Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52609.t1 | XP_003590981.1 | 97.9 | 560 | 12 | 0 | 1 | 560 | 1 | 560 | 2.90E-303 | 1050.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52609.t1 | G7I6T7 | 97.9 | 560 | 12 | 0 | 1 | 560 | 1 | 560 | 2.1e-303 | 1050.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene52609 | 0.801269 | 9.75E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene52609 | 0.824832 | 6.52E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene52609 | 0.822608 | 2.16E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene52609 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene52609 | 0.818867 | 1.57E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene52609 | 0.815331 | 9.77E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene52609 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene051209 | MS.gene52609 | 0.824032 | 1.01E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene52609 | 0.812197 | 4.78E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene52609 | 0.810593 | 1.07E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene52609 | 0.813801 | 2.13E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene52609 | 0.813347 | 2.68E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene52609 | -0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene52609 | 0.822129 | 2.79E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene52609 | 0.802075 | 6.66E-49 | -1.69E-46 |
| MS.gene05454 | MS.gene52609 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene054892 | MS.gene52609 | 0.823531 | 1.32E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene52609 | 0.825867 | 3.71E-54 | -1.69E-46 |
| MS.gene055724 | MS.gene52609 | 0.814217 | 1.72E-51 | -1.69E-46 |
| MS.gene056363 | MS.gene52609 | 0.838161 | 3.39E-57 | -1.69E-46 |
| MS.gene056444 | MS.gene52609 | 0.802139 | 6.47E-49 | -1.69E-46 |
| MS.gene056519 | MS.gene52609 | 0.82943 | 5.17E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene52609 | 0.8034 | 3.55E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene52609 | 0.88936 | 2.60E-73 | -1.69E-46 |
| MS.gene056973 | MS.gene52609 | 0.832852 | 7.46E-56 | -1.69E-46 |
| MS.gene057174 | MS.gene52609 | 0.845313 | 4.39E-59 | -1.69E-46 |
| MS.gene057208 | MS.gene52609 | 0.815557 | 8.70E-52 | -1.69E-46 |
| MS.gene058010 | MS.gene52609 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene52609 | 0.838153 | 3.40E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene52609 | 0.809793 | 1.59E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene52609 | 0.816154 | 6.40E-52 | -1.69E-46 |
| MS.gene059634 | MS.gene52609 | 0.833483 | 5.20E-56 | -1.69E-46 |
| MS.gene05985 | MS.gene52609 | -0.809578 | 1.77E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene52609 | 0.828633 | 8.07E-55 | -1.69E-46 |
| MS.gene060785 | MS.gene52609 | 0.807312 | 5.38E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene52609 | 0.843083 | 1.74E-58 | -1.69E-46 |
| MS.gene060935 | MS.gene52609 | 0.834444 | 2.99E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene52609 | 0.84489 | 5.71E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60884 | MS.gene52609 | PPI |
| MS.gene33537 | MS.gene52609 | PPI |
| MS.gene52609 | MS.gene043859 | PPI |
| MS.gene60883 | MS.gene52609 | PPI |
| MS.gene042258 | MS.gene52609 | PPI |
| MS.gene52609 | MS.gene60881 | PPI |
| MS.gene52609 | MS.gene000193 | PPI |
| MS.gene52609 | MS.gene000192 | PPI |
| MS.gene061203 | MS.gene52609 | PPI |
| MS.gene52609 | MS.gene60889 | PPI |
| MS.gene60886 | MS.gene52609 | PPI |
| MS.gene52609 | MS.gene60887 | PPI |
| MS.gene52609 | MS.gene000190 | PPI |
| MS.gene000191 | MS.gene52609 | PPI |
| MS.gene012606 | MS.gene52609 | PPI |
| MS.gene52609 | MS.gene60888 | PPI |
| MS.gene043858 | MS.gene52609 | PPI |
| MS.gene52609 | MS.gene042257 | PPI |
| MS.gene043855 | MS.gene52609 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52609.t1 | MTR_1g080370 | 97.857 | 560 | 12 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1140 |
| MS.gene52609.t1 | MTR_1g080410 | 97.857 | 560 | 12 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1140 |
| MS.gene52609.t1 | MTR_5g007860 | 56.140 | 570 | 233 | 7 | 4 | 558 | 38 | 605 | 0.0 | 659 |
| MS.gene52609.t1 | MTR_4g077620 | 55.009 | 569 | 241 | 8 | 1 | 558 | 3 | 567 | 0.0 | 654 |
| MS.gene52609.t1 | MTR_2g062430 | 46.903 | 565 | 268 | 12 | 6 | 558 | 8 | 552 | 2.69e-173 | 502 |
| MS.gene52609.t1 | MTR_2g067640 | 45.652 | 552 | 263 | 10 | 20 | 558 | 13 | 540 | 3.68e-170 | 493 |
| MS.gene52609.t1 | MTR_2g062410 | 46.422 | 545 | 267 | 9 | 23 | 558 | 57 | 585 | 3.70e-167 | 487 |
| MS.gene52609.t1 | MTR_2g062370 | 44.991 | 549 | 273 | 9 | 23 | 558 | 57 | 589 | 2.36e-160 | 470 |
| MS.gene52609.t1 | MTR_4g131710 | 44.646 | 551 | 274 | 10 | 23 | 558 | 51 | 585 | 7.88e-160 | 469 |
| MS.gene52609.t1 | MTR_2g062380 | 45.996 | 537 | 260 | 9 | 35 | 558 | 40 | 559 | 4.14e-154 | 453 |
| MS.gene52609.t1 | MTR_2g062340 | 44.505 | 546 | 244 | 9 | 23 | 558 | 20 | 516 | 3.90e-151 | 444 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52609.t1 | AT3G04350 | 64.336 | 572 | 187 | 7 | 1 | 560 | 1 | 567 | 0.0 | 761 |
| MS.gene52609.t1 | AT5G18490 | 63.298 | 564 | 187 | 8 | 4 | 560 | 3 | 553 | 0.0 | 736 |
| MS.gene52609.t1 | AT3G04350 | 65.047 | 535 | 173 | 6 | 35 | 560 | 16 | 545 | 0.0 | 722 |
| MS.gene52609.t1 | AT1G04090 | 53.726 | 577 | 245 | 9 | 1 | 560 | 1 | 572 | 0.0 | 648 |
| MS.gene52609.t1 | AT5G43950 | 53.578 | 573 | 242 | 9 | 1 | 558 | 1 | 564 | 0.0 | 632 |
| MS.gene52609.t1 | AT2G44260 | 45.588 | 544 | 268 | 9 | 23 | 558 | 29 | 552 | 4.63e-167 | 486 |
| MS.gene52609.t1 | AT2G44230 | 45.338 | 547 | 263 | 10 | 23 | 558 | 20 | 541 | 5.66e-167 | 485 |
| MS.gene52609.t1 | AT2G44260 | 45.489 | 532 | 262 | 9 | 35 | 558 | 71 | 582 | 1.40e-161 | 473 |
| MS.gene52609.t1 | AT3G01870 | 40.998 | 561 | 291 | 13 | 15 | 558 | 46 | 583 | 6.20e-138 | 412 |
| MS.gene52609.t1 | AT3G01880 | 41.636 | 550 | 285 | 13 | 23 | 558 | 62 | 589 | 2.35e-136 | 409 |
Find 138 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCATCAATGACACTTTA+AGG | 0.107306 | 1.4:-65339147 | None:intergenic |
| CATGCTCTTATTGAGCATTA+TGG | 0.140530 | 1.4:+65338806 | MS.gene52609:CDS |
| TAAACAAGTTTGAGAAAGTT+TGG | 0.235719 | 1.4:+65338198 | MS.gene52609:CDS |
| CTGAGCACAGTGGAGGTAAA+TGG | 0.247800 | 1.4:+65339266 | MS.gene52609:CDS |
| TTATTTCCAACAGAGCTTTC+TGG | 0.254169 | 1.4:+65339640 | MS.gene52609:CDS |
| ATTCGATTTGGAGTTTATTA+AGG | 0.263278 | 1.4:+65339297 | MS.gene52609:CDS |
| CACTTAATTACTCATTAATA+TGG | 0.264581 | 1.4:+65338420 | MS.gene52609:CDS |
| GGATCAGCGTCAAAGAATTC+TGG | 0.283321 | 1.4:-65337641 | None:intergenic |
| AGCCAATTGTCCTTCTCCTT+TGG | 0.307063 | 1.4:-65339682 | None:intergenic |
| GCGAACTCCTATTCCAAGTT+TGG | 0.314359 | 1.4:-65339398 | None:intergenic |
| TGTCTTGATGAATAAACTAT+TGG | 0.322222 | 1.4:-65339328 | None:intergenic |
| ATGCTCTTATTGAGCATTAT+GGG | 0.323477 | 1.4:+65338807 | MS.gene52609:CDS |
| ACAGAAAACCTAACAAATAT+TGG | 0.329471 | 1.4:-65339601 | None:intergenic |
| GATATAATGATGGTGCGTTT+TGG | 0.329648 | 1.4:+65338972 | MS.gene52609:CDS |
| CATCGAACTTCTTCAACTTT+CGG | 0.340671 | 1.4:-65338542 | None:intergenic |
| TCTTCAACTTTCGGTTCATC+TGG | 0.342527 | 1.4:-65338533 | None:intergenic |
| ATGGGTTAATGCATTCGATT+TGG | 0.345620 | 1.4:+65339285 | MS.gene52609:CDS |
| ATGATGAATGTGTTTACTTT+TGG | 0.348745 | 1.4:+65338456 | MS.gene52609:CDS |
| TCCTTCTCCTTTGGACCAGT+TGG | 0.349557 | 1.4:-65339673 | None:intergenic |
| ACATGCTTCCAATATTTGTT+AGG | 0.353415 | 1.4:+65339593 | MS.gene52609:CDS |
| AATGACACTTTAAGGGTTGC+AGG | 0.360391 | 1.4:-65339139 | None:intergenic |
| GTTCATCAATGACACTTTAA+GGG | 0.377575 | 1.4:-65339146 | None:intergenic |
| TCTGGTGAGGAGGGGCCAAC+TGG | 0.379305 | 1.4:+65339658 | MS.gene52609:CDS |
| AACTTTCGGTTCATCTGGAT+TGG | 0.384698 | 1.4:-65338528 | None:intergenic |
| TTACTCATTAATATGGTGTA+TGG | 0.386638 | 1.4:+65338427 | MS.gene52609:CDS |
| CTGTTGGAAATAATTCAAAA+AGG | 0.390774 | 1.4:-65339630 | None:intergenic |
