MS.gene042257 | PPI |
| MS.gene012606 | MS.gene43969 | PPI |
| MS.gene60883 | MS.gene012606 | PPI |
| MS.gene042258 | MS.gene012606 | PPI |
| MS.gene012606 | MS.gene043859 | PPI |
| MS.gene012606 | MS.gene036431 | PPI |
| MS.gene012606 | MS.gene60881 | PPI |
| MS.gene012606 | MS.gene000193 | PPI |
| MS.gene012606 | MS.gene036433 | PPI |
| MS.gene012606 | MS.gene000192 | PPI |
| MS.gene012606 | MS.gene005095 | PPI |
| MS.gene012606 | MS.gene52616 | PPI |
| MS.gene012606 | MS.gene043855 | PPI |
| MS.gene012606 | MS.gene000191 | PPI |
| MS.gene012606 | MS.gene60889 | PPI |
| MS.gene061203 | MS.gene012606 | PPI |
| MS.gene012606 | MS.gene60887 | PPI |
| MS.gene043858 | MS.gene012606 | PPI |
| MS.gene012606 | MS.gene000190 | PPI |
| MS.gene012606 | MS.gene005097 | PPI |
| MS.gene60886 | MS.gene012606 | PPI |
| MS.gene012606 | MS.gene33537 | PPI |
| MS.gene043855 | MS.gene012606 | PPI |
| MS.gene012606 | MS.gene52609 | PPI |
| MS.gene60884 | MS.gene012606 | PPI |
| MS.gene012606 | MS.gene60884 | PPI |
| MS.gene012606 | MS.gene60888 | PPI |
| MS.gene000191 | MS.gene012606 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012606.t1 | MTR_4g131710 | 96.587 | 586 | 20 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1178 |
| MS.gene012606.t1 | MTR_2g062410 | 74.490 | 588 | 140 | 4 | 3 | 586 | 5 | 586 | 0.0 | 894 |
| MS.gene012606.t1 | MTR_2g062370 | 71.501 | 593 | 159 | 4 | 1 | 586 | 1 | 590 | 0.0 | 862 |
| MS.gene012606.t1 | MTR_2g062430 | 71.014 | 552 | 149 | 2 | 35 | 586 | 13 | 553 | 0.0 | 830 |
| MS.gene012606.t1 | MTR_2g062380 | 69.656 | 524 | 156 | 2 | 63 | 586 | 40 | 560 | 0.0 | 781 |
| MS.gene012606.t1 | MTR_2g067640 | 56.624 | 551 | 205 | 10 | 46 | 586 | 15 | 541 | 0.0 | 620 |
| MS.gene012606.t1 | MTR_2g062340 | 51.167 | 557 | 214 | 11 | 38 | 585 | 9 | 516 | 0.0 | 550 |
| MS.gene012606.t1 | MTR_1g080370 | 44.283 | 551 | 276 | 10 | 51 | 585 | 23 | 558 | 1.39e-163 | 478 |
| MS.gene012606.t1 | MTR_1g080410 | 44.283 | 551 | 276 | 10 | 51 | 585 | 23 | 558 | 1.39e-163 | 478 |
| MS.gene012606.t1 | MTR_5g007860 | 42.933 | 566 | 289 | 9 | 43 | 585 | 51 | 605 | 5.38e-160 | 471 |
| MS.gene012606.t1 | MTR_4g077620 | 43.772 | 562 | 281 | 13 | 44 | 585 | 21 | 567 | 1.18e-155 | 458 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012606.t1 | AT2G44260 | 51.913 | 549 | 249 | 6 | 39 | 585 | 17 | 552 | 0.0 | 594 |
| MS.gene012606.t1 | AT2G44230 | 51.079 | 556 | 251 | 7 | 35 | 586 | 4 | 542 | 0.0 | 583 |
| MS.gene012606.t1 | AT2G44260 | 53.143 | 525 | 231 | 6 | 63 | 585 | 71 | 582 | 0.0 | 580 |
| MS.gene012606.t1 | AT3G01870 | 43.655 | 591 | 302 | 10 | 8 | 585 | 11 | 583 | 1.08e-168 | 492 |
| MS.gene012606.t1 | AT3G01880 | 45.848 | 554 | 273 | 10 | 42 | 585 | 53 | 589 | 1.00e-165 | 485 |
| MS.gene012606.t1 | AT5G18490 | 45.073 | 548 | 269 | 10 | 51 | 586 | 25 | 552 | 6.87e-165 | 481 |
| MS.gene012606.t1 | AT3G04350 | 43.964 | 555 | 278 | 10 | 51 | 586 | 26 | 566 | 1.90e-161 | 473 |
| MS.gene012606.t1 | AT3G04350 | 43.376 | 551 | 279 | 10 | 55 | 586 | 8 | 544 | 5.71e-157 | 461 |
| MS.gene012606.t1 | AT1G04090 | 43.137 | 561 | 281 | 14 | 50 | 585 | 23 | 570 | 2.10e-150 | 445 |
| MS.gene012606.t1 | AT5G43950 | 42.058 | 554 | 291 | 11 | 50 | 585 | 23 | 564 | 2.71e-149 | 442 |
Find 127 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAACGTTTAACAAAATT+TGG | 0.066286 | 8.1:-2210994 | MS.gene012606:CDS |
| CAAAATTGCTAGTATCATTT+TGG | 0.131465 | 8.1:+2209895 | None:intergenic |
| CGAAATTTCTTCGTCGATTT+GGG | 0.192513 | 8.1:-2210609 | MS.gene012606:CDS |
| GCGAAATTTCTTCGTCGATT+TGG | 0.194682 | 8.1:-2210610 | MS.gene012606:CDS |
| ATTGGTTTCTGCAGAGTATT+TGG | 0.212634 | 8.1:-2209721 | MS.gene012606:CDS |
| GACATTAAGGGTAAGTAATT+TGG | 0.218905 | 8.1:-2209991 | MS.gene012606:CDS |
| GCTTGAGTTCCTCTACTTAT+TGG | 0.237504 | 8.1:+2210554 | None:intergenic |
| TCCTCTTGCAACATTTCTTT+TGG | 0.247710 | 8.1:+2209549 | None:intergenic |
| GTAATTTGGATGGTAAATTA+TGG | 0.253190 | 8.1:-2209977 | MS.gene012606:CDS |
| TGATCTTTGAAATGGAATTA+AGG | 0.258367 | 8.1:+2210453 | None:intergenic |
| TTCCAACTGCAACTACTTCT+TGG | 0.267862 | 8.1:-2211179 | MS.gene012606:CDS |
| ATCAACGTTTAACAAAATTT+GGG | 0.287048 | 8.1:-2210993 | MS.gene012606:CDS |
| ACTGGGAGCATGTGACATTA+AGG | 0.288797 | 8.1:-2210004 | MS.gene012606:CDS |
| TTGGTTTCTGCAGAGTATTT+GGG | 0.291761 | 8.1:-2209720 | MS.gene012606:CDS |
| AAGTAGCAAAGTTATGGATA+TGG | 0.311164 | 8.1:-2209754 | MS.gene012606:CDS |
| CAAAATTTGAGTAGCTGAAT+AGG | 0.318702 | 8.1:+2210760 | None:intergenic |
| CAATAGGCGCGGTCATGTTT+AGG | 0.320126 | 8.1:+2210236 | None:intergenic |
| CTAAACATGACCGCGCCTAT+TGG | 0.333364 | 8.1:-2210235 | MS.gene012606:CDS |
| AAATTGAAGAAGTTGTTTCT+AGG | 0.346682 | 8.1:-2209612 | MS.gene012606:CDS |
| CATGCTGGCCTTGTTCTACT+AGG | 0.347802 | 8.1:-2209813 | MS.gene012606:CDS |
| GCTTTAATTTGTTGTAGATT+AGG | 0.348824 | 8.1:+2210428 | None:intergenic |
| CCAAATGGCTACCGTGCTTT+AGG | 0.353128 | 8.1:-2210710 | MS.gene012606:CDS |
| GCGCGGTCATGTTTAGGATT+AGG | 0.354023 | 8.1:+2210242 | None:intergenic |
| CTGATCATACAAACAAAGAT+AGG | 0.360712 | 8.1:-2210199 | MS.gene012606:CDS |
| TCCTAGAGCAGCTGCACAAA+TGG | 0.376330 | 8.1:-2213519 | MS.gene012606:CDS |
| AATACAAATGTGTAATCAAT+TGG | 0.386535 | 8.1:+2210794 | None:intergenic |
| CCTAGACCAATAGCACAAAA+TGG | 0.392047 | 8.1:-2210284 | MS.gene012606:CDS |
| CCTAAAGCACGGTAGCCATT+TGG | 0.392578 | 8.1:+2210710 | None:intergenic |
| ATTAGGCATGATCTTTGAAA+TGG | 0.397170 | 8.1:+2210445 | None:intergenic |
| GGATATGGGGAAATATGTAT+TGG | 0.401878 | 8.1:-2209739 | MS.gene012606:CDS |
| GCACAAATGGGTCAAATTCC+AGG | 0.402115 | 8.1:-2213506 | MS.gene012606:intron |
| AGCTTGAATACGGTATCAAT+GGG | 0.415583 | 8.1:+2211201 | None:intergenic |
| CCTCAAGGATTCTCTATGTT+AGG | 0.416568 | 8.1:-2210911 | MS.gene012606:CDS |
| AGTAGCAAAGTTATGGATAT+GGG | 0.416962 | 8.1:-2209753 | MS.gene012606:CDS |
| AAAATTTGGGGAGCCATTGA+TGG | 0.426406 | 8.1:-2210980 | MS.gene012606:CDS |
| TGGCTTTAATGTGCTCTTTG+TGG | 0.427124 | 8.1:+2210817 | None:intergenic |
| ACTTACCTTCATCAGTCAAT+TGG | 0.427526 | 8.1:-2210355 | MS.gene012606:CDS |
| AATTGAAGAAGTTGTTTCTA+GGG | 0.430110 | 8.1:-2209611 | MS.gene012606:CDS |
| GATGGTGGACCGGATGATAA+AGG | 0.432800 | 8.1:-2210962 | MS.gene012606:CDS |
| CTTGTATAGTAATGCTCCAT+TGG | 0.433338 | 8.1:+2210325 | None:intergenic |
| TGCAATGAAGCATGAACAAC+AGG | 0.439399 | 8.1:+2209855 | None:intergenic |
| TCTTTGTTTGTATGATCAGC+TGG | 0.440103 | 8.1:+2210203 | None:intergenic |
| CACATCATAAGACAGGTTCA+TGG | 0.444967 | 8.1:-2209941 | MS.gene012606:CDS |
| GCCTCAGTGTTCGAACCAAC+AGG | 0.448044 | 8.1:-2210938 | MS.gene012606:CDS |
| GCGAGAGGAGTCCTCGATCT+AGG | 0.448860 | 8.1:-2211037 | MS.gene012606:CDS |
| TCAGGATGTAGGTATAGAAA+TGG | 0.449014 | 8.1:+2210386 | None:intergenic |
| CGGTAGCCATTTGGAGCTAC+TGG | 0.451064 | 8.1:+2210719 | None:intergenic |
| TCTTCGTCGATTTGGGAATC+CGG | 0.451276 | 8.1:-2210602 | MS.gene012606:CDS |
| GTACATGTGAAACCAATGTT+TGG | 0.455920 | 8.1:-2210140 | MS.gene012606:CDS |
| TTGCAAGAGGAAGGACCAAC+AGG | 0.458852 | 8.1:-2209537 | MS.gene012606:CDS |
| GCAACTACTTCTTGGCCAAA+AGG | 0.466697 | 8.1:-2211171 | MS.gene012606:intron |
| AAGCTTGAATACGGTATCAA+TGG | 0.471010 | 8.1:+2211200 | None:intergenic |
| TGCAGTTGGAAGCTTGAATA+CGG | 0.472456 | 8.1:+2211191 | None:intergenic |
| AACCTTCCAGGTCCATTGAA+AGG | 0.472890 | 8.1:+2210080 | None:intergenic |
| ACCTTCCAGGTCCATTGAAA+GGG | 0.477333 | 8.1:+2210081 | None:intergenic |
| GTTGTTCATGCTTCATTGCA+TGG | 0.479910 | 8.1:-2209852 | MS.gene012606:CDS |
| TGTTTGTGTTGTGCTTCTCA+TGG | 0.488786 | 8.1:-2213552 | MS.gene012606:CDS |
| CCCATTTGTGCAGCTGCTCT+AGG | 0.491596 | 8.1:+2213518 | None:intergenic |
| ATCATCCGGTCCACCATCAA+TGG | 0.492503 | 8.1:+2210967 | None:intergenic |
| TGTTGTGCTTCTCATGGCAA+TGG | 0.493934 | 8.1:-2213546 | MS.gene012606:CDS |
| AAATGGTACTAACCTTCCTC+AGG | 0.498248 | 8.1:-2210267 | MS.gene012606:CDS |
| TGGTTTCTGCAGAGTATTTG+GGG | 0.500916 | 8.1:-2209719 | MS.gene012606:CDS |
| AATGTTAAATTAGAGAGAAT+AGG | 0.502401 | 8.1:-2210041 | MS.gene012606:CDS |
| CTGGGAGCATGTGACATTAA+GGG | 0.504616 | 8.1:-2210003 | MS.gene012606:CDS |
| AGCTGGTAGGTCTATCCAAT+AGG | 0.505188 | 8.1:+2210220 | None:intergenic |
| CTATAAAAGTTCAACCATGC+TGG | 0.506747 | 8.1:+2209681 | None:intergenic |
| GTCATAGAAATTGAAGTCTC+CGG | 0.508375 | 8.1:+2210583 | None:intergenic |
| AAAGAGGTTTGTTGTTGGGT+TGG | 0.517837 | 8.1:+2210879 | None:intergenic |
| CCTAGAGCAGCTGCACAAAT+GGG | 0.519510 | 8.1:-2213518 | MS.gene012606:CDS |
| GGGAGCCATTGATGGTGGAC+CGG | 0.519648 | 8.1:-2210972 | MS.gene012606:CDS |
| TAGGTGAACATGTTGGTGAC+TGG | 0.528649 | 8.1:-2210022 | MS.gene012606:CDS |
| TATTTCTCACATCATAAGAC+AGG | 0.534217 | 8.1:-2209948 | MS.gene012606:CDS |
| TGTTTGTATGATCAGCTGGT+AGG | 0.536283 | 8.1:+2210207 | None:intergenic |
| ACCAAAAGAAATGTTGCAAG+AGG | 0.544639 | 8.1:-2209550 | MS.gene012606:CDS |
| ACAAATGTGTAATCAATTGG+TGG | 0.545480 | 8.1:+2210797 | None:intergenic |
| GGAAGGACCAACAGGTCCAA+AGG | 0.546506 | 8.1:-2209529 | MS.gene012606:CDS |
| TTCAAACATGAAATAGATGG+AGG | 0.547187 | 8.1:+2210479 | None:intergenic |
| ACTGAGGCTCCTTTATCATC+CGG | 0.547432 | 8.1:+2210953 | None:intergenic |
| GTGAAGGTTCCTCCAAACAT+TGG | 0.547819 | 8.1:+2210128 | None:intergenic |
| AATCCTTGAGGTATTCCTGT+TGG | 0.552718 | 8.1:+2210923 | None:intergenic |
| GGCCAAGAAGTAGTTGCAGT+TGG | 0.554452 | 8.1:+2211177 | None:intergenic |
| TGGCTACCAGTAGCTCCAAA+TGG | 0.555141 | 8.1:-2210725 | MS.gene012606:CDS |
| GAATACGGTATCAATGGGGC+GGG | 0.557209 | 8.1:+2211206 | None:intergenic |
| AAAGAAATGTTGCAAGAGGA+AGG | 0.566876 | 8.1:-2209546 | MS.gene012606:CDS |
| GGAGCATTACTATACAAGAA+AGG | 0.567167 | 8.1:-2210320 | MS.gene012606:CDS |
| ATGCTGGCCTTGTTCTACTA+GGG | 0.569406 | 8.1:-2209812 | MS.gene012606:CDS |
