Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042258.t1 | AES92588.1 | 96.2 | 586 | 22 | 0 | 1 | 586 | 1 | 586 | 0.00E+00 | 1180.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042258.t1 | G7JI01 | 96.2 | 586 | 22 | 0 | 1 | 586 | 1 | 586 | 0.0e+00 | 1180.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042258 | MS.gene005095 | PPI |
| MS.gene061203 | MS.gene042258 | PPI |
| MS.gene042258 | MS.gene52616 | PPI |
| MS.gene043858 | MS.gene042258 | PPI |
| MS.gene60886 | MS.gene042258 | PPI |
| MS.gene042258 | MS.gene000191 | PPI |
| MS.gene042258 | MS.gene012606 | PPI |
| MS.gene042258 | MS.gene60889 | PPI |
| MS.gene042258 | MS.gene000192 | PPI |
| MS.gene042258 | MS.gene60887 | PPI |
| MS.gene042258 | MS.gene000190 | PPI |
| MS.gene042258 | MS.gene005097 | PPI |
| MS.gene042258 | MS.gene33537 | PPI |
| MS.gene042258 | MS.gene52609 | PPI |
| MS.gene042258 | MS.gene043855 | PPI |
| MS.gene60883 | MS.gene042258 | PPI |
| MS.gene042258 | MS.gene60884 | PPI |
| MS.gene042258 | MS.gene60888 | PPI |
| MS.gene042258 | MS.gene005092 | PPI |
| MS.gene042258 | MS.gene042257 | PPI |
| MS.gene042258 | MS.gene43969 | PPI |
| MS.gene042258 | MS.gene043859 | PPI |
| MS.gene042258 | MS.gene036431 | PPI |
| MS.gene042258 | MS.gene60881 | PPI |
| MS.gene042258 | MS.gene000193 | PPI |
| MS.gene042258 | MS.gene036433 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042258.t1 | MTR_4g131710 | 96.246 | 586 | 22 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1174 |
| MS.gene042258.t1 | MTR_2g062410 | 74.320 | 588 | 141 | 4 | 3 | 586 | 5 | 586 | 0.0 | 891 |
| MS.gene042258.t1 | MTR_2g062370 | 71.332 | 593 | 160 | 4 | 1 | 586 | 1 | 590 | 0.0 | 861 |
| MS.gene042258.t1 | MTR_2g062430 | 70.833 | 552 | 150 | 2 | 35 | 586 | 13 | 553 | 0.0 | 827 |
| MS.gene042258.t1 | MTR_2g062380 | 69.466 | 524 | 157 | 2 | 63 | 586 | 40 | 560 | 0.0 | 778 |
| MS.gene042258.t1 | MTR_2g067640 | 56.443 | 551 | 206 | 10 | 46 | 586 | 15 | 541 | 0.0 | 618 |
| MS.gene042258.t1 | MTR_2g062340 | 50.987 | 557 | 215 | 11 | 38 | 585 | 9 | 516 | 0.0 | 548 |
| MS.gene042258.t1 | MTR_1g080370 | 44.283 | 551 | 276 | 10 | 51 | 585 | 23 | 558 | 1.90e-163 | 478 |
| MS.gene042258.t1 | MTR_1g080410 | 44.283 | 551 | 276 | 10 | 51 | 585 | 23 | 558 | 1.90e-163 | 478 |
| MS.gene042258.t1 | MTR_5g007860 | 42.933 | 566 | 289 | 9 | 43 | 585 | 51 | 605 | 1.05e-159 | 470 |
| MS.gene042258.t1 | MTR_4g077620 | 43.950 | 562 | 280 | 13 | 44 | 585 | 21 | 567 | 1.14e-156 | 461 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042258.t1 | AT2G44260 | 51.730 | 549 | 250 | 6 | 39 | 585 | 17 | 552 | 0.0 | 592 |
| MS.gene042258.t1 | AT2G44230 | 51.259 | 556 | 250 | 7 | 35 | 586 | 4 | 542 | 0.0 | 587 |
| MS.gene042258.t1 | AT2G44260 | 52.952 | 525 | 232 | 6 | 63 | 585 | 71 | 582 | 0.0 | 578 |
| MS.gene042258.t1 | AT3G01870 | 43.655 | 591 | 302 | 10 | 8 | 585 | 11 | 583 | 4.57e-169 | 493 |
| MS.gene042258.t1 | AT3G01880 | 45.848 | 554 | 273 | 10 | 42 | 585 | 53 | 589 | 6.63e-166 | 485 |
| MS.gene042258.t1 | AT5G18490 | 44.891 | 548 | 270 | 10 | 51 | 586 | 25 | 552 | 3.11e-164 | 479 |
| MS.gene042258.t1 | AT3G04350 | 43.784 | 555 | 279 | 10 | 51 | 586 | 26 | 566 | 4.23e-161 | 472 |
| MS.gene042258.t1 | AT3G04350 | 43.194 | 551 | 280 | 10 | 55 | 586 | 8 | 544 | 2.08e-156 | 459 |
| MS.gene042258.t1 | AT5G43950 | 42.238 | 554 | 290 | 11 | 50 | 585 | 23 | 564 | 9.16e-151 | 446 |
| MS.gene042258.t1 | AT1G04090 | 43.137 | 561 | 281 | 14 | 50 | 585 | 23 | 570 | 1.24e-150 | 446 |
Find 124 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAACGTTTAACAAAATT+TGG | 0.066286 | 8.4:-1887061 | MS.gene042258:CDS |
| CAAAATTGCTAGTATCATTT+TGG | 0.131465 | 8.4:+1885962 | None:intergenic |
| CGAAATTTCTTCGTCGATTT+GGG | 0.192513 | 8.4:-1886676 | MS.gene042258:CDS |
| GCGAAATTTCTTCGTCGATT+TGG | 0.194682 | 8.4:-1886677 | MS.gene042258:CDS |
| GACATTAAGGGTAAGTAATT+TGG | 0.218905 | 8.4:-1886058 | MS.gene042258:CDS |
| GCTTGAGTTCCTCTACTTAT+TGG | 0.237504 | 8.4:+1886621 | None:intergenic |
| TCCTCTTGCAACATTTCTTT+TGG | 0.247710 | 8.4:+1885616 | None:intergenic |
| GTAATTTGGATGGTAAATTA+TGG | 0.253190 | 8.4:-1886044 | MS.gene042258:CDS |
| TGATCTTTGAAATGGAATTA+AGG | 0.258367 | 8.4:+1886520 | None:intergenic |
| TTCCAACTGCAACTACTTCT+TGG | 0.267862 | 8.4:-1887246 | MS.gene042258:CDS |
| ATCAACGTTTAACAAAATTT+GGG | 0.287048 | 8.4:-1887060 | MS.gene042258:CDS |
| ACTGGGAGCATGTGACATTA+AGG | 0.288797 | 8.4:-1886071 | MS.gene042258:CDS |
| AAGTAACAAAGTTATGGATA+TGG | 0.311164 | 8.4:-1885821 | MS.gene042258:CDS |
| CAAAATTTGAGTAGCTGAAT+AGG | 0.318702 | 8.4:+1886827 | None:intergenic |
| CAATAGGCGCGGTCATGTTT+AGG | 0.320126 | 8.4:+1886303 | None:intergenic |
| CTAAACATGACCGCGCCTAT+TGG | 0.333364 | 8.4:-1886302 | MS.gene042258:CDS |
| AAATTGAAGAAGTTGTTTCT+AGG | 0.346682 | 8.4:-1885679 | MS.gene042258:CDS |