| GTGGTTTGGTAAGGGATGTT+TGG | 0.395720 | 1.4:+65337590 | None:intergenic |
| AGAGGTGAAGGAAGAGAAAA+GGG | 0.395917 | 1.4:-65337668 | None:intergenic |
| AAGAGGTGAAGGAAGAGAAA+AGG | 0.400057 | 1.4:-65337669 | None:intergenic |
| TCATGCAGGGACTTACCTTC+AGG | 0.415789 | 1.4:+65339369 | MS.gene52609:CDS |
| CCGACAGCTTTATAACCCTT+TGG | 0.416316 | 1.4:-65338491 | None:intergenic |
| ATTATTTCTCGCATCTTCAT+TGG | 0.421196 | 1.4:-65339008 | None:intergenic |
| CATATTAATGAGTAATTAAG+TGG | 0.423515 | 1.4:-65338419 | None:intergenic |
| AGGGTTGCAGGTCCATTGAA+TGG | 0.426014 | 1.4:-65339127 | None:intergenic |
| TCCTCGCAACGGCTGATCAT+TGG | 0.426252 | 1.4:-65338318 | None:intergenic |
| GTTCATGTAAAACCAGCATT+AGG | 0.426763 | 1.4:+65339067 | MS.gene52609:CDS |
| GCTCAATAAGAGCATGAATC+TGG | 0.427486 | 1.4:-65338799 | None:intergenic |
| CTTCAGGGATCATCCAAACT+TGG | 0.432488 | 1.4:+65339385 | MS.gene52609:CDS |
| CGGTGAACATGTCGGTGATT+GGG | 0.432674 | 1.4:+65339186 | MS.gene52609:CDS |
| TCGGTGAACATGTCGGTGAT+TGG | 0.434338 | 1.4:+65339185 | MS.gene52609:CDS |
| GCAACTTCACCGGAGAGCTT+TGG | 0.443367 | 1.4:+65339230 | MS.gene52609:CDS |
| TTATAACCCTTTGGAGGGTT+AGG | 0.448233 | 1.4:-65338482 | None:intergenic |
| GGATCATCCAAACTTGGAAT+AGG | 0.450282 | 1.4:+65339391 | MS.gene52609:CDS |
| GATGGCATGTATTTCTCATC+AGG | 0.457793 | 1.4:-65338848 | None:intergenic |
| CCCAAGTGATATTCTTCCAC+CGG | 0.460813 | 1.4:-65338156 | None:intergenic |
| TCCTCACCAGAAAGCTCTGT+TGG | 0.461764 | 1.4:-65339646 | None:intergenic |
| GCATGAATCTGGTTGAGATT+CGG | 0.468325 | 1.4:-65338788 | None:intergenic |
| AATACACAACCTTGCGATAG+AGG | 0.468770 | 1.4:+65338650 | MS.gene52609:CDS |
| CCAAGACAGGAAAATCCATC+TGG | 0.469039 | 1.4:-65338281 | None:intergenic |
| GAGGACACGTTCTTGTCGCT+CGG | 0.471944 | 1.4:+65338336 | MS.gene52609:CDS |
| TGAGCACAGTGGAGGTAAAT+GGG | 0.475593 | 1.4:+65339267 | MS.gene52609:CDS |
| CTTTACTGATATTGCAATGT+GGG | 0.475927 | 1.4:+65339096 | MS.gene52609:CDS |
| GAAGGAAGAGAAAAGGGAAG+TGG | 0.478043 | 1.4:-65337662 | None:intergenic |
| TGCGAGAAATAATCATAAGA+AGG | 0.480833 | 1.4:+65339018 | MS.gene52609:CDS |
| TTTCGGTTCATCTGGATTGG+TGG | 0.487936 | 1.4:-65338525 | None:intergenic |
| ATTGTTGCTGCCGAGTATCT+TGG | 0.490221 | 1.4:+65339472 | MS.gene52609:CDS |
| GTCCAAAGGAGAAGGACAAT+TGG | 0.490950 | 1.4:+65339680 | MS.gene52609:CDS |
| GATCAGCGTCAAAGAATTCT+GGG | 0.494149 | 1.4:-65337640 | None:intergenic |
| GGGTTGCAGGTCCATTGAAT+GGG | 0.500640 | 1.4:-65339126 | None:intergenic |
| CTACTTTGATTCTGAACAAG+TGG | 0.505519 | 1.4:+65338718 | MS.gene52609:CDS |
| CTCGCAAACTTCTGTTAGAT+CGG | 0.508339 | 1.4:-65338573 | None:intergenic |
| CGGTGAAGTTGCTCACGCGA+AGG | 0.508371 | 1.4:-65339219 | None:intergenic |
| CATGCTAGCTATCCTCATGC+AGG | 0.510869 | 1.4:+65339355 | MS.gene52609:CDS |
| CCTTGTGGCCATTGTGGAAG+AGG | 0.512962 | 1.4:-65337686 | None:intergenic |
| CCACATTGCAATATCAGTAA+AGG | 0.513990 | 1.4:-65339095 | None:intergenic |
| ACAGCTTTATAACCCTTTGG+AGG | 0.522987 | 1.4:-65338488 | None:intergenic |
| TTGGTTGCCTAACCCTCCAA+AGG | 0.523651 | 1.4:+65338475 | MS.gene52609:CDS |
| CATGCAGGGACTTACCTTCA+GGG | 0.530671 | 1.4:+65339370 | MS.gene52609:CDS |
| TTTCTCGCATCTTCATTGGT+AGG | 0.535231 | 1.4:-65339004 | None:intergenic |
| AACAGAGCTTTCTGGTGAGG+AGG | 0.540070 | 1.4:+65339648 | MS.gene52609:CDS |
| GTATACTGCGGGTAATGCAA+AGG | 0.543009 | 1.4:+65338907 | MS.gene52609:CDS |
| ACAGAGCTTTCTGGTGAGGA+GGG | 0.543440 | 1.4:+65339649 | MS.gene52609:CDS |
| GCCGGTGGAAGAATATCACT+TGG | 0.543957 | 1.4:+65338155 | MS.gene52609:CDS |
| GTAAAGGCTCCTCCTAATGC+TGG | 0.544725 | 1.4:-65339079 | None:intergenic |
| AGAATACCTTGTGGCCATTG+TGG | 0.547018 | 1.4:-65337692 | None:intergenic |
| AAGAGCTGGGGATTCTGACT+CGG | 0.549133 | 1.4:-65338390 | None:intergenic |
| AGGACACGTTCTTGTCGCTC+GGG | 0.549143 | 1.4:+65338337 | MS.gene52609:CDS |
| AATTCTAACGGAAAGGCACT+AGG | 0.549895 | 1.4:+65338230 | MS.gene52609:CDS |
| AGACCTTTGGAGATTCCAGA+TGG | 0.551683 | 1.4:+65338266 | MS.gene52609:CDS |
| TTCCTTCACCTCTTCCACAA+TGG | 0.552183 | 1.4:+65337678 | MS.gene52609:CDS |
| GACTCCATCACCAAGATACT+CGG | 0.556847 | 1.4:-65339482 | None:intergenic |
| GGTGAAGTTGCTCACGCGAA+GGG | 0.560176 | 1.4:-65339218 | None:intergenic |
| CGTGAATCATATACAATGGT+AGG | 0.564534 | 1.4:-65339547 | None:intergenic |
| TCCAACAGAGCTTTCTGGTG+AGG | 0.565118 | 1.4:+65339645 | MS.gene52609:CDS |
| CAGCTTTATAACCCTTTGGA+GGG | 0.565388 | 1.4:-65338487 | None:intergenic |
| CGACAGATACACCTCTAGCT+AGG | 0.565938 | 1.4:-65338676 | None:intergenic |
| GCGAGAAATAATCATAAGAA+GGG | 0.567421 | 1.4:+65339019 | MS.gene52609:CDS |
| GACTCGGAACAATCAGCTTG+AGG | 0.567833 | 1.4:-65338374 | None:intergenic |
| TATACTGCGGGTAATGCAAA+GGG | 0.571900 | 1.4:+65338908 | MS.gene52609:CDS |
| CATGTAAAACCAGCATTAGG+AGG | 0.572269 | 1.4:+65339070 | MS.gene52609:CDS |
| AACATTGAGATGAACAAGAT+CGG | 0.572272 | 1.4:+65339166 | MS.gene52609:CDS |
| TCAGGATGAAAATATACAGT+TGG | 0.579056 | 1.4:-65338830 | None:intergenic |
| TGGAGATGCACAAATTCTAA+CGG | 0.580046 | 1.4:+65338218 | MS.gene52609:CDS |
| TGGTTGCCTAACCCTCCAAA+GGG | 0.582899 | 1.4:+65338476 | MS.gene52609:CDS |
| CTTCGCGTGAGCAACTTCAC+CGG | 0.582952 | 1.4:+65339220 | MS.gene52609:CDS |
| TCCAATGATCAGCCGTTGCG+AGG | 0.585934 | 1.4:+65338317 | MS.gene52609:CDS |
| GCCAACTGGTCCAAAGGAGA+AGG | 0.588714 | 1.4:+65339672 | MS.gene52609:CDS |
| GTGGCAGTAGTAACCAAGAC+AGG | 0.592567 | 1.4:-65338294 | None:intergenic |
| AAGGTTGTGTATTCCAAACC+TGG | 0.594362 | 1.4:-65338640 | None:intergenic |
| AATCCATCTGGAATCTCCAA+AGG | 0.594832 | 1.4:-65338269 | None:intergenic |
| ACATGCCATCATCGGTGTCG+TGG | 0.595421 | 1.4:+65338861 | MS.gene52609:CDS |
| CTCATATATTGCAACCAACA+TGG | 0.598495 | 1.4:-65339514 | None:intergenic |
| CCAAAGGGTTATAAAGCTGT+CGG | 0.598946 | 1.4:+65338491 | MS.gene52609:CDS |
| CCTCTTCCACAATGGCCACA+AGG | 0.602749 | 1.4:+65337686 | MS.gene52609:CDS |
| GGCACAAATTTACCTGGTGG+AGG | 0.603301 | 1.4:+65338950 | MS.gene52609:CDS |
| GGTTGCAATATATGAGAGAG+TGG | 0.604682 | 1.4:+65339521 | MS.gene52609:CDS |
| TGAGAAATACATGCCATCAT+CGG | 0.607689 | 1.4:+65338853 | MS.gene52609:CDS |
| TATCACGGCACAAATTTACC+TGG | 0.610377 | 1.4:+65338944 | MS.gene52609:CDS |
| AAGGAGAAGGACAATTGGCT+AGG | 0.611868 | 1.4:+65339685 | MS.gene52609:CDS |
| CTAGCTAGAGGTGTATCTGT+CGG | 0.614059 | 1.4:+65338677 | MS.gene52609:CDS |
| TAGTTTATTCATCAAGACAT+GGG | 0.614112 | 1.4:+65339332 | MS.gene52609:CDS |
| GGAGGGGCCAACTGGTCCAA+AGG | 0.615580 | 1.4:+65339666 | MS.gene52609:CDS |
| CCTGGTGGAGGATATAATGA+TGG | 0.615594 | 1.4:+65338962 | MS.gene52609:CDS |
| CAAGTTTGGATGATCCCTGA+AGG | 0.618933 | 1.4:-65339384 | None:intergenic |
| GGTAAAGCTATAGATTATCA+CGG | 0.619614 | 1.4:+65338929 | MS.gene52609:CDS |
| ATGCACAAATTCTAACGGAA+AGG | 0.619830 | 1.4:+65338223 | MS.gene52609:CDS |
| CCTTTACTGATATTGCAATG+TGG | 0.624376 | 1.4:+65339095 | MS.gene52609:CDS |
| CACGGCACAAATTTACCTGG+TGG | 0.625316 | 1.4:+65338947 | MS.gene52609:CDS |
| CCATCATTATATCCTCCACC+AGG | 0.627153 | 1.4:-65338962 | None:intergenic |
| GTTGCAATATATGAGAGAGT+GGG | 0.627285 | 1.4:+65339522 | MS.gene52609:CDS |
| GGCCATTGTGGAAGAGGTGA+AGG | 0.627997 | 1.4:-65337680 | None:intergenic |
| GCTGCCGAGTATCTTGGTGA+TGG | 0.635810 | 1.4:+65339478 | MS.gene52609:CDS |
| GAAGGGAAACATAGAGAGTG+CGG | 0.636222 | 1.4:+65339036 | MS.gene52609:CDS |
| TGAAGGTAAGTCCCTGCATG+AGG | 0.636865 | 1.4:-65339367 | None:intergenic |
| ATAGTTTATTCATCAAGACA+TGG | 0.637290 | 1.4:+65339331 | MS.gene52609:CDS |
| ACAAGAACGTGTCCTCGCAA+CGG | 0.637737 | 1.4:-65338329 | None:intergenic |
| TCTGTCGGAACATTCTTCTG+TGG | 0.649136 | 1.4:+65338692 | MS.gene52609:CDS |
| AACAAGATCGGTGAACATGT+CGG | 0.653405 | 1.4:+65339178 | MS.gene52609:CDS |
| CACTTGTTCAGAATCAAAGT+AGG | 0.653816 | 1.4:-65338717 | None:intergenic |
| AGAACGTGAATCATATACAA+TGG | 0.654517 | 1.4:-65339551 | None:intergenic |
| GCTAGGATACCTCTATCGCA+AGG | 0.655324 | 1.4:-65338659 | None:intergenic |
| ATGCTAGCTATCCTCATGCA+GGG | 0.655682 | 1.4:+65339356 | MS.gene52609:CDS |
| CAGAGCTTTCTGGTGAGGAG+GGG | 0.657357 | 1.4:+65339650 | MS.gene52609:CDS |
| CCGGTGGAAGAATATCACTT+GGG | 0.660476 | 1.4:+65338156 | MS.gene52609:CDS |
| GCAACGGCTGATCATTGGAG+TGG | 0.664542 | 1.4:-65338313 | None:intergenic |
| GAGTCATTACAGAACCATGT+TGG | 0.666649 | 1.4:+65339500 | MS.gene52609:CDS |
| TTGCAATATATGAGAGAGTG+GGG | 0.676061 | 1.4:+65339523 | MS.gene52609:CDS |
| GATAGAGGTATCCTAGCTAG+AGG | 0.677823 | 1.4:+65338665 | MS.gene52609:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATACTATTTGATTTCTTTT+TGG | + | chr1.4:65338034-65338053 | MS.gene52609:intron | 15.0% |
| !! | CACTTAATTACTCATTAATA+TGG | + | chr1.4:65338420-65338439 | MS.gene52609:CDS | 20.0% |
| !! | CATATTAATGAGTAATTAAG+TGG | - | chr1.4:65338422-65338441 | None:intergenic | 20.0% |
| !!! | ACTGTTTTCTTTCTATTTTT+TGG | + | chr1.4:65337765-65337784 | MS.gene52609:intron | 20.0% |
| !!! | GATCTTATTGTCATTAATTT+TGG | + | chr1.4:65337846-65337865 | MS.gene52609:intron | 20.0% |
| !!! | TGCTAAAAGTAATTTTATTC+TGG | + | chr1.4:65339429-65339448 | MS.gene52609:CDS | 20.0% |
| !!! | TTTGATTTCTTTTTGGTTAT+TGG | + | chr1.4:65338041-65338060 | MS.gene52609:intron | 20.0% |
| ! | AAGAAAAAAAGAATACCTTG+TGG | - | chr1.4:65337704-65337723 | None:intergenic | 25.0% |
| ! | ACAGAAAACCTAACAAATAT+TGG | - | chr1.4:65339604-65339623 | None:intergenic | 25.0% |
| ! | ATAGTTTATTCATCAAGACA+TGG | + | chr1.4:65339331-65339350 | MS.gene52609:CDS | 25.0% |
| ! | CTGTTGGAAATAATTCAAAA+AGG | - | chr1.4:65339633-65339652 | None:intergenic | 25.0% |
| ! | TAAACAAGTTTGAGAAAGTT+TGG | + | chr1.4:65338198-65338217 | MS.gene52609:CDS | 25.0% |
| ! | TAGTTTATTCATCAAGACAT+GGG | + | chr1.4:65339332-65339351 | MS.gene52609:CDS | 25.0% |
| ! | TGTCTTGATGAATAAACTAT+TGG | - | chr1.4:65339331-65339350 | None:intergenic | 25.0% |
| ! | TTACTCATTAATATGGTGTA+TGG | + | chr1.4:65338427-65338446 | MS.gene52609:CDS | 25.0% |
| !! | ATGATGAATGTGTTTACTTT+TGG | + | chr1.4:65338456-65338475 | MS.gene52609:CDS | 25.0% |
| !! | TTTTACGTTTTATAGACCTT+TGG | + | chr1.4:65338253-65338272 | MS.gene52609:CDS | 25.0% |
| !!! | AATATTTGTTAGGTTTTCTG+TGG | + | chr1.4:65339603-65339622 | MS.gene52609:CDS | 25.0% |
| !!! | ATTCGATTTGGAGTTTATTA+AGG | + | chr1.4:65339297-65339316 | MS.gene52609:CDS | 25.0% |
| !!! | GTAGTATTTTTTGCAGATAT+TGG | + | chr1.4:65337874-65337893 | MS.gene52609:intron | 25.0% |
| AACATTGAGATGAACAAGAT+CGG | + | chr1.4:65339166-65339185 | MS.gene52609:CDS | 30.0% | |
| ACATGCTTCCAATATTTGTT+AGG | + | chr1.4:65339593-65339612 | MS.gene52609:CDS | 30.0% | |
| AGAAAAATTCTTTCCAGGTT+TGG | + | chr1.4:65338627-65338646 | MS.gene52609:CDS | 30.0% | |
| AGAACGTGAATCATATACAA+TGG | - | chr1.4:65339554-65339573 | None:intergenic | 30.0% | |
| ATGCTCTTATTGAGCATTAT+GGG | + | chr1.4:65338807-65338826 | MS.gene52609:CDS | 30.0% | |
| CTTTACTGATATTGCAATGT+GGG | + | chr1.4:65339096-65339115 | MS.gene52609:CDS | 30.0% | |
| GCGAGAAATAATCATAAGAA+GGG | + | chr1.4:65339019-65339038 | MS.gene52609:CDS | 30.0% | |
| GGTAAAGCTATAGATTATCA+CGG | + | chr1.4:65338929-65338948 | MS.gene52609:CDS | 30.0% | |
| GTTCATCAATGACACTTTAA+GGG | - | chr1.4:65339149-65339168 | None:intergenic | 30.0% | |
| TCAGGATGAAAATATACAGT+TGG | - | chr1.4:65338833-65338852 | None:intergenic | 30.0% | |
| TGCGAGAAATAATCATAAGA+AGG | + | chr1.4:65339018-65339037 | MS.gene52609:CDS | 30.0% | |
| TGTTCATCAATGACACTTTA+AGG | - | chr1.4:65339150-65339169 | None:intergenic | 30.0% | |
| ! | ATTATTTCTCGCATCTTCAT+TGG | - | chr1.4:65339011-65339030 | None:intergenic | 30.0% |
| ! | CTTTATTGCATATTTTGCTG+TGG | + | chr1.4:65337959-65337978 | MS.gene52609:intron | 30.0% |
| AGTTTGTGAATGATCTACTC+AGG | + | chr1.4:65338122-65338141 | MS.gene52609:intron | 35.0% | |
| ATGCACAAATTCTAACGGAA+AGG | + | chr1.4:65338223-65338242 | MS.gene52609:CDS | 35.0% | |
| CACTTGTTCAGAATCAAAGT+AGG | - | chr1.4:65338720-65338739 | None:intergenic | 35.0% | |
| CATCGAACTTCTTCAACTTT+CGG | - | chr1.4:65338545-65338564 | None:intergenic | 35.0% | |
| CATGCTCTTATTGAGCATTA+TGG | + | chr1.4:65338806-65338825 | MS.gene52609:CDS | 35.0% | |
| CCACATTGCAATATCAGTAA+AGG | - | chr1.4:65339098-65339117 | None:intergenic | 35.0% | |
