Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52616.t1 | XP_003590981.1 | 98.4 | 560 | 9 | 0 | 1 | 560 | 1 | 560 | 1.20E-304 | 1055 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52616.t1 | G7I6T7 | 98.4 | 560 | 9 | 0 | 1 | 560 | 1 | 560 | 8.5e-305 | 1055.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene52616 | 0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene52616 | 0.807682 | 4.49E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene52616 | 0.80526 | 1.45E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene52616 | 0.806364 | 8.53E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene52616 | 0.800736 | 1.25E-48 | -1.69E-46 |
| MS.gene050562 | MS.gene52616 | 0.808094 | 3.67E-50 | -1.69E-46 |
| MS.gene051209 | MS.gene52616 | 0.815658 | 8.26E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene52616 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene52616 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene05454 | MS.gene52616 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene52616 | 0.828439 | 8.98E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene52616 | 0.828123 | 1.07E-54 | -1.69E-46 |
| MS.gene055724 | MS.gene52616 | 0.80368 | 3.11E-49 | -1.69E-46 |
| MS.gene056363 | MS.gene52616 | 0.829939 | 3.89E-55 | -1.69E-46 |
| MS.gene056444 | MS.gene52616 | 0.801923 | 7.16E-49 | -1.69E-46 |
| MS.gene056519 | MS.gene52616 | 0.838792 | 2.33E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene52616 | 0.879364 | 1.32E-69 | -1.69E-46 |
| MS.gene056973 | MS.gene52616 | 0.832813 | 7.63E-56 | -1.69E-46 |
| MS.gene057174 | MS.gene52616 | 0.880523 | 5.12E-70 | -1.69E-46 |
| MS.gene058781 | MS.gene52616 | 0.818293 | 2.11E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene52616 | 0.81389 | 2.04E-51 | -1.69E-46 |
| MS.gene059634 | MS.gene52616 | 0.843462 | 1.38E-58 | -1.69E-46 |
| MS.gene05985 | MS.gene52616 | -0.803235 | 3.84E-49 | -1.69E-46 |
| MS.gene060522 | MS.gene52616 | 0.856277 | 3.59E-62 | -1.69E-46 |
| MS.gene060785 | MS.gene52616 | 0.80693 | 6.47E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene52616 | 0.857515 | 1.55E-62 | -1.69E-46 |
| MS.gene060935 | MS.gene52616 | 0.830946 | 2.21E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene52616 | 0.844815 | 5.99E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52616 | MS.gene60887 | PPI |
| MS.gene52616 | MS.gene000190 | PPI |
| MS.gene52616 | MS.gene33537 | PPI |
| MS.gene042258 | MS.gene52616 | PPI |
| MS.gene52616 | MS.gene60888 | PPI |
| MS.gene52616 | MS.gene042257 | PPI |
| MS.gene061203 | MS.gene52616 | PPI |
| MS.gene60886 | MS.gene52616 | PPI |
| MS.gene60884 | MS.gene52616 | PPI |
| MS.gene52616 | MS.gene043859 | PPI |
| MS.gene000191 | MS.gene52616 | PPI |
| MS.gene012606 | MS.gene52616 | PPI |
| MS.gene043858 | MS.gene52616 | PPI |
| MS.gene52616 | MS.gene000193 | PPI |
| MS.gene043855 | MS.gene52616 | PPI |
| MS.gene52616 | MS.gene60881 | PPI |
| MS.gene52616 | MS.gene60889 | PPI |
| MS.gene60883 | MS.gene52616 | PPI |
| MS.gene52616 | MS.gene000192 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52616.t1 | MTR_1g080370 | 98.571 | 560 | 8 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1147 |
| MS.gene52616.t1 | MTR_1g080410 | 98.571 | 560 | 8 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1147 |
| MS.gene52616.t1 | MTR_5g007860 | 55.903 | 576 | 225 | 7 | 5 | 558 | 37 | 605 | 0.0 | 667 |
| MS.gene52616.t1 | MTR_4g077620 | 55.185 | 569 | 240 | 8 | 1 | 558 | 3 | 567 | 0.0 | 652 |
| MS.gene52616.t1 | MTR_2g062430 | 47.434 | 565 | 265 | 12 | 6 | 558 | 8 | 552 | 1.06e-175 | 508 |
| MS.gene52616.t1 | MTR_2g067640 | 45.652 | 552 | 263 | 10 | 20 | 558 | 13 | 540 | 3.33e-171 | 496 |
| MS.gene52616.t1 | MTR_2g062410 | 46.196 | 552 | 270 | 10 | 18 | 558 | 50 | 585 | 6.32e-169 | 492 |
| MS.gene52616.t1 | MTR_2g062370 | 45.173 | 549 | 272 | 9 | 23 | 558 | 57 | 589 | 2.32e-162 | 475 |
| MS.gene52616.t1 | MTR_4g131710 | 44.828 | 551 | 273 | 10 | 23 | 558 | 51 | 585 | 1.71e-161 | 473 |