| TCTAACTTATAGTCAACATG+TGG | 0.575589 | 8.1:+2209648 | None:intergenic |
| ATTTGGGGAGCCATTGATGG+TGG | 0.576760 | 8.1:-2210977 | MS.gene012606:CDS |
| CAAGCTCGAGGCATTCATGT+AGG | 0.578639 | 8.1:-2210536 | MS.gene012606:CDS |
| TGATCATACAAACAAAGATA+GGG | 0.582823 | 8.1:-2210198 | MS.gene012606:CDS |
| TAGGATTAGGACCCTGAGGA+AGG | 0.585115 | 8.1:+2210255 | None:intergenic |
| ACCCTTTCAATGGACCTGGA+AGG | 0.585334 | 8.1:-2210082 | MS.gene012606:CDS |
| CATTCAACATATCCACATGC+TGG | 0.585598 | 8.1:-2209828 | MS.gene012606:CDS |
| CAGCATGTGGATATGTTGAA+TGG | 0.587256 | 8.1:+2209829 | None:intergenic |
| GGTTTCTGCAGAGTATTTGG+GGG | 0.590788 | 8.1:-2209718 | MS.gene012606:CDS |
| TCAAACATGAAATAGATGGA+GGG | 0.594887 | 8.1:+2210480 | None:intergenic |
| TTAAGGGTAAGTAATTTGGA+TGG | 0.595987 | 8.1:-2209987 | MS.gene012606:CDS |
| AGGTGAACATGTTGGTGACT+GGG | 0.596607 | 8.1:-2210021 | MS.gene012606:CDS |
| ACAGGTAATGGTTTCGCGAG+AGG | 0.598849 | 8.1:-2211052 | MS.gene012606:intron |
| TCAACGTTTAACAAAATTTG+GGG | 0.601243 | 8.1:-2210992 | MS.gene012606:CDS |
| ACGTTGATACTGTAGACACT+TGG | 0.605593 | 8.1:+2211008 | None:intergenic |
| GAGAGAATAGGTGAACATGT+TGG | 0.607765 | 8.1:-2210029 | MS.gene012606:CDS |
| TGTGCTTCTCATGGCAATGG+AGG | 0.611499 | 8.1:-2213543 | MS.gene012606:CDS |
| AGAGGAGTCCTCGATCTAGG+TGG | 0.612378 | 8.1:-2211034 | MS.gene012606:CDS |
| GAGGAGTCCTCGATCTAGGT+GGG | 0.614351 | 8.1:-2211033 | MS.gene012606:CDS |
| CATGTGAAACCAATGTTTGG+AGG | 0.614379 | 8.1:-2210137 | MS.gene012606:CDS |
| GTAGCAAAGTTATGGATATG+GGG | 0.617576 | 8.1:-2209752 | MS.gene012606:CDS |
| AAATTTCGCATTTCTCTGTG+AGG | 0.618922 | 8.1:+2210624 | None:intergenic |
| CCACATTGCAAAATCAGTGA+AGG | 0.620887 | 8.1:+2210112 | None:intergenic |
| TGAATACGGTATCAATGGGG+CGG | 0.624090 | 8.1:+2211205 | None:intergenic |
| TGACGACATGGCCTAAAGCA+CGG | 0.634701 | 8.1:+2210699 | None:intergenic |
| GACGTTAGACCAATAAGTAG+AGG | 0.639362 | 8.1:-2210563 | MS.gene012606:CDS |
| GTAAAGTTAAAGAGCCAGCA+TGG | 0.641409 | 8.1:-2209695 | MS.gene012606:CDS |
| GTTTCTGCAGAGTATTTGGG+GGG | 0.649793 | 8.1:-2209717 | MS.gene012606:CDS |
| AGTAGAACAAGGCCAGCATG+TGG | 0.653698 | 8.1:+2209816 | None:intergenic |
| ACTGGTAGCCAAATATACAA+AGG | 0.659249 | 8.1:+2210737 | None:intergenic |
| AACAAAGATAGGGTCAAACA+AGG | 0.663777 | 8.1:-2210188 | MS.gene012606:CDS |
| CTTGGAGCCCACCTAGATCG+AGG | 0.667633 | 8.1:+2211026 | None:intergenic |
| GAACCAACAGGAATACCTCA+AGG | 0.672260 | 8.1:-2210926 | MS.gene012606:CDS |
| TCCTGTTGGTTCGAACACTG+AGG | 0.676070 | 8.1:+2210937 | None:intergenic |
| AGTAGAGGAACTCAAGCTCG+AGG | 0.676376 | 8.1:-2210548 | MS.gene012606:CDS |
| TGTTTAGGATTAGGACCCTG+AGG | 0.683877 | 8.1:+2210251 | None:intergenic |
| AATGGTACTAACCTTCCTCA+GGG | 0.693194 | 8.1:-2210266 | MS.gene012606:CDS |
| CCTAACATAGAGAATCCTTG+AGG | 0.700330 | 8.1:+2210911 | None:intergenic |
| CTAACTTATAGTCAACATGT+GGG | 0.708098 | 8.1:+2209649 | None:intergenic |
| GTAGGTCTATCCAATAGGCG+CGG | 0.731921 | 8.1:+2210225 | None:intergenic |
| GCTTGAATACGGTATCAATG+GGG | 0.743991 | 8.1:+2211202 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACTATAATATATCATAAA+AGG | + | chr8.1:2211959-2211978 | None:intergenic | 15.0% |
| !! | ATTAGATCTAATTAATTTAG+CGG | - | chr8.1:2209788-2209807 | MS.gene012606:CDS | 15.0% |
| !! | TTAAAAAGATAGAATATTGT+TGG | + | chr8.1:2209814-2209833 | None:intergenic | 15.0% |
| !! | TTATATATAAGAAAAAAGTG+AGG | - | chr8.1:2211194-2211213 | MS.gene012606:CDS | 15.0% |
| !!! | AACTTTTAAGTTGTTTTTTT+AGG | + | chr8.1:2210573-2210592 | None:intergenic | 15.0% |
| !!! | ACTTTTAAGTTGTTTTTTTA+GGG | + | chr8.1:2210572-2210591 | None:intergenic | 15.0% |
| !!! | ATGTTTTTGAAAAAGTTATT+AGG | - | chr8.1:2213497-2213516 | MS.gene012606:intron | 15.0% |
| !!! | GTAAAAATATCTTTAAGAAA+AGG | - | chr8.1:2211836-2211855 | MS.gene012606:intron | 15.0% |
| !!! | TATTTATTTGTTACAACTTT+TGG | + | chr8.1:2210259-2210278 | None:intergenic | 15.0% |
| !!! | TGTTTTTGAAAAAGTTATTA+GGG | - | chr8.1:2213498-2213517 | MS.gene012606:intron | 15.0% |
| !!! | TTTATACAACTTTTTTTTTG+TGG | + | chr8.1:2210854-2210873 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTCAATTAGATT+TGG | + | chr8.1:2209749-2209768 | None:intergenic | 15.0% |
| !! | AATACAAATGTGTAATCAAT+TGG | + | chr8.1:2212284-2212303 | None:intergenic | 20.0% |
| !! | AATGTTAAATTAGAGAGAAT+AGG | - | chr8.1:2213034-2213053 | MS.gene012606:intron | 20.0% |
| !! | ATATAAGATAAGAGAGAATA+AGG | + | chr8.1:2211180-2211199 | None:intergenic | 20.0% |
| !! | ATCAACGTTTAACAAAATTT+GGG | - | chr8.1:2212082-2212101 | MS.gene012606:intron | 20.0% |
| !! | GGATTTGTCAAAAAAAAAAA+AGG | + | chr8.1:2210115-2210134 | None:intergenic | 20.0% |
| !! | GTTGTATAAATCAAATTAAC+AGG | - | chr8.1:2210864-2210883 | MS.gene012606:CDS | 20.0% |
| !! | TAAGAAAAGTAAAGTAACAA+TGG | + | chr8.1:2209610-2209629 | None:intergenic | 20.0% |
| !! | TATAAGATAAGAGAGAATAA+GGG | + | chr8.1:2211179-2211198 | None:intergenic | 20.0% |
| !! | TATCAACGTTTAACAAAATT+TGG | - | chr8.1:2212081-2212100 | MS.gene012606:intron | 20.0% |
| !! | TTCAAACAAAATCATTATTC+AGG | + | chr8.1:2210144-2210163 | None:intergenic | 20.0% |
| !!! | AAATTACTTCAAACTTTTGA+CGG | - | chr8.1:2210196-2210215 | MS.gene012606:CDS | 20.0% |
| !!! | AAATTTTGCCTTTGTATATT+TGG | - | chr8.1:2212330-2212349 | MS.gene012606:intron | 20.0% |
| !!! | AATCTAACTATAAGCTTTTA+AGG | - | chr8.1:2211068-2211087 | MS.gene012606:intron | 20.0% |
| !!! | GTTTTTGAAAAAGTTATTAG+GGG | - | chr8.1:2213499-2213518 | MS.gene012606:intron | 20.0% |
| !!! | TTTATTCTTTGAAAAATGCT+TGG | + | chr8.1:2210649-2210668 | None:intergenic | 20.0% |
| !!! | TTTTTCAAACATGAAATAGA+TGG | + | chr8.1:2212602-2212621 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGACAAATCCAT+TGG | - | chr8.1:2210117-2210136 | MS.gene012606:CDS | 20.0% |
| ! | AACAATGCATAATGTATGTA+AGG | - | chr8.1:2210806-2210825 | MS.gene012606:CDS | 25.0% |
| ! | AAGGAAAAGAAAAATTGGAA+TGG | - | chr8.1:2213565-2213584 | MS.gene012606:CDS | 25.0% |
| ! | ATCATAAAAGGAGAGAAAAA+TGG | + | chr8.1:2211947-2211966 | None:intergenic | 25.0% |
| ! | ATTCATGCAGAAATATTGAA+TGG | - | chr8.1:2210696-2210715 | MS.gene012606:CDS | 25.0% |
| ! | CAAAAAAAAAAAAGGTCCAA+TGG | + | chr8.1:2210107-2210126 | None:intergenic | 25.0% |
| ! | CTATGAAAATGTGTCTTTAA+TGG | + | chr8.1:2210941-2210960 | None:intergenic | 25.0% |
| ! | CTTGGAATATCAAAAAACTA+TGG | + | chr8.1:2210328-2210347 | None:intergenic | 25.0% |
| ! | GAAAAAAGTGAGGTAAAAAA+AGG | - | chr8.1:2211204-2211223 | MS.gene012606:CDS | 25.0% |
| ! | GAAAAATGGAAATCAAATGA+TGG | + | chr8.1:2211933-2211952 | None:intergenic | 25.0% |
| ! | GTAATTTGGATGGTAAATTA+TGG | - | chr8.1:2213098-2213117 | MS.gene012606:intron | 25.0% |
| ! | GTGTTAATGCAAAGATAATA+AGG | + | chr8.1:2211771-2211790 | None:intergenic | 25.0% |
| ! | GTTTGCGACAAAAAAATAAA+TGG | - | chr8.1:2210915-2210934 | MS.gene012606:CDS | 25.0% |
| ! | TAGATCTAATGATTGAGATT+TGG | + | chr8.1:2209778-2209797 | None:intergenic | 25.0% |
| ! | TCAACGTTTAACAAAATTTG+GGG | - | chr8.1:2212083-2212102 | MS.gene012606:intron | 25.0% |
| ! | TCTGTAAAAGTAATCGTAAA+AGG | + | chr8.1:2211282-2211301 | None:intergenic | 25.0% |
| ! | TGAAAAAAGTAGCAAAGTTA+TGG | - | chr8.1:2213315-2213334 | MS.gene012606:intron | 25.0% |
| ! | TGATCATACAAACAAAGATA+GGG | - | chr8.1:2212877-2212896 | MS.gene012606:intron | 25.0% |
| ! | TGTGTCTTTAGTTAGTTAAT+AGG | + | chr8.1:2210973-2210992 | None:intergenic | 25.0% |
| ! | TTGTAAAAAAAAACTTCACC+CGG | - | chr8.1:2210603-2210622 | MS.gene012606:CDS | 25.0% |
| ! | TTTCAGTTGAAATCCAATTA+CGG | - | chr8.1:2210504-2210523 | MS.gene012606:CDS | 25.0% |
| !! | ACAATATCACCTAGTATTTT+CGG | + | chr8.1:2211310-2211329 | None:intergenic | 25.0% |
| !! | CAAAATTGCTAGTATCATTT+TGG | + | chr8.1:2213183-2213202 | None:intergenic | 25.0% |
| !! | TTCCAATTTTTCTTTTCCTT+TGG | + | chr8.1:2213565-2213584 | None:intergenic | 25.0% |
| !! | TTTCTAGAGAAAAATACTCT+CGG | - | chr8.1:2211681-2211700 | MS.gene012606:intron | 25.0% |
| !!! | AAATTGAAGAAGTTGTTTCT+AGG | - | chr8.1:2213463-2213482 | MS.gene012606:intron | 25.0% |
| !!! | AATTGAAGAAGTTGTTTCTA+GGG | - | chr8.1:2213464-2213483 | MS.gene012606:intron | 25.0% |
| !!! | AGGTGTACAATACTATTTTT+AGG | - | chr8.1:2211224-2211243 | MS.gene012606:CDS | 25.0% |
| !!! | ATACAACTTTTTTTTTGTGG+TGG | + | chr8.1:2210851-2210870 | None:intergenic | 25.0% |
| !!! | CTTACATCACTTTTCATAAA+GGG | + | chr8.1:2211489-2211508 | None:intergenic | 25.0% |
| !!! | GCTTTAATTTGTTGTAGATT+AGG | + | chr8.1:2212650-2212669 | None:intergenic | 25.0% |
| !!! | GGTGTACAATACTATTTTTA+GGG | - | chr8.1:2211225-2211244 | MS.gene012606:CDS | 25.0% |
| !!! | TATTTGTTACAACTTTTGGA+AGG | + | chr8.1:2210255-2210274 | None:intergenic | 25.0% |
| !!! | TATTTTTCTCTAGAAACGTA+TGG | + | chr8.1:2211677-2211696 | None:intergenic | 25.0% |
| !!! | TGATCTTTGAAATGGAATTA+AGG | + | chr8.1:2212625-2212644 | None:intergenic | 25.0% |
| !!! | TTTAGGGTAAAGTATTTTGT+AGG | - | chr8.1:2211241-2211260 | MS.gene012606:CDS | 25.0% |
| AAAAACCAATTGACTGATGA+AGG | + | chr8.1:2212728-2212747 | None:intergenic | 30.0% | |
| AAATCATTATTCAGGTCCAA+TGG | + | chr8.1:2210136-2210155 | None:intergenic | 30.0% | |
| AAGTAGCAAAGTTATGGATA+TGG | - | chr8.1:2213321-2213340 | MS.gene012606:intron | 30.0% | |
| ACAAATGTGTAATCAATTGG+TGG | + | chr8.1:2212281-2212300 | None:intergenic | 30.0% | |
| AGTAGCAAAGTTATGGATAT+GGG | - | chr8.1:2213322-2213341 | MS.gene012606:intron | 30.0% | |
| AGTATATCTCAAATCACACA+TGG | + | chr8.1:2210366-2210385 | None:intergenic | 30.0% | |
| ATAACATCATATCTTCGTTC+AGG | + | chr8.1:2211149-2211168 | None:intergenic | 30.0% | |
| CAAAATTTGAGTAGCTGAAT+AGG | + | chr8.1:2212318-2212337 | None:intergenic | 30.0% | |
| CATAATGTATGTAAGGTTCA+GGG | - | chr8.1:2210813-2210832 | MS.gene012606:CDS | 30.0% | |
| CCTTTATGAAAAGTGATGTA+AGG | - | chr8.1:2211487-2211506 | MS.gene012606:intron | 30.0% | |
| CTAACTTATAGTCAACATGT+GGG | + | chr8.1:2213429-2213448 | None:intergenic | 30.0% | |
| CTGATCATACAAACAAAGAT+AGG | - | chr8.1:2212876-2212895 | MS.gene012606:intron | 30.0% | |
| GACATTAAGGGTAAGTAATT+TGG | - | chr8.1:2213084-2213103 | MS.gene012606:intron | 30.0% | |
| GCATAATAAACATGAACATG+TGG | + | chr8.1:2211811-2211830 | None:intergenic | 30.0% | |
| GCGCAAAACATTATTAGTTA+AGG | - | chr8.1:2209874-2209893 | MS.gene012606:CDS | 30.0% | |
| GTCCAAAGGAAAAGAAAAAT+TGG | - | chr8.1:2213560-2213579 | MS.gene012606:CDS | 30.0% | |
| TAAAGGGAGATGTAAATTTC+TGG | + | chr8.1:2211473-2211492 | None:intergenic | 30.0% | |
| TAACCAAAAAGAACAAACAC+AGG | + | chr8.1:2209690-2209709 | None:intergenic | 30.0% | |
| TATTTCTCACATCATAAGAC+AGG | - | chr8.1:2213127-2213146 | MS.gene012606:intron | 30.0% | |
| TCAAACATGAAATAGATGGA+GGG | + | chr8.1:2212598-2212617 | None:intergenic | 30.0% | |
| TCGCACATTGAAAATATACA+AGG | - | chr8.1:2211647-2211666 | MS.gene012606:intron | 30.0% | |
| TCTAACTTATAGTCAACATG+TGG | + | chr8.1:2213430-2213449 | None:intergenic | 30.0% | |
| TGGACTAAACAATTGAAACT+TGG | + | chr8.1:2210346-2210365 | None:intergenic | 30.0% | |
| TTAAGGGTAAGTAATTTGGA+TGG | - | chr8.1:2213088-2213107 | MS.gene012606:intron | 30.0% | |
| TTCAAACATGAAATAGATGG+AGG | + | chr8.1:2212599-2212618 | None:intergenic | 30.0% | |
| TTTGAAAAATGCTTGGCAAA+CGG | + | chr8.1:2210642-2210661 | None:intergenic | 30.0% | |
| ! | AACACACATGATTTTGTCAA+GGG | + | chr8.1:2212423-2212442 | None:intergenic | 30.0% |
| ! | AGTATTTTTCATCAGGATGT+AGG | + | chr8.1:2212703-2212722 | None:intergenic | 30.0% |
| ! | ATAATGTTTTGCGCTTTCAT+TGG | + | chr8.1:2209868-2209887 | None:intergenic | 30.0% |
| ! | ATTAGGCATGATCTTTGAAA+TGG | + | chr8.1:2212633-2212652 | None:intergenic | 30.0% |
| ! | ATTCCTGTGTTTGTTCTTTT+TGG | - | chr8.1:2209684-2209703 | MS.gene012606:CDS | 30.0% |
| ! | CACATTAACATAGTCTTACA+TGG | + | chr8.1:2211412-2211431 | None:intergenic | 30.0% |
| ! | CATTTTTGACAAACAACCAT+TGG | - | chr8.1:2210088-2210107 | MS.gene012606:CDS | 30.0% |
| ! | GAAGGTAAGTATTTTTCATC+AGG | + | chr8.1:2212710-2212729 | None:intergenic | 30.0% |
| ! | GTTGAACTTTTATAGGACAT+GGG | - | chr8.1:2213402-2213421 | MS.gene012606:intron | 30.0% |
| ! | TAACACACATGATTTTGTCA+AGG | + | chr8.1:2212424-2212443 | None:intergenic | 30.0% |
| ! | TTAGTACCATTTTGTGCTAT+TGG | + | chr8.1:2212800-2212819 | None:intergenic | 30.0% |
| ! | TTGAACTTTTATAGGACATG+GGG | - | chr8.1:2213403-2213422 | MS.gene012606:intron | 30.0% |
| !! | CCTTACATCACTTTTCATAA+AGG | + | chr8.1:2211490-2211509 | None:intergenic | 30.0% |
| !! | TAGTTTGCTTAATGCTTCAT+TGG | - | chr8.1:2209659-2209678 | MS.gene012606:CDS | 30.0% |
| !!! | ATCAAATGATGGATACCTTT+TGG | + | chr8.1:2211922-2211941 | None:intergenic | 30.0% |
| !!! | ATTTTGGAATTCAAGTTGAG+AGG | + | chr8.1:2213167-2213186 | None:intergenic | 30.0% |
| AAAGAAATGTTGCAAGAGGA+AGG | - | chr8.1:2213529-2213548 | MS.gene012606:CDS | 35.0% | |
| AAATTTCGCATTTCTCTGTG+AGG | + | chr8.1:2212454-2212473 | None:intergenic | 35.0% | |
| AACAAAGATAGGGTCAAACA+AGG | - | chr8.1:2212887-2212906 | MS.gene012606:intron | 35.0% | |
| AACCTGATCATTTCAGAACT+TGG | + | chr8.1:2211521-2211540 | None:intergenic | 35.0% | |
| AAGCTTGAATACGGTATCAA+TGG | + | chr8.1:2211878-2211897 | None:intergenic | 35.0% | |
| ACAAGAACATACCCAAAAAG+AGG | + | chr8.1:2212215-2212234 | None:intergenic | 35.0% | |
| ACCAAAAGAAATGTTGCAAG+AGG | - | chr8.1:2213525-2213544 | MS.gene012606:CDS | 35.0% | |
| ACCATTGAATTGCAACATAC+AGG | - | chr8.1:2212005-2212024 | MS.gene012606:intron | 35.0% | |
| ACCTGTATGTTGCAATTCAA+TGG | + | chr8.1:2212009-2212028 | None:intergenic | 35.0% | |
| ACTGGTAGCCAAATATACAA+AGG | + | chr8.1:2212341-2212360 | None:intergenic | 35.0% | |
| ACTTACCTTCATCAGTCAAT+TGG | - | chr8.1:2212720-2212739 | MS.gene012606:intron | 35.0% | |
| AGAAAATACAGTGCCGTAAT+TGG | + | chr8.1:2210520-2210539 | None:intergenic | 35.0% | |
| AGCTTGAATACGGTATCAAT+GGG | + | chr8.1:2211877-2211896 | None:intergenic | 35.0% | |
| ATACTATATCCCACCTAATG+AGG | - | chr8.1:2210381-2210400 | MS.gene012606:CDS | 35.0% | |
| ATTAGGGGAATTTCCTCATT+AGG | + | chr8.1:2210397-2210416 | None:intergenic | 35.0% | |
| CTACTAGGGAAAAAAGGAAT+AGG | - | chr8.1:2213277-2213296 | MS.gene012606:intron | 35.0% | |
| CTATAAAAGTTCAACCATGC+TGG | + | chr8.1:2213397-2213416 | None:intergenic | 35.0% | |
| CTTGTATAGTAATGCTCCAT+TGG | + | chr8.1:2212753-2212772 | None:intergenic | 35.0% | |
| CTTGTTCTACTAGGGAAAAA+AGG | - | chr8.1:2213271-2213290 | MS.gene012606:intron | 35.0% | |
| GAATTGCAACATACAGGTAA+TGG | - | chr8.1:2212011-2212030 | MS.gene012606:intron | 35.0% | |
| GACCTGGAAGGTTAAAAATA+GGG | - | chr8.1:2213005-2213024 | MS.gene012606:intron | 35.0% | |
| GCATAATGTATGTAAGGTTC+AGG | - | chr8.1:2210812-2210831 | MS.gene012606:CDS | 35.0% | |
| GGATATGGGGAAATATGTAT+TGG | - | chr8.1:2213336-2213355 | MS.gene012606:intron | 35.0% | |
| GTACATGTGAAACCAATGTT+TGG | - | chr8.1:2212935-2212954 | MS.gene012606:intron | 35.0% | |
| GTAGCAAAGTTATGGATATG+GGG | - | chr8.1:2213323-2213342 | MS.gene012606:intron | 35.0% | |
| GTCATAGAAATTGAAGTCTC+CGG | + | chr8.1:2212495-2212514 | None:intergenic | 35.0% | |
| TCAACTGAAAAATTGTCCCA+CGG | + | chr8.1:2210494-2210513 | None:intergenic | 35.0% | |
| TCAGGATGTAGGTATAGAAA+TGG | + | chr8.1:2212692-2212711 | None:intergenic | 35.0% | |
| TGGCATAGAAGAAAAATACC+TGG | + | chr8.1:2209590-2209609 | None:intergenic | 35.0% | |
| TTCTGCTAGAACTACTAGTT+TGG | + | chr8.1:2211595-2211614 | None:intergenic | 35.0% | |
| ! | ACACACATGATTTTGTCAAG+GGG | + | chr8.1:2212422-2212441 | None:intergenic | 35.0% |
| ! | ATTGGTTTCTGCAGAGTATT+TGG | - | chr8.1:2213354-2213373 | MS.gene012606:intron | 35.0% |
| ! | CAGCATGGTTGAACTTTTAT+AGG | - | chr8.1:2213395-2213414 | MS.gene012606:intron | 35.0% |
| ! | CCAACAACAAACCTCTTTTT+GGG | - | chr8.1:2212201-2212220 | MS.gene012606:intron | 35.0% |
| ! | GGAGCATTACTATACAAGAA+AGG | - | chr8.1:2212755-2212774 | MS.gene012606:intron | 35.0% |
| ! | GGTTGAACTTTTATAGGACA+TGG | - | chr8.1:2213401-2213420 | MS.gene012606:intron | 35.0% |
| ! | TAGTTAAGGTGCGTTTGTTA+AGG | - | chr8.1:2209888-2209907 | MS.gene012606:CDS | 35.0% |
| ! | TATCACCTAGTATTTTCGGA+CGG | + | chr8.1:2211306-2211325 | None:intergenic | 35.0% |
| ! | TATTTCTGCATGAATCCCTA+CGG | + | chr8.1:2210691-2210710 | None:intergenic | 35.0% |
| ! | TCCTCTTGCAACATTTCTTT+TGG | + | chr8.1:2213529-2213548 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGTATGATCAGC+TGG | + | chr8.1:2212875-2212894 | None:intergenic | 35.0% |
| ! | TGAACAACAGGTCTTTTTGT+TGG | + | chr8.1:2213211-2213230 | None:intergenic | 35.0% |
| ! | TGGACTTTTTACCCTTTCAA+TGG | - | chr8.1:2212983-2213002 | MS.gene012606:intron | 35.0% |
| ! | TTGGTTTCTGCAGAGTATTT+GGG | - | chr8.1:2213355-2213374 | MS.gene012606:intron | 35.0% |
| ! | TTTTCCACTTGGTTACAACT+AGG | + | chr8.1:2210450-2210469 | None:intergenic | 35.0% |
| !! | AAGTTCTGAAATGATCAGGT+TGG | - | chr8.1:2211520-2211539 | MS.gene012606:intron | 35.0% |
| !! | CCAAAAAGAGGTTTGTTGTT+GGG | + | chr8.1:2212203-2212222 | None:intergenic | 35.0% |
| !! | CGAAATTTCTTCGTCGATTT+GGG | - | chr8.1:2212466-2212485 | MS.gene012606:intron | 35.0% |
| !!! | AACCCTATTTTTAACCTTCC+AGG | + | chr8.1:2213010-2213029 | None:intergenic | 35.0% |
| !!! | AACTTTTTTTTTGTGGTGGC+CGG | + | chr8.1:2210847-2210866 | None:intergenic | 35.0% |
| !!! | CTTTTTTCCCTAGTAGAACA+AGG | + | chr8.1:2213273-2213292 | None:intergenic | 35.0% |
| !!! | GTCAATTGGTTTTTCTCCAA+TGG | - | chr8.1:2212734-2212753 | MS.gene012606:intron | 35.0% |
| !!! | TCTTTTTGGGTATGTTCTTG+TGG | - | chr8.1:2212214-2212233 | MS.gene012606:intron | 35.0% |
| AAAATTTGGGGAGCCATTGA+TGG | - | chr8.1:2212095-2212114 | MS.gene012606:intron | 40.0% | |
| AAATGGTACTAACCTTCCTC+AGG | - | chr8.1:2212808-2212827 | MS.gene012606:intron | 40.0% | |
| AATGGTACTAACCTTCCTCA+GGG | - | chr8.1:2212809-2212828 | MS.gene012606:intron | 40.0% | |
| ACGTTGATACTGTAGACACT+TGG | + | chr8.1:2212070-2212089 | None:intergenic | 40.0% | |
| AGTATCTTGTGTGCACAACA+GGG | + | chr8.1:2211389-2211408 | None:intergenic | 40.0% | |
| ATCACCTAGTTGTAACCAAG+TGG | - | chr8.1:2210443-2210462 | MS.gene012606:CDS | 40.0% | |
| ATGAGGAAATTCCCCTAATG+AGG | - | chr8.1:2210398-2210417 | MS.gene012606:CDS | 40.0% | |
| CACATCATAAGACAGGTTCA+TGG | - | chr8.1:2213134-2213153 | MS.gene012606:intron | 40.0% | |
| CAGCATGTGGATATGTTGAA+TGG | + | chr8.1:2213249-2213268 | None:intergenic | 40.0% | |
| CATCATATCTTCGTTCAGGT+TGG | + | chr8.1:2211145-2211164 | None:intergenic | 40.0% | |
| CATGTGAAACCAATGTTTGG+AGG | - | chr8.1:2212938-2212957 | MS.gene012606:intron | 40.0% | |
| CATTCAACATATCCACATGC+TGG | - | chr8.1:2213247-2213266 | MS.gene012606:intron | 40.0% | |
| CCACATTGCAAAATCAGTGA+AGG | + | chr8.1:2212966-2212985 | None:intergenic | 40.0% | |
| CCTAACATAGAGAATCCTTG+AGG | + | chr8.1:2212167-2212186 | None:intergenic | 40.0% | |
| CCTAGACCAATAGCACAAAA+TGG | - | chr8.1:2212791-2212810 | MS.gene012606:intron | 40.0% | |
| CCTCAAGGATTCTCTATGTT+AGG | - | chr8.1:2212164-2212183 | MS.gene012606:intron | 40.0% | |
| GACGTTAGACCAATAAGTAG+AGG | - | chr8.1:2212512-2212531 | MS.gene012606:intron | 40.0% | |
| GAGAGAATAGGTGAACATGT+TGG | - | chr8.1:2213046-2213065 | MS.gene012606:intron | 40.0% | |
| GCTTGAATACGGTATCAATG+GGG | + | chr8.1:2211876-2211895 | None:intergenic | 40.0% | |
| GCTTGAGTTCCTCTACTTAT+TGG | + | chr8.1:2212524-2212543 | None:intergenic | 40.0% | |
| GGACCTGGAAGGTTAAAAAT+AGG | - | chr8.1:2213004-2213023 | MS.gene012606:intron | 40.0% | |
| GTAAAGTTAAAGAGCCAGCA+TGG | - | chr8.1:2213380-2213399 | MS.gene012606:intron | 40.0% | |
| GTTGTTCATGCTTCATTGCA+TGG | - | chr8.1:2213223-2213242 | MS.gene012606:intron | 40.0% | |
| TGCAATGAAGCATGAACAAC+AGG | + | chr8.1:2213223-2213242 | None:intergenic | 40.0% | |
| TGCAGTTGGAAGCTTGAATA+CGG | + | chr8.1:2211887-2211906 | None:intergenic | 40.0% | |
| TGTTTGTATGATCAGCTGGT+AGG | + | chr8.1:2212871-2212890 | None:intergenic | 40.0% | |
| TGTTTGTGTTGTGCTTCTCA+TGG | - | chr8.1:2209523-2209542 | MS.gene012606:CDS | 40.0% | |
| TTCCAACTGCAACTACTTCT+TGG | - | chr8.1:2211896-2211915 | MS.gene012606:intron | 40.0% | |
| ! | AATCCTTGAGGTATTCCTGT+TGG | + | chr8.1:2212155-2212174 | None:intergenic | 40.0% |
| ! | ATCACCTAGTATTTTCGGAC+GGG | + | chr8.1:2211305-2211324 | None:intergenic | 40.0% |
| ! | CCCAACAACAAACCTCTTTT+TGG | - | chr8.1:2212200-2212219 | MS.gene012606:intron | 40.0% |
| ! | GCGAAATTTCTTCGTCGATT+TGG | - | chr8.1:2212465-2212484 | MS.gene012606:intron | 40.0% |
| ! | GGCACTTTTGTTGCACAAAA+TGG | - | chr8.1:2212560-2212579 | MS.gene012606:intron | 40.0% |
| ! | TGGTTTCTGCAGAGTATTTG+GGG | - | chr8.1:2213356-2213375 | MS.gene012606:intron | 40.0% |
| ! | TTCTTTTCCTTTGGACCTGT+TGG | + | chr8.1:2213556-2213575 | None:intergenic | 40.0% |
| ! | TTTTACCCTTTCAATGGACC+TGG | - | chr8.1:2212989-2213008 | MS.gene012606:intron | 40.0% |
| !! | AAAAGCACTCAGCCTCATTA+GGG | + | chr8.1:2210413-2210432 | None:intergenic | 40.0% |
| !! | AAAGAGGTTTGTTGTTGGGT+TGG | + | chr8.1:2212199-2212218 | None:intergenic | 40.0% |
| !! | CCATTTTGTGCTATTGGTCT+AGG | + | chr8.1:2212794-2212813 | None:intergenic | 40.0% |
| !! | CCCAAAAAGAGGTTTGTTGT+TGG | + | chr8.1:2212204-2212223 | None:intergenic | 40.0% |
| !! | TAAAAGCACTCAGCCTCATT+AGG | + | chr8.1:2210414-2210433 | None:intergenic | 40.0% |
| !! | TGCCAAGTTCTGAAATGATC+AGG | - | chr8.1:2211516-2211535 | MS.gene012606:intron | 40.0% |
| !! | TGGCTTTAATGTGCTCTTTG+TGG | + | chr8.1:2212261-2212280 | None:intergenic | 40.0% |
| !!! | ACTTTTTTTTTGTGGTGGCC+GGG | + | chr8.1:2210846-2210865 | None:intergenic | 40.0% |
| !!! | AGTTGGGGTTTTTTTCCACT+TGG | + | chr8.1:2210461-2210480 | None:intergenic | 40.0% |
| !!! | CCTTCACTGATTTTGCAATG+TGG | - | chr8.1:2212963-2212982 | MS.gene012606:intron | 40.0% |
| AAACGGTCACACAACATTGC+CGG | + | chr8.1:2210625-2210644 | None:intergenic | 45.0% | |
| AACCTTCCAGGTCCATTGAA+AGG | + | chr8.1:2212998-2213017 | None:intergenic | 45.0% | |
| ACCTTCCAGGTCCATTGAAA+GGG | + | chr8.1:2212997-2213016 | None:intergenic | 45.0% | |
| ACTGAGGCTCCTTTATCATC+CGG | + | chr8.1:2212125-2212144 | None:intergenic | 45.0% | |
| AGCTGGTAGGTCTATCCAAT+AGG | + | chr8.1:2212858-2212877 | None:intergenic | 45.0% | |
| AGGGGAATTTCCTCATTAGG+TGG | + | chr8.1:2210394-2210413 | None:intergenic | 45.0% | |
| CAATTCTCTCTCTCACCGTA+GGG | - | chr8.1:2210673-2210692 | MS.gene012606:CDS | 45.0% | |
| CTACGGTGAGAGAGAGAATT+GGG | + | chr8.1:2210674-2210693 | None:intergenic | 45.0% | |
| GAACCAACAGGAATACCTCA+AGG | - | chr8.1:2212149-2212168 | MS.gene012606:intron | 45.0% | |
| GAGTATCTTGTGTGCACAAC+AGG | + | chr8.1:2211390-2211409 | None:intergenic | 45.0% | |
| GCAACTACTTCTTGGCCAAA+AGG | - | chr8.1:2211904-2211923 | MS.gene012606:intron | 45.0% | |
| GCACAAATGGGTCAAATTCC+AGG | - | chr8.1:2209569-2209588 | MS.gene012606:CDS | 45.0% | |
| GGGGAATTTCCTCATTAGGT+GGG | + | chr8.1:2210393-2210412 | None:intergenic | 45.0% | |
| GTGAAGGTTCCTCCAAACAT+TGG | + | chr8.1:2212950-2212969 | None:intergenic | 45.0% | |
| TACGGTGAGAGAGAGAATTG+GGG | + | chr8.1:2210673-2210692 | None:intergenic | 45.0% | |
| TGAAAAATTGTCCCACGGCT+TGG | + | chr8.1:2210489-2210508 | None:intergenic | 45.0% | |
| TGAATACGGTATCAATGGGG+CGG | + | chr8.1:2211873-2211892 | None:intergenic | 45.0% | |
| TGTTGTGCTTCTCATGGCAA+TGG | - | chr8.1:2209529-2209548 | MS.gene012606:CDS | 45.0% | |
| ! | AAAGCACTCAGCCTCATTAG+GGG | + | chr8.1:2210412-2210431 | None:intergenic | 45.0% |
| ! | ACTGGGAGCATGTGACATTA+AGG | - | chr8.1:2213071-2213090 | MS.gene012606:intron | 45.0% |
| ! | CACATGATTTTGTCAAGGGG+AGG | + | chr8.1:2212419-2212438 | None:intergenic | 45.0% |
| ! | CTGGGAGCATGTGACATTAA+GGG | - | chr8.1:2213072-2213091 | MS.gene012606:intron | 45.0% |
| ! | GGTTTCTGCAGAGTATTTGG+GGG | - | chr8.1:2213357-2213376 | MS.gene012606:intron | 45.0% |
| ! | GTTTCTGCAGAGTATTTGGG+GGG | - | chr8.1:2213358-2213377 | MS.gene012606:intron | 45.0% |
| ! | TGTTTAGGATTAGGACCCTG+AGG | + | chr8.1:2212827-2212846 | None:intergenic | 45.0% |
| !! | AGGTGAACATGTTGGTGACT+GGG | - | chr8.1:2213054-2213073 | MS.gene012606:intron | 45.0% |
| !! | ATGCTGGCCTTGTTCTACTA+GGG | - | chr8.1:2213263-2213282 | MS.gene012606:intron | 45.0% |
| !! | TAGGTGAACATGTTGGTGAC+TGG | - | chr8.1:2213053-2213072 | MS.gene012606:intron | 45.0% |
| !! | TCTTCGTCGATTTGGGAATC+CGG | - | chr8.1:2212473-2212492 | MS.gene012606:intron | 45.0% |
| !!! | CTCGTGTTTTAGTGACGACA+TGG | + | chr8.1:2212391-2212410 | None:intergenic | 45.0% |
| !!! | CTTTTTTTTTGTGGTGGCCG+GGG | + | chr8.1:2210845-2210864 | None:intergenic | 45.0% |
| !!! | TATTATCATTTTAAATATTA+AGG | - | chr8.1:2211110-2211129 | MS.gene012606:intron | 5.0% |
| AACGGTCACACAACATTGCC+GGG | + | chr8.1:2210624-2210643 | None:intergenic | 50.0% | |
| AAGGTTCAGGGTTCAAACCC+CGG | - | chr8.1:2210825-2210844 | MS.gene012606:CDS | 50.0% | |
| ACCCTTTCAATGGACCTGGA+AGG | - | chr8.1:2212993-2213012 | MS.gene012606:intron | 50.0% | |
| ACGGTGAGAGAGAGAATTGG+GGG | + | chr8.1:2210672-2210691 | None:intergenic | 50.0% | |
| AGTAGAACAAGGCCAGCATG+TGG | + | chr8.1:2213262-2213281 | None:intergenic | 50.0% | |
| AGTAGAGGAACTCAAGCTCG+AGG | - | chr8.1:2212527-2212546 | MS.gene012606:intron | 50.0% | |
| ATCATCCGGTCCACCATCAA+TGG | + | chr8.1:2212111-2212130 | None:intergenic | 50.0% | |
| ATTTGGGGAGCCATTGATGG+TGG | - | chr8.1:2212098-2212117 | MS.gene012606:intron | 50.0% | |
| CAATAGGCGCGGTCATGTTT+AGG | + | chr8.1:2212842-2212861 | None:intergenic | 50.0% | |
| CAGACCCGTCCGAAAATACT+AGG | - | chr8.1:2211298-2211317 | MS.gene012606:intron | 50.0% | |
| CCAAATGGCTACCGTGCTTT+AGG | - | chr8.1:2212365-2212384 | MS.gene012606:intron | 50.0% | |
| CCAACTTAGATCCAAGCCGT+GGG | - | chr8.1:2210475-2210494 | MS.gene012606:CDS | 50.0% | |
| CCAATTCTCTCTCTCACCGT+AGG | - | chr8.1:2210672-2210691 | MS.gene012606:CDS | 50.0% | |
| CCTAAAGCACGGTAGCCATT+TGG | + | chr8.1:2212368-2212387 | None:intergenic | 50.0% | |
| CCTACGGTGAGAGAGAGAAT+TGG | + | chr8.1:2210675-2210694 | None:intergenic | 50.0% | |
| CCTAGAGCAGCTGCACAAAT+GGG | - | chr8.1:2209557-2209576 | MS.gene012606:CDS | 50.0% | |
| CTAAACATGACCGCGCCTAT+TGG | - | chr8.1:2212840-2212859 | MS.gene012606:intron | 50.0% | |
| GAATACGGTATCAATGGGGC+GGG | + | chr8.1:2211872-2211891 | None:intergenic | 50.0% | |
| GGCCAAGAAGTAGTTGCAGT+TGG | + | chr8.1:2211901-2211920 | None:intergenic | 50.0% | |
| GTAGGTCTATCCAATAGGCG+CGG | + | chr8.1:2212853-2212872 | None:intergenic | 50.0% | |
| TAGGATTAGGACCCTGAGGA+AGG | + | chr8.1:2212823-2212842 | None:intergenic | 50.0% | |
| TCCTAGAGCAGCTGCACAAA+TGG | - | chr8.1:2209556-2209575 | MS.gene012606:CDS | 50.0% | |
| TGACGACATGGCCTAAAGCA+CGG | + | chr8.1:2212379-2212398 | None:intergenic | 50.0% | |
| TGGCTACCAGTAGCTCCAAA+TGG | - | chr8.1:2212350-2212369 | MS.gene012606:intron | 50.0% | |
| TGTGCTTCTCATGGCAATGG+AGG | - | chr8.1:2209532-2209551 | MS.gene012606:CDS | 50.0% | |
| TTGCAAGAGGAAGGACCAAC+AGG | - | chr8.1:2213538-2213557 | MS.gene012606:CDS | 50.0% | |
| ! | ACAGGTAATGGTTTCGCGAG+AGG | - | chr8.1:2212023-2212042 | MS.gene012606:intron | 50.0% |
| ! | CAAGCTCGAGGCATTCATGT+AGG | - | chr8.1:2212539-2212558 | MS.gene012606:intron | 50.0% |
| ! | CACGGCTTGGATCTAAGTTG+GGG | + | chr8.1:2210476-2210495 | None:intergenic | 50.0% |
| ! | CCACGGCTTGGATCTAAGTT+GGG | + | chr8.1:2210477-2210496 | None:intergenic | 50.0% |
| ! | GCGCGGTCATGTTTAGGATT+AGG | + | chr8.1:2212836-2212855 | None:intergenic | 50.0% |
| !! | CATGCTGGCCTTGTTCTACT+AGG | - | chr8.1:2213262-2213281 | MS.gene012606:intron | 50.0% |
| !! | GATGGTGGACCGGATGATAA+AGG | - | chr8.1:2212113-2212132 | MS.gene012606:intron | 50.0% |
| !! | TCCTGTTGGTTCGAACACTG+AGG | + | chr8.1:2212141-2212160 | None:intergenic | 50.0% |
| AGAGGAGTCCTCGATCTAGG+TGG | - | chr8.1:2212041-2212060 | MS.gene012606:intron | 55.0% | |
| CCCAACTTAGATCCAAGCCG+TGG | - | chr8.1:2210474-2210493 | MS.gene012606:CDS | 55.0% | |
| CCCATTTGTGCAGCTGCTCT+AGG | + | chr8.1:2209560-2209579 | None:intergenic | 55.0% | |
| GAGGAGTCCTCGATCTAGGT+GGG | - | chr8.1:2212042-2212061 | MS.gene012606:intron | 55.0% | |
| GCCTCAGTGTTCGAACCAAC+AGG | - | chr8.1:2212137-2212156 | MS.gene012606:intron | 55.0% | |
| GGAAGGACCAACAGGTCCAA+AGG | - | chr8.1:2213546-2213565 | MS.gene012606:CDS | 55.0% | |
| ! | CCCACGGCTTGGATCTAAGT+TGG | + | chr8.1:2210478-2210497 | None:intergenic | 55.0% |
| ! | CGGTAGCCATTTGGAGCTAC+TGG | + | chr8.1:2212359-2212378 | None:intergenic | 55.0% |
| CTTGGAGCCCACCTAGATCG+AGG | + | chr8.1:2212052-2212071 | None:intergenic | 60.0% | |
| GCGAGAGGAGTCCTCGATCT+AGG | - | chr8.1:2212038-2212057 | MS.gene012606:intron | 60.0% | |
| !! | GGGAGCCATTGATGGTGGAC+CGG | - | chr8.1:2212103-2212122 | MS.gene012606:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 2209497 | 2213600 | 2209497 | ID=MS.gene012606 |
| chr8.1 | mRNA | 2209497 | 2213600 | 2209497 | ID=MS.gene012606.t1;Parent=MS.gene012606 |
| chr8.1 | exon | 2213507 | 2213600 | 2213507 | ID=MS.gene012606.t1.exon1;Parent=MS.gene012606.t1 |
| chr8.1 | CDS | 2213507 | 2213600 | 2213507 | ID=cds.MS.gene012606.t1;Parent=MS.gene012606.t1 |
| chr8.1 | exon | 2211172 | 2211264 | 2211172 | ID=MS.gene012606.t1.exon2;Parent=MS.gene012606.t1 |
| chr8.1 | CDS | 2211172 | 2211264 | 2211172 | ID=cds.MS.gene012606.t1;Parent=MS.gene012606.t1 |
| chr8.1 | exon | 2209497 | 2211070 | 2209497 | ID=MS.gene012606.t1.exon3;Parent=MS.gene012606.t1 |
| chr8.1 | CDS | 2209497 | 2211070 | 2209497 | ID=cds.MS.gene012606.t1;Parent=MS.gene012606.t1 |
| Gene Sequence |
| Protein sequence |