| CCTTTACTGATATTGCAATG+TGG | + | chr1.4:65339095-65339114 | MS.gene52609:CDS | 35.0% | |
| CGTGAATCATATACAATGGT+AGG | - | chr1.4:65339550-65339569 | None:intergenic | 35.0% | |
| CTACTTTGATTCTGAACAAG+TGG | + | chr1.4:65338718-65338737 | MS.gene52609:CDS | 35.0% | |
| CTCATATATTGCAACCAACA+TGG | - | chr1.4:65339517-65339536 | None:intergenic | 35.0% | |
| GTCGAAGAAAAATTCTTTCC+AGG | + | chr1.4:65338622-65338641 | MS.gene52609:CDS | 35.0% | |
| GTTCATGTAAAACCAGCATT+AGG | + | chr1.4:65339067-65339086 | MS.gene52609:CDS | 35.0% | |
| GTTGCAATATATGAGAGAGT+GGG | + | chr1.4:65339522-65339541 | MS.gene52609:CDS | 35.0% | |
| TGAGAAATACATGCCATCAT+CGG | + | chr1.4:65338853-65338872 | MS.gene52609:CDS | 35.0% | |
| TGGAGATGCACAAATTCTAA+CGG | + | chr1.4:65338218-65338237 | MS.gene52609:CDS | 35.0% | |
| TTATTTCCAACAGAGCTTTC+TGG | + | chr1.4:65339640-65339659 | MS.gene52609:CDS | 35.0% | |
| TTGCAATATATGAGAGAGTG+GGG | + | chr1.4:65339523-65339542 | MS.gene52609:CDS | 35.0% | |
| ! | ATGGGTTAATGCATTCGATT+TGG | + | chr1.4:65339285-65339304 | MS.gene52609:CDS | 35.0% |
| ! | TGGAGCAATTTTGTATACTG+CGG | + | chr1.4:65338895-65338914 | MS.gene52609:CDS | 35.0% |
| !! | GATATAATGATGGTGCGTTT+TGG | + | chr1.4:65338972-65338991 | MS.gene52609:CDS | 35.0% |
| !! | TAAGTGGCTTTTTAAGAGCT+GGG | - | chr1.4:65338406-65338425 | None:intergenic | 35.0% |
| !! | TTAAGTGGCTTTTTAAGAGC+TGG | - | chr1.4:65338407-65338426 | None:intergenic | 35.0% |
| AAAAACAGACCAAAGCTCTC+CGG | - | chr1.4:65339242-65339261 | None:intergenic | 40.0% | |
| AACAAGATCGGTGAACATGT+CGG | + | chr1.4:65339178-65339197 | MS.gene52609:CDS | 40.0% | |
| AACTTTCGGTTCATCTGGAT+TGG | - | chr1.4:65338531-65338550 | None:intergenic | 40.0% | |
| AAGAGGTGAAGGAAGAGAAA+AGG | - | chr1.4:65337672-65337691 | None:intergenic | 40.0% | |
| AAGGTTGTGTATTCCAAACC+TGG | - | chr1.4:65338643-65338662 | None:intergenic | 40.0% | |
| AATACACAACCTTGCGATAG+AGG | + | chr1.4:65338650-65338669 | MS.gene52609:CDS | 40.0% | |
| AGAGGTGAAGGAAGAGAAAA+GGG | - | chr1.4:65337671-65337690 | None:intergenic | 40.0% | |
| CATGTAAAACCAGCATTAGG+AGG | + | chr1.4:65339070-65339089 | MS.gene52609:CDS | 40.0% | |
| CCAAAGGGTTATAAAGCTGT+CGG | + | chr1.4:65338491-65338510 | MS.gene52609:CDS | 40.0% | |
| CTCGCAAACTTCTGTTAGAT+CGG | - | chr1.4:65338576-65338595 | None:intergenic | 40.0% | |
| GAGTCATTACAGAACCATGT+TGG | + | chr1.4:65339500-65339519 | MS.gene52609:CDS | 40.0% | |
| GATCAGCGTCAAAGAATTCT+GGG | - | chr1.4:65337643-65337662 | None:intergenic | 40.0% | |
| GATGGCATGTATTTCTCATC+AGG | - | chr1.4:65338851-65338870 | None:intergenic | 40.0% | |
| GCATGAATCTGGTTGAGATT+CGG | - | chr1.4:65338791-65338810 | None:intergenic | 40.0% | |
| GGATCATCCAAACTTGGAAT+AGG | + | chr1.4:65339391-65339410 | MS.gene52609:CDS | 40.0% | |
| GGTTGCAATATATGAGAGAG+TGG | + | chr1.4:65339521-65339540 | MS.gene52609:CDS | 40.0% | |
| TATACTGCGGGTAATGCAAA+GGG | + | chr1.4:65338908-65338927 | MS.gene52609:CDS | 40.0% | |
| TATCACGGCACAAATTTACC+TGG | + | chr1.4:65338944-65338963 | MS.gene52609:CDS | 40.0% | |
| TCTTCAACTTTCGGTTCATC+TGG | - | chr1.4:65338536-65338555 | None:intergenic | 40.0% | |
| TTGTGAATGATCTACTCAGG+TGG | + | chr1.4:65338125-65338144 | MS.gene52609:intron | 40.0% | |
| TTTCTCGCATCTTCATTGGT+AGG | - | chr1.4:65339007-65339026 | None:intergenic | 40.0% | |
| ! | AATCCATCTGGAATCTCCAA+AGG | - | chr1.4:65338272-65338291 | None:intergenic | 40.0% |
| ! | AATGACACTTTAAGGGTTGC+AGG | - | chr1.4:65339142-65339161 | None:intergenic | 40.0% |
| ! | ACAGCTTTATAACCCTTTGG+AGG | - | chr1.4:65338491-65338510 | None:intergenic | 40.0% |
| ! | CAGCTTTATAACCCTTTGGA+GGG | - | chr1.4:65338490-65338509 | None:intergenic | 40.0% |
| ! | GCTCAATAAGAGCATGAATC+TGG | - | chr1.4:65338802-65338821 | None:intergenic | 40.0% |
| ! | GGAGCAATTTTGTATACTGC+GGG | + | chr1.4:65338896-65338915 | MS.gene52609:CDS | 40.0% |
| ! | TTATAACCCTTTGGAGGGTT+AGG | - | chr1.4:65338485-65338504 | None:intergenic | 40.0% |
| !! | AAGTGGCTTTTTAAGAGCTG+GGG | - | chr1.4:65338405-65338424 | None:intergenic | 40.0% |
