AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60881

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60881.t1 MTR_2g062380 94.242 521 30 0 201 721 40 560 0.0 1022
MS.gene60881.t1 MTR_2g062380 43.784 185 59 4 24 168 32 211 8.69e-35 140
MS.gene60881.t1 MTR_2g062370 81.413 538 99 1 185 721 53 590 0.0 921
MS.gene60881.t1 MTR_2g062370 42.784 194 65 3 16 168 53 241 2.87e-35 142
MS.gene60881.t1 MTR_2g062410 79.279 555 108 3 170 721 36 586 0.0 918
MS.gene60881.t1 MTR_2g062410 45.500 200 63 4 10 168 47 241 1.19e-41 160
MS.gene60881.t1 MTR_2g062430 70.364 550 153 2 173 721 13 553 0.0 817
MS.gene60881.t1 MTR_2g062430 49.519 208 59 4 2 168 11 213 6.30e-49 181
MS.gene60881.t1 MTR_4g131710 68.649 555 171 2 170 721 32 586 0.0 794
MS.gene60881.t1 MTR_4g131710 46.667 195 58 4 16 169 47 236 8.47e-44 167
MS.gene60881.t1 MTR_2g067640 53.748 547 222 8 185 721 16 541 0.0 598
MS.gene60881.t1 MTR_2g067640 50.990 202 50 5 11 168 10 206 9.47e-50 183
MS.gene60881.t1 MTR_2g062340 50.000 554 220 10 178 720 9 516 1.21e-176 515
MS.gene60881.t1 MTR_2g062340 76.077 209 10 1 1 169 1 209 1.44e-98 313
MS.gene60881.t1 MTR_1g080370 46.069 547 265 9 191 720 25 558 6.89e-161 476
MS.gene60881.t1 MTR_1g080370 30.928 194 89 2 20 169 23 215 2.14e-22 102
MS.gene60881.t1 MTR_1g080410 46.069 547 265 9 191 720 25 558 6.89e-161 476
MS.gene60881.t1 MTR_1g080410 30.928 194 89 2 20 169 23 215 2.14e-22 102
MS.gene60881.t1 MTR_5g007860 43.455 573 288 10 175 720 42 605 5.74e-156 465
MS.gene60881.t1 MTR_5g007860 30.476 210 90 3 15 169 54 262 1.81e-22 102
MS.gene60881.t1 MTR_4g077620 43.557 551 277 12 191 720 30 567 2.83e-145 436
MS.gene60881.t1 MTR_4g077620 33.175 211 87 5 10 169 19 226 1.50e-24 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60881.t1 AT2G44260 52.095 549 251 5 174 720 14 552 0.0 591
MS.gene60881.t1 AT2G44260 42.640 197 72 2 9 168 18 210 2.26e-41 159
MS.gene60881.t1 AT2G44260 53.640 522 230 5 201 720 71 582 0.0 582
MS.gene60881.t1 AT2G44260 43.333 180 61 2 26 168 65 240 6.85e-37 147
MS.gene60881.t1 AT2G44230 50.814 553 254 7 173 721 4 542 0.0 559
MS.gene60881.t1 AT2G44230 44.792 192 62 4 16 168 16 202 3.56e-39 153
MS.gene60881.t1 AT3G01870 46.000 550 273 8 180 720 49 583 7.23e-169 498
MS.gene60881.t1 AT3G01870 37.563 197 74 6 16 168 54 245 3.74e-26 114
MS.gene60881.t1 AT3G01880 46.055 545 272 8 185 720 58 589 1.44e-165 489
MS.gene60881.t1 AT3G01880 39.594 197 70 6 16 168 58 249 1.68e-28 121
MS.gene60881.t1 AT5G18490 44.669 544 270 9 191 721 27 552 1.03e-157 468
MS.gene60881.t1 AT5G18490 30.851 188 87 3 20 169 25 207 2.31e-22 102
MS.gene60881.t1 AT3G04350 43.739 551 278 9 191 721 28 566 8.99e-153 456
MS.gene60881.t1 AT3G04350 29.016 193 90 3 20 166 26 217 1.68e-17 87.0
MS.gene60881.t1 AT3G04350 43.438 541 274 9 201 721 16 544 1.18e-147 442
MS.gene60881.t1 AT5G43950 43.169 549 289 9 188 720 23 564 2.31e-146 439
MS.gene60881.t1 AT5G43950 30.769 208 98 4 7 169 10 216 7.71e-21 97.4
MS.gene60881.t1 AT1G04090 42.397 559 285 13 188 720 23 570 6.64e-145 436

Find 165 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACTCTCCTTTGTATATT+TGG 0.127143 2.3:-32037135 MS.gene60881:CDS
ACTTACCTTCCTCGGTTAAT+TGG 0.215430 2.3:-32036745 MS.gene60881:CDS
GCTTTAATTCCTCTATTTAT+TGG 0.227005 2.3:+32036944 None:intergenic
TTGGTTTCTGCAGAATATTT+AGG 0.246737 2.3:-32036116 MS.gene60881:CDS
TTCCTGTTTCACAACCTTCT+TGG 0.254181 2.3:-32037558 MS.gene60881:CDS
CTTGTAGCAAAGGATATTTC+AGG 0.255851 2.3:-32037232 MS.gene60881:CDS
AGAGTTTATAGATATTAAAT+TGG 0.261098 2.3:-32036447 MS.gene60881:CDS
TCCTCTCCCAAGGCTTCTTT+TGG 0.261151 2.3:+32035945 None:intergenic
TTTCAACATTCAACAAAGTT+TGG 0.264610 2.3:-32038888 MS.gene60881:CDS
CTCAACACAATGCTGGTAAA+TGG 0.273775 2.3:-32036337 MS.gene60881:CDS
CATCAACATTCAGCAAAGTT+TGG 0.275579 2.3:-32037381 MS.gene60881:CDS
AGGTAGAAATGTTATGGATA+TGG 0.277907 2.3:-32036150 MS.gene60881:CDS
GTGAATCGTCTACATTGATT+TGG 0.279504 2.3:-32037000 MS.gene60881:CDS
GTCCAAAGGAAAAGAGTAAT+TGG 0.284986 2.3:-32035911 MS.gene60881:CDS
ATTGGGAGCATGTGACATTA+AGG 0.285039 2.3:-32036400 MS.gene60881:CDS
TGGTTTCTGCAGAATATTTA+GGG 0.297210 2.3:-32036115 MS.gene60881:CDS
GGCACCTTTGTTGCTCAAAT+TGG 0.299661 2.3:-32036905 MS.gene60881:CDS
TGAATCGTCTACATTGATTT+GGG 0.313780 2.3:-32036999 MS.gene60881:CDS
AACTCTACTTTAGCCCTTCC+AGG 0.316265 2.3:+32036464 None:intergenic
ATCAACATTCAGCAAAGTTT+GGG 0.318101 2.3:-32037380 MS.gene60881:CDS
GAGTTTATAGATATTAAATT+GGG 0.325734 2.3:-32036446 MS.gene60881:CDS
CTTCATGGTTGGGTTCTTGT+AGG 0.329796 2.3:-32038754 MS.gene60881:intron
GATGACTGTGTTTGCAAAAC+TGG 0.332977 2.3:+32037432 None:intergenic
GTAACTTCGATGGTCAATTA+TGG 0.344009 2.3:-32036373 MS.gene60881:CDS
GGCCAAGAAGGTTGTGAAAC+AGG 0.353292 2.3:+32037556 None:intergenic
CATGCTGGCATTAATCTACT+AGG 0.355903 2.3:-32036209 MS.gene60881:CDS
GGAAGGTTTATCTTGTGTTT+TGG 0.358980 2.3:+32037066 None:intergenic
ATCATCTGGTCCACCTTCAT+TGG 0.362805 2.3:+32038861 None:intergenic
GAACCAACAGGACTGACTTA+TGG 0.368553 2.3:-32037313 MS.gene60881:CDS
GCTTCAACACCTCTCTTGAT+TGG 0.379642 2.3:+32038439 None:intergenic
CCAAACAACAAACCTCTTCA+TGG 0.383735 2.3:-32038769 MS.gene60881:CDS
TAATAAAGGTAGAAATGTTA+TGG 0.389081 2.3:-32036156 MS.gene60881:CDS
CCATGAAGAGGTTTGTTGTT+TGG 0.390861 2.3:+32038769 None:intergenic
CTAACACTGATGGTTCCTAT+TGG 0.400945 2.3:-32036631 MS.gene60881:CDS
ATTGTTTATGCTTCTTTGCA+TGG 0.404938 2.3:-32036248 MS.gene60881:CDS
GGGCGCCTACGACGGTGGAC+CGG 0.407167 2.3:-32037359 MS.gene60881:CDS
GCAAACACAGTCATCAATCT+AGG 0.408168 2.3:-32037424 MS.gene60881:CDS
CAATAGGAACCATCAGTGTT+AGG 0.411818 2.3:+32036632 None:intergenic
AATACAAGTCAATGAAGCTT+TGG 0.413133 2.3:-32038501 MS.gene60881:CDS
TTCAAACATGAAATTGATGA+AGG 0.414574 2.3:+32036869 None:intergenic
AATGTGGCTAAGGCGTTGCC+TGG 0.415179 2.3:-32036008 MS.gene60881:CDS
GCAAGAGATGATACTAATAA+AGG 0.425735 2.3:-32036170 MS.gene60881:CDS
TCTGACACACATGACTTTGT+TGG 0.429774 2.3:+32037042 None:intergenic
CCTGTTCCCATAGCACAAAA+TGG 0.434660 2.3:-32036674 MS.gene60881:CDS
CAACAAACCTCTTCATGGTT+GGG 0.434795 2.3:-32038764 MS.gene60881:CDS
ATTGTAACTCCAAGATCATC+TGG 0.435507 2.3:+32038847 None:intergenic
GGTAGAAATGTTATGGATAT+GGG 0.435541 2.3:-32036149 MS.gene60881:CDS
GGATATGGGAAAATATGTAT+TGG 0.435630 2.3:-32036135 MS.gene60881:CDS
GCAAGTGGCATCATTGATCT+TGG 0.444135 2.3:-32038934 MS.gene60881:CDS
TGTCTAGTGAAGGCTTCTCT+TGG 0.444407 2.3:+32038566 None:intergenic
CTTCATCAGAATGTAAGTAT+AGG 0.445447 2.3:+32036771 None:intergenic
GTCTAGTGAAGGCTTCTCTT+GGG 0.445960 2.3:+32038567 None:intergenic
GATATTAAATTGGGGAAAGC+AGG 0.451140 2.3:-32036437 MS.gene60881:CDS
ACTTATGGATACTCTATGTT+AGG 0.451687 2.3:-32037298 MS.gene60881:CDS
AAAGGTGCCAACTCGAACAC+CGG 0.452137 2.3:+32036919 None:intergenic
GGCGCCTACGACGGTGGACC+GGG 0.458088 2.3:-32037358 MS.gene60881:CDS
CCTGATGGCTACAAAGTTGT+TGG 0.462939 2.3:-32038607 MS.gene60881:CDS
TGTTGGTCCTTCCTCTCCCA+AGG 0.465771 2.3:+32035935 None:intergenic
TCTTTGTTTGCATTATCAGC+AGG 0.468164 2.3:+32036599 None:intergenic
CTTGTATAGTAATGCTCCGT+TGG 0.470906 2.3:+32036715 None:intergenic
CAGGTGAACATGTTGGTGAT+TGG 0.472172 2.3:-32036418 MS.gene60881:CDS
ACAACAAACCTCTTCATGGT+TGG 0.474915 2.3:-32038765 MS.gene60881:CDS
ATAGGAATGGAGCGTTAACT+TGG 0.477931 2.3:+32036789 None:intergenic
TGCAAAGAAGCATAAACAAT+AGG 0.479629 2.3:+32036251 None:intergenic
GTTTGGGGCGCCTACGACGG+TGG 0.480695 2.3:-32037364 MS.gene60881:CDS
GAAGGTGGACCAGATGATCT+TGG 0.482031 2.3:-32038856 MS.gene60881:CDS
TTGGGAGAGGAAGGACCAAC+AGG 0.483726 2.3:-32035933 MS.gene60881:CDS
ACCTTTGTTGCTCAAATTGG+TGG 0.486604 2.3:-32036902 MS.gene60881:CDS
TGGTAGCCATGAGGTGCTAT+TGG 0.489916 2.3:+32037109 None:intergenic
GAGTTTACCAAAAGAAGCCT+TGG 0.494113 2.3:-32035952 MS.gene60881:CDS
ACTGAAGCGCCTCGATTGCC+CGG 0.495851 2.3:+32037340 None:intergenic
TCCTTTCAATGGACCTGGAA+GGG 0.497466 2.3:-32036477 MS.gene60881:CDS
CCAACAACTTTGTAGCCATC+AGG 0.498774 2.3:+32038607 None:intergenic
ACATTGATTTGGGGATCAAA+CGG 0.501887 2.3:-32036989 MS.gene60881:CDS
GGCATCATTGATCTTGGTGG+TGG 0.502840 2.3:-32038928 MS.gene60881:CDS
GCCCTTCCAGGTCCATTGAA+AGG 0.503272 2.3:+32036476 None:intergenic
CTAAAATAATTCAACCATGC+TGG 0.503659 2.3:+32036077 None:intergenic
GCTTCAGTTTATGAACCAAC+AGG 0.505107 2.3:-32037325 MS.gene60881:CDS
TGGTTATGTTCTTGTAGCAA+AGG 0.506215 2.3:-32037242 MS.gene60881:CDS
ATGATACCTTCTGGCCAAGA+AGG 0.506844 2.3:+32037544 None:intergenic
AGGTGAACATGTTGGTGATT+GGG 0.508342 2.3:-32036417 MS.gene60881:CDS
CCTTTGTTGCTCAAATTGGT+GGG 0.510589 2.3:-32036901 MS.gene60881:CDS
AGCAGGTAGGTCAAGCCAAT+AGG 0.513437 2.3:+32036616 None:intergenic
CACATGACTTTGTTGGTGGA+AGG 0.513673 2.3:+32037049 None:intergenic
AGTTTACCAAAAGAAGCCTT+GGG 0.519013 2.3:-32035951 MS.gene60881:CDS
TTGGGAGCATGTGACATTAA+GGG 0.526297 2.3:-32036399 MS.gene60881:CDS
TCTAGATCAAAGTCAATATG+TGG 0.527060 2.3:+32036044 None:intergenic
TTAAATGAGGTTTGAATGAG+TGG 0.529573 2.3:+32039310 None:intergenic
GAAGAGGTTTGTTGTTTGGT+TGG 0.530138 2.3:+32038773 None:intergenic
AAACCATCTCTTAACTTCCC+AGG 0.534968 2.3:+32035990 None:intergenic
GTGAATGTTCCTCCATACAT+TGG 0.538131 2.3:+32036524 None:intergenic
AAGAGAGGTGTTGAAGCTAA+AGG 0.538834 2.3:-32038433 MS.gene60881:intron
AAAGAGGCTTGCTGTTGGGT+TGG 0.538892 2.3:+32037266 None:intergenic
TGAAGAATACTTACCTTCCT+CGG 0.539422 2.3:-32036753 MS.gene60881:CDS
TCACAACCTTCTTGGCCAGA+AGG 0.539430 2.3:-32037550 MS.gene60881:intron
TCAGAATGTAAGTATAGGAA+TGG 0.541007 2.3:+32036776 None:intergenic
GAACCAACAGGTTTATCTGA+AGG 0.541211 2.3:-32038820 MS.gene60881:CDS
CCATCAGTGTTAGGATCTTG+AGG 0.541983 2.3:+32036641 None:intergenic
TACTTCTCTCAACACAATGC+TGG 0.544284 2.3:-32036344 MS.gene60881:CDS
GTACATGTGAAACCAATGTA+TGG 0.546199 2.3:-32036536 MS.gene60881:CDS
GGAAGGACCAACAGGTCCAA+AGG 0.546506 2.3:-32035925 MS.gene60881:CDS
ACCAAAAGAAGCCTTGGGAG+AGG 0.547085 2.3:-32035946 MS.gene60881:CDS
GACGGTGGACCGGGCAATCG+AGG 0.551257 2.3:-32037349 MS.gene60881:CDS
AAAGAAGCCTTGGGAGAGGA+AGG 0.551794 2.3:-32035942 MS.gene60881:CDS
CCCACCAATTTGAGCAACAA+AGG 0.552223 2.3:+32036901 None:intergenic
AAAGTTTGGACAACCAATGA+AGG 0.552963 2.3:-32038874 MS.gene60881:CDS
ATCCTTTCAATGGACCTGGA+AGG 0.553889 2.3:-32036478 MS.gene60881:CDS
TCAAACATGAAATTGATGAA+GGG 0.554987 2.3:+32036870 None:intergenic
ATTGCCCGGTCCACCGTCGT+AGG 0.557656 2.3:+32037354 None:intergenic
GACACACATGACTTTGTTGG+TGG 0.559758 2.3:+32037045 None:intergenic
CCTCAAGATCCTAACACTGA+TGG 0.563292 2.3:-32036641 MS.gene60881:CDS
AATAGAGGAATTAAAGCTCC+CGG 0.563330 2.3:-32036938 MS.gene60881:CDS
ATTCACTGATATTGCCATGT+GGG 0.565127 2.3:-32036507 MS.gene60881:CDS
TGAATTGCAGAATGTGGCTA+AGG 0.571192 2.3:-32036018 MS.gene60881:CDS
AACAAAGAGAGAGTCAAGAA+AGG 0.571578 2.3:-32036584 MS.gene60881:CDS
TATCCATAAGTCAGTCCTGT+TGG 0.574072 2.3:+32037310 None:intergenic
AAACCTTCAGATAAACCTGT+TGG 0.574604 2.3:+32038817 None:intergenic
ATGCTGGCATTAATCTACTA+GGG 0.576721 2.3:-32036208 MS.gene60881:CDS
ATCAGCAGGAAGCTTAAATG+AGG 0.577159 2.3:+32039297 None:intergenic
CATGCATCATATCCACATGC+TGG 0.577243 2.3:-32036224 MS.gene60881:CDS
GATATTTCAGGAAAGAGTAA+TGG 0.579239 2.3:-32037220 MS.gene60881:CDS
GGAGCATTACTATACAAGAA+AGG 0.581086 2.3:-32036710 MS.gene60881:CDS
AAAGCTCCCGGTGTTCGAGT+TGG 0.582792 2.3:-32036926 MS.gene60881:CDS
CAGTGTTAGGATCTTGAGGA+AGG 0.583165 2.3:+32036645 None:intergenic
GTAGTGAATGTGGCGAGAGC+GGG 0.585956 2.3:+32037591 None:intergenic
ATGTGGCTAAGGCGTTGCCT+GGG 0.589419 2.3:-32036007 MS.gene60881:CDS
GATGTTAGACCAATAAATAG+AGG 0.590723 2.3:-32036953 MS.gene60881:CDS
TTGCCTGGGAAGTTAAGAGA+TGG 0.591065 2.3:-32035993 MS.gene60881:CDS
CTGAAGTTAAAGAGCCAGCA+TGG 0.591737 2.3:-32036091 MS.gene60881:CDS
TTTGGAGAACAGAAAACAAG+AGG 0.597580 2.3:-32038483 MS.gene60881:CDS
TGTTTGCATTATCAGCAGGT+AGG 0.599393 2.3:+32036603 None:intergenic
AGTTTATAGATATTAAATTG+GGG 0.600504 2.3:-32036445 MS.gene60881:CDS
AAAGTTTGGGGCGCCTACGA+CGG 0.602534 2.3:-32037367 MS.gene60881:CDS
CTTGGGAAGTAGTGACAACA+TGG 0.602691 2.3:+32038584 None:intergenic
CCTCATGGCTACCATGCTGT+AGG 0.608416 2.3:-32037100 MS.gene60881:CDS
TGGTTACCAGTAGCACCTGA+TGG 0.610702 2.3:-32038622 MS.gene60881:intron
AAGGAAAAGAGTAATTGGAA+TGG 0.612931 2.3:-32035906 MS.gene60881:CDS
ACAAGAACCCAACCATGAAG+AGG 0.613128 2.3:+32038757 None:intergenic
CAAAACTACTAGCATCACTT+CGG 0.616275 2.3:+32036291 None:intergenic
ATTGAACACTGCATCCGCCA+CGG 0.616955 2.3:-32037164 MS.gene60881:CDS
GAATCGTCTACATTGATTTG+GGG 0.618231 2.3:-32036998 MS.gene60881:CDS
TGGCTACCAATAGCACCTCA+TGG 0.618656 2.3:-32037115 MS.gene60881:CDS
AATACAAGTGAGTAATCAAG+AGG 0.619444 2.3:+32037184 None:intergenic
AGATATTGAATTGCAGAATG+TGG 0.619484 2.3:-32036024 MS.gene60881:CDS
AGTGGCATCATTGATCTTGG+TGG 0.625498 2.3:-32038931 MS.gene60881:CDS
AAGGTGCCAACTCGAACACC+GGG 0.628473 2.3:+32036920 None:intergenic
TCAACATTCAGCAAAGTTTG+GGG 0.632154 2.3:-32037379 MS.gene60881:CDS
GAAGGTGATGGATTTGCAAG+TGG 0.636338 2.3:-32038949 MS.gene60881:intron
GTTTGGACAACCAATGAAGG+TGG 0.636585 2.3:-32038871 MS.gene60881:CDS
AGTAGATTAATGCCAGCATG+TGG 0.637012 2.3:+32036212 None:intergenic
ATTGGTAGCCAAATATACAA+AGG 0.637296 2.3:+32037127 None:intergenic
TGACAACATGGCCTACAGCA+TGG 0.643727 2.3:+32037089 None:intergenic
ACAAGTGAGTAATCAAGAGG+TGG 0.647867 2.3:+32037187 None:intergenic
TGTAGTGAATGTGGCGAGAG+CGG 0.649291 2.3:+32037590 None:intergenic
ACGATTCACATTGCTCTGTG+TGG 0.653711 2.3:+32037014 None:intergenic
GCTTAGATGTGTAGTGAATG+TGG 0.662600 2.3:+32037581 None:intergenic
ATTTGATACATTCATCAGTG+AGG 0.666824 2.3:+32038521 None:intergenic
GATGTTAGACCAATCAAGAG+AGG 0.668053 2.3:-32038448 MS.gene60881:CDS
GGGAAAGCAGGTGAACATGT+TGG 0.668748 2.3:-32036425 MS.gene60881:CDS
TTAAGGGTAAGTAACTTCGA+TGG 0.678056 2.3:-32036383 MS.gene60881:CDS
AGGAGAGTCTTGAGTAACCG+TGG 0.681322 2.3:+32037147 None:intergenic
CATTCACTGATATTGCCATG+TGG 0.686069 2.3:-32036508 MS.gene60881:CDS
CATGTGAAACCAATGTATGG+AGG 0.726903 2.3:-32036533 MS.gene60881:CDS
CCTACAGCATGGTAGCCATG+AGG 0.740121 2.3:+32037100 None:intergenic
AGAGTCTTGAGTAACCGTGG+CGG 0.757224 2.3:+32037150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTAAGTTCATATATT+AGG + chr2.3:32037530-32037549 None:intergenic 10.0%
!! ACCTTAAAATTTATATTCTA+TGG + chr2.3:32037394-32037413 None:intergenic 15.0%
!! AGAGTTTATAGATATTAAAT+TGG - chr2.3:32038795-32038814 MS.gene60881:CDS 15.0%
!! AGTTTATAGATATTAAATTG+GGG - chr2.3:32038797-32038816 MS.gene60881:CDS 15.0%
!! ATATATAGAATAAAGCAAAT+AGG + chr2.3:32036169-32036188 None:intergenic 15.0%
!! GAGTTTATAGATATTAAATT+GGG - chr2.3:32038796-32038815 MS.gene60881:CDS 15.0%
!!! ACAAATTTAAGTAATGATTT+TGG + chr2.3:32037154-32037173 None:intergenic 15.0%
!!! ATGGTTTTGAAAATATTATT+AGG - chr2.3:32039268-32039287 MS.gene60881:intron 15.0%
!!! TCCATAGAATATAAATTTTA+AGG - chr2.3:32037390-32037409 MS.gene60881:CDS 15.0%
!! AGTATTAAATTGCAACATAA+AGG - chr2.3:32037785-32037804 MS.gene60881:intron 20.0%
!! TAATAAAGGTAGAAATGTTA+TGG - chr2.3:32039086-32039105 MS.gene60881:intron 20.0%
!! TGACTAGAATATATTACAAA+TGG + chr2.3:32037746-32037765 None:intergenic 20.0%
!! TTAAATATAATCACATGTGT+TGG + chr2.3:32036060-32036079 None:intergenic 20.0%
!! TTATATTCTATGGAAATCTT+GGG + chr2.3:32037384-32037403 None:intergenic 20.0%
!! TTTATATTCTATGGAAATCT+TGG + chr2.3:32037385-32037404 None:intergenic 20.0%
!!! AATTTTGGGATGATTTTTAT+TGG - chr2.3:32036255-32036274 MS.gene60881:CDS 20.0%
!!! GTATTTTTCAAACAAACAAT+AGG + chr2.3:32036890-32036909 None:intergenic 20.0%
!!! TTTTTTAAAGCTTTGTTTGT+GGG + chr2.3:32036530-32036549 None:intergenic 20.0%
!!! TTTTTTTAAAGCTTTGTTTG+TGG + chr2.3:32036531-32036550 None:intergenic 20.0%
! AAAACCACTTGATTACAAAT+TGG - chr2.3:32036547-32036566 MS.gene60881:CDS 25.0%
! ACATTGCTTATTTAGGAAAT+AGG + chr2.3:32036209-32036228 None:intergenic 25.0%
! ATGCTTAACAAGAGTTTATA+AGG - chr2.3:32037457-32037476 MS.gene60881:intron 25.0%
! ATTAATCTACTAGGGAAAAA+TGG - chr2.3:32039042-32039061 MS.gene60881:intron 25.0%
! GCTTTAATTCCTCTATTTAT+TGG + chr2.3:32038301-32038320 None:intergenic 25.0%
! GTTAACTACATTGCTTATTT+AGG + chr2.3:32036216-32036235 None:intergenic 25.0%
! TATAGATCCTTAGACAAATT+GGG + chr2.3:32037119-32037138 None:intergenic 25.0%
! TCAAACATGAAATTGATGAA+GGG + chr2.3:32038375-32038394 None:intergenic 25.0%
! TTATAGATCCTTAGACAAAT+TGG + chr2.3:32037120-32037139 None:intergenic 25.0%
! TTCAAACATGAAATTGATGA+AGG + chr2.3:32038376-32038395 None:intergenic 25.0%
! TTTCAACATTCAACAAAGTT+TGG - chr2.3:32036354-32036373 MS.gene60881:CDS 25.0%
!! TGGAATGGTTTTTCATAAAT+GGG - chr2.3:32037023-32037042 MS.gene60881:CDS 25.0%
!! TTTCCATGTGAATTTGATTT+GGG + chr2.3:32037434-32037453 None:intergenic 25.0%
!! TTTTCCATGTGAATTTGATT+TGG + chr2.3:32037435-32037454 None:intergenic 25.0%
!!! AGCATGGTTGAATTATTTTA+GGG - chr2.3:32039167-32039186 MS.gene60881:intron 25.0%
!!! ATCATTTTATTTGAAGGTGA+TGG - chr2.3:32036281-32036300 MS.gene60881:CDS 25.0%
!!! GCATCAATTTGTTTTTTACT+AGG + chr2.3:32038427-32038446 None:intergenic 25.0%
!!! GTTTTGATTTTCCAACAAAA+AGG - chr2.3:32038968-32038987 MS.gene60881:intron 25.0%
!!! TGGCTTATCATTTTATTTGA+AGG - chr2.3:32036275-32036294 MS.gene60881:CDS 25.0%
AAGACTCTCCTTTGTATATT+TGG - chr2.3:32038107-32038126 MS.gene60881:intron 30.0%
AAGGAAAAGAGTAATTGGAA+TGG - chr2.3:32039336-32039355 MS.gene60881:CDS 30.0%
AATACAAGTCAATGAAGCTT+TGG - chr2.3:32036741-32036760 MS.gene60881:CDS 30.0%
AATACAAGTGAGTAATCAAG+AGG + chr2.3:32038061-32038080 None:intergenic 30.0%
ACAAGAACATAACCAAAAAG+AGG + chr2.3:32037995-32038014 None:intergenic 30.0%
ACTTATGGATACTCTATGTT+AGG - chr2.3:32037944-32037963 MS.gene60881:intron 30.0%
AGATATTGAATTGCAGAATG+TGG - chr2.3:32039218-32039237 MS.gene60881:intron 30.0%
AGGTAGAAATGTTATGGATA+TGG - chr2.3:32039092-32039111 MS.gene60881:intron 30.0%
ATACATGTATTTGCATCCTA+TGG - chr2.3:32036979-32036998 MS.gene60881:CDS 30.0%
ATACTCTACCAAAAAAGAGA+TGG - chr2.3:32037049-32037068 MS.gene60881:CDS 30.0%
ATAGATCCTTAGACAAATTG+GGG + chr2.3:32037118-32037137 None:intergenic 30.0%
ATAGGATGCAAATACATGTA+TGG + chr2.3:32036980-32036999 None:intergenic 30.0%
ATCAACATTCAGCAAAGTTT+GGG - chr2.3:32037862-32037881 MS.gene60881:intron 30.0%
ATCACATAAATGATACCTTC+TGG + chr2.3:32037710-32037729 None:intergenic 30.0%
ATCACATACAAGGCTATATT+TGG - chr2.3:32036600-32036619 MS.gene60881:CDS 30.0%
ATTGTTTATGCTTCTTTGCA+TGG - chr2.3:32038994-32039013 MS.gene60881:intron 30.0%
ATTTGATACATTCATCAGTG+AGG + chr2.3:32036724-32036743 None:intergenic 30.0%
CAAAACAAACATCACATACA+AGG - chr2.3:32036590-32036609 MS.gene60881:CDS 30.0%
CATACCAATTTGTAATCAAG+TGG + chr2.3:32036554-32036573 None:intergenic 30.0%
CCAAATTGAGACATTAATCA+AGG - chr2.3:32036946-32036965 MS.gene60881:CDS 30.0%
CCTTGATTAATGTCTCAATT+TGG + chr2.3:32036949-32036968 None:intergenic 30.0%
CTAAAATAATTCAACCATGC+TGG + chr2.3:32039168-32039187 None:intergenic 30.0%
CTTCATCAGAATGTAAGTAT+AGG + chr2.3:32038474-32038493 None:intergenic 30.0%
GATATTTCAGGAAAGAGTAA+TGG - chr2.3:32038022-32038041 MS.gene60881:intron 30.0%
GATGTTAGACCAATAAATAG+AGG - chr2.3:32038289-32038308 MS.gene60881:intron 30.0%
GCAAGAGATGATACTAATAA+AGG - chr2.3:32039072-32039091 MS.gene60881:intron 30.0%
GGAAGAAAATCTATTAGCAT+TGG + chr2.3:32036912-32036931 None:intergenic 30.0%
GGATATGGGAAAATATGTAT+TGG - chr2.3:32039107-32039126 MS.gene60881:intron 30.0%
GGTAGAAATGTTATGGATAT+GGG - chr2.3:32039093-32039112 MS.gene60881:intron 30.0%
TCAGAATGTAAGTATAGGAA+TGG + chr2.3:32038469-32038488 None:intergenic 30.0%
TCTAGATCAAAGTCAATATG+TGG + chr2.3:32039201-32039220 None:intergenic 30.0%
TCTGCAAACAAAAAAACATG+TGG + chr2.3:32037602-32037621 None:intergenic 30.0%
TGGTTTCTGCAGAATATTTA+GGG - chr2.3:32039127-32039146 MS.gene60881:intron 30.0%
TTAAATGAGGTTTGAATGAG+TGG + chr2.3:32035935-32035954 None:intergenic 30.0%
TTGGTTTCTGCAGAATATTT+AGG - chr2.3:32039126-32039145 MS.gene60881:intron 30.0%
! ATTGGTAGCCAAATATACAA+AGG + chr2.3:32038118-32038137 None:intergenic 30.0%
! CAAAATCGACTTATAAGATG+AGG + chr2.3:32037492-32037511 None:intergenic 30.0%
! CACATAATTTTGTCTAGTGA+AGG + chr2.3:32036689-32036708 None:intergenic 30.0%
! CAGCATGGTTGAATTATTTT+AGG - chr2.3:32039166-32039185 MS.gene60881:intron 30.0%
! GGAATGGTTTTTCATAAATG+GGG - chr2.3:32037024-32037043 MS.gene60881:CDS 30.0%
! GTGGAATGGTTTTTCATAAA+TGG - chr2.3:32037022-32037041 MS.gene60881:CDS 30.0%
! GTTACAATTTTTGAACCAAC+AGG - chr2.3:32036410-32036429 MS.gene60881:CDS 30.0%
! TAAACAATAGGCCTTTTTGT+TGG + chr2.3:32038982-32039001 None:intergenic 30.0%
! TGCAAAGAAGCATAAACAAT+AGG + chr2.3:32038994-32039013 None:intergenic 30.0%
! TTCCAATTACTCTTTTCCTT+TGG + chr2.3:32039336-32039355 None:intergenic 30.0%
!! AATTTGGTGTAAATTAGGCA+TGG + chr2.3:32036933-32036952 None:intergenic 30.0%
!! GCATCTATGAGATTTGTTTT+CGG - chr2.3:32037328-32037347 MS.gene60881:CDS 30.0%
!! GTCTCAATTTGGTGTAAATT+AGG + chr2.3:32036938-32036957 None:intergenic 30.0%
!! TGAATCGTCTACATTGATTT+GGG - chr2.3:32038243-32038262 MS.gene60881:intron 30.0%
!! TTCCATGTGAATTTGATTTG+GGG + chr2.3:32037433-32037452 None:intergenic 30.0%
!!! GTTAATTGGTTTTTCTCCAA+CGG - chr2.3:32038511-32038530 MS.gene60881:CDS 30.0%
!!! GTTGAATTATTTTAGGGAGT+GGG - chr2.3:32039173-32039192 MS.gene60881:intron 30.0%
!!! TCTGAAGGTTTCTTTGTTTT+AGG - chr2.3:32036437-32036456 MS.gene60881:CDS 30.0%
!!! TGGGTTTTTTATCCTTTCAA+TGG - chr2.3:32038754-32038773 MS.gene60881:intron 30.0%
!!! TTGAATTATTTTAGGGAGTG+GGG - chr2.3:32039174-32039193 MS.gene60881:intron 30.0%
AAAAACCAATTAACCGAGGA+AGG + chr2.3:32038505-32038524 None:intergenic 35.0%
AAAAACCATTCCACAGAAGA+TGG + chr2.3:32037016-32037035 None:intergenic 35.0%
AAACCTTCAGATAAACCTGT+TGG + chr2.3:32036428-32036447 None:intergenic 35.0%
AAAGTTTGGACAACCAATGA+AGG - chr2.3:32036368-32036387 MS.gene60881:CDS 35.0%
AACAAAGAGAGAGTCAAGAA+AGG - chr2.3:32038658-32038677 MS.gene60881:intron 35.0%
AATAGAGGAATTAAAGCTCC+CGG - chr2.3:32038304-32038323 MS.gene60881:intron 35.0%
AGTTTACCAAAAGAAGCCTT+GGG - chr2.3:32039291-32039310 MS.gene60881:CDS 35.0%
ATCTTGTTGCAGTGTTCATT+CGG + chr2.3:32037213-32037232 None:intergenic 35.0%
ATGCTGGCATTAATCTACTA+GGG - chr2.3:32039034-32039053 MS.gene60881:intron 35.0%
ATTCACTGATATTGCCATGT+GGG - chr2.3:32038735-32038754 MS.gene60881:intron 35.0%
ATTGTAACTCCAAGATCATC+TGG + chr2.3:32036398-32036417 None:intergenic 35.0%
CAAAACTACTAGCATCACTT+CGG + chr2.3:32038954-32038973 None:intergenic 35.0%
CATCAACATTCAGCAAAGTT+TGG - chr2.3:32037861-32037880 MS.gene60881:intron 35.0%
CTTGTAGCAAAGGATATTTC+AGG - chr2.3:32038010-32038029 MS.gene60881:intron 35.0%
GAAAGGATAAAAAACCCACA+TGG + chr2.3:32038752-32038771 None:intergenic 35.0%
GATATTAAATTGGGGAAAGC+AGG - chr2.3:32038805-32038824 MS.gene60881:CDS 35.0%
GCAAATAGGTGTAGAAATCT+AGG + chr2.3:32036155-32036174 None:intergenic 35.0%
GTAACTTCGATGGTCAATTA+TGG - chr2.3:32038869-32038888 MS.gene60881:CDS 35.0%
GTACATGTGAAACCAATGTA+TGG - chr2.3:32038706-32038725 MS.gene60881:intron 35.0%
GTCCAAAGGAAAAGAGTAAT+TGG - chr2.3:32039331-32039350 MS.gene60881:CDS 35.0%
TACACTATGTGTTCATGCAA+GGG + chr2.3:32037570-32037589 None:intergenic 35.0%
TACCCCAAATCAAATTCACA+TGG - chr2.3:32037428-32037447 MS.gene60881:CDS 35.0%
TAGGAAATAGGTATATCAGC+AGG + chr2.3:32036197-32036216 None:intergenic 35.0%
TCAACATTCAGCAAAGTTTG+GGG - chr2.3:32037863-32037882 MS.gene60881:intron 35.0%
TGAAGAATACTTACCTTCCT+CGG - chr2.3:32038489-32038508 MS.gene60881:CDS 35.0%
TGGTTATGTTCTTGTAGCAA+AGG - chr2.3:32038000-32038019 MS.gene60881:intron 35.0%
TTAAGGGTAAGTAACTTCGA+TGG - chr2.3:32038859-32038878 MS.gene60881:CDS 35.0%
TTACACTATGTGTTCATGCA+AGG + chr2.3:32037571-32037590 None:intergenic 35.0%
TTTGGAGAACAGAAAACAAG+AGG - chr2.3:32036759-32036778 MS.gene60881:CDS 35.0%
! GATATACCAGTTTTTCCAAC+AGG - chr2.3:32035965-32035984 MS.gene60881:CDS 35.0%
! GGAAGGTTTATCTTGTGTTT+TGG + chr2.3:32038179-32038198 None:intergenic 35.0%
! GGAGCATTACTATACAAGAA+AGG - chr2.3:32038532-32038551 MS.gene60881:CDS 35.0%
! GTGAATCGTCTACATTGATT+TGG - chr2.3:32038242-32038261 MS.gene60881:intron 35.0%
! TCTTTGTTTGCATTATCAGC+AGG + chr2.3:32038646-32038665 None:intergenic 35.0%
! TTAGCACCATTTTGTGCTAT+GGG + chr2.3:32038577-32038596 None:intergenic 35.0%
! TTTTATCCTTTCAATGGACC+TGG - chr2.3:32038760-32038779 MS.gene60881:CDS 35.0%
!! ACATTGATTTGGGGATCAAA+CGG - chr2.3:32038253-32038272 MS.gene60881:intron 35.0%
!! GAAGCTAAAGGTGTTTATGT+AGG - chr2.3:32036821-32036840 MS.gene60881:CDS 35.0%
!! GAATCGTCTACATTGATTTG+GGG - chr2.3:32038244-32038263 MS.gene60881:intron 35.0%
!! GAGTGGACTTTTCTTTTTCT+TGG + chr2.3:32035918-32035937 None:intergenic 35.0%
!!! GGTTGAATTATTTTAGGGAG+TGG - chr2.3:32039172-32039191 MS.gene60881:intron 35.0%
!!! TAACGACACCATCTCTTTTT+TGG + chr2.3:32037060-32037079 None:intergenic 35.0%
AAACCATCTCTTAACTTCCC+AGG + chr2.3:32039255-32039274 None:intergenic 40.0%
AACCTTCCCCAATTTGTCTA+AGG - chr2.3:32037109-32037128 MS.gene60881:CDS 40.0%
ACAACAAACCTCTTCATGGT+TGG - chr2.3:32036477-32036496 MS.gene60881:CDS 40.0%
ACAAGTGAGTAATCAAGAGG+TGG + chr2.3:32038058-32038077 None:intergenic 40.0%
ACACTATGTGTTCATGCAAG+GGG + chr2.3:32037569-32037588 None:intergenic 40.0%
ACCTTTGTTGCTCAAATTGG+TGG - chr2.3:32038340-32038359 MS.gene60881:intron 40.0%
ACTTACCTTCCTCGGTTAAT+TGG - chr2.3:32038497-32038516 MS.gene60881:CDS 40.0%
AGTAGATTAATGCCAGCATG+TGG + chr2.3:32039033-32039052 None:intergenic 40.0%
ATCAGCAGGAAGCTTAAATG+AGG + chr2.3:32035948-32035967 None:intergenic 40.0%
ATCATGTGACTCATACCTGT+TGG + chr2.3:32035983-32036002 None:intergenic 40.0%
ATCCTTAGACAAATTGGGGA+AGG + chr2.3:32037114-32037133 None:intergenic 40.0%
CAACAAACCTCTTCATGGTT+GGG - chr2.3:32036478-32036497 MS.gene60881:CDS 40.0%
CAATAGGAACCATCAGTGTT+AGG + chr2.3:32038613-32038632 None:intergenic 40.0%
CATGCTGGCATTAATCTACT+AGG - chr2.3:32039033-32039052 MS.gene60881:intron 40.0%
CATGTGAAACCAATGTATGG+AGG - chr2.3:32038709-32038728 MS.gene60881:intron 40.0%
CATTCACTGATATTGCCATG+TGG - chr2.3:32038734-32038753 MS.gene60881:intron 40.0%
CCAAACAACAAACCTCTTCA+TGG - chr2.3:32036473-32036492 MS.gene60881:CDS 40.0%
CCTTTGTTGCTCAAATTGGT+GGG - chr2.3:32038341-32038360 MS.gene60881:intron 40.0%
CTAACACTGATGGTTCCTAT+TGG - chr2.3:32038611-32038630 MS.gene60881:CDS 40.0%
CTACTAGGGAAAAATGGAGT+AGG - chr2.3:32039048-32039067 MS.gene60881:intron 40.0%
CTCAACACAATGCTGGTAAA+TGG - chr2.3:32038905-32038924 MS.gene60881:CDS 40.0%
CTCATACCTGTTGGAAAAAC+TGG + chr2.3:32035974-32035993 None:intergenic 40.0%
CTTGTATAGTAATGCTCCGT+TGG + chr2.3:32038530-32038549 None:intergenic 40.0%
GAACCAACAGGTTTATCTGA+AGG - chr2.3:32036422-32036441 MS.gene60881:CDS 40.0%
GAGTTTACCAAAAGAAGCCT+TGG - chr2.3:32039290-32039309 MS.gene60881:CDS 40.0%
GATGACTGTGTTTGCAAAAC+TGG + chr2.3:32037813-32037832 None:intergenic 40.0%
GATGTTAGACCAATCAAGAG+AGG - chr2.3:32036794-32036813 MS.gene60881:CDS 40.0%
GCAAACACAGTCATCAATCT+AGG - chr2.3:32037818-32037837 MS.gene60881:intron 40.0%
GCTTAGATGTGTAGTGAATG+TGG + chr2.3:32037664-32037683 None:intergenic 40.0%
GCTTCAGTTTATGAACCAAC+AGG - chr2.3:32037917-32037936 MS.gene60881:intron 40.0%
GGAAAAACTGGTATATCAGC+AGG + chr2.3:32035962-32035981 None:intergenic 40.0%
GGACATGACACTAACACATT+GGG + chr2.3:32036113-32036132 None:intergenic 40.0%
GGAGAAAAACCAATTAACCG+AGG + chr2.3:32038509-32038528 None:intergenic 40.0%
GTGAATGTTCCTCCATACAT+TGG + chr2.3:32038721-32038740 None:intergenic 40.0%
TAAGTACCTTCCATCTTCTG+TGG - chr2.3:32037003-32037022 MS.gene60881:CDS 40.0%
TACTTCTCTCAACACAATGC+TGG - chr2.3:32038898-32038917 MS.gene60881:CDS 40.0%
TATCCATAAGTCAGTCCTGT+TGG + chr2.3:32037935-32037954 None:intergenic 40.0%
TCTGACACACATGACTTTGT+TGG + chr2.3:32038203-32038222 None:intergenic 40.0%
TGAATTGCAGAATGTGGCTA+AGG - chr2.3:32039224-32039243 MS.gene60881:intron 40.0%
TGTTTGCATTATCAGCAGGT+AGG + chr2.3:32038642-32038661 None:intergenic 40.0%
TTCCTGTTTCACAACCTTCT+TGG - chr2.3:32037684-32037703 MS.gene60881:intron 40.0%
TTTGTCGTCTAAGTGAGAGT+CGG + chr2.3:32037276-32037295 None:intergenic 40.0%
! ATAGGAATGGAGCGTTAACT+TGG + chr2.3:32038456-32038475 None:intergenic 40.0%
! ATTGGGAGCATGTGACATTA+AGG - chr2.3:32038842-32038861 MS.gene60881:CDS 40.0%
! GTTAGCACCATTTTGTGCTA+TGG + chr2.3:32038578-32038597 None:intergenic 40.0%
! TGTTGTTCGTTTTCTTGCTG+TGG + chr2.3:32037250-32037269 None:intergenic 40.0%
! TTGGGAGCATGTGACATTAA+GGG - chr2.3:32038843-32038862 MS.gene60881:CDS 40.0%
! TTTTCCTTCCACATTGAGCA+AGG + chr2.3:32036853-32036872 None:intergenic 40.0%
!! AAGAGAGGTGTTGAAGCTAA+AGG - chr2.3:32036809-32036828 MS.gene60881:CDS 40.0%
!! AGGTGAACATGTTGGTGATT+GGG - chr2.3:32038825-32038844 MS.gene60881:CDS 40.0%
!! CCATGAAGAGGTTTGTTGTT+TGG + chr2.3:32036476-32036495 None:intergenic 40.0%
!! GAAGAGGTTTGTTGTTTGGT+TGG + chr2.3:32036472-32036491 None:intergenic 40.0%
!! GATGGAAGGTACTTATCCAT+AGG + chr2.3:32036998-32037017 None:intergenic 40.0%
!! TGAGATTTGTTTTCGGCTTC+TGG - chr2.3:32037335-32037354 MS.gene60881:CDS 40.0%
!! TTTGATCCCGTTGGTTCAAT+TGG + chr2.3:32037091-32037110 None:intergenic 40.0%
!!! CTTGTGTTTTGGTGACAACA+TGG + chr2.3:32038168-32038187 None:intergenic 40.0%
AACTCTACTTTAGCCCTTCC+AGG + chr2.3:32038781-32038800 None:intergenic 45.0%
ACAAGAACCCAACCATGAAG+AGG + chr2.3:32036488-32036507 None:intergenic 45.0%
ACCATTCCACAGAAGATGGA+AGG + chr2.3:32037012-32037031 None:intergenic 45.0%
ACCTTCCATCTTCTGTGGAA+TGG - chr2.3:32037008-32037027 MS.gene60881:CDS 45.0%
ACGATTCACATTGCTCTGTG+TGG + chr2.3:32038231-32038250 None:intergenic 45.0%
AGTGGCATCATTGATCTTGG+TGG - chr2.3:32036311-32036330 MS.gene60881:CDS 45.0%
ATCATCTGGTCCACCTTCAT+TGG + chr2.3:32036384-32036403 None:intergenic 45.0%
ATCCTTTCAATGGACCTGGA+AGG - chr2.3:32038764-32038783 MS.gene60881:CDS 45.0%
ATGATACCTTCTGGCCAAGA+AGG + chr2.3:32037701-32037720 None:intergenic 45.0%
CAGTGTTAGGATCTTGAGGA+AGG + chr2.3:32038600-32038619 None:intergenic 45.0%
CATGCATCATATCCACATGC+TGG - chr2.3:32039018-32039037 MS.gene60881:intron 45.0%
CCAACAACTTTGTAGCCATC+AGG + chr2.3:32036638-32036657 None:intergenic 45.0%
CCATCAGTGTTAGGATCTTG+AGG + chr2.3:32038604-32038623 None:intergenic 45.0%
CCCACCAATTTGAGCAACAA+AGG + chr2.3:32038344-32038363 None:intergenic 45.0%
CCTCAAGATCCTAACACTGA+TGG - chr2.3:32038601-32038620 MS.gene60881:CDS 45.0%
CCTGATGGCTACAAAGTTGT+TGG - chr2.3:32036635-32036654 MS.gene60881:CDS 45.0%
CCTGTTCCCATAGCACAAAA+TGG - chr2.3:32038568-32038587 MS.gene60881:CDS 45.0%
CGGACATGACACTAACACAT+TGG + chr2.3:32036114-32036133 None:intergenic 45.0%
CTGAAGTTAAAGAGCCAGCA+TGG - chr2.3:32039151-32039170 MS.gene60881:intron 45.0%
CTTCATGGTTGGGTTCTTGT+AGG - chr2.3:32036488-32036507 MS.gene60881:CDS 45.0%
CTTGGGAAGTAGTGACAACA+TGG + chr2.3:32036661-32036680 None:intergenic 45.0%
GACACACATGACTTTGTTGG+TGG + chr2.3:32038200-32038219 None:intergenic 45.0%
GCAAGTGGCATCATTGATCT+TGG - chr2.3:32036308-32036327 MS.gene60881:CDS 45.0%
GCTTCAACACCTCTCTTGAT+TGG + chr2.3:32036806-32036825 None:intergenic 45.0%
GGAACCATTGACACCAACAT+CGG + chr2.3:32036134-32036153 None:intergenic 45.0%
GGCACCTTTGTTGCTCAAAT+TGG - chr2.3:32038337-32038356 MS.gene60881:intron 45.0%
GTCTAGTGAAGGCTTCTCTT+GGG + chr2.3:32036678-32036697 None:intergenic 45.0%
GTGTTCATGCAAGGGGAATA+AGG + chr2.3:32037562-32037581 None:intergenic 45.0%
GTTAGTGTCATGTCCGATGT+TGG - chr2.3:32036118-32036137 MS.gene60881:CDS 45.0%
GTTGCAGTGTTCATTCGGTT+TGG + chr2.3:32037208-32037227 None:intergenic 45.0%
GTTTGGACAACCAATGAAGG+TGG - chr2.3:32036371-32036390 MS.gene60881:CDS 45.0%
TCCTTTCAATGGACCTGGAA+GGG - chr2.3:32038765-32038784 MS.gene60881:CDS 45.0%
TGCGAGTCCAATTGAACCAA+CGG - chr2.3:32037081-32037100 MS.gene60881:CDS 45.0%
TGTCTAGTGAAGGCTTCTCT+TGG + chr2.3:32036679-32036698 None:intergenic 45.0%
TTGCCTGGGAAGTTAAGAGA+TGG - chr2.3:32039249-32039268 MS.gene60881:intron 45.0%
! ACACGTTCAGTCTGAAGTGT+TGG + chr2.3:32036022-32036041 None:intergenic 45.0%
! CACATGACTTTGTTGGTGGA+AGG + chr2.3:32038196-32038215 None:intergenic 45.0%
! CCATTTTGTGCTATGGGAAC+AGG + chr2.3:32038571-32038590 None:intergenic 45.0%
! CTCTTTTCCTTTGGACCTGT+TGG + chr2.3:32039327-32039346 None:intergenic 45.0%
! GAACCAACAGGACTGACTTA+TGG - chr2.3:32037929-32037948 MS.gene60881:intron 45.0%
!! ACCAAAAAGAGGCTTGCTGT+TGG + chr2.3:32037984-32038003 None:intergenic 45.0%
!! ATGTCCGATGTTGGTGTCAA+TGG - chr2.3:32036127-32036146 MS.gene60881:CDS 45.0%
!! CAGGTGAACATGTTGGTGAT+TGG - chr2.3:32038824-32038843 MS.gene60881:CDS 45.0%
!! CCAAAAAGAGGCTTGCTGTT+GGG + chr2.3:32037983-32038002 None:intergenic 45.0%
!! GAAGGTGATGGATTTGCAAG+TGG - chr2.3:32036293-32036312 MS.gene60881:CDS 45.0%
!!! ATTTATTTTTTTTGAATTTT+GGG - chr2.3:32036241-32036260 MS.gene60881:CDS 5.0%
!!! TATTTATTTTTTTTGAATTT+TGG - chr2.3:32036240-32036259 MS.gene60881:CDS 5.0%
AAAGAAGCCTTGGGAGAGGA+AGG - chr2.3:32039300-32039319 MS.gene60881:CDS 50.0%
ACCAAAAGAAGCCTTGGGAG+AGG - chr2.3:32039296-32039315 MS.gene60881:CDS 50.0%
AGAGTCTTGAGTAACCGTGG+CGG + chr2.3:32038095-32038114 None:intergenic 50.0%
AGCAGGTAGGTCAAGCCAAT+AGG + chr2.3:32038629-32038648 None:intergenic 50.0%
AGGAGAGTCTTGAGTAACCG+TGG + chr2.3:32038098-32038117 None:intergenic 50.0%
ATTGAACACTGCATCCGCCA+CGG - chr2.3:32038078-32038097 MS.gene60881:intron 50.0%
CCTTCCACATTGAGCAAGGA+AGG + chr2.3:32036849-32036868 None:intergenic 50.0%
CCTTCCTTGCTCAATGTGGA+AGG - chr2.3:32036846-32036865 MS.gene60881:CDS 50.0%
GAAGGTGGACCAGATGATCT+TGG - chr2.3:32036386-32036405 MS.gene60881:CDS 50.0%
GCGAGTCCAATTGAACCAAC+GGG - chr2.3:32037082-32037101 MS.gene60881:CDS 50.0%
GGAACCTTCCTTGCTCAATG+TGG - chr2.3:32036842-32036861 MS.gene60881:CDS 50.0%
GGCATCATTGATCTTGGTGG+TGG - chr2.3:32036314-32036333 MS.gene60881:CDS 50.0%
GGCCAAGAAGGTTGTGAAAC+AGG + chr2.3:32037689-32037708 None:intergenic 50.0%
GGGAAAGCAGGTGAACATGT+TGG - chr2.3:32038817-32038836 MS.gene60881:CDS 50.0%
TCACAACCTTCTTGGCCAGA+AGG - chr2.3:32037692-32037711 MS.gene60881:intron 50.0%
TGACAACATGGCCTACAGCA+TGG + chr2.3:32038156-32038175 None:intergenic 50.0%
TGGCTACCAATAGCACCTCA+TGG - chr2.3:32038127-32038146 MS.gene60881:intron 50.0%
TGGTTACCAGTAGCACCTGA+TGG - chr2.3:32036620-32036639 MS.gene60881:CDS 50.0%
TGTAGTGAATGTGGCGAGAG+CGG + chr2.3:32037655-32037674 None:intergenic 50.0%
! CCCAACAGCAAGCCTCTTTT+TGG - chr2.3:32037980-32037999 MS.gene60881:intron 50.0%
! TCCTCTCCCAAGGCTTCTTT+TGG + chr2.3:32039300-32039319 None:intergenic 50.0%
! TGGTAGCCATGAGGTGCTAT+TGG + chr2.3:32038136-32038155 None:intergenic 50.0%
! TTGTAGCCATCAGGTGCTAC+TGG + chr2.3:32036629-32036648 None:intergenic 50.0%
!! AAAGAGGCTTGCTGTTGGGT+TGG + chr2.3:32037979-32037998 None:intergenic 50.0%
!! AAAGGTGCCAACTCGAACAC+CGG + chr2.3:32038326-32038345 None:intergenic 50.0%
AAAGCTCCCGGTGTTCGAGT+TGG - chr2.3:32038316-32038335 MS.gene60881:intron 55.0%
CCTACAGCATGGTAGCCATG+AGG + chr2.3:32038145-32038164 None:intergenic 55.0%
CCTCATGGCTACCATGCTGT+AGG - chr2.3:32038142-32038161 MS.gene60881:intron 55.0%
GCCCTTCCAGGTCCATTGAA+AGG + chr2.3:32038769-32038788 None:intergenic 55.0%
GGAAGGACCAACAGGTCCAA+AGG - chr2.3:32039317-32039336 MS.gene60881:CDS 55.0%
GTAGTGAATGTGGCGAGAGC+GGG + chr2.3:32037654-32037673 None:intergenic 55.0%
TGGGGAAGGTTTGATCCCGT+TGG + chr2.3:32037100-32037119 None:intergenic 55.0%
TGTTGGTCCTTCCTCTCCCA+AGG + chr2.3:32039310-32039329 None:intergenic 55.0%
TTGGGAGAGGAAGGACCAAC+AGG - chr2.3:32039309-32039328 MS.gene60881:CDS 55.0%
! AAAGTTTGGGGCGCCTACGA+CGG - chr2.3:32037875-32037894 MS.gene60881:intron 55.0%
! AAGGTGCCAACTCGAACACC+GGG + chr2.3:32038325-32038344 None:intergenic 55.0%
!! AATGTGGCTAAGGCGTTGCC+TGG - chr2.3:32039234-32039253 MS.gene60881:intron 55.0%
!! ATGTGGCTAAGGCGTTGCCT+GGG - chr2.3:32039235-32039254 MS.gene60881:intron 55.0%
! ACTGAAGCGCCTCGATTGCC+CGG + chr2.3:32037905-32037924 None:intergenic 60.0%
ATTGCCCGGTCCACCGTCGT+AGG + chr2.3:32037891-32037910 None:intergenic 65.0%
GACGGTGGACCGGGCAATCG+AGG - chr2.3:32037893-32037912 MS.gene60881:intron 70.0%
! GTTTGGGGCGCCTACGACGG+TGG - chr2.3:32037878-32037897 MS.gene60881:intron 70.0%
GGCGCCTACGACGGTGGACC+GGG - chr2.3:32037884-32037903 MS.gene60881:intron 75.0%
GGGCGCCTACGACGGTGGAC+CGG - chr2.3:32037883-32037902 MS.gene60881:intron 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 32035893 32039371 32035893 ID=MS.gene60881
chr2.3 mRNA 32035893 32039371 32035893 ID=MS.gene60881.t1;Parent=MS.gene60881
chr2.3 exon 32039278 32039371 32039278 ID=MS.gene60881.t1.exon1;Parent=MS.gene60881.t1
chr2.3 CDS 32039278 32039371 32039278 ID=cds.MS.gene60881.t1;Parent=MS.gene60881.t1
chr2.3 exon 32038755 32038967 32038755 ID=MS.gene60881.t1.exon2;Parent=MS.gene60881.t1
chr2.3 CDS 32038755 32038967 32038755 ID=cds.MS.gene60881.t1;Parent=MS.gene60881.t1
chr2.3 exon 32038434 32038634 32038434 ID=MS.gene60881.t1.exon3;Parent=MS.gene60881.t1
chr2.3 CDS 32038434 32038634 32038434 ID=cds.MS.gene60881.t1;Parent=MS.gene60881.t1
chr2.3 exon 32037551 32037643 32037551 ID=MS.gene60881.t1.exon4;Parent=MS.gene60881.t1
chr2.3 CDS 32037551 32037643 32037551 ID=cds.MS.gene60881.t1;Parent=MS.gene60881.t1
chr2.3 exon 32035893 32037457 32035893 ID=MS.gene60881.t1.exon5;Parent=MS.gene60881.t1
chr2.3 CDS 32035893 32037457 32035893 ID=cds.MS.gene60881.t1;Parent=MS.gene60881.t1
Gene Sequence

>MS.gene60881

ATGTTGAGTTCTCTTAGCAATTCCAAGAAAAAGAAAAGTCCACTCATTCAAACCTCATTTAAGCTTCCTGCTGATATACCAGTTTTTCCAACAGGTATGAGTCACATGATTTGTAGATATTTAGCACCAACACTTCAGACTGAACGTGTATTTTGTGTTTGACACCAACACATGTGATTATATTTAATTATTCTATTTTCATAAACTATTAATTGATCCCAATGTGTTAGTGTCATGTCCGATGTTGGTGTCAATGGTTCCTAGATTTCTACACCTATTTGCTTTATTCTATATATATACACCTGCTGATATACCTATTTCCTAAATAAGCAATGTAGTTAACATTTTATTTATTTTTTTTGAATTTTGGGATGATTTTTATTGGCTTATCATTTTATTTGAAGGTGATGGATTTGCAAGTGGCATCATTGATCTTGGTGGTGGTTTATTAGTGTCACAAATTTCAACATTCAACAAAGTTTGGACAACCAATGAAGGTGGACCAGATGATCTTGGAGTTACAATTTTTGAACCAACAGGTTTATCTGAAGGTTTCTTTGTTTTAGGATACTACTGCCAACCAAACAACAAACCTCTTCATGGTTGGGTTCTTGTAGGTAAAGATAACTCTTCACCCACAAACAAAGCTTTAAAAAAACCACTTGATTACAAATTGGTATGTAACATAAAGTCTCTACAAAACAAACATCACATACAAGGCTATATTTGGTTACCAGTAGCACCTGATGGCTACAAAGTTGTTGGCCATGTTGTCACTACTTCCCAAGAGAAGCCTTCACTAGACAAAATTATGTGTGTTAGATCAGACCTCACTGATGAATGTATCAAATACAAGTCAATGAAGCTTTGGAGAACAGAAAACAAGAGGTTCAATGTTTATGATGTTAGACCAATCAAGAGAGGTGTTGAAGCTAAAGGTGTTTATGTAGGAACCTTCCTTGCTCAATGTGGAAGGAAAAATTCTAAAACTTTGCCTATTGTTTGTTTGAAAAATACCAATGCTAATAGATTTTCTTCCATGCCTAATTTACACCAAATTGAGACATTAATCAAGGCTTACTCTCCATACATGTATTTGCATCCTATGGATAAGTACCTTCCATCTTCTGTGGAATGGTTTTTCATAAATGGGGCAATACTCTACCAAAAAAGAGATGGTGTCGTTAATGCGAGTCCAATTGAACCAACGGGATCAAACCTTCCCCAATTTGTCTAAGGATCTATAAAATTGAAGACGCCAAAATCATTACTTAAATTTGTAATGTGCTCTAAACGAAGAAAATCTATCAATCCAAACCGAATGAACACTGCAACAAGATGAAAAATTAAACTGCCACAGCAAGAAAACGAACAACACAACCGACTCTCACTTAGACGACAAAATAAAAGACAATTCTTAGCGAGCTAATTCTATGCATCTATGAGATTTGTTTTCGGCTTCTGGAAAAGCTAATTCTTAGCGAGCTTCCCAAGATTTCCATAGAATATAAATTTTAAGGTGTCTCATAGATACTTACCCCAAATCAAATTCACATGGAAAATTATGCTTAACAAGAGTTTATAAGGAATAACACTCCTCATCTTATAAGTCGATTTTGTAAGTATTTGTTAGACCTAATATATGAACTTAATAATTAACAAGAGACCTTATTCCCCTTGCATGAACACATAGTGTAATTGTCTTACCACATGTTTTTTTGTTTGCAGAGAATAAGAATGATTTCAAGAAAAAGCGATCCCGCTCTCGCCACATTCACTACACATCTAAGCTTCCTGTTTCACAACCTTCTTGGCCAGAAGGTATCATTTATGTGATTTCAATTTTCTGTCCATTTGTAATATATTCTAGTCAATGTAAGCTAACTATAGCAAGTATTAAATTGCAACATAAAGGTACCAGTTTTGCAAACACAGTCATCAATCTAGGTGAGCTGCATGTGATGCAAGCATCAACATTCAGCAAAGTTTGGGGCGCCTACGACGGTGGACCGGGCAATCGAGGCGCTTCAGTTTATGAACCAACAGGACTGACTTATGGATACTCTATGTTAGGCAGTTACAGCCAACCCAACAGCAAGCCTCTTTTTGGTTATGTTCTTGTAGCAAAGGATATTTCAGGAAAGAGTAATGGCACTTTAAAGCCACCTCTTGATTACTCACTTGTATTGAACACTGCATCCGCCACGGTTACTCAAGACTCTCCTTTGTATATTTGGCTACCAATAGCACCTCATGGCTACCATGCTGTAGGCCATGTTGTCACCAAAACACAAGATAAACCTTCCACCAACAAAGTCATGTGTGTCAGATCAGACCACACAGAGCAATGTGAATCGTCTACATTGATTTGGGGATCAAACGGCTTAAATTTTTACGATGTTAGACCAATAAATAGAGGAATTAAAGCTCCCGGTGTTCGAGTTGGCACCTTTGTTGCTCAAATTGGTGGGAATATTAACCCTTCATCAATTTCATGTTTGAAGAATGTTGATTCTATTACACAAATCATGCCTAGTAAAAAACAAATTGATGCACTACTCCAAGTTAACGCTCCATTCCTATACTTACATTCTGATGAAGAATACTTACCTTCCTCGGTTAATTGGTTTTTCTCCAACGGAGCATTACTATACAAGAAAGGTCAAGAATCAAATCCTGTTCCCATAGCACAAAATGGTGCTAACCTTCCTCAAGATCCTAACACTGATGGTTCCTATTGGCTTGACCTACCTGCTGATAATGCAAACAAAGAGAGAGTCAAGAAAGGTAATCTACATAGTGCAGAATCATATGTACATGTGAAACCAATGTATGGAGGAACATTCACTGATATTGCCATGTGGGTTTTTTATCCTTTCAATGGACCTGGAAGGGCTAAAGTAGAGTTTATAGATATTAAATTGGGGAAAGCAGGTGAACATGTTGGTGATTGGGAGCATGTGACATTAAGGGTAAGTAACTTCGATGGTCAATTATGGCATATCTACTTCTCTCAACACAATGCTGGTAAATGGATTGATTCATCTCAACTTGAGTTCCGAAGTGATGCTAGTAGTTTTGATTTTCCAACAAAAAGGCCTATTGTTTATGCTTCTTTGCATGGTCATGCATCATATCCACATGCTGGCATTAATCTACTAGGGAAAAATGGAGTAGGTGCAAGAGATGATACTAATAAAGGTAGAAATGTTATGGATATGGGAAAATATGTATTGGTTTCTGCAGAATATTTAGGGTCTGAAGTTAAAGAGCCAGCATGGTTGAATTATTTTAGGGAGTGGGGTCCACATATTGACTTTGATCTAGATATTGAATTGCAGAATGTGGCTAAGGCGTTGCCTGGGAAGTTAAGAGATGGTTTTGAAAATATTATTAGGAGTTTACCAAAAGAAGCCTTGGGAGAGGAAGGACCAACAGGTCCAAAGGAAAAGAGTAATTGGAATGGTGATGAAGTTTGA
Protein sequence

>MS.gene60881.t1

MLSSLSNSKKKKSPLIQTSFKLPADIPVFPTGDGFASGIIDLGGGLLVSQISTFNKVWTTNEGGPDDLGVTIFEPTGLSEGFFVLGYYCQPNNKPLHGWVLVVAPDGYKVVGHVVTTSQEKPSLDKIMCVRSDLTDECIKYKSMKLWRTENKRFNVYDVRPIKRGVEAKENKNDFKKKRSRSRHIHYTSKLPVSQPSWPEGTSFANTVINLGELHVMQASTFSKVWGAYDGGPGNRGASVYEPTGLTYGYSMLGSYSQPNSKPLFGYVLVAKDISGKSNGTLKPPLDYSLVLNTASATVTQDSPLYIWLPIAPHGYHAVGHVVTKTQDKPSTNKVMCVRSDHTEQCESSTLIWGSNGLNFYDVRPINRGIKAPGVRVGTFVAQIGGNINPSSISCLKNVDSITQIMPSKKQIDALLQVNAPFLYLHSDEEYLPSSVNWFFSNGALLYKKGQESNPVPIAQNGANLPQDPNTDGSYWLDLPADNANKERVKKGNLHSAESYVHVKPMYGGTFTDIAMWVFYPFNGPGRAKVEFIDIKLGKAGEHVGDWEHVTLRVSNFDGQLWHIYFSQHNAGKWIDSSQLEFRSDASSFDFPTKRPIVYASLHGHASYPHAGINLLGKNGVGARDDTNKGRNVMDMGKYVLVSAEYLGSEVKEPAWLNYFREWGPHIDFDLDIELQNVAKALPGKLRDGFENIIRSLPKEALGEEGPTGPKEKSNWNGDEV