AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene043855

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043855.t1 MTR_2g062370 87.742 620 42 3 1 617 1 589 0.0 1100
MS.gene043855.t1 MTR_2g062410 76.537 618 109 3 1 617 3 585 0.0 965
MS.gene043855.t1 MTR_2g062380 84.240 533 84 0 86 618 28 560 0.0 946
MS.gene043855.t1 MTR_4g131710 68.489 622 156 6 1 618 1 586 0.0 845
MS.gene043855.t1 MTR_2g062430 68.557 582 140 4 37 617 13 552 0.0 831
MS.gene043855.t1 MTR_2g067640 56.121 531 202 8 98 618 32 541 0.0 603
MS.gene043855.t1 MTR_2g062340 51.601 531 200 10 98 617 32 516 3.10e-178 515
MS.gene043855.t1 MTR_1g080370 45.725 538 262 9 98 618 35 559 2.38e-163 479
MS.gene043855.t1 MTR_1g080410 45.725 538 262 9 98 618 35 559 2.38e-163 479
MS.gene043855.t1 MTR_5g007860 43.693 547 269 10 98 617 71 605 5.46e-154 456
MS.gene043855.t1 MTR_4g077620 44.527 539 269 11 98 617 40 567 4.55e-148 440
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene043855.t1 AT2G44260 53.553 577 255 6 43 617 17 582 0.0 633
MS.gene043855.t1 AT2G44260 57.663 522 209 5 98 617 41 552 0.0 624
MS.gene043855.t1 AT2G44230 53.143 525 228 6 97 617 31 541 0.0 569
MS.gene043855.t1 AT3G01870 48.674 528 248 7 98 617 71 583 1.02e-176 514
MS.gene043855.t1 AT3G01880 48.393 529 250 8 98 617 75 589 4.12e-172 502
MS.gene043855.t1 AT5G18490 45.028 533 262 9 98 617 37 551 9.67e-159 467
MS.gene043855.t1 AT3G04350 44.096 542 269 10 97 617 15 543 9.18e-154 454
MS.gene043855.t1 AT3G04350 44.177 541 268 10 98 617 38 565 5.69e-153 452
MS.gene043855.t1 AT5G43950 41.912 544 293 9 90 617 28 564 1.69e-144 431
MS.gene043855.t1 AT1G04090 41.209 546 284 12 98 617 36 570 4.81e-141 422

Find 149 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACTCCCCTTTGTATATT+TGG 0.124214 2.2:+27220740 MS.gene043855:CDS
GCTTTCCCAGGTCCATTAAA+AGG 0.194984 2.2:-27221399 None:intergenic
ATTGGTTTCTGCAGAGTATT+TGG 0.229797 2.2:+27221758 MS.gene043855:CDS
CTTGTAGCAAAGGATATTTC+AGG 0.255851 2.2:+27220643 MS.gene043855:CDS
AGGTAGCAATGTTATGGATA+TGG 0.258056 2.2:+27221725 MS.gene043855:CDS
CATGACTGCGTTTGCGAAAC+TGG 0.267907 2.2:-27220443 None:intergenic
GTGAGTCTTCTACATGGATT+TGG 0.274745 2.2:+27220875 MS.gene043855:CDS
CATCAACATTCAGCAAAGTT+TGG 0.275579 2.2:+27220494 MS.gene043855:CDS
TCCTCTCCCAGCACTTCTTT+TGG 0.282938 2.2:-27221930 None:intergenic
ATTGGGAGCATGTGACATTA+AGG 0.285039 2.2:+27221475 MS.gene043855:CDS
GTCCAAAGGAAAAGGGTAAT+TGG 0.292083 2.2:+27221964 MS.gene043855:CDS
GCACCAATGGATCAAGTTTC+AGG 0.296778 2.2:+27216974 MS.gene043855:CDS
AATTTGAAGTTAGGGAAAAT+AGG 0.310027 2.2:+27221438 MS.gene043855:CDS