| !! | AATTCTAACGGAAAGGCACT+AGG | + | chr1.4:65338230-65338249 | MS.gene52609:CDS | 40.0% |
| !! | TGGTTGCGAGTGTTTTTGTT+GGG | + | chr1.4:65337610-65337629 | MS.gene52609:CDS | 40.0% |
| !! | TTGGTTGCGAGTGTTTTTGT+TGG | + | chr1.4:65337609-65337628 | MS.gene52609:CDS | 40.0% |
| !!! | GTGTCGTGGTTTTTCAAGAA+TGG | + | chr1.4:65338875-65338894 | MS.gene52609:CDS | 40.0% |
| !!! | GTTTTTTTCTCTGAGCACAG+TGG | + | chr1.4:65339256-65339275 | MS.gene52609:CDS | 40.0% |
| !!! | TGGGTTTTTTGCCCATTCAA+TGG | + | chr1.4:65339115-65339134 | MS.gene52609:CDS | 40.0% |
| AAAAACCACGACACCGATGA+TGG | - | chr1.4:65338869-65338888 | None:intergenic | 45.0% | |
| AAGGAGAAGGACAATTGGCT+AGG | + | chr1.4:65339685-65339704 | MS.gene52609:CDS | 45.0% | |
| AGAATACCTTGTGGCCATTG+TGG | - | chr1.4:65337695-65337714 | None:intergenic | 45.0% | |
| AGCCAATTGTCCTTCTCCTT+TGG | - | chr1.4:65339685-65339704 | None:intergenic | 45.0% | |
| ATGCTAGCTATCCTCATGCA+GGG | + | chr1.4:65339356-65339375 | MS.gene52609:CDS | 45.0% | |
| ATTGTTGCTGCCGAGTATCT+TGG | + | chr1.4:65339472-65339491 | MS.gene52609:CDS | 45.0% | |
| CAAGTTTGGATGATCCCTGA+AGG | - | chr1.4:65339387-65339406 | None:intergenic | 45.0% | |
| CCAAGACAGGAAAATCCATC+TGG | - | chr1.4:65338284-65338303 | None:intergenic | 45.0% | |
| CCATCATTATATCCTCCACC+AGG | - | chr1.4:65338965-65338984 | None:intergenic | 45.0% | |
| CCCAAGTGATATTCTTCCAC+CGG | - | chr1.4:65338159-65338178 | None:intergenic | 45.0% | |
| CCGGTGGAAGAATATCACTT+GGG | + | chr1.4:65338156-65338175 | MS.gene52609:CDS | 45.0% | |
| CCTGGTGGAGGATATAATGA+TGG | + | chr1.4:65338962-65338981 | MS.gene52609:CDS | 45.0% | |
| CTTCAGGGATCATCCAAACT+TGG | + | chr1.4:65339385-65339404 | MS.gene52609:CDS | 45.0% | |
| GAAGGAAGAGAAAAGGGAAG+TGG | - | chr1.4:65337665-65337684 | None:intergenic | 45.0% | |
| GAAGGGAAACATAGAGAGTG+CGG | + | chr1.4:65339036-65339055 | MS.gene52609:CDS | 45.0% | |
| GACTCCATCACCAAGATACT+CGG | - | chr1.4:65339485-65339504 | None:intergenic | 45.0% | |
| GCGAACTCCTATTCCAAGTT+TGG | - | chr1.4:65339401-65339420 | None:intergenic | 45.0% | |
| GGATCAGCGTCAAAGAATTC+TGG | - | chr1.4:65337644-65337663 | None:intergenic | 45.0% | |
| GTATACTGCGGGTAATGCAA+AGG | + | chr1.4:65338907-65338926 | MS.gene52609:CDS | 45.0% | |
| GTCCAAAGGAGAAGGACAAT+TGG | + | chr1.4:65339680-65339699 | MS.gene52609:CDS | 45.0% | |
| TCTGTCGGAACATTCTTCTG+TGG | + | chr1.4:65338692-65338711 | MS.gene52609:CDS | 45.0% | |
| TGAATGATCTACTCAGGTGG+CGG | + | chr1.4:65338128-65338147 | MS.gene52609:intron | 45.0% | |
| TGAGCACAGTGGAGGTAAAT+GGG | + | chr1.4:65339267-65339286 | MS.gene52609:CDS | 45.0% | |
| TTCCTTCACCTCTTCCACAA+TGG | + | chr1.4:65337678-65337697 | MS.gene52609:CDS | 45.0% | |
| ! | AGACCTTTGGAGATTCCAGA+TGG | + | chr1.4:65338266-65338285 | MS.gene52609:CDS | 45.0% |
| ! | CCGACAGCTTTATAACCCTT+TGG | - | chr1.4:65338494-65338513 | None:intergenic | 45.0% |
| ! | CTAGCTAGAGGTGTATCTGT+CGG | + | chr1.4:65338677-65338696 | MS.gene52609:CDS | 45.0% |
| ! | TTTCGGTTCATCTGGATTGG+TGG | - | chr1.4:65338528-65338547 | None:intergenic | 45.0% |
| ! | TTTTTCTCTGAGCACAGTGG+AGG | + | chr1.4:65339259-65339278 | MS.gene52609:CDS | 45.0% |
| !! | CCAGATGGATTTTCCTGTCT+TGG | + | chr1.4:65338281-65338300 | MS.gene52609:CDS | 45.0% |
| !! | GATAGAGGTATCCTAGCTAG+AGG | + | chr1.4:65338665-65338684 | MS.gene52609:CDS | 45.0% |
| AAGAGCTGGGGATTCTGACT+CGG | - | chr1.4:65338393-65338412 | None:intergenic | 50.0% | |
| ACAAGAACGTGTCCTCGCAA+CGG | - | chr1.4:65338332-65338351 | None:intergenic | 50.0% | |
| AGGGTTGCAGGTCCATTGAA+TGG | - | chr1.4:65339130-65339149 | None:intergenic | 50.0% | |
| CACGGCACAAATTTACCTGG+TGG | + | chr1.4:65338947-65338966 | MS.gene52609:CDS | 50.0% | |
| CATGCAGGGACTTACCTTCA+GGG | + | chr1.4:65339370-65339389 | MS.gene52609:CDS | 50.0% | |
| CATGCTAGCTATCCTCATGC+AGG | + | chr1.4:65339355-65339374 | MS.gene52609:CDS | 50.0% | |
| CGACAGATACACCTCTAGCT+AGG | - | chr1.4:65338679-65338698 | None:intergenic | 50.0% | |
| CGGTGAACATGTCGGTGATT+GGG | + | chr1.4:65339186-65339205 | MS.gene52609:CDS | 50.0% | |
| CTGAGCACAGTGGAGGTAAA+TGG | + | chr1.4:65339266-65339285 | MS.gene52609:CDS | 50.0% | |
| GACTCGGAACAATCAGCTTG+AGG | - | chr1.4:65338377-65338396 | None:intergenic | 50.0% | |
| GCCGGTGGAAGAATATCACT+TGG | + | chr1.4:65338155-65338174 | MS.gene52609:CDS | 50.0% | |
| GCTAGGATACCTCTATCGCA+AGG | - | chr1.4:65338662-65338681 | None:intergenic | 50.0% | |
| GGCACAAATTTACCTGGTGG+AGG | + | chr1.4:65338950-65338969 | MS.gene52609:CDS | 50.0% | |
| GGGTTGCAGGTCCATTGAAT+GGG | - | chr1.4:65339129-65339148 | None:intergenic | 50.0% | |
| GTAAAGGCTCCTCCTAATGC+TGG | - | chr1.4:65339082-65339101 | None:intergenic | 50.0% | |
| GTGGCAGTAGTAACCAAGAC+AGG | - | chr1.4:65338297-65338316 | None:intergenic | 50.0% | |
| TCATGCAGGGACTTACCTTC+AGG | + | chr1.4:65339369-65339388 | MS.gene52609:CDS | 50.0% | |
| TCCTCACCAGAAAGCTCTGT+TGG | - | chr1.4:65339649-65339668 | None:intergenic | 50.0% | |
| TCCTTCTCCTTTGGACCAGT+TGG | - | chr1.4:65339676-65339695 | None:intergenic | 50.0% | |
| TCGGTGAACATGTCGGTGAT+TGG | + | chr1.4:65339185-65339204 | MS.gene52609:CDS | 50.0% | |
| TGAAGGTAAGTCCCTGCATG+AGG | - | chr1.4:65339370-65339389 | None:intergenic | 50.0% | |
| TGGTTGCCTAACCCTCCAAA+GGG | + | chr1.4:65338476-65338495 | MS.gene52609:CDS | 50.0% | |
| TTGGTTGCCTAACCCTCCAA+AGG | + | chr1.4:65338475-65338494 | MS.gene52609:CDS | 50.0% | |
| ! | AACAGAGCTTTCTGGTGAGG+AGG | + | chr1.4:65339648-65339667 | MS.gene52609:CDS | 50.0% |
| ! | ACAGAGCTTTCTGGTGAGGA+GGG | + | chr1.4:65339649-65339668 | MS.gene52609:CDS | 50.0% |
| ! | TCCAACAGAGCTTTCTGGTG+AGG | + | chr1.4:65339645-65339664 | MS.gene52609:CDS | 50.0% |
| AGGACACGTTCTTGTCGCTC+GGG | + | chr1.4:65338337-65338356 | MS.gene52609:CDS | 55.0% | |
| CCTCTTCCACAATGGCCACA+AGG | + | chr1.4:65337686-65337705 | MS.gene52609:CDS | 55.0% | |
| CCTTGTGGCCATTGTGGAAG+AGG | - | chr1.4:65337689-65337708 | None:intergenic | 55.0% | |
| CTTCGCGTGAGCAACTTCAC+CGG | + | chr1.4:65339220-65339239 | MS.gene52609:CDS | 55.0% | |
| GAGGACACGTTCTTGTCGCT+CGG | + | chr1.4:65338336-65338355 | MS.gene52609:CDS | 55.0% | |
| GCAACGGCTGATCATTGGAG+TGG | - | chr1.4:65338316-65338335 | None:intergenic | 55.0% | |
| GCAACTTCACCGGAGAGCTT+TGG | + | chr1.4:65339230-65339249 | MS.gene52609:CDS | 55.0% | |
| GCCAACTGGTCCAAAGGAGA+AGG | + | chr1.4:65339672-65339691 | MS.gene52609:CDS | 55.0% | |
| GCTGCCGAGTATCTTGGTGA+TGG | + | chr1.4:65339478-65339497 | MS.gene52609:CDS | 55.0% | |
| GGCCATTGTGGAAGAGGTGA+AGG | - | chr1.4:65337683-65337702 | None:intergenic | 55.0% | |
| GGTGAAGTTGCTCACGCGAA+GGG | - | chr1.4:65339221-65339240 | None:intergenic | 55.0% | |
| TCCAATGATCAGCCGTTGCG+AGG | + | chr1.4:65338317-65338336 | MS.gene52609:CDS | 55.0% | |
| TCCTCGCAACGGCTGATCAT+TGG | - | chr1.4:65338321-65338340 | None:intergenic | 55.0% | |
| ! | CAGAGCTTTCTGGTGAGGAG+GGG | + | chr1.4:65339650-65339669 | MS.gene52609:CDS | 55.0% |
| !! | ACATGCCATCATCGGTGTCG+TGG | + | chr1.4:65338861-65338880 | MS.gene52609:CDS | 55.0% |
| !! | TACTCAGGTGGCGGTTTTGC+CGG | + | chr1.4:65338137-65338156 | MS.gene52609:intron | 55.0% |
| CGGTGAAGTTGCTCACGCGA+AGG | - | chr1.4:65339222-65339241 | None:intergenic | 60.0% | |
| GGAGGGGCCAACTGGTCCAA+AGG | + | chr1.4:65339666-65339685 | MS.gene52609:CDS | 65.0% | |
| TCTGGTGAGGAGGGGCCAAC+TGG | + | chr1.4:65339658-65339677 | MS.gene52609:CDS | 65.0% | |
| !! | TCAGGTGGCGGTTTTGCCGG+TGG | + | chr1.4:65338140-65338159 | MS.gene52609:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 65337605 | 65339723 | 65337605 | ID=MS.gene52609 |
| chr1.4 | mRNA | 65337605 | 65339723 | 65337605 | ID=MS.gene52609.t1;Parent=MS.gene52609 |
| chr1.4 | exon | 65337605 | 65337707 | 65337605 | ID=MS.gene52609.t1.exon1;Parent=MS.gene52609.t1 |
| chr1.4 | CDS | 65337605 | 65337707 | 65337605 | ID=cds.MS.gene52609.t1;Parent=MS.gene52609.t1 |
| chr1.4 | exon | 65338144 | 65339723 | 65338144 | ID=MS.gene52609.t1.exon2;Parent=MS.gene52609.t1 |
| chr1.4 | CDS | 65338144 | 65339723 | 65338144 | ID=cds.MS.gene52609.t1;Parent=MS.gene52609.t1 |
| Gene Sequence |
| Protein sequence |