| CATGCTGGCCTTGTTCTACT+AGG | 0.347802 | 8.4:-1885880 | MS.gene042258:CDS |
| GCTTTAATTTGTTGTAGATT+AGG | 0.348824 | 8.4:+1886495 | None:intergenic |
| CCAAATGGCTACCGTGCTTT+AGG | 0.353128 | 8.4:-1886777 | MS.gene042258:CDS |
| GCGCGGTCATGTTTAGGATT+AGG | 0.354023 | 8.4:+1886309 | None:intergenic |
| CTGATCATACAAACAAAGAT+AGG | 0.360712 | 8.4:-1886266 | MS.gene042258:CDS |
| TCCTAGAGCAGCTGCACAAA+TGG | 0.376330 | 8.4:-1889560 | MS.gene042258:CDS |
| AATACAAATGTGTAATCAAT+TGG | 0.386535 | 8.4:+1886861 | None:intergenic |
| CCTAGACCAATAGCACAAAA+TGG | 0.392047 | 8.4:-1886351 | MS.gene042258:CDS |
| CCTAAAGCACGGTAGCCATT+TGG | 0.392578 | 8.4:+1886777 | None:intergenic |
| ATTAGGCATGATCTTTGAAA+TGG | 0.397170 | 8.4:+1886512 | None:intergenic |
| GGATATGGGGAAATATGTAT+TGG | 0.401878 | 8.4:-1885806 | MS.gene042258:CDS |
| GCACAAATGGGTCAAATTCC+AGG | 0.402115 | 8.4:-1889547 | MS.gene042258:intron |
| AGTAACAAAGTTATGGATAT+GGG | 0.402734 | 8.4:-1885820 | MS.gene042258:CDS |
| TGGTTTCTGCAGAGTATTTG+AGG | 0.402772 | 8.4:-1885786 | MS.gene042258:CDS |
| AGCTTGAATACGGTATCAAT+GGG | 0.415583 | 8.4:+1887268 | None:intergenic |
| CCTCAAGGATTCTCTATGTT+AGG | 0.416568 | 8.4:-1886978 | MS.gene042258:CDS |
| AAAATTTGGGGAGCCATTGA+TGG | 0.426406 | 8.4:-1887047 | MS.gene042258:CDS |
| TGGCTTTAATGTGCTCTTTG+TGG | 0.427124 | 8.4:+1886884 | None:intergenic |
| ACTTACCTTCATCAGTCAAT+TGG | 0.427526 | 8.4:-1886422 | MS.gene042258:CDS |
| AATTGAAGAAGTTGTTTCTA+GGG | 0.430110 | 8.4:-1885678 | MS.gene042258:CDS |
| GATGGTGGACCGGATGATAA+AGG | 0.432800 | 8.4:-1887029 | MS.gene042258:CDS |
| CTTGTATAGTAATGCTCCAT+TGG | 0.433338 | 8.4:+1886392 | None:intergenic |
| TGCAATGAAGCATGAACAAC+AGG | 0.439399 | 8.4:+1885922 | None:intergenic |
| TCTTTGTTTGTATGATCAGC+TGG | 0.440103 | 8.4:+1886270 | None:intergenic |
| CACATCATAAGACAGGTTCA+TGG | 0.444967 | 8.4:-1886008 | MS.gene042258:CDS |
| GCCTCAGTGTTCGAACCAAC+AGG | 0.448044 | 8.4:-1887005 | MS.gene042258:CDS |
| GCGAGAGGAGTCCTCGATCT+AGG | 0.448860 | 8.4:-1887104 | MS.gene042258:CDS |
| TCAGGATGTAGGTATAGAAA+TGG | 0.449014 | 8.4:+1886453 | None:intergenic |
| CGGTAGCCATTTGGAGCTAC+TGG | 0.451064 | 8.4:+1886786 | None:intergenic |
| TCTTCGTCGATTTGGGAATC+CGG | 0.451276 | 8.4:-1886669 | MS.gene042258:CDS |
| GTACATGTGAAACCAATGTT+TGG | 0.455920 | 8.4:-1886207 | MS.gene042258:CDS |
| TTGCAAGAGGAAGGACCAAC+AGG | 0.458852 | 8.4:-1885604 | MS.gene042258:CDS |
| GCAACTACTTCTTGGCCAAA+AGG | 0.466697 | 8.4:-1887238 | MS.gene042258:intron |
| AAGCTTGAATACGGTATCAA+TGG | 0.471010 | 8.4:+1887267 | None:intergenic |
| TGCAGTTGGAAGCTTGAATA+CGG | 0.472456 | 8.4:+1887258 | None:intergenic |
| AACCTTCCAGGTCCATTGAA+AGG | 0.472890 | 8.4:+1886147 | None:intergenic |
| ACCTTCCAGGTCCATTGAAA+GGG | 0.477333 | 8.4:+1886148 | None:intergenic |
| GTTGTTCATGCTTCATTGCA+TGG | 0.479910 | 8.4:-1885919 | MS.gene042258:CDS |
| GGTTTCTGCAGAGTATTTGA+GGG | 0.480067 | 8.4:-1885785 | MS.gene042258:CDS |
| TGTTTGTGTTGTGCTTCTCA+TGG | 0.488786 | 8.4:-1889593 | MS.gene042258:CDS |
| CCCATTTGTGCAGCTGCTCT+AGG | 0.491596 | 8.4:+1889559 | None:intergenic |
| ATCATCCGGTCCACCATCAA+TGG | 0.492503 | 8.4:+1887034 | None:intergenic |
| AAATGGTACTAACCTTCCTC+AGG | 0.498248 | 8.4:-1886334 | MS.gene042258:CDS |
| AATGTTAAATTAGAGAGAAT+AGG | 0.502401 | 8.4:-1886108 | MS.gene042258:CDS |
| CTGGGAGCATGTGACATTAA+GGG | 0.504616 | 8.4:-1886070 | MS.gene042258:CDS |
| AGCTGGTAGGTCTATCCAAT+AGG | 0.505188 | 8.4:+1886287 | None:intergenic |
| CTATAAAAGTTCAACCATGC+TGG | 0.506747 | 8.4:+1885748 | None:intergenic |
| GTCATAGAAATTGAAGTCTC+CGG | 0.508375 | 8.4:+1886650 | None:intergenic |
| AAAGAGGTTTGTTGTTGGGT+TGG | 0.517837 | 8.4:+1886946 | None:intergenic |
| CCTAGAGCAGCTGCACAAAT+GGG | 0.519510 | 8.4:-1889559 | MS.gene042258:CDS |
| GGGAGCCATTGATGGTGGAC+CGG | 0.519648 | 8.4:-1887039 | MS.gene042258:CDS |
| TAGGTGAACATGTTGGTGAC+TGG | 0.528649 | 8.4:-1886089 | MS.gene042258:CDS |
| TGTTGTGCTTCTCATGGCAA+TGG | 0.533813 | 8.4:-1889587 | MS.gene042258:CDS |
| TATTTCTCACATCATAAGAC+AGG | 0.534217 | 8.4:-1886015 | MS.gene042258:CDS |
| TGTTTGTATGATCAGCTGGT+AGG | 0.536283 | 8.4:+1886274 | None:intergenic |
| ACCAAAAGAAATGTTGCAAG+AGG | 0.544639 | 8.4:-1885617 | MS.gene042258:CDS |
| ACAAATGTGTAATCAATTGG+TGG | 0.545480 | 8.4:+1886864 | None:intergenic |
| GGAAGGACCAACAGGTCCAA+AGG | 0.546506 | 8.4:-1885596 | MS.gene042258:CDS |
| TTCAAACATGAAATAGATGG+AGG | 0.547187 | 8.4:+1886546 | None:intergenic |
| ACTGAGGCTCCTTTATCATC+CGG | 0.547432 | 8.4:+1887020 | None:intergenic |
| GTGAAGGTTCCTCCAAACAT+TGG | 0.547819 | 8.4:+1886195 | None:intergenic |
| AATCCTTGAGGTATTCCTGT+TGG | 0.552718 | 8.4:+1886990 | None:intergenic |
| GGCCAAGAAGTAGTTGCAGT+TGG | 0.554452 | 8.4:+1887244 | None:intergenic |
| TGGCTACCAGTAGCTCCAAA+TGG | 0.555141 | 8.4:-1886792 | MS.gene042258:CDS |
| GAATACGGTATCAATGGGGC+GGG | 0.557209 | 8.4:+1887273 | None:intergenic |
| AAAGAAATGTTGCAAGAGGA+AGG | 0.566876 | 8.4:-1885613 | MS.gene042258:CDS |
| GGAGCATTACTATACAAGAA+AGG | 0.567167 | 8.4:-1886387 | MS.gene042258:CDS |
| ATGCTGGCCTTGTTCTACTA+GGG | 0.569406 | 8.4:-1885879 | MS.gene042258:CDS |
| TCTAACTTATAGTCAACATG+TGG | 0.575589 | 8.4:+1885715 | None:intergenic |
| ATTTGGGGAGCCATTGATGG+TGG | 0.576760 | 8.4:-1887044 | MS.gene042258:CDS |
| CAAGCTCGAGGCATTCATGT+AGG | 0.578639 | 8.4:-1886603 | MS.gene042258:CDS |
| TGATCATACAAACAAAGATA+GGG | 0.582823 | 8.4:-1886265 | MS.gene042258:CDS |
| TAGGATTAGGACCCTGAGGA+AGG | 0.585115 | 8.4:+1886322 | None:intergenic |
| ACCCTTTCAATGGACCTGGA+AGG | 0.585334 | 8.4:-1886149 | MS.gene042258:CDS |
| CATTCAACATATCCACATGC+TGG | 0.585598 | 8.4:-1885895 | MS.gene042258:CDS |
| CAGCATGTGGATATGTTGAA+TGG | 0.587256 | 8.4:+1885896 | None:intergenic |
| TCAAACATGAAATAGATGGA+GGG | 0.594887 | 8.4:+1886547 | None:intergenic |
| TTAAGGGTAAGTAATTTGGA+TGG | 0.595987 | 8.4:-1886054 | MS.gene042258:CDS |
| AGGTGAACATGTTGGTGACT+GGG | 0.596607 | 8.4:-1886088 | MS.gene042258:CDS |
| ACAGGTAATGGTTTCGCGAG+AGG | 0.598849 | 8.4:-1887119 | MS.gene042258:intron |
| GTAACAAAGTTATGGATATG+GGG | 0.600950 | 8.4:-1885819 | MS.gene042258:CDS |
| TCAACGTTTAACAAAATTTG+GGG | 0.601243 | 8.4:-1887059 | MS.gene042258:CDS |
| ACGTTGATACTGTAGACACT+TGG | 0.605593 | 8.4:+1887075 | None:intergenic |
| GAGAGAATAGGTGAACATGT+TGG | 0.607765 | 8.4:-1886096 | MS.gene042258:CDS |
| AGAGGAGTCCTCGATCTAGG+TGG | 0.612378 | 8.4:-1887101 | MS.gene042258:CDS |
| GAGGAGTCCTCGATCTAGGT+GGG | 0.614351 | 8.4:-1887100 | MS.gene042258:CDS |
| CATGTGAAACCAATGTTTGG+AGG | 0.614379 | 8.4:-1886204 | MS.gene042258:CDS |
| AAATTTCGCATTTCTCTGTG+AGG | 0.618922 | 8.4:+1886691 | None:intergenic |
| CCACATTGCAAAATCAGTGA+AGG | 0.620887 | 8.4:+1886179 | None:intergenic |
| TGAATACGGTATCAATGGGG+CGG | 0.624090 | 8.4:+1887272 | None:intergenic |
| TGACGACATGGCCTAAAGCA+CGG | 0.634701 | 8.4:+1886766 | None:intergenic |
| GACGTTAGACCAATAAGTAG+AGG | 0.639362 | 8.4:-1886630 | MS.gene042258:CDS |
| GTAAAGTTAAAGAGCCAGCA+TGG | 0.641409 | 8.4:-1885762 | MS.gene042258:CDS |
| GTTTCTGCAGAGTATTTGAG+GGG | 0.641453 | 8.4:-1885784 | MS.gene042258:CDS |
| AGTAGAACAAGGCCAGCATG+TGG | 0.653698 | 8.4:+1885883 | None:intergenic |
| ACTGGTAGCCAAATATACAA+AGG | 0.659249 | 8.4:+1886804 | None:intergenic |
| AACAAAGATAGGGTCAAACA+AGG | 0.663777 | 8.4:-1886255 | MS.gene042258:CDS |
| CTTGGAGCCCACCTAGATCG+AGG | 0.667633 | 8.4:+1887093 | None:intergenic |
| GAACCAACAGGAATACCTCA+AGG | 0.672260 | 8.4:-1886993 | MS.gene042258:CDS |
| TCCTGTTGGTTCGAACACTG+AGG | 0.676070 | 8.4:+1887004 | None:intergenic |
| AGTAGAGGAACTCAAGCTCG+AGG | 0.676376 | 8.4:-1886615 | MS.gene042258:CDS |
| TGTTTAGGATTAGGACCCTG+AGG | 0.683877 | 8.4:+1886318 | None:intergenic |
| AATGGTACTAACCTTCCTCA+GGG | 0.693194 | 8.4:-1886333 | MS.gene042258:CDS |
| CCTAACATAGAGAATCCTTG+AGG | 0.700330 | 8.4:+1886978 | None:intergenic |
| CTAACTTATAGTCAACATGT+GGG | 0.708098 | 8.4:+1885716 | None:intergenic |
| GTAGGTCTATCCAATAGGCG+CGG | 0.731921 | 8.4:+1886292 | None:intergenic |
| GCTTGAATACGGTATCAATG+GGG | 0.743991 | 8.4:+1887269 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTTAAATTGTTTTTTT+AGG | + | chr8.4:1886615-1886634 | None:intergenic | 10.0% |
| !!! | ACTTTTAAATTGTTTTTTTA+GGG | + | chr8.4:1886614-1886633 | None:intergenic | 10.0% |
| !! | ACACTATAATATATCATAAA+AGG | + | chr8.4:1888000-1888019 | None:intergenic | 15.0% |
| !! | TTAAAAAGATAGAATATTGT+TGG | + | chr8.4:1885852-1885871 | None:intergenic | 15.0% |
| !! | TTATATATAAGAAAAAAGTG+AGG | - | chr8.4:1887236-1887255 | MS.gene042258:intron | 15.0% |
| !!! | ATGTTTTTGAAAAAGTTATT+AGG | - | chr8.4:1889538-1889557 | MS.gene042258:intron | 15.0% |
| !!! | GTAAAAATATCTTTAAGAAA+AGG | - | chr8.4:1887877-1887896 | MS.gene042258:intron | 15.0% |
| !!! | TATTTATTTGTTACAACTTT+TGG | + | chr8.4:1886301-1886320 | None:intergenic | 15.0% |
| !!! | TGTTTTTGAAAAAGTTATTA+GGG | - | chr8.4:1889539-1889558 | MS.gene042258:intron | 15.0% |
| !!! | TTTATACAACTTTTTTTTTG+TGG | + | chr8.4:1886896-1886915 | None:intergenic | 15.0% |
| !! | AACAAACAAAATCATTATTC+AGG | + | chr8.4:1886180-1886199 | None:intergenic | 20.0% |
| !! | AACAATGCATAATATATGTA+AGG | - | chr8.4:1886848-1886867 | MS.gene042258:CDS | 20.0% |
| !! | AATACAAATGTGTAATCAAT+TGG | + | chr8.4:1888325-1888344 | None:intergenic | 20.0% |
| !! | AATGTTAAATTAGAGAGAAT+AGG | - | chr8.4:1889075-1889094 | MS.gene042258:intron | 20.0% |
| !! | ATCAACGTTTAACAAAATTT+GGG | - | chr8.4:1888123-1888142 | MS.gene042258:intron | 20.0% |
| !! | ATTAGATCTAATTAATTCAG+CGG | - | chr8.4:1885826-1885845 | MS.gene042258:CDS | 20.0% |
| !! | GTGTTAATGCAAATATAATA+AGG | + | chr8.4:1887812-1887831 | None:intergenic | 20.0% |
| !! | TAAGAAAAGTAAAGTAACAA+TGG | + | chr8.4:1885677-1885696 | None:intergenic | 20.0% |
| !! | TATCAACGTTTAACAAAATT+TGG | - | chr8.4:1888122-1888141 | MS.gene042258:intron | 20.0% |
| !! | TGAAAAAAGTAACAAAGTTA+TGG | - | chr8.4:1889356-1889375 | MS.gene042258:intron | 20.0% |
| !!! | AAATTACTTCAAACTTTTGA+CGG | - | chr8.4:1886236-1886255 | MS.gene042258:CDS | 20.0% |
| !!! | AAATTTTGCCTTTGTATATT+TGG | - | chr8.4:1888371-1888390 | MS.gene042258:intron | 20.0% |
| !!! | AATCTAACTATAAGCTTTTA+AGG | - | chr8.4:1887110-1887129 | MS.gene042258:CDS | 20.0% |
| !!! | GTTTTTGAAAAAGTTATTAG+GGG | - | chr8.4:1889540-1889559 | MS.gene042258:intron | 20.0% |
| !!! | TTTATTCTTTGAAAAATGCT+TGG | + | chr8.4:1886690-1886709 | None:intergenic | 20.0% |
| !!! | TTTTTCAAACATGAAATAGA+TGG | + | chr8.4:1888643-1888662 | None:intergenic | 20.0% |
| ! | AAGGAAAAGAAAAATTGGAA+TGG | - | chr8.4:1889606-1889625 | MS.gene042258:CDS | 25.0% |
| ! | AAGTAACAAAGTTATGGATA+TGG | - | chr8.4:1889362-1889381 | MS.gene042258:intron | 25.0% |
| ! | AGTAACAAAGTTATGGATAT+GGG | - | chr8.4:1889363-1889382 | MS.gene042258:intron | 25.0% |
| ! | ATCATAAAAGGAGAGAAAAA+TGG | + | chr8.4:1887988-1888007 | None:intergenic | 25.0% |
| ! | CACATTAACATATTCTTACA+TGG | + | chr8.4:1887454-1887473 | None:intergenic | 25.0% |
| ! | CATAATATATGTAAGGTTCA+GGG | - | chr8.4:1886855-1886874 | MS.gene042258:CDS | 25.0% |
| ! | CTATGAAAATGTGTCTTTAA+TGG | + | chr8.4:1886983-1887002 | None:intergenic | 25.0% |
| ! | CTATTCTAATCATTATATCC+TGG | + | chr8.4:1886927-1886946 | None:intergenic | 25.0% |
| ! | CTTGGAATATCAAAAAACTA+TGG | + | chr8.4:1886370-1886389 | None:intergenic | 25.0% |
| ! | GAAAAAAGTGAGGTAAAAAA+AGG | - | chr8.4:1887246-1887265 | MS.gene042258:CDS | 25.0% |
| ! | GAAAAATGGAAATCAAATGA+TGG | + | chr8.4:1887974-1887993 | None:intergenic | 25.0% |
| ! | GTAATTTGGATGGTAAATTA+TGG | - | chr8.4:1889139-1889158 | MS.gene042258:intron | 25.0% |
| ! | GTTGTATAAATCAAATTACC+AGG | - | chr8.4:1886906-1886925 | MS.gene042258:CDS | 25.0% |
| ! | GTTTGCGACAAAAAAATAAA+TGG | - | chr8.4:1886957-1886976 | MS.gene042258:CDS | 25.0% |
| ! | TAGATCTAATGATTGAGATT+TGG | + | chr8.4:1885816-1885835 | None:intergenic | 25.0% |
| ! | TCAACGTTTAACAAAATTTG+GGG | - | chr8.4:1888124-1888143 | MS.gene042258:intron | 25.0% |
| ! | TCGCACATTGAAAATATATA+AGG | - | chr8.4:1887684-1887703 | MS.gene042258:intron | 25.0% |
| ! | TCTGTAAAAGTAATCGTAAA+AGG | + | chr8.4:1887324-1887343 | None:intergenic | 25.0% |
| ! | TGATCATACAAACAAAGATA+GGG | - | chr8.4:1888918-1888937 | MS.gene042258:intron | 25.0% |
| ! | TGGATTTGTCAACAAAAAAA+AGG | + | chr8.4:1886152-1886171 | None:intergenic | 25.0% |
| ! | TGTGTCTTTAGTTAGTTAAT+AGG | + | chr8.4:1887015-1887034 | None:intergenic | 25.0% |
| ! | TTTCAGTTGAAATCCAATTA+CGG | - | chr8.4:1886546-1886565 | MS.gene042258:CDS | 25.0% |
| ! | TTTCATGCAGAAATATTGAA+TGG | - | chr8.4:1886738-1886757 | MS.gene042258:CDS | 25.0% |
| ! | TTTGTAAAAAAAACTTCACC+CGG | - | chr8.4:1886644-1886663 | MS.gene042258:CDS | 25.0% |
| !! | ACAATATCACCTAGTATTTT+CGG | + | chr8.4:1887352-1887371 | None:intergenic | 25.0% |
| !! | CAAAATTGCTAGTATCATTT+TGG | + | chr8.4:1889224-1889243 | None:intergenic | 25.0% |
| !! | TTCCAATTTTTCTTTTCCTT+TGG | + | chr8.4:1889606-1889625 | None:intergenic | 25.0% |
| !! | TTTCTAGAGAAAAATACTCT+CGG | - | chr8.4:1887718-1887737 | MS.gene042258:intron | 25.0% |
| !!! | AAATTGAAGAAGTTGTTTCT+AGG | - | chr8.4:1889504-1889523 | MS.gene042258:intron | 25.0% |
| !!! | AATTGAAGAAGTTGTTTCTA+GGG | - | chr8.4:1889505-1889524 | MS.gene042258:intron | 25.0% |
| !!! | AGGTGTACAATACTATTTTT+AGG | - | chr8.4:1887266-1887285 | MS.gene042258:CDS | 25.0% |
| !!! | ATACAACTTTTTTTTTGTGG+TGG | + | chr8.4:1886893-1886912 | None:intergenic | 25.0% |
| !!! | CTTACATCACTTTTCATAAA+GGG | + | chr8.4:1887531-1887550 | None:intergenic | 25.0% |
| !!! | GCTTTAATTTGTTGTAGATT+AGG | + | chr8.4:1888691-1888710 | None:intergenic | 25.0% |
| !!! | GGTGTACAATACTATTTTTA+GGG | - | chr8.4:1887267-1887286 | MS.gene042258:CDS | 25.0% |
| !!! | TATTTGTTACAACTTTTGGA+AGG | + | chr8.4:1886297-1886316 | None:intergenic | 25.0% |
| !!! | TATTTTTCTCTAGAAACGTA+TGG | + | chr8.4:1887714-1887733 | None:intergenic | 25.0% |
| !!! | TGATCTTTGAAATGGAATTA+AGG | + | chr8.4:1888666-1888685 | None:intergenic | 25.0% |
| !!! | TTTAGGGTAAAGTATTTTGT+AGG | - | chr8.4:1887283-1887302 | MS.gene042258:CDS | 25.0% |
| !!! | TTTTTTGTTGACAAATCCAT+TGG | - | chr8.4:1886153-1886172 | MS.gene042258:CDS | 25.0% |
| AAAAACCAATTGACTGATGA+AGG | + | chr8.4:1888769-1888788 | None:intergenic | 30.0% | |
| AAATCATTATTCAGGTCCAA+TGG | + | chr8.4:1886172-1886191 | None:intergenic | 30.0% | |
| AACCTGATCATTTAAGAACT+TGG | + | chr8.4:1887563-1887582 | None:intergenic | 30.0% | |
| AAGTTCTTAAATGATCAGGT+TGG | - | chr8.4:1887562-1887581 | MS.gene042258:intron | 30.0% | |
| ACAAATGTGTAATCAATTGG+TGG | + | chr8.4:1888322-1888341 | None:intergenic | 30.0% | |
| AGTATATCTCAAATCACACA+TGG | + | chr8.4:1886408-1886427 | None:intergenic | 30.0% | |
| ATAACATCATATCTTCGTTC+AGG | + | chr8.4:1887191-1887210 | None:intergenic | 30.0% | |
| CAAAATTTGAGTAGCTGAAT+AGG | + | chr8.4:1888359-1888378 | None:intergenic | 30.0% | |
| CCTTTATGAAAAGTGATGTA+AGG | - | chr8.4:1887529-1887548 | MS.gene042258:intron | 30.0% | |
| CTAACTTATAGTCAACATGT+GGG | + | chr8.4:1889470-1889489 | None:intergenic | 30.0% | |
| CTGATCATACAAACAAAGAT+AGG | - | chr8.4:1888917-1888936 | MS.gene042258:intron | 30.0% | |
| GACATTAAGGGTAAGTAATT+TGG | - | chr8.4:1889125-1889144 | MS.gene042258:intron | 30.0% | |
| GCATAATAAACATGAACATG+TGG | + | chr8.4:1887852-1887871 | None:intergenic | 30.0% | |
| GCATAATATATGTAAGGTTC+AGG | - | chr8.4:1886854-1886873 | MS.gene042258:CDS | 30.0% | |
| GCGCAAAACATTATTAGTTA+AGG | - | chr8.4:1885912-1885931 | MS.gene042258:CDS | 30.0% | |
| GTAACAAAGTTATGGATATG+GGG | - | chr8.4:1889364-1889383 | MS.gene042258:intron | 30.0% | |
| GTCCAAAGGAAAAGAAAAAT+TGG | - | chr8.4:1889601-1889620 | MS.gene042258:CDS | 30.0% | |
| TAAAGGGAGATGTAAATTTC+TGG | + | chr8.4:1887515-1887534 | None:intergenic | 30.0% | |
| TAACCAAAAAGAACAAACAC+AGG | + | chr8.4:1885757-1885776 | None:intergenic | 30.0% | |
| TATTTCTCACATCATAAGAC+AGG | - | chr8.4:1889168-1889187 | MS.gene042258:intron | 30.0% | |
| TCAAACATGAAATAGATGGA+GGG | + | chr8.4:1888639-1888658 | None:intergenic | 30.0% | |
| TCAACAAAAAAAAGGTCCAA+TGG | + | chr8.4:1886144-1886163 | None:intergenic | 30.0% | |
| TCTAACTTATAGTCAACATG+TGG | + | chr8.4:1889471-1889490 | None:intergenic | 30.0% | |
| TGGACTAAACAATTGAAACT+TGG | + | chr8.4:1886388-1886407 | None:intergenic | 30.0% | |
| TTAAGGGTAAGTAATTTGGA+TGG | - | chr8.4:1889129-1889148 | MS.gene042258:intron | 30.0% | |
| TTCAAACATGAAATAGATGG+AGG | + | chr8.4:1888640-1888659 | None:intergenic | 30.0% | |
| TTTGAAAAATGCTTGGCAAA+CGG | + | chr8.4:1886683-1886702 | None:intergenic | 30.0% | |
| ! | AACACACATGATTTTGTCAA+GGG | + | chr8.4:1888464-1888483 | None:intergenic | 30.0% |
| ! | AGTATTTTTCATCAGGATGT+AGG | + | chr8.4:1888744-1888763 | None:intergenic | 30.0% |
| ! | ATAATGTTTTGCGCTTTCAT+TGG | + | chr8.4:1885906-1885925 | None:intergenic | 30.0% |
| ! | ATTAGGCATGATCTTTGAAA+TGG | + | chr8.4:1888674-1888693 | None:intergenic | 30.0% |
| ! | ATTCCTGTGTTTGTTCTTTT+TGG | - | chr8.4:1885751-1885770 | MS.gene042258:CDS | 30.0% |
| ! | CATTTTTGACAAACAACCAT+TGG | - | chr8.4:1886125-1886144 | MS.gene042258:CDS | 30.0% |
| ! | GAAGGTAAGTATTTTTCATC+AGG | + | chr8.4:1888751-1888770 | None:intergenic | 30.0% |
| ! | GTTGAACTTTTATAGGACAT+GGG | - | chr8.4:1889443-1889462 | MS.gene042258:intron | 30.0% |
| ! | TAACACACATGATTTTGTCA+AGG | + | chr8.4:1888465-1888484 | None:intergenic | 30.0% |
| ! | TTAGTACCATTTTGTGCTAT+TGG | + | chr8.4:1888841-1888860 | None:intergenic | 30.0% |
| ! | TTGAACTTTTATAGGACATG+GGG | - | chr8.4:1889444-1889463 | MS.gene042258:intron | 30.0% |
| !! | CCTTACATCACTTTTCATAA+AGG | + | chr8.4:1887532-1887551 | None:intergenic | 30.0% |
| !! | TAGTTTGCTTAATGCTTCAT+TGG | - | chr8.4:1885726-1885745 | MS.gene042258:CDS | 30.0% |
| !!! | ATCAAATGATGGATACCTTT+TGG | + | chr8.4:1887963-1887982 | None:intergenic | 30.0% |
| !!! | ATTTTGGAATTCAAGTTGAG+AGG | + | chr8.4:1889208-1889227 | None:intergenic | 30.0% |
| AAAGAAATGTTGCAAGAGGA+AGG | - | chr8.4:1889570-1889589 | MS.gene042258:CDS | 35.0% | |
| AAATTTCGCATTTCTCTGTG+AGG | + | chr8.4:1888495-1888514 | None:intergenic | 35.0% | |
| AACAAAGATAGGGTCAAACA+AGG | - | chr8.4:1888928-1888947 | MS.gene042258:intron | 35.0% | |
| AAGCTTGAATACGGTATCAA+TGG | + | chr8.4:1887919-1887938 | None:intergenic | 35.0% | |
| ACAAGAACATACCCAAAAAG+AGG | + | chr8.4:1888256-1888275 | None:intergenic | 35.0% | |
| ACCAAAAGAAATGTTGCAAG+AGG | - | chr8.4:1889566-1889585 | MS.gene042258:CDS | 35.0% | |
| ACCATTGAATTGCAACATAC+AGG | - | chr8.4:1888046-1888065 | MS.gene042258:intron | 35.0% | |
| ACCTGTATGTTGCAATTCAA+TGG | + | chr8.4:1888050-1888069 | None:intergenic | 35.0% | |
| ACTGGTAGCCAAATATACAA+AGG | + | chr8.4:1888382-1888401 | None:intergenic | 35.0% | |
| ACTTACCTTCATCAGTCAAT+TGG | - | chr8.4:1888761-1888780 | MS.gene042258:intron | 35.0% | |
| AGAAAATACAGTGCCGTAAT+TGG | + | chr8.4:1886562-1886581 | None:intergenic | 35.0% | |
| AGCTTGAATACGGTATCAAT+GGG | + | chr8.4:1887918-1887937 | None:intergenic | 35.0% | |
| ATACTATATCCCACCTAATG+AGG | - | chr8.4:1886423-1886442 | MS.gene042258:CDS | 35.0% | |
| ATTAGGGGAATTTCCTCATT+AGG | + | chr8.4:1886439-1886458 | None:intergenic | 35.0% | |
| ATTTCTGCATGAAATCCCTA+CGG | + | chr8.4:1886732-1886751 | None:intergenic | 35.0% | |
| CTACTAGGGAAAAAAGGAAT+AGG | - | chr8.4:1889318-1889337 | MS.gene042258:intron | 35.0% | |
| CTATAAAAGTTCAACCATGC+TGG | + | chr8.4:1889438-1889457 | None:intergenic | 35.0% | |
| CTTGTATAGTAATGCTCCAT+TGG | + | chr8.4:1888794-1888813 | None:intergenic | 35.0% | |
| CTTGTTCTACTAGGGAAAAA+AGG | - | chr8.4:1889312-1889331 | MS.gene042258:intron | 35.0% | |
| GAATTGCAACATACAGGTAA+TGG | - | chr8.4:1888052-1888071 | MS.gene042258:intron | 35.0% | |
| GACCTGGAAGGTTAAAAATA+GGG | - | chr8.4:1889046-1889065 | MS.gene042258:intron | 35.0% | |
| GGATATGGGGAAATATGTAT+TGG | - | chr8.4:1889377-1889396 | MS.gene042258:intron | 35.0% | |
| GTACATGTGAAACCAATGTT+TGG | - | chr8.4:1888976-1888995 | MS.gene042258:intron | 35.0% | |
| GTCATAGAAATTGAAGTCTC+CGG | + | chr8.4:1888536-1888555 | None:intergenic | 35.0% | |
| TCAACTGAAAAATTGTCCCA+CGG | + | chr8.4:1886536-1886555 | None:intergenic | 35.0% | |
| TCAGGATGTAGGTATAGAAA+TGG | + | chr8.4:1888733-1888752 | None:intergenic | 35.0% | |
| TGCCAAGTTCTTAAATGATC+AGG | - | chr8.4:1887558-1887577 | MS.gene042258:intron | 35.0% | |
| TGGCATAGAAGAAAAATACC+TGG | + | chr8.4:1885657-1885676 | None:intergenic | 35.0% | |
| TTCTGCTAGAACTACTAGTT+TGG | + | chr8.4:1887632-1887651 | None:intergenic | 35.0% | |
| ! | ACACACATGATTTTGTCAAG+GGG | + | chr8.4:1888463-1888482 | None:intergenic | 35.0% |
| ! | CAGCATGGTTGAACTTTTAT+AGG | - | chr8.4:1889436-1889455 | MS.gene042258:intron | 35.0% |
| ! | CCAACAACAAACCTCTTTTT+GGG | - | chr8.4:1888242-1888261 | MS.gene042258:intron | 35.0% |
| ! | GGAGCATTACTATACAAGAA+AGG | - | chr8.4:1888796-1888815 | MS.gene042258:intron | 35.0% |
| ! | GGTTGAACTTTTATAGGACA+TGG | - | chr8.4:1889442-1889461 | MS.gene042258:intron | 35.0% |
| ! | TAGTTAAGGTGCGTTTGTTA+AGG | - | chr8.4:1885926-1885945 | MS.gene042258:CDS | 35.0% |
| ! | TATCACCTAGTATTTTCGGA+CGG | + | chr8.4:1887348-1887367 | None:intergenic | 35.0% |
| ! | TCCTCTTGCAACATTTCTTT+TGG | + | chr8.4:1889570-1889589 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGTATGATCAGC+TGG | + | chr8.4:1888916-1888935 | None:intergenic | 35.0% |
| ! | TGAACAACAGGTCTTTTTGT+TGG | + | chr8.4:1889252-1889271 | None:intergenic | 35.0% |
| ! | TGGACTTTTTACCCTTTCAA+TGG | - | chr8.4:1889024-1889043 | MS.gene042258:intron | 35.0% |
| ! | TTTTCCACTTGGTTACAACT+AGG | + | chr8.4:1886492-1886511 | None:intergenic | 35.0% |
| !! | CCAAAAAGAGGTTTGTTGTT+GGG | + | chr8.4:1888244-1888263 | None:intergenic | 35.0% |
| !! | CGAAATTTCTTCGTCGATTT+GGG | - | chr8.4:1888507-1888526 | MS.gene042258:intron | 35.0% |
| !!! | AACCCTATTTTTAACCTTCC+AGG | + | chr8.4:1889051-1889070 | None:intergenic | 35.0% |
| !!! | AACTTTTTTTTTGTGGTGGC+CGG | + | chr8.4:1886889-1886908 | None:intergenic | 35.0% |
| !!! | CTTTTTTCCCTAGTAGAACA+AGG | + | chr8.4:1889314-1889333 | None:intergenic | 35.0% |
| !!! | GTCAATTGGTTTTTCTCCAA+TGG | - | chr8.4:1888775-1888794 | MS.gene042258:intron | 35.0% |
| !!! | TCTTTTTGGGTATGTTCTTG+TGG | - | chr8.4:1888255-1888274 | MS.gene042258:intron | 35.0% |
| AAAATTTGGGGAGCCATTGA+TGG | - | chr8.4:1888136-1888155 | MS.gene042258:intron | 40.0% | |
| AAATGGTACTAACCTTCCTC+AGG | - | chr8.4:1888849-1888868 | MS.gene042258:intron | 40.0% | |
| AATGGTACTAACCTTCCTCA+GGG | - | chr8.4:1888850-1888869 | MS.gene042258:intron | 40.0% | |
| ACGTTGATACTGTAGACACT+TGG | + | chr8.4:1888111-1888130 | None:intergenic | 40.0% | |
| AGTATCTTGTGTGCACAACA+GGG | + | chr8.4:1887431-1887450 | None:intergenic | 40.0% | |
| ATCACCTAGTTGTAACCAAG+TGG | - | chr8.4:1886485-1886504 | MS.gene042258:CDS | 40.0% | |
| ATGAGGAAATTCCCCTAATG+AGG | - | chr8.4:1886440-1886459 | MS.gene042258:CDS | 40.0% | |
| CACATCATAAGACAGGTTCA+TGG | - | chr8.4:1889175-1889194 | MS.gene042258:intron | 40.0% | |
| CAGCATGTGGATATGTTGAA+TGG | + | chr8.4:1889290-1889309 | None:intergenic | 40.0% | |
| CATCATATCTTCGTTCAGGT+TGG | + | chr8.4:1887187-1887206 | None:intergenic | 40.0% | |
| CATGTGAAACCAATGTTTGG+AGG | - | chr8.4:1888979-1888998 | MS.gene042258:intron | 40.0% | |
| CATTCAACATATCCACATGC+TGG | - | chr8.4:1889288-1889307 | MS.gene042258:intron | 40.0% | |
| CCACATTGCAAAATCAGTGA+AGG | + | chr8.4:1889007-1889026 | None:intergenic | 40.0% | |
| CCTAACATAGAGAATCCTTG+AGG | + | chr8.4:1888208-1888227 | None:intergenic | 40.0% | |
| CCTAGACCAATAGCACAAAA+TGG | - | chr8.4:1888832-1888851 | MS.gene042258:intron | 40.0% | |
| CCTCAAGGATTCTCTATGTT+AGG | - | chr8.4:1888205-1888224 | MS.gene042258:intron | 40.0% | |
| GACGTTAGACCAATAAGTAG+AGG | - | chr8.4:1888553-1888572 | MS.gene042258:intron | 40.0% | |
| GAGAGAATAGGTGAACATGT+TGG | - | chr8.4:1889087-1889106 | MS.gene042258:intron | 40.0% | |
| GCTTGAATACGGTATCAATG+GGG | + | chr8.4:1887917-1887936 | None:intergenic | 40.0% | |
| GCTTGAGTTCCTCTACTTAT+TGG | + | chr8.4:1888565-1888584 | None:intergenic | 40.0% | |
| GGACCTGGAAGGTTAAAAAT+AGG | - | chr8.4:1889045-1889064 | MS.gene042258:intron | 40.0% | |
| GTAAAGTTAAAGAGCCAGCA+TGG | - | chr8.4:1889421-1889440 | MS.gene042258:intron | 40.0% | |
| GTTGTTCATGCTTCATTGCA+TGG | - | chr8.4:1889264-1889283 | MS.gene042258:intron | 40.0% | |
| TGCAATGAAGCATGAACAAC+AGG | + | chr8.4:1889264-1889283 | None:intergenic | 40.0% | |
| TGCAGTTGGAAGCTTGAATA+CGG | + | chr8.4:1887928-1887947 | None:intergenic | 40.0% | |
| TGTTTGTATGATCAGCTGGT+AGG | + | chr8.4:1888912-1888931 | None:intergenic | 40.0% | |
| TGTTTGTGTTGTGCTTCTCA+TGG | - | chr8.4:1885590-1885609 | MS.gene042258:CDS | 40.0% | |
| TTCCAACTGCAACTACTTCT+TGG | - | chr8.4:1887937-1887956 | MS.gene042258:intron | 40.0% | |
| ! | AATCCTTGAGGTATTCCTGT+TGG | + | chr8.4:1888196-1888215 | None:intergenic | 40.0% |
| ! | ATCACCTAGTATTTTCGGAC+GGG | + | chr8.4:1887347-1887366 | None:intergenic | 40.0% |
| ! | CCCAACAACAAACCTCTTTT+TGG | - | chr8.4:1888241-1888260 | MS.gene042258:intron | 40.0% |
| ! | GCGAAATTTCTTCGTCGATT+TGG | - | chr8.4:1888506-1888525 | MS.gene042258:intron | 40.0% |
| ! | GGCACTTTTGTTGCACAAAA+TGG | - | chr8.4:1888601-1888620 | MS.gene042258:intron | 40.0% |
| ! | GGTTTCTGCAGAGTATTTGA+GGG | - | chr8.4:1889398-1889417 | MS.gene042258:intron | 40.0% |
| ! | GTTTCTGCAGAGTATTTGAG+GGG | - | chr8.4:1889399-1889418 | MS.gene042258:intron | 40.0% |
| ! | TGGTTTCTGCAGAGTATTTG+AGG | - | chr8.4:1889397-1889416 | MS.gene042258:intron | 40.0% |
| ! | TTCTTTTCCTTTGGACCTGT+TGG | + | chr8.4:1889597-1889616 | None:intergenic | 40.0% |
| ! | TTTTACCCTTTCAATGGACC+TGG | - | chr8.4:1889030-1889049 | MS.gene042258:intron | 40.0% |
| !! | AAAAGCACTCAGCCTCATTA+GGG | + | chr8.4:1886455-1886474 | None:intergenic | 40.0% |
| !! | AAAGAGGTTTGTTGTTGGGT+TGG | + | chr8.4:1888240-1888259 | None:intergenic | 40.0% |
| !! | CCATTTTGTGCTATTGGTCT+AGG | + | chr8.4:1888835-1888854 | None:intergenic | 40.0% |
| !! | CCCAAAAAGAGGTTTGTTGT+TGG | + | chr8.4:1888245-1888264 | None:intergenic | 40.0% |
| !! | TAAAAGCACTCAGCCTCATT+AGG | + | chr8.4:1886456-1886475 | None:intergenic | 40.0% |
| !! | TGGCTTTAATGTGCTCTTTG+TGG | + | chr8.4:1888302-1888321 | None:intergenic | 40.0% |
| !!! | ACTTTTTTTTTGTGGTGGCC+GGG | + | chr8.4:1886888-1886907 | None:intergenic | 40.0% |
| !!! | AGTTGGGGTTTTTTTCCACT+TGG | + | chr8.4:1886503-1886522 | None:intergenic | 40.0% |
| !!! | CCTTCACTGATTTTGCAATG+TGG | - | chr8.4:1889004-1889023 | MS.gene042258:intron | 40.0% |
| AAACGGTCACACAACATTGC+CGG | + | chr8.4:1886666-1886685 | None:intergenic | 45.0% | |
| AACCTTCCAGGTCCATTGAA+AGG | + | chr8.4:1889039-1889058 | None:intergenic | 45.0% | |
| ACCTTCCAGGTCCATTGAAA+GGG | + | chr8.4:1889038-1889057 | None:intergenic | 45.0% | |
| ACTGAGGCTCCTTTATCATC+CGG | + | chr8.4:1888166-1888185 | None:intergenic | 45.0% | |
| AGCTGGTAGGTCTATCCAAT+AGG | + | chr8.4:1888899-1888918 | None:intergenic | 45.0% | |
| AGGGGAATTTCCTCATTAGG+TGG | + | chr8.4:1886436-1886455 | None:intergenic | 45.0% | |
| CAATTCTCTCTCTCACCGTA+GGG | - | chr8.4:1886714-1886733 | MS.gene042258:CDS | 45.0% | |
| CTACGGTGAGAGAGAGAATT+GGG | + | chr8.4:1886715-1886734 | None:intergenic | 45.0% | |
| GAACCAACAGGAATACCTCA+AGG | - | chr8.4:1888190-1888209 | MS.gene042258:intron | 45.0% | |
| GAGTATCTTGTGTGCACAAC+AGG | + | chr8.4:1887432-1887451 | None:intergenic | 45.0% | |
| GCAACTACTTCTTGGCCAAA+AGG | - | chr8.4:1887945-1887964 | MS.gene042258:intron | 45.0% | |
| GCACAAATGGGTCAAATTCC+AGG | - | chr8.4:1885636-1885655 | MS.gene042258:CDS | 45.0% | |
| GGGGAATTTCCTCATTAGGT+GGG | + | chr8.4:1886435-1886454 | None:intergenic | 45.0% | |
| GTGAAGGTTCCTCCAAACAT+TGG | + | chr8.4:1888991-1889010 | None:intergenic | 45.0% | |
| TACGGTGAGAGAGAGAATTG+GGG | + | chr8.4:1886714-1886733 | None:intergenic | 45.0% | |
| TGAAAAATTGTCCCACGGCT+TGG | + | chr8.4:1886531-1886550 | None:intergenic | 45.0% | |
| TGAATACGGTATCAATGGGG+CGG | + | chr8.4:1887914-1887933 | None:intergenic | 45.0% | |
| TGTTGTGCTTCTCATGGCAA+TGG | - | chr8.4:1885596-1885615 | MS.gene042258:CDS | 45.0% | |
| ! | AAAGCACTCAGCCTCATTAG+GGG | + | chr8.4:1886454-1886473 | None:intergenic | 45.0% |
| ! | ACTGGGAGCATGTGACATTA+AGG | - | chr8.4:1889112-1889131 | MS.gene042258:intron | 45.0% |
| ! | CACATGATTTTGTCAAGGGG+AGG | + | chr8.4:1888460-1888479 | None:intergenic | 45.0% |
| ! | CTGGGAGCATGTGACATTAA+GGG | - | chr8.4:1889113-1889132 | MS.gene042258:intron | 45.0% |
| ! | TGTTTAGGATTAGGACCCTG+AGG | + | chr8.4:1888868-1888887 | None:intergenic | 45.0% |
| !! | AGGTGAACATGTTGGTGACT+GGG | - | chr8.4:1889095-1889114 | MS.gene042258:intron | 45.0% |
| !! | ATGCTGGCCTTGTTCTACTA+GGG | - | chr8.4:1889304-1889323 | MS.gene042258:intron | 45.0% |
| !! | TAGGTGAACATGTTGGTGAC+TGG | - | chr8.4:1889094-1889113 | MS.gene042258:intron | 45.0% |
| !! | TCTTCGTCGATTTGGGAATC+CGG | - | chr8.4:1888514-1888533 | MS.gene042258:intron | 45.0% |
| !!! | CTCGTGTTTTAGTGACGACA+TGG | + | chr8.4:1888432-1888451 | None:intergenic | 45.0% |
| !!! | CTTTTTTTTTGTGGTGGCCG+GGG | + | chr8.4:1886887-1886906 | None:intergenic | 45.0% |
| !!! | TATTATCATTTTAAATATTA+AGG | - | chr8.4:1887152-1887171 | MS.gene042258:intron | 5.0% |
| AACGGTCACACAACATTGCC+GGG | + | chr8.4:1886665-1886684 | None:intergenic | 50.0% | |
| AAGGTTCAGGGTTCAAACCC+CGG | - | chr8.4:1886867-1886886 | MS.gene042258:CDS | 50.0% | |
| ACCCTTTCAATGGACCTGGA+AGG | - | chr8.4:1889034-1889053 | MS.gene042258:intron | 50.0% | |
| ACGGTGAGAGAGAGAATTGG+GGG | + | chr8.4:1886713-1886732 | None:intergenic | 50.0% | |
| AGTAGAACAAGGCCAGCATG+TGG | + | chr8.4:1889303-1889322 | None:intergenic | 50.0% | |
| AGTAGAGGAACTCAAGCTCG+AGG | - | chr8.4:1888568-1888587 | MS.gene042258:intron | 50.0% | |
| ATCATCCGGTCCACCATCAA+TGG | + | chr8.4:1888152-1888171 | None:intergenic | 50.0% | |
| ATTTGGGGAGCCATTGATGG+TGG | - | chr8.4:1888139-1888158 | MS.gene042258:intron | 50.0% | |
| CAATAGGCGCGGTCATGTTT+AGG | + | chr8.4:1888883-1888902 | None:intergenic | 50.0% | |
| CAGACCCGTCCGAAAATACT+AGG | - | chr8.4:1887340-1887359 | MS.gene042258:intron | 50.0% | |
| CCAAATGGCTACCGTGCTTT+AGG | - | chr8.4:1888406-1888425 | MS.gene042258:intron | 50.0% | |
| CCAACTTAGATCCAAGCCGT+GGG | - | chr8.4:1886517-1886536 | MS.gene042258:CDS | 50.0% | |
| CCAATTCTCTCTCTCACCGT+AGG | - | chr8.4:1886713-1886732 | MS.gene042258:CDS | 50.0% | |
| CCTAAAGCACGGTAGCCATT+TGG | + | chr8.4:1888409-1888428 | None:intergenic | 50.0% | |
| CCTACGGTGAGAGAGAGAAT+TGG | + | chr8.4:1886716-1886735 | None:intergenic | 50.0% | |
| CCTAGAGCAGCTGCACAAAT+GGG | - | chr8.4:1885624-1885643 | MS.gene042258:CDS | 50.0% | |
| CTAAACATGACCGCGCCTAT+TGG | - | chr8.4:1888881-1888900 | MS.gene042258:intron | 50.0% | |
| GAATACGGTATCAATGGGGC+GGG | + | chr8.4:1887913-1887932 | None:intergenic | 50.0% | |
| GGCCAAGAAGTAGTTGCAGT+TGG | + | chr8.4:1887942-1887961 | None:intergenic | 50.0% | |
| GTAGGTCTATCCAATAGGCG+CGG | + | chr8.4:1888894-1888913 | None:intergenic | 50.0% | |
| TAGGATTAGGACCCTGAGGA+AGG | + | chr8.4:1888864-1888883 | None:intergenic | 50.0% | |
| TCCTAGAGCAGCTGCACAAA+TGG | - | chr8.4:1885623-1885642 | MS.gene042258:CDS | 50.0% | |
| TGACGACATGGCCTAAAGCA+CGG | + | chr8.4:1888420-1888439 | None:intergenic | 50.0% | |
| TGGCTACCAGTAGCTCCAAA+TGG | - | chr8.4:1888391-1888410 | MS.gene042258:intron | 50.0% | |
| TTGCAAGAGGAAGGACCAAC+AGG | - | chr8.4:1889579-1889598 | MS.gene042258:CDS | 50.0% | |
| ! | ACAGGTAATGGTTTCGCGAG+AGG | - | chr8.4:1888064-1888083 | MS.gene042258:intron | 50.0% |
| ! | CAAGCTCGAGGCATTCATGT+AGG | - | chr8.4:1888580-1888599 | MS.gene042258:intron | 50.0% |
| ! | CACGGCTTGGATCTAAGTTG+GGG | + | chr8.4:1886518-1886537 | None:intergenic | 50.0% |
| ! | CCACGGCTTGGATCTAAGTT+GGG | + | chr8.4:1886519-1886538 | None:intergenic | 50.0% |
| ! | GCGCGGTCATGTTTAGGATT+AGG | + | chr8.4:1888877-1888896 | None:intergenic | 50.0% |
| !! | CATGCTGGCCTTGTTCTACT+AGG | - | chr8.4:1889303-1889322 | MS.gene042258:intron | 50.0% |
| !! | GATGGTGGACCGGATGATAA+AGG | - | chr8.4:1888154-1888173 | MS.gene042258:intron | 50.0% |
| !! | TCCTGTTGGTTCGAACACTG+AGG | + | chr8.4:1888182-1888201 | None:intergenic | 50.0% |
| AGAGGAGTCCTCGATCTAGG+TGG | - | chr8.4:1888082-1888101 | MS.gene042258:intron | 55.0% | |
| CCCAACTTAGATCCAAGCCG+TGG | - | chr8.4:1886516-1886535 | MS.gene042258:CDS | 55.0% | |
| CCCATTTGTGCAGCTGCTCT+AGG | + | chr8.4:1885627-1885646 | None:intergenic | 55.0% | |
| GAGGAGTCCTCGATCTAGGT+GGG | - | chr8.4:1888083-1888102 | MS.gene042258:intron | 55.0% | |
| GCCTCAGTGTTCGAACCAAC+AGG | - | chr8.4:1888178-1888197 | MS.gene042258:intron | 55.0% | |
| GGAAGGACCAACAGGTCCAA+AGG | - | chr8.4:1889587-1889606 | MS.gene042258:CDS | 55.0% | |
| ! | CCCACGGCTTGGATCTAAGT+TGG | + | chr8.4:1886520-1886539 | None:intergenic | 55.0% |
| ! | CGGTAGCCATTTGGAGCTAC+TGG | + | chr8.4:1888400-1888419 | None:intergenic | 55.0% |
| CTTGGAGCCCACCTAGATCG+AGG | + | chr8.4:1888093-1888112 | None:intergenic | 60.0% | |
| GCGAGAGGAGTCCTCGATCT+AGG | - | chr8.4:1888079-1888098 | MS.gene042258:intron | 60.0% | |
| !! | GGGAGCCATTGATGGTGGAC+CGG | - | chr8.4:1888144-1888163 | MS.gene042258:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 1885564 | 1889641 | 1885564 | ID=MS.gene042258 |
| chr8.4 | mRNA | 1885564 | 1889641 | 1885564 | ID=MS.gene042258.t1;Parent=MS.gene042258 |
| chr8.4 | exon | 1889548 | 1889641 | 1889548 | ID=MS.gene042258.t1.exon1;Parent=MS.gene042258.t1 |
| chr8.4 | CDS | 1889548 | 1889641 | 1889548 | ID=cds.MS.gene042258.t1;Parent=MS.gene042258.t1 |
| chr8.4 | exon | 1887239 | 1887331 | 1887239 | ID=MS.gene042258.t1.exon2;Parent=MS.gene042258.t1 |
| chr8.4 | CDS | 1887239 | 1887331 | 1887239 | ID=cds.MS.gene042258.t1;Parent=MS.gene042258.t1 |
| chr8.4 | exon | 1885564 | 1887137 | 1885564 | ID=MS.gene042258.t1.exon3;Parent=MS.gene042258.t1 |
| chr8.4 | CDS | 1885564 | 1887137 | 1885564 | ID=cds.MS.gene042258.t1;Parent=MS.gene042258.t1 |
| Gene Sequence |
| Protein sequence |