ATCAACATTCAGCAAAGTTT+GGG 0.318101 2.2:+27220495 MS.gene043855:CDS
GGTACCTTCGTTGCTCAAAA+TGG 0.332082 2.2:+27220970 MS.gene043855:CDS
GAGTTCATAAATTTGAAGTT+AGG 0.341852 2.2:+27221429 MS.gene043855:CDS
TGAGTCTTCTACATGGATTT+GGG 0.342802 2.2:+27220876 MS.gene043855:CDS
GCTTTAGTTCCTCTATTGAT+TGG 0.347877 2.2:-27220931 None:intergenic
CTCGAAGAAGTTTGTGCAAT+AGG 0.348542 2.2:-27220319 None:intergenic
GAACCAACGGGACTGACTTA+TGG 0.352846 2.2:+27220562 MS.gene043855:CDS
GACCTGTGGTTTATGCTTCT+CGG 0.360096 2.2:+27221622 MS.gene043855:CDS
CATGCTGGCCTTCATCTACT+AGG 0.369862 2.2:+27221666 MS.gene043855:CDS
CTGACACACATGACTTTGTT+GGG 0.371564 2.2:-27220832 None:intergenic
CTCAACATAATGGTGGTTCA+TGG 0.380091 2.2:+27221538 MS.gene043855:CDS
TTCATGGCAATTCAAGCAAT+GGG 0.381954 2.2:+27216938 MS.gene043855:CDS
GTCTATTTCTCTCAACATAA+TGG 0.382864 2.2:+27221528 MS.gene043855:CDS
TCTGACACACATGACTTTGT+TGG 0.395634 2.2:-27220833 None:intergenic
CTAACAATGATGGTGCCTAT+TGG 0.409794 2.2:+27221244 MS.gene043855:CDS
CAATAGGCACCATCATTGTT+AGG 0.412763 2.2:-27221243 None:intergenic
TGATAAAGGTAGCAATGTTA+TGG 0.414830 2.2:+27221719 MS.gene043855:CDS
AGTTCATAAATTTGAAGTTA+GGG 0.416307 2.2:+27221430 MS.gene043855:CDS
ACTTACCTTCCTCTGTCAAT+TGG 0.417119 2.2:+27221130 MS.gene043855:CDS
ACTTATGGATACTCCATGTT+AGG 0.419517 2.2:+27220577 MS.gene043855:CDS
GTCTCAAGTTGTGTTAGATT+AGG 0.420473 2.2:-27221057 None:intergenic
AGCTTGAATGTGTGGTCAAT+GGG 0.428759 2.2:-27220295 None:intergenic
GCAAGAGATGATACTGATAA+AGG 0.429248 2.2:+27221705 MS.gene043855:CDS
CTTCATCAGGATGCAAGTAT+AGG 0.432505 2.2:-27221104 None:intergenic
GGATATGGGAAAATATGTAT+TGG 0.435630 2.2:+27221740 MS.gene043855:CDS
TCTTTATTTGCATCATCAAC+AGG 0.436217 2.2:-27221276 None:intergenic
ACCAACAGGTCCAAAGGAAA+AGG 0.437204 2.2:+27221956 MS.gene043855:CDS
CCTGTTGCAATAGCACAAAA+TGG 0.439644 2.2:+27221201 MS.gene043855:CDS
GAAGGTAAGTATTCTTCATC+AGG 0.444599 2.2:-27221117 None:intergenic
GGGTTTACCAAAAGAAGTGC+TGG 0.449038 2.2:+27221923 MS.gene043855:CDS
GGTAGCAATGTTATGGATAT+GGG 0.449769 2.2:+27221726 MS.gene043855:CDS
AATGTTGAGAAGTTATTGCC+TGG 0.454803 2.2:+27221867 MS.gene043855:CDS
GTACATGTGAAACCAATGTT+TGG 0.455920 2.2:+27221339 MS.gene043855:CDS
AATACTAGTGAGTAATCAAC+AGG 0.461578 2.2:-27220691 None:intergenic
CTTGTATAGTAACGCTCCAT+TGG 0.467093 2.2:-27221160 None:intergenic
ATAGGAATGGAGAGTAAGAG+TGG 0.472282 2.2:-27221086 None:intergenic
GCAAACGCAGTCATGAATCT+AGG 0.473630 2.2:+27220451 MS.gene043855:CDS
TAGGTGAACATGTTGGTGAT+TGG 0.478019 2.2:+27221457 MS.gene043855:CDS
TGGTAGCCATCAGGTGCTAT+TGG 0.479434 2.2:-27220766 None:intergenic