| MS.gene52616.t1 | MTR_2g062380 | 45.810 | 537 | 261 | 9 | 35 | 558 | 40 | 559 | 5.19e-156 | 458 |
| MS.gene52616.t1 | MTR_2g062340 | 44.689 | 546 | 243 | 9 | 23 | 558 | 20 | 516 | 2.13e-152 | 447 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52616.t1 | AT3G04350 | 64.510 | 572 | 186 | 7 | 1 | 560 | 1 | 567 | 0.0 | 759 |
| MS.gene52616.t1 | AT5G18490 | 64.825 | 543 | 174 | 7 | 22 | 560 | 24 | 553 | 0.0 | 736 |
| MS.gene52616.t1 | AT3G04350 | 65.421 | 535 | 171 | 6 | 35 | 560 | 16 | 545 | 0.0 | 726 |
| MS.gene52616.t1 | AT1G04090 | 54.073 | 577 | 243 | 9 | 1 | 560 | 1 | 572 | 0.0 | 653 |
| MS.gene52616.t1 | AT5G43950 | 53.578 | 573 | 242 | 9 | 1 | 558 | 1 | 564 | 0.0 | 629 |
| MS.gene52616.t1 | AT2G44260 | 45.772 | 544 | 267 | 9 | 23 | 558 | 29 | 552 | 1.96e-169 | 492 |
| MS.gene52616.t1 | AT2G44230 | 45.521 | 547 | 262 | 10 | 23 | 558 | 20 | 541 | 2.22e-168 | 489 |
| MS.gene52616.t1 | AT2G44260 | 45.677 | 532 | 261 | 9 | 35 | 558 | 71 | 582 | 6.72e-164 | 479 |
| MS.gene52616.t1 | AT3G01870 | 41.416 | 565 | 291 | 13 | 11 | 558 | 42 | 583 | 1.81e-140 | 419 |
| MS.gene52616.t1 | AT3G01880 | 40.925 | 562 | 292 | 13 | 15 | 558 | 50 | 589 | 3.84e-138 | 413 |
Find 139 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCATCAATGACACTTTA+AGG | 0.107306 | 1.1:-59670437 | None:intergenic |
| TAAACAAGTTTGAGAAAGTT+TGG | 0.235719 | 1.1:+59669488 | MS.gene52616:CDS |
| CTGAGCACAGTGGAGGTAAA+TGG | 0.247800 | 1.1:+59670556 | MS.gene52616:CDS |
| TTATTTCCAACAGAGCTTTC+TGG | 0.254169 | 1.1:+59670930 | MS.gene52616:CDS |
| CACTTAATTACTCGTTAATA+TGG | 0.260129 | 1.1:+59669710 | MS.gene52616:CDS |
| ATTCGATTTGGAGTTTATTA+AGG | 0.263278 | 1.1:+59670587 | MS.gene52616:CDS |
| AGCCAATTGTCCTTCTCCTT+TGG | 0.307063 | 1.1:-59670972 | None:intergenic |
| GCGAACTCCTATTCCAAGTT+TGG | 0.314359 | 1.1:-59670688 | None:intergenic |
| TGTCTTGATGAATAAACTAT+TGG | 0.322222 | 1.1:-59670618 | None:intergenic |
| ACAGAAAACCTAACAAATAT+TGG | 0.329471 | 1.1:-59670891 | None:intergenic |
| GATATAATGATGGTGCGTTT+TGG | 0.329648 | 1.1:+59670262 | MS.gene52616:CDS |
| CATCGAACTTCTTCAACTTT+CGG | 0.340671 | 1.1:-59669832 | None:intergenic |
| TCTTCAACTTTCGGTTCATC+TGG | 0.342527 | 1.1:-59669823 | None:intergenic |
| ATGGGTTAATGCATTCGATT+TGG | 0.345620 | 1.1:+59670575 | MS.gene52616:CDS |
| ATGATGAATGTGTTTACTTT+TGG | 0.348745 | 1.1:+59669746 | MS.gene52616:CDS |
| TCCTTCTCCTTTGGACCAGT+TGG | 0.349557 | 1.1:-59670963 | None:intergenic |
| ACATGCTTCCAATATTTGTT+AGG | 0.353415 | 1.1:+59670883 | MS.gene52616:CDS |
| AATGACACTTTAAGGGTTGC+AGG | 0.360391 | 1.1:-59670429 | None:intergenic |
| CATGCTCTCATTGAGCATTA+CGG | 0.360621 | 1.1:+59670096 | MS.gene52616:CDS |
| GGAACAATCAGCTTGAGATT+TGG | 0.364813 | 1.1:-59669659 | None:intergenic |
| GTTCATCAATGACACTTTAA+GGG | 0.377575 | 1.1:-59670436 | None:intergenic |
| GGATCAGAGTCAAAGAATTC+TGG | 0.378539 | 1.1:-59668873 | None:intergenic |
| TCTGGTGAGGAGGGGCCAAC+TGG | 0.379305 | 1.1:+59670948 | MS.gene52616:CDS |
| ATGCTCTCATTGAGCATTAC+GGG | 0.380356 | 1.1:+59670097 | MS.gene52616:CDS |
| AACTTTCGGTTCATCTGGAT+TGG | 0.384698 | 1.1:-59669818 | None:intergenic |
| TGGAGATGCACAAATTCTAA+TGG | 0.385168 | 1.1:+59669508 | MS.gene52616:CDS |
| CTGTTGGAAATAATTCAAAA+AGG | 0.390774 | 1.1:-59670920 | None:intergenic |
| AGAGGTGAAGGAAGAGAAAA+GGG | 0.395917 | 1.1:-59668900 | None:intergenic |
| AAGAGGTGAAGGAAGAGAAA+AGG | 0.400057 | 1.1:-59668901 | None:intergenic |
| TCATGCAGGGACTTACCTTC+AGG | 0.415789 | 1.1:+59670659 | MS.gene52616:CDS |
| TGTGGTTGGTAAGAGATGTT+TGG | 0.416589 | 1.1:+59668822 | None:intergenic |
| AGGGTTGCAGGTCCATTGAA+TGG | 0.426014 | 1.1:-59670417 | None:intergenic |
| TCCTCGCAACGGCTGATCAT+TGG | 0.426252 | 1.1:-59669608 | None:intergenic |
| GTTCATGTAAAACCAGCATT+AGG | 0.426763 | 1.1:+59670357 | MS.gene52616:CDS |
| CCGACGGCTTTATAACCCTT+TGG | 0.428360 | 1.1:-59669781 | None:intergenic |
| CTTCAGGGATCATCCAAACT+TGG | 0.432488 | 1.1:+59670675 | MS.gene52616:CDS |
| CGGTGAACATGTCGGTGATT+GGG | 0.432674 | 1.1:+59670476 | MS.gene52616:CDS |
| TCGGTGAACATGTCGGTGAT+TGG | 0.434338 | 1.1:+59670475 | MS.gene52616:CDS |
| CATATTAACGAGTAATTAAG+TGG | 0.438102 | 1.1:-59669709 | None:intergenic |
| GCAACTTCACCGGAGAGCTT+TGG | 0.443367 | 1.1:+59670520 | MS.gene52616:CDS |
| TTATAACCCTTTGGAGGGTT+AGG | 0.448233 | 1.1:-59669772 | None:intergenic |
| GGATCATCCAAACTTGGAAT+AGG | 0.450282 | 1.1:+59670681 | MS.gene52616:CDS |
| GATGGCATGTATTTCTCATC+AGG | 0.457793 | 1.1:-59670138 | None:intergenic |
| CCCAAGGGATATTCTTCCAC+CGG | 0.460403 | 1.1:-59669446 | None:intergenic |
| TCCTCACCAGAAAGCTCTGT+TGG | 0.461764 | 1.1:-59670936 | None:intergenic |
| GCATGAATCTGGTTGAGATT+CGG | 0.468325 | 1.1:-59670078 | None:intergenic |
| AATACACAACCTTGCGATAG+AGG | 0.468770 | 1.1:+59669940 | MS.gene52616:CDS |
| CCAAGACAGGAAAATCCATC+TGG | 0.469039 | 1.1:-59669571 | None:intergenic |
| GAGGACACGTTCTTGTCGCT+CGG | 0.471944 | 1.1:+59669626 | MS.gene52616:CDS |
| TGAGCACAGTGGAGGTAAAT+GGG | 0.475593 | 1.1:+59670557 | MS.gene52616:CDS |
| CTTTACTGATATTGCAATGT+GGG | 0.475927 | 1.1:+59670386 | MS.gene52616:CDS |
| GAAGGAAGAGAAAAGGGAAG+TGG | 0.478043 | 1.1:-59668894 | None:intergenic |
| TGCGAGAAATAATCTTAAGA+AGG | 0.480833 | 1.1:+59670308 | MS.gene52616:CDS |
| ACGGCTTTATAACCCTTTGG+AGG | 0.486012 | 1.1:-59669778 | None:intergenic |
| TTTCGGTTCATCTGGATTGG+TGG | 0.487936 | 1.1:-59669815 | None:intergenic |
| ATTGTTGCTGCCGAGTATCT+TGG | 0.490221 | 1.1:+59670762 | MS.gene52616:CDS |
| GCTCAATGAGAGCATGAATC+TGG | 0.490735 | 1.1:-59670089 | None:intergenic |
| GTCCAAAGGAGAAGGACAAT+TGG | 0.490950 | 1.1:+59670970 | MS.gene52616:CDS |
| CTCACAAACTTCTGTTAGAT+CGG | 0.493970 | 1.1:-59669863 | None:intergenic |
| GGGTTGCAGGTCCATTGAAT+GGG | 0.500640 | 1.1:-59670416 | None:intergenic |
| GCCGGTGGAAGAATATCCCT+TGG | 0.503378 | 1.1:+59669445 | MS.gene52616:CDS |
| CTACTTTGATTCTGAACAAG+TGG | 0.505519 | 1.1:+59670008 | MS.gene52616:CDS |
| CGGTGAAGTTGCTCACGCGA+AGG | 0.508371 | 1.1:-59670509 | None:intergenic |
| TTGTTCCGAGTCAGAATCCT+TGG | 0.510563 | 1.1:+59669675 | MS.gene52616:CDS |
| CATGCTAGCTATCCTCATGC+AGG | 0.510869 | 1.1:+59670645 | MS.gene52616:CDS |
| CCTTGTGGCCATTGTGGAAG+AGG | 0.512962 | 1.1:-59668918 | None:intergenic |
| CCACATTGCAATATCAGTAA+AGG | 0.513990 | 1.1:-59670385 | None:intergenic |
| TTGGTTGCCTAACCCTCCAA+AGG | 0.523651 | 1.1:+59669765 | MS.gene52616:CDS |
| AATTCTAATGGAAAGGCACT+AGG | 0.529623 | 1.1:+59669520 | MS.gene52616:CDS |
| CATGCAGGGACTTACCTTCA+GGG | 0.530671 | 1.1:+59670660 | MS.gene52616:CDS |
| AACAGAGCTTTCTGGTGAGG+AGG | 0.540070 | 1.1:+59670938 | MS.gene52616:CDS |
| GTATACTGCGGGTAATGCAA+AGG | 0.543009 | 1.1:+59670197 | MS.gene52616:CDS |
| ACAGAGCTTTCTGGTGAGGA+GGG | 0.543440 | 1.1:+59670939 | MS.gene52616:CDS |
| GTAAAGGCTCCTCCTAATGC+TGG | 0.544725 | 1.1:-59670369 | None:intergenic |
| AGGACACGTTCTTGTCGCTC+GGG | 0.549143 | 1.1:+59669627 | MS.gene52616:CDS |
| CCGGTGGAAGAATATCCCTT+GGG | 0.549609 | 1.1:+59669446 | MS.gene52616:CDS |
| AGACCTTTGGAGATTCCAGA+TGG | 0.551683 | 1.1:+59669556 | MS.gene52616:CDS |
| TTCCTTCACCTCTTCCACAA+TGG | 0.552183 | 1.1:+59668910 | MS.gene52616:CDS |
| GACTCCATCACCAAGATACT+CGG | 0.556847 | 1.1:-59670772 | None:intergenic |
| TTACTCGTTAATATGGTGCA+TGG | 0.557123 | 1.1:+59669717 | MS.gene52616:CDS |
| CGGCTTTATAACCCTTTGGA+GGG | 0.557691 | 1.1:-59669777 | None:intergenic |
| GGTGAAGTTGCTCACGCGAA+GGG | 0.560176 | 1.1:-59670508 | None:intergenic |
| ATTATTTCTCGCATCTTCAT+CGG | 0.561997 | 1.1:-59670298 | None:intergenic |
| CGTGAATCATATACAATGGT+AGG | 0.564534 | 1.1:-59670837 | None:intergenic |
| TCCAACAGAGCTTTCTGGTG+AGG | 0.565118 | 1.1:+59670935 | MS.gene52616:CDS |
| GCGAGAAATAATCTTAAGAA+GGG | 0.567421 | 1.1:+59670309 | MS.gene52616:CDS |
| TTTCTCGCATCTTCATCGGT+AGG | 0.570074 | 1.1:-59670294 | None:intergenic |
| ATGCACAAATTCTAATGGAA+AGG | 0.570132 | 1.1:+59669513 | MS.gene52616:CDS |
| TATACTGCGGGTAATGCAAA+GGG | 0.571900 | 1.1:+59670198 | MS.gene52616:CDS |
| CATGTAAAACCAGCATTAGG+AGG | 0.572269 | 1.1:+59670360 | MS.gene52616:CDS |
| AACATTGAGATGAACAAGAT+CGG | 0.572272 | 1.1:+59670456 | MS.gene52616:CDS |
| TGGTTGCCTAACCCTCCAAA+GGG | 0.582899 | 1.1:+59669766 | MS.gene52616:CDS |
| CTTCGCGTGAGCAACTTCAC+CGG | 0.582952 | 1.1:+59670510 | MS.gene52616:CDS |
| TCCAATGATCAGCCGTTGCG+AGG | 0.585934 | 1.1:+59669607 | MS.gene52616:CDS |
| GCCAACTGGTCCAAAGGAGA+AGG | 0.588714 | 1.1:+59670962 | MS.gene52616:CDS |
| GTGGCAGTAGTAACCAAGAC+AGG | 0.592567 | 1.1:-59669584 | None:intergenic |
| AAGGTTGTGTATTCCAAACC+TGG | 0.594362 | 1.1:-59669930 | None:intergenic |
| AATCCATCTGGAATCTCCAA+AGG | 0.594832 | 1.1:-59669559 | None:intergenic |
| ACATGCCATCATCGGTGTCG+TGG | 0.595421 | 1.1:+59670151 | MS.gene52616:CDS |
| CTCATATATTGCAACCAACA+TGG | 0.598495 | 1.1:-59670804 | None:intergenic |
| AAGAGCCAAGGATTCTGACT+CGG | 0.598761 | 1.1:-59669680 | None:intergenic |
| CCTCTTCCACAATGGCCACA+AGG | 0.602749 | 1.1:+59668918 | MS.gene52616:CDS |
| GGCACAAATTTACCTGGTGG+AGG | 0.603301 | 1.1:+59670240 | MS.gene52616:CDS |
| GGTTGCAATATATGAGAGAG+TGG | 0.604682 | 1.1:+59670811 | MS.gene52616:CDS |
| CATTGAGCATTACGGGCCAA+CGG | 0.604760 | 1.1:+59670104 | MS.gene52616:CDS |
| TGAGAAATACATGCCATCAT+CGG | 0.607689 | 1.1:+59670143 | MS.gene52616:CDS |
| CTAGCTAGAGGTGTATCTGT+CGG | 0.607900 | 1.1:+59669967 | MS.gene52616:CDS |
| TATCACGGCACAAATTTACC+TGG | 0.610377 | 1.1:+59670234 | MS.gene52616:CDS |
| AAGGAGAAGGACAATTGGCT+AGG | 0.611868 | 1.1:+59670975 | MS.gene52616:CDS |
| TAGTTTATTCATCAAGACAT+GGG | 0.614112 | 1.1:+59670622 | MS.gene52616:CDS |
| CCAAAGGGTTATAAAGCCGT+CGG | 0.615266 | 1.1:+59669781 | MS.gene52616:CDS |
| GGAGGGGCCAACTGGTCCAA+AGG | 0.615580 | 1.1:+59670956 | MS.gene52616:CDS |
| CCTGGTGGAGGATATAATGA+TGG | 0.615594 | 1.1:+59670252 | MS.gene52616:CDS |
| TCAGGATGAAAATATACCGT+TGG | 0.617396 | 1.1:-59670120 | None:intergenic |
| GGTGGTAACTACTATGCCGA+CGG | 0.618472 | 1.1:-59669797 | None:intergenic |
| CAAGTTTGGATGATCCCTGA+AGG | 0.618933 | 1.1:-59670674 | None:intergenic |
| GGTAAAGCTATAGATTATCA+CGG | 0.619614 | 1.1:+59670219 | MS.gene52616:CDS |
| CCTTTACTGATATTGCAATG+TGG | 0.624376 | 1.1:+59670385 | MS.gene52616:CDS |
| CACGGCACAAATTTACCTGG+TGG | 0.625316 | 1.1:+59670237 | MS.gene52616:CDS |
| ATAATACCTTGTGGCCATTG+TGG | 0.625787 | 1.1:-59668924 | None:intergenic |
| CCATCATTATATCCTCCACC+AGG | 0.627153 | 1.1:-59670252 | None:intergenic |
| GTTGCAATATATGAGAGAGT+GGG | 0.627285 | 1.1:+59670812 | MS.gene52616:CDS |
| GGCCATTGTGGAAGAGGTGA+AGG | 0.627997 | 1.1:-59668912 | None:intergenic |
| GCTGCCGAGTATCTTGGTGA+TGG | 0.635810 | 1.1:+59670768 | MS.gene52616:CDS |
| GAAGGGAAACATAGAGAGTG+CGG | 0.636222 | 1.1:+59670326 | MS.gene52616:CDS |
| TGAAGGTAAGTCCCTGCATG+AGG | 0.636865 | 1.1:-59670657 | None:intergenic |
| ATAGTTTATTCATCAAGACA+TGG | 0.637290 | 1.1:+59670621 | MS.gene52616:CDS |
| ACAAGAACGTGTCCTCGCAA+CGG | 0.637737 | 1.1:-59669619 | None:intergenic |
| TCTGTCGGAACATTCTTCTG+TGG | 0.649136 | 1.1:+59669982 | MS.gene52616:CDS |
| AACAAGATCGGTGAACATGT+CGG | 0.653405 | 1.1:+59670468 | MS.gene52616:CDS |
| CACTTGTTCAGAATCAAAGT+AGG | 0.653816 | 1.1:-59670007 | None:intergenic |
| AGAACGTGAATCATATACAA+TGG | 0.654517 | 1.1:-59670841 | None:intergenic |
| GCTAGCATACCTCTATCGCA+AGG | 0.655324 | 1.1:-59669949 | None:intergenic |
| ATGCTAGCTATCCTCATGCA+GGG | 0.655682 | 1.1:+59670646 | MS.gene52616:CDS |
| CAGAGCTTTCTGGTGAGGAG+GGG | 0.657357 | 1.1:+59670940 | MS.gene52616:CDS |
| GCAACGGCTGATCATTGGAG+TGG | 0.664542 | 1.1:-59669603 | None:intergenic |
| GAGTCATTACAGAACCATGT+TGG | 0.666649 | 1.1:+59670790 | MS.gene52616:CDS |
| TTGCAATATATGAGAGAGTG+GGG | 0.676061 | 1.1:+59670813 | MS.gene52616:CDS |
| GATAGAGGTATGCTAGCTAG+AGG | 0.685865 | 1.1:+59669955 | MS.gene52616:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAAATAATAGAAAA+AGG | - | chr1.1:59668961-59668980 | None:intergenic | 10.0% |
| !! | AGAAAAAAATAATAGAAAAA+GGG | - | chr1.1:59668960-59668979 | None:intergenic | 10.0% |
| !! | AAAAATAATAGAAAAAGGGA+AGG | - | chr1.1:59668956-59668975 | None:intergenic | 20.0% |
| !!! | AATACTATTTGATTTCGTTT+TGG | + | chr1.1:59669324-59669343 | MS.gene52616:intron | 20.0% |
| !!! | ATATTTGTGCTGTTTTTTAT+TGG | + | chr1.1:59669114-59669133 | MS.gene52616:intron | 20.0% |
| !!! | TGCTAAAAGTAATTTTATTC+TGG | + | chr1.1:59670719-59670738 | MS.gene52616:CDS | 20.0% |
| ! | ACAGAAAACCTAACAAATAT+TGG | - | chr1.1:59670894-59670913 | None:intergenic | 25.0% |
| ! | ATAGTTTATTCATCAAGACA+TGG | + | chr1.1:59670621-59670640 | MS.gene52616:CDS | 25.0% |
| ! | CACTTAATTACTCGTTAATA+TGG | + | chr1.1:59669710-59669729 | MS.gene52616:CDS | 25.0% |
| ! | CATATTAACGAGTAATTAAG+TGG | - | chr1.1:59669712-59669731 | None:intergenic | 25.0% |
| ! | CTGTTGGAAATAATTCAAAA+AGG | - | chr1.1:59670923-59670942 | None:intergenic | 25.0% |
| ! | TAAACAAGTTTGAGAAAGTT+TGG | + | chr1.1:59669488-59669507 | MS.gene52616:CDS | 25.0% |
| ! | TAGTTTATTCATCAAGACAT+GGG | + | chr1.1:59670622-59670641 | MS.gene52616:CDS | 25.0% |
| ! | TGTCTTGATGAATAAACTAT+TGG | - | chr1.1:59670621-59670640 | None:intergenic | 25.0% |
| !! | ATGATGAATGTGTTTACTTT+TGG | + | chr1.1:59669746-59669765 | MS.gene52616:CDS | 25.0% |
| !! | GGTATTACTGTGATTAATTT+TGG | + | chr1.1:59669135-59669154 | MS.gene52616:intron | 25.0% |
| !! | TTACTGTGTTCTTTCTATTT+TGG | + | chr1.1:59669044-59669063 | MS.gene52616:intron | 25.0% |
| !! | TTTCACATTTTATAGACCTT+TGG | + | chr1.1:59669543-59669562 | MS.gene52616:CDS | 25.0% |
| !!! | AATATTTGTTAGGTTTTCTG+TGG | + | chr1.1:59670893-59670912 | MS.gene52616:CDS | 25.0% |
| !!! | ATTCGATTTGGAGTTTATTA+AGG | + | chr1.1:59670587-59670606 | MS.gene52616:CDS | 25.0% |
| !!! | GTAGTATTTTTTGCAGATAT+TGG | + | chr1.1:59669163-59669182 | MS.gene52616:intron | 25.0% |
| !!! | TTTGAGTTGATGATTAAAAC+AGG | - | chr1.1:59669007-59669026 | None:intergenic | 25.0% |
| !!! | TTTGATTTCGTTTTGGTTAT+TGG | + | chr1.1:59669331-59669350 | MS.gene52616:intron | 25.0% |
| AACATTGAGATGAACAAGAT+CGG | + | chr1.1:59670456-59670475 | MS.gene52616:CDS | 30.0% | |
| ACATGCTTCCAATATTTGTT+AGG | + | chr1.1:59670883-59670902 | MS.gene52616:CDS | 30.0% | |
| AGAAAAATTCTTTCCAGGTT+TGG | + | chr1.1:59669917-59669936 | MS.gene52616:CDS | 30.0% | |
| AGAACGTGAATCATATACAA+TGG | - | chr1.1:59670844-59670863 | None:intergenic | 30.0% | |
| ATGCACAAATTCTAATGGAA+AGG | + | chr1.1:59669513-59669532 | MS.gene52616:CDS | 30.0% | |
| CTTTACTGATATTGCAATGT+GGG | + | chr1.1:59670386-59670405 | MS.gene52616:CDS | 30.0% | |
| GCGAGAAATAATCTTAAGAA+GGG | + | chr1.1:59670309-59670328 | MS.gene52616:CDS | 30.0% | |
| GGTAAAGCTATAGATTATCA+CGG | + | chr1.1:59670219-59670238 | MS.gene52616:CDS | 30.0% | |
| GTCAAAGAAAAATTCTTTCC+AGG | + | chr1.1:59669912-59669931 | MS.gene52616:CDS | 30.0% | |
| GTTCATCAATGACACTTTAA+GGG | - | chr1.1:59670439-59670458 | None:intergenic | 30.0% | |
| TGCGAGAAATAATCTTAAGA+AGG | + | chr1.1:59670308-59670327 | MS.gene52616:CDS | 30.0% | |
| TGTTCATCAATGACACTTTA+AGG | - | chr1.1:59670440-59670459 | None:intergenic | 30.0% | |
| ! | ATTATTTCTCGCATCTTCAT+CGG | - | chr1.1:59670301-59670320 | None:intergenic | 30.0% |
| !! | TGTAACTTGTATTTTCCCAA+GGG | - | chr1.1:59669464-59669483 | None:intergenic | 30.0% |
| !! | TTGTAACTTGTATTTTCCCA+AGG | - | chr1.1:59669465-59669484 | None:intergenic | 30.0% |
| CACTTGTTCAGAATCAAAGT+AGG | - | chr1.1:59670010-59670029 | None:intergenic | 35.0% | |
| CATCGAACTTCTTCAACTTT+CGG | - | chr1.1:59669835-59669854 | None:intergenic | 35.0% | |
| CCACATTGCAATATCAGTAA+AGG | - | chr1.1:59670388-59670407 | None:intergenic | 35.0% | |
| CCTTTACTGATATTGCAATG+TGG | + | chr1.1:59670385-59670404 | MS.gene52616:CDS | 35.0% | |
| CGTGAATCATATACAATGGT+AGG | - | chr1.1:59670840-59670859 | None:intergenic | 35.0% | |
| CTACTTTGATTCTGAACAAG+TGG | + | chr1.1:59670008-59670027 | MS.gene52616:CDS | 35.0% | |
| CTCACAAACTTCTGTTAGAT+CGG | - | chr1.1:59669866-59669885 | None:intergenic | 35.0% | |
| CTCATATATTGCAACCAACA+TGG | - | chr1.1:59670807-59670826 | None:intergenic | 35.0% | |
| GTTCATGTAAAACCAGCATT+AGG | + | chr1.1:59670357-59670376 | MS.gene52616:CDS | 35.0% | |
| GTTGCAATATATGAGAGAGT+GGG | + | chr1.1:59670812-59670831 | MS.gene52616:CDS | 35.0% | |
| TCAGGATGAAAATATACCGT+TGG | - | chr1.1:59670123-59670142 | None:intergenic | 35.0% | |
| TGAGAAATACATGCCATCAT+CGG | + | chr1.1:59670143-59670162 | MS.gene52616:CDS | 35.0% | |
| TGGAGATGCACAAATTCTAA+TGG | + | chr1.1:59669508-59669527 | MS.gene52616:CDS | 35.0% | |
| TTACTCGTTAATATGGTGCA+TGG | + | chr1.1:59669717-59669736 | MS.gene52616:CDS | 35.0% | |
| TTATTTCCAACAGAGCTTTC+TGG | + | chr1.1:59670930-59670949 | MS.gene52616:CDS | 35.0% | |
| TTGCAATATATGAGAGAGTG+GGG | + | chr1.1:59670813-59670832 | MS.gene52616:CDS | 35.0% | |
| ! | ATGGGTTAATGCATTCGATT+TGG | + | chr1.1:59670575-59670594 | MS.gene52616:CDS | 35.0% |
| ! | TGGAGCAATTTTGTATACTG+CGG | + | chr1.1:59670185-59670204 | MS.gene52616:CDS | 35.0% |
| !! | AATTCTAATGGAAAGGCACT+AGG | + | chr1.1:59669520-59669539 | MS.gene52616:CDS | 35.0% |
| !! | AGGTTGATGATAATACCTTG+TGG | - | chr1.1:59668936-59668955 | None:intergenic | 35.0% |
| !! | GATATAATGATGGTGCGTTT+TGG | + | chr1.1:59670262-59670281 | MS.gene52616:CDS | 35.0% |
| !!! | TGGTTTTGAGTGTTCTTGTT+GGG | + | chr1.1:59668842-59668861 | MS.gene52616:CDS | 35.0% |
| !!! | TTGGTTTTGAGTGTTCTTGT+TGG | + | chr1.1:59668841-59668860 | MS.gene52616:CDS | 35.0% |
| AAAAACAGACCAAAGCTCTC+CGG | - | chr1.1:59670532-59670551 | None:intergenic | 40.0% | |
| AACAAGATCGGTGAACATGT+CGG | + | chr1.1:59670468-59670487 | MS.gene52616:CDS | 40.0% | |
| AACTTTCGGTTCATCTGGAT+TGG | - | chr1.1:59669821-59669840 | None:intergenic | 40.0% | |
| AAGAGGTGAAGGAAGAGAAA+AGG | - | chr1.1:59668904-59668923 | None:intergenic | 40.0% | |
| AAGGTTGTGTATTCCAAACC+TGG | - | chr1.1:59669933-59669952 | None:intergenic | 40.0% | |
| AATACACAACCTTGCGATAG+AGG | + | chr1.1:59669940-59669959 | MS.gene52616:CDS | 40.0% | |
| AGAGGTGAAGGAAGAGAAAA+GGG | - | chr1.1:59668903-59668922 | None:intergenic | 40.0% | |
| ATAATACCTTGTGGCCATTG+TGG | - | chr1.1:59668927-59668946 | None:intergenic | 40.0% | |
| ATGCTCTCATTGAGCATTAC+GGG | + | chr1.1:59670097-59670116 | MS.gene52616:CDS | 40.0% | |
| CATGCTCTCATTGAGCATTA+CGG | + | chr1.1:59670096-59670115 | MS.gene52616:CDS | 40.0% | |
| CATGTAAAACCAGCATTAGG+AGG | + | chr1.1:59670360-59670379 | MS.gene52616:CDS | 40.0% | |
| GAGTCATTACAGAACCATGT+TGG | + | chr1.1:59670790-59670809 | MS.gene52616:CDS | 40.0% | |
| GATGGCATGTATTTCTCATC+AGG | - | chr1.1:59670141-59670160 | None:intergenic | 40.0% | |
| GCATGAATCTGGTTGAGATT+CGG | - | chr1.1:59670081-59670100 | None:intergenic | 40.0% | |
| GGAACAATCAGCTTGAGATT+TGG | - | chr1.1:59669662-59669681 | None:intergenic | 40.0% | |
| GGATCAGAGTCAAAGAATTC+TGG | - | chr1.1:59668876-59668895 | None:intergenic | 40.0% | |
| GGATCATCCAAACTTGGAAT+AGG | + | chr1.1:59670681-59670700 | MS.gene52616:CDS | 40.0% | |
| GGTTGCAATATATGAGAGAG+TGG | + | chr1.1:59670811-59670830 | MS.gene52616:CDS | 40.0% | |
| TATACTGCGGGTAATGCAAA+GGG | + | chr1.1:59670198-59670217 | MS.gene52616:CDS | 40.0% | |
| TATCACGGCACAAATTTACC+TGG | + | chr1.1:59670234-59670253 | MS.gene52616:CDS | 40.0% | |
| TCTTCAACTTTCGGTTCATC+TGG | - | chr1.1:59669826-59669845 | None:intergenic | 40.0% | |
| ! | AATCCATCTGGAATCTCCAA+AGG | - | chr1.1:59669562-59669581 | None:intergenic | 40.0% |
| ! | AATGACACTTTAAGGGTTGC+AGG | - | chr1.1:59670432-59670451 | None:intergenic | 40.0% |
| ! | GGAGCAATTTTGTATACTGC+GGG | + | chr1.1:59670186-59670205 | MS.gene52616:CDS | 40.0% |
| ! | TTATAACCCTTTGGAGGGTT+AGG | - | chr1.1:59669775-59669794 | None:intergenic | 40.0% |
| !! | AAGTGGCTTTTTAAGAGCCA+AGG | - | chr1.1:59669695-59669714 | None:intergenic | 40.0% |
| !!! | GTGTCGTGGTTTTTCAAGAA+TGG | + | chr1.1:59670165-59670184 | MS.gene52616:CDS | 40.0% |
| !!! | GTTTTTTTCTCTGAGCACAG+TGG | + | chr1.1:59670546-59670565 | MS.gene52616:CDS | 40.0% |
| !!! | TGGGTTTTTTGCCCATTCAA+TGG | + | chr1.1:59670405-59670424 | MS.gene52616:CDS | 40.0% |
| AAAAACCACGACACCGATGA+TGG | - | chr1.1:59670159-59670178 | None:intergenic | 45.0% | |
| AAGAGCCAAGGATTCTGACT+CGG | - | chr1.1:59669683-59669702 | None:intergenic | 45.0% | |
| AAGGAGAAGGACAATTGGCT+AGG | + | chr1.1:59670975-59670994 | MS.gene52616:CDS | 45.0% | |
| AGCCAATTGTCCTTCTCCTT+TGG | - | chr1.1:59670975-59670994 | None:intergenic | 45.0% | |
| AGCTTGTGAGTGATCTACTC+AGG | + | chr1.1:59669412-59669431 | MS.gene52616:intron | 45.0% | |
| ATGCTAGCTATCCTCATGCA+GGG | + | chr1.1:59670646-59670665 | MS.gene52616:CDS | 45.0% | |
| ATTGTTGCTGCCGAGTATCT+TGG | + | chr1.1:59670762-59670781 | MS.gene52616:CDS | 45.0% | |
| CAAGTTTGGATGATCCCTGA+AGG | - | chr1.1:59670677-59670696 | None:intergenic | 45.0% | |
| CCAAAGGGTTATAAAGCCGT+CGG | + | chr1.1:59669781-59669800 | MS.gene52616:CDS | 45.0% | |
| CCAAGACAGGAAAATCCATC+TGG | - | chr1.1:59669574-59669593 | None:intergenic | 45.0% | |
| CCATCATTATATCCTCCACC+AGG | - | chr1.1:59670255-59670274 | None:intergenic | 45.0% | |
| CCTGGTGGAGGATATAATGA+TGG | + | chr1.1:59670252-59670271 | MS.gene52616:CDS | 45.0% | |
| CTTCAGGGATCATCCAAACT+TGG | + | chr1.1:59670675-59670694 | MS.gene52616:CDS | 45.0% | |
| GAAGGAAGAGAAAAGGGAAG+TGG | - | chr1.1:59668897-59668916 | None:intergenic | 45.0% | |
| GAAGGGAAACATAGAGAGTG+CGG | + | chr1.1:59670326-59670345 | MS.gene52616:CDS | 45.0% | |
| GACTCCATCACCAAGATACT+CGG | - | chr1.1:59670775-59670794 | None:intergenic | 45.0% | |
| GCGAACTCCTATTCCAAGTT+TGG | - | chr1.1:59670691-59670710 | None:intergenic | 45.0% | |
| GTATACTGCGGGTAATGCAA+AGG | + | chr1.1:59670197-59670216 | MS.gene52616:CDS | 45.0% | |
| GTCCAAAGGAGAAGGACAAT+TGG | + | chr1.1:59670970-59670989 | MS.gene52616:CDS | 45.0% | |
| TCTGTCGGAACATTCTTCTG+TGG | + | chr1.1:59669982-59670001 | MS.gene52616:CDS | 45.0% | |
| TGAGCACAGTGGAGGTAAAT+GGG | + | chr1.1:59670557-59670576 | MS.gene52616:CDS | 45.0% | |
| TTCCTTCACCTCTTCCACAA+TGG | + | chr1.1:59668910-59668929 | MS.gene52616:CDS | 45.0% | |
| TTGTGAGTGATCTACTCAGG+TGG | + | chr1.1:59669415-59669434 | MS.gene52616:intron | 45.0% | |
| TTGTTCCGAGTCAGAATCCT+TGG | + | chr1.1:59669675-59669694 | MS.gene52616:CDS | 45.0% | |
| TTTCTCGCATCTTCATCGGT+AGG | - | chr1.1:59670297-59670316 | None:intergenic | 45.0% | |
| ! | ACGGCTTTATAACCCTTTGG+AGG | - | chr1.1:59669781-59669800 | None:intergenic | 45.0% |
| ! | AGACCTTTGGAGATTCCAGA+TGG | + | chr1.1:59669556-59669575 | MS.gene52616:CDS | 45.0% |
| ! | CGGCTTTATAACCCTTTGGA+GGG | - | chr1.1:59669780-59669799 | None:intergenic | 45.0% |
| ! | CTAGCTAGAGGTGTATCTGT+CGG | + | chr1.1:59669967-59669986 | MS.gene52616:CDS | 45.0% |
| ! | GATAGAGGTATGCTAGCTAG+AGG | + | chr1.1:59669955-59669974 | MS.gene52616:CDS | 45.0% |
| ! | GCTCAATGAGAGCATGAATC+TGG | - | chr1.1:59670092-59670111 | None:intergenic | 45.0% |
| ! | TTTCGGTTCATCTGGATTGG+TGG | - | chr1.1:59669818-59669837 | None:intergenic | 45.0% |
| ! | TTTTTCTCTGAGCACAGTGG+AGG | + | chr1.1:59670549-59670568 | MS.gene52616:CDS | 45.0% |
| !! | CCAGATGGATTTTCCTGTCT+TGG | + | chr1.1:59669571-59669590 | MS.gene52616:CDS | 45.0% |
| ACAAGAACGTGTCCTCGCAA+CGG | - | chr1.1:59669622-59669641 | None:intergenic | 50.0% | |
| AGGGTTGCAGGTCCATTGAA+TGG | - | chr1.1:59670420-59670439 | None:intergenic | 50.0% | |
| CACGGCACAAATTTACCTGG+TGG | + | chr1.1:59670237-59670256 | MS.gene52616:CDS | 50.0% | |
| CATGCAGGGACTTACCTTCA+GGG | + | chr1.1:59670660-59670679 | MS.gene52616:CDS | 50.0% | |
| CATGCTAGCTATCCTCATGC+AGG | + | chr1.1:59670645-59670664 | MS.gene52616:CDS | 50.0% | |
| CATTGAGCATTACGGGCCAA+CGG | + | chr1.1:59670104-59670123 | MS.gene52616:CDS | 50.0% | |
| CCCAAGGGATATTCTTCCAC+CGG | - | chr1.1:59669449-59669468 | None:intergenic | 50.0% | |
| CCGGTGGAAGAATATCCCTT+GGG | + | chr1.1:59669446-59669465 | MS.gene52616:CDS | 50.0% | |
| CGGTGAACATGTCGGTGATT+GGG | + | chr1.1:59670476-59670495 | MS.gene52616:CDS | 50.0% | |
| CTGAGCACAGTGGAGGTAAA+TGG | + | chr1.1:59670556-59670575 | MS.gene52616:CDS | 50.0% | |
| GCTAGCATACCTCTATCGCA+AGG | - | chr1.1:59669952-59669971 | None:intergenic | 50.0% | |
| GGCACAAATTTACCTGGTGG+AGG | + | chr1.1:59670240-59670259 | MS.gene52616:CDS | 50.0% | |
| GGGTTGCAGGTCCATTGAAT+GGG | - | chr1.1:59670419-59670438 | None:intergenic | 50.0% | |
| GGTGGTAACTACTATGCCGA+CGG | - | chr1.1:59669800-59669819 | None:intergenic | 50.0% | |
| GTAAAGGCTCCTCCTAATGC+TGG | - | chr1.1:59670372-59670391 | None:intergenic | 50.0% | |
| GTGGCAGTAGTAACCAAGAC+AGG | - | chr1.1:59669587-59669606 | None:intergenic | 50.0% | |
| TCATGCAGGGACTTACCTTC+AGG | + | chr1.1:59670659-59670678 | MS.gene52616:CDS | 50.0% | |
| TCCTCACCAGAAAGCTCTGT+TGG | - | chr1.1:59670939-59670958 | None:intergenic | 50.0% | |
| TCCTTCTCCTTTGGACCAGT+TGG | - | chr1.1:59670966-59670985 | None:intergenic | 50.0% | |
| TCGGTGAACATGTCGGTGAT+TGG | + | chr1.1:59670475-59670494 | MS.gene52616:CDS | 50.0% | |
| TGAAGGTAAGTCCCTGCATG+AGG | - | chr1.1:59670660-59670679 | None:intergenic | 50.0% | |
| TGAGTGATCTACTCAGGTGG+TGG | + | chr1.1:59669418-59669437 | MS.gene52616:intron | 50.0% | |
| TGGTTGCCTAACCCTCCAAA+GGG | + | chr1.1:59669766-59669785 | MS.gene52616:CDS | 50.0% | |
| TTGGTTGCCTAACCCTCCAA+AGG | + | chr1.1:59669765-59669784 | MS.gene52616:CDS | 50.0% | |
| ! | AACAGAGCTTTCTGGTGAGG+AGG | + | chr1.1:59670938-59670957 | MS.gene52616:CDS | 50.0% |
| ! | ACAGAGCTTTCTGGTGAGGA+GGG | + | chr1.1:59670939-59670958 | MS.gene52616:CDS | 50.0% |
| ! | CCGACGGCTTTATAACCCTT+TGG | - | chr1.1:59669784-59669803 | None:intergenic | 50.0% |
| ! | TCCAACAGAGCTTTCTGGTG+AGG | + | chr1.1:59670935-59670954 | MS.gene52616:CDS | 50.0% |
| !! | TACTCAGGTGGTGGTTTTGC+CGG | + | chr1.1:59669427-59669446 | MS.gene52616:intron | 50.0% |
| AGGACACGTTCTTGTCGCTC+GGG | + | chr1.1:59669627-59669646 | MS.gene52616:CDS | 55.0% | |
| CCTCTTCCACAATGGCCACA+AGG | + | chr1.1:59668918-59668937 | MS.gene52616:CDS | 55.0% | |
| CCTTGTGGCCATTGTGGAAG+AGG | - | chr1.1:59668921-59668940 | None:intergenic | 55.0% | |
| CTTCGCGTGAGCAACTTCAC+CGG | + | chr1.1:59670510-59670529 | MS.gene52616:CDS | 55.0% | |
| GAGGACACGTTCTTGTCGCT+CGG | + | chr1.1:59669626-59669645 | MS.gene52616:CDS | 55.0% | |
| GCAACGGCTGATCATTGGAG+TGG | - | chr1.1:59669606-59669625 | None:intergenic | 55.0% | |
| GCAACTTCACCGGAGAGCTT+TGG | + | chr1.1:59670520-59670539 | MS.gene52616:CDS | 55.0% | |
| GCCAACTGGTCCAAAGGAGA+AGG | + | chr1.1:59670962-59670981 | MS.gene52616:CDS | 55.0% | |
| GCCGGTGGAAGAATATCCCT+TGG | + | chr1.1:59669445-59669464 | MS.gene52616:CDS | 55.0% | |
| GCTGCCGAGTATCTTGGTGA+TGG | + | chr1.1:59670768-59670787 | MS.gene52616:CDS | 55.0% | |
| GGCCATTGTGGAAGAGGTGA+AGG | - | chr1.1:59668915-59668934 | None:intergenic | 55.0% | |
| GGTGAAGTTGCTCACGCGAA+GGG | - | chr1.1:59670511-59670530 | None:intergenic | 55.0% | |
| TCCAATGATCAGCCGTTGCG+AGG | + | chr1.1:59669607-59669626 | MS.gene52616:CDS | 55.0% | |
| TCCTCGCAACGGCTGATCAT+TGG | - | chr1.1:59669611-59669630 | None:intergenic | 55.0% | |
| ! | CAGAGCTTTCTGGTGAGGAG+GGG | + | chr1.1:59670940-59670959 | MS.gene52616:CDS | 55.0% |
| !! | ACATGCCATCATCGGTGTCG+TGG | + | chr1.1:59670151-59670170 | MS.gene52616:CDS | 55.0% |
| CGGTGAAGTTGCTCACGCGA+AGG | - | chr1.1:59670512-59670531 | None:intergenic | 60.0% | |
| !! | TCAGGTGGTGGTTTTGCCGG+TGG | + | chr1.1:59669430-59669449 | MS.gene52616:intron | 60.0% |
| GGAGGGGCCAACTGGTCCAA+AGG | + | chr1.1:59670956-59670975 | MS.gene52616:CDS | 65.0% | |
| TCTGGTGAGGAGGGGCCAAC+TGG | + | chr1.1:59670948-59670967 | MS.gene52616:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 59668837 | 59671013 | 59668837 | ID=MS.gene52616 |
| chr1.1 | mRNA | 59668837 | 59671013 | 59668837 | ID=MS.gene52616.t1;Parent=MS.gene52616 |
| chr1.1 | exon | 59668837 | 59668939 | 59668837 | ID=MS.gene52616.t1.exon1;Parent=MS.gene52616.t1 |
| chr1.1 | CDS | 59668837 | 59668939 | 59668837 | ID=cds.MS.gene52616.t1;Parent=MS.gene52616.t1 |
| chr1.1 | exon | 59669434 | 59671013 | 59669434 | ID=MS.gene52616.t1.exon2;Parent=MS.gene52616.t1 |
| chr1.1 | CDS | 59669434 | 59671013 | 59669434 | ID=cds.MS.gene52616.t1;Parent=MS.gene52616.t1 |
| Gene Sequence |
| Protein sequence |