CTGGGAGAGGAAGGACCAAC+AGG 0.482050 2.2:+27221942 MS.gene043855:CDS
GGAAGGTTTGTCTTGTGTTG+TGG 0.484281 2.2:-27220809 None:intergenic
GTGGTTTATGCTTCTCGGCA+TGG 0.484909 2.2:+27221627 MS.gene043855:CDS
ACTGAGGCGCCTTGATCGTC+CGG 0.485272 2.2:-27220535 None:intergenic
TTGATGATGCAAATAAAGAA+AGG 0.492381 2.2:+27221280 MS.gene043855:CDS
GTACCTGAAACTTGATCCAT+TGG 0.493805 2.2:-27216977 None:intergenic
TTGGTAGCCAAATATACAAA+GGG 0.494599 2.2:-27220747 None:intergenic
AACAGGTAGGTCAAGCCAAT+AGG 0.497340 2.2:-27221259 None:intergenic
TATAGAAATGGGCATGAATG+TGG 0.498049 2.2:+27216889 None:intergenic
GGTTCCTACAGCTGCACCAA+TGG 0.498456 2.2:+27216961 MS.gene043855:CDS
CTTTCCCAGGTCCATTAAAA+GGG 0.501041 2.2:-27221398 None:intergenic
GTGGTCAATGGGGCGAGAGC+GGG 0.505037 2.2:-27220284 None:intergenic
GACATTAAGGGTAAGTAACT+TGG 0.505898 2.2:+27221488 MS.gene043855:CDS
TGGATATGTTCTTGTAGCAA+AGG 0.506215 2.2:+27220633 MS.gene043855:CDS
TTGGCTGTAGCTTCCTAACA+TGG 0.507947 2.2:-27220590 None:intergenic
TTTCATGGCAATTCAAGCAA+TGG 0.509557 2.2:+27216937 MS.gene043855:CDS
AGGTGAACATGTTGGTGATT+GGG 0.511142 2.2:+27221458 MS.gene043855:CDS
GAAGGTACCAACGCGAACAC+CGG 0.518336 2.2:-27220956 None:intergenic
GCCTCAGTGTATGAACCAAC+GGG 0.521228 2.2:+27220550 MS.gene043855:CDS
GAAGGTGGACCGGACGATCA+AGG 0.523730 2.2:+27220526 MS.gene043855:CDS
ATAGAAATGGGCATGAATGT+GGG 0.524401 2.2:+27216890 None:intergenic
AGTGTTGAATTGCAACATAC+AGG 0.524704 2.2:+27220418 MS.gene043855:CDS
AAGCTTGAATGTGTGGTCAA+TGG 0.525417 2.2:-27220296 None:intergenic
TTGGGAGCATGTGACATTAA+GGG 0.526297 2.2:+27221476 MS.gene043855:CDS
CCTCAGGATCCTAACAATGA+TGG 0.528215 2.2:+27221234 MS.gene043855:CDS
CCTACAGCATGGTAGCCATC+AGG 0.530924 2.2:-27220775 None:intergenic
GTGAATGTTCCTCCAAACAT+TGG 0.533393 2.2:-27221351 None:intergenic
CCAACAGGTCCAAAGGAAAA+GGG 0.535094 2.2:+27221957 MS.gene043855:CDS
AAGGTACCAACGCGAACACC+GGG 0.535734 2.2:-27220955 None:intergenic
TTCAAACATGAAATTGATGG+AGG 0.536359 2.2:-27221006 None:intergenic
ACATGAAATTGATGGAGGGT+TGG 0.537969 2.2:-27221001 None:intergenic
AAAGAGGTTTGTTGTTGGGT+TGG 0.542937 2.2:-27220609 None:intergenic
GTAACTTGGATGGTCAGTTA+TGG 0.544808 2.2:+27221502 MS.gene043855:CDS
AAATGGTACTAACCTTCCTC+AGG 0.545862 2.2:+27221218 MS.gene043855:CDS
GGAAGGACCAACAGGTCCAA+AGG 0.546506 2.2:+27221950 MS.gene043855:CDS
TGATCCATTGGTGCAGCTGT+AGG 0.550388 2.2:-27216965 None:intergenic
TCAGGATGCAAGTATAGGAA+TGG 0.556685 2.2:-27221099 None:intergenic
TCTAGACTATAGTCAATATG+TGG 0.557808 2.2:-27221831 None:intergenic
AAAGAAGTGCTGGGAGAGGA+AGG 0.559112 2.2:+27221933 MS.gene043855:CDS
ATGTTGAGAAGTTATTGCCT+GGG 0.560794 2.2:+27221868 MS.gene043855:CDS
CGCCTCAGTGTATGAACCAA+CGG 0.561230 2.2:+27220549 MS.gene043855:CDS
GCACAAACTTCTTCGAGTGA+AGG 0.562526 2.2:+27220325 MS.gene043855:CDS
ATGCTGGCCTTCATCTACTA+GGG 0.562857 2.2:+27221667 MS.gene043855:CDS
TGTGGTCAATGGGGCGAGAG+CGG 0.565396 2.2:-27220285 None:intergenic
TGATGATGCAAATAAAGAAA+GGG 0.567205 2.2:+27221281 MS.gene043855:CDS
AAGGAAAAGGGTAATTGGAA+TGG 0.567477 2.2:+27221969 MS.gene043855:CDS
AATAGAGGAACTAAAGCTCC+CGG 0.568897 2.2:+27220937 MS.gene043855:CDS
TAATACATTATAGTGAATGC+AGG 0.571622 2.2:+27220383 MS.gene043855:CDS
CATTGTTAGGATCCTGAGGA+AGG 0.572703 2.2:-27221230 None:intergenic
CATGGCAATTCAAGCAATGG+GGG 0.573247 2.2:+27216940 MS.gene043855:CDS
TCAAACATGAAATTGATGGA+GGG 0.575731 2.2:-27221005 None:intergenic
CATGCATCATATCCACATGC+TGG 0.576287 2.2:+27221651 MS.gene043855:CDS
GTTTGGGGCGCCTACGAAGG+TGG 0.577121 2.2:+27220511 MS.gene043855:CDS
TAGAAATGGGCATGAATGTG+GGG 0.577617 2.2:+27216891 None:intergenic
CTTGTGTTGTGGTGACAACA+AGG 0.577689 2.2:-27220798 None:intergenic
TGACACACATGACTTTGTTG+GGG 0.578338 2.2:-27220831 None:intergenic
ATTGGTAGCCAAATATACAA+AGG 0.583699 2.2:-27220748 None:intergenic
GGGCGCCTACGAAGGTGGAC+CGG 0.583899 2.2:+27220516 MS.gene043855:CDS
TATTTGCATCATCAACAGGT+AGG 0.588221 2.2:-27221272 None:intergenic
TCACTATAATGTATTACAAG+AGG 0.590425 2.2:-27220376 None:intergenic
ACCAAAAGAAGTGCTGGGAG+AGG 0.590505 2.2:+27221929 MS.gene043855:CDS
CTGAAGTTAAAGAGCCAGCA+TGG 0.591737 2.2:+27221784 MS.gene043855:CDS
GATGTTAGACCAATCAATAG+AGG 0.591766 2.2:+27220922 MS.gene043855:CDS
ATCGTCCGGTCCACCTTCGT+AGG 0.592536 2.2:-27220521 None:intergenic
TATTTCTCTCAACATAATGG+TGG 0.595363 2.2:+27221531 MS.gene043855:CDS
AAAGTTTGGGGCGCCTACGA+AGG 0.597769 2.2:+27220508 MS.gene043855:CDS
GGGAAAATAGGTGAACATGT+TGG 0.598707 2.2:+27221450 MS.gene043855:CDS
GGAGCGTTACTATACAAGAA+AGG 0.600026 2.2:+27221165 MS.gene043855:CDS
GATATTTCAGGAAAGAGCAA+TGG 0.606860 2.2:+27220655 MS.gene043855:CDS
CCTGATGGCTACCATGCTGT+AGG 0.611461 2.2:+27220775 MS.gene043855:CDS
CATGTGAAACCAATGTTTGG+AGG 0.614379 2.2:+27221342 MS.gene043855:CDS
AGCAATGTGAGTCTTCTACA+TGG 0.615710 2.2:+27220869 MS.gene043855:CDS
GAGTCTTCTACATGGATTTG+GGG 0.615942 2.2:+27220877 MS.gene043855:CDS
GGTTTACCAAAAGAAGTGCT+GGG 0.616870 2.2:+27221924 MS.gene043855:CDS
TATCCATAAGTCAGTCCCGT+TGG 0.618765 2.2:-27220565 None:intergenic
CCATCATTGTTAGGATCCTG+AGG 0.623207 2.2:-27221234 None:intergenic
TGCCGAGAAGCATAAACCAC+AGG 0.627638 2.2:-27221624 None:intergenic
AATAAAGAAAGGGTCAAGCA+AGG 0.630463 2.2:+27221291 MS.gene043855:CDS
TCAACATTCAGCAAAGTTTG+GGG 0.632154 2.2:+27220496 MS.gene043855:CDS
AGTAGATGAAGGCCAGCATG+TGG 0.633143 2.2:-27221663 None:intergenic
TGGCTACCAATAGCACCTGA+TGG 0.636406 2.2:+27220760 MS.gene043855:CDS
AAAGCTCCCGGTGTTCGCGT+TGG 0.645605 2.2:+27220949 MS.gene043855:CDS
ATTGAACACTGCATCCGTCA+CGG 0.650457 2.2:+27220711 MS.gene043855:CDS
TGACAACAAGGCCTACAGCA+TGG 0.652162 2.2:-27220786 None:intergenic
CAATAGGAAGCTTGAATGTG+TGG 0.655769 2.2:-27220303 None:intergenic
TAAACCACAGGTCTTTGTGT+CGG 0.656244 2.2:-27221612 None:intergenic
GACACACATGACTTTGTTGG+GGG 0.656587 2.2:-27220830 None:intergenic
TCATGGCAATTCAAGCAATG+GGG 0.659051 2.2:+27216939 MS.gene043855:CDS
TTAAGGGTAAGTAACTTGGA+TGG 0.663636 2.2:+27221492 MS.gene043855:CDS
GGAGTCTTGATCAACCGTGA+CGG 0.669237 2.2:-27220725 None:intergenic
ACTAGTGAGTAATCAACAGG+TGG 0.691530 2.2:-27220688 None:intergenic
AAGACTCACATTGCTCTGTG+AGG 0.699723 2.2:-27220861 None:intergenic
TGGTAGCCAAATATACAAAG+GGG 0.704831 2.2:-27220746 None:intergenic
CATTCACTGATATTGCCATG+TGG 0.716023 2.2:+27221367 MS.gene043855:CDS
GCTTGAATGTGTGGTCAATG+GGG 0.727664 2.2:-27220294 None:intergenic
TCCCGTTGGTTCATACACTG+AGG 0.727884 2.2:-27220551 None:intergenic
AAAAGGGTAGAAAATCCACA+TGG 0.732112 2.2:-27221382 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATAATTTAAATAAAA+TGG + chr2.2:27218163-27218182 MS.gene043855:intron 0.0%
!!! TTTTTTTTTATTTTTTTTTA+TGG + chr2.2:27217667-27217686 MS.gene043855:intron 0.0%
!! AAAAAATCGTAAAAAAAATT+CGG - chr2.2:27219533-27219552 None:intergenic 10.0%
!! ACAAAATAATTAGAAAAAAT+AGG + chr2.2:27217130-27217149 MS.gene043855:intron 10.0%
!! TTAAAAGTCAAAAAAAATTT+CGG - chr2.2:27219593-27219612 None:intergenic 10.0%
!!! AAAATCTAAAATGTAATAAA+TGG - chr2.2:27217892-27217911 None:intergenic 10.0%
!!! AAATATCAAGTTATATTTTT+TGG - chr2.2:27219256-27219275 None:intergenic 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG - chr2.2:27219557-27219576 None:intergenic 10.0%
!!! GTTTATTTTTTATTTTTTTG+AGG + chr2.2:27218954-27218973 MS.gene043855:intron 10.0%
!!! GTTTTTGAAAAAATTATTAT+GGG + chr2.2:27221903-27221922 MS.gene043855:CDS 10.0%
!!! TATTTTTTCTAATTATTTTG+TGG - chr2.2:27217131-27217150 None:intergenic 10.0%
!!! TGTTTTTGAAAAAATTATTA+TGG + chr2.2:27221902-27221921 MS.gene043855:CDS 10.0%
!! AAAAATCGTAAAAAAAATTC+GGG - chr2.2:27219532-27219551 None:intergenic 15.0%
!! AAACAAAAAAAAAATAAGTC+AGG - chr2.2:27219476-27219495 None:intergenic 15.0%
!! AACAAAAAAAAAATAAGTCA+GGG - chr2.2:27219475-27219494 None:intergenic 15.0%
!! ATCATAATTTAGTCAAAATT+TGG - chr2.2:27217741-27217760 None:intergenic 15.0%
!! GATGTAGAAAATTTATTTAA+TGG + chr2.2:27217761-27217780 MS.gene043855:intron 15.0%
!! TATATTATAGTTGAACAAAA+TGG + chr2.2:27217227-27217246 MS.gene043855:intron 15.0%
!! TTTATGTAAATCTAAATAGT+AGG - chr2.2:27218298-27218317 None:intergenic 15.0%
!! TTTGTGACAAAATTTAAAAA+TGG + chr2.2:27217862-27217881 MS.gene043855:intron 15.0%
!!! AAATATCAAGTTATTTTGTA+TGG - chr2.2:27219229-27219248 None:intergenic 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG - chr2.2:27219556-27219575 None:intergenic 15.0%
!!! ATTTTTTTAAATTTGACTGT+TGG - chr2.2:27218360-27218379 None:intergenic 15.0%
!!! TAAAACCAATATTTCTTTTT+TGG - chr2.2:27219148-27219167 None:intergenic 15.0%
!! AAATAAAGATATGGTAACAA+TGG - chr2.2:27217072-27217091 None:intergenic 20.0%
!! ACAAAAAAAAAATAAGTCAG+GGG - chr2.2:27219474-27219493 None:intergenic 20.0%
!! ACCTTAAAATTAATCTTCTA+GGG - chr2.2:27220039-27220058 None:intergenic 20.0%
!! AGATTGGTGTAATATTATAT+CGG + chr2.2:27218412-27218431 MS.gene043855:intron 20.0%
!! ATGTGTGACAAAATAAAATT+AGG - chr2.2:27217711-27217730 None:intergenic 20.0%
!! GATATAAATGTAAAATCTCA+CGG + chr2.2:27218745-27218764 MS.gene043855:intron 20.0%
!! GTTTATAATATTCAGATCAT+CGG + chr2.2:27218562-27218581 MS.gene043855:intron 20.0%
!! TAAATGATTAAACTTTGCAA+GGG + chr2.2:27219776-27219795 MS.gene043855:intron 20.0%
!! TAAATGATTAAACTTTGCAA+GGG - chr2.2:27219795-27219776 None:intergenic 20.0%
!! TTAAATGATTAAACTTTGCA+AGG + chr2.2:27219775-27219794 MS.gene043855:intron 20.0%
!! TTAAATGATTAAACTTTGCA+AGG - chr2.2:27219794-27219775 None:intergenic 20.0%
!! TTAGTAAAAAAAAGTGAGTA+TGG - chr2.2:27218858-27218877 None:intergenic 20.0%
!! TTGTTCTATTGATATTAAAG+AGG - chr2.2:27217567-27217586 None:intergenic 20.0%
!! TTTAATTGAAGTTAAGGAAA+AGG - chr2.2:27219006-27219025 None:intergenic 20.0%
!!! AAACTGAATTTTTCTTTTGA+AGG - chr2.2:27219506-27219525 None:intergenic 20.0%
!!! AATAAACCACTAATTTTGAT+GGG - chr2.2:27218634-27218653 None:intergenic 20.0%
!!! AATTCATCATCCTTTTTTAT+TGG + chr2.2:27219106-27219125 MS.gene043855:intron 20.0%
!!! AGTTCATAAATTTGAAGTTA+GGG + chr2.2:27221430-27221449 MS.gene043855:CDS 20.0%
!!! ATTAGGTTTTAAAATTTGTG+AGG - chr2.2:27217694-27217713 None:intergenic 20.0%
!!! ATTTGTGCAAGTTTTATTTT+AGG + chr2.2:27219272-27219291 MS.gene043855:intron 20.0%
!!! ATTTTTAATAAACGTGTATG+TGG + chr2.2:27218118-27218137 MS.gene043855:intron 20.0%
!!! CAAATTTTTTATCAACACAA+GGG - chr2.2:27219977-27219996 None:intergenic 20.0%
!!! CAATCTAAAATCATTTGATA+TGG - chr2.2:27218697-27218716 None:intergenic 20.0%
!!! CATATCAAATGATTTTAGAT+TGG + chr2.2:27218695-27218714 MS.gene043855:intron 20.0%
!!! CGTACAATTTTAAAACTAAA+AGG - chr2.2:27217597-27217616 None:intergenic 20.0%
!!! TATTTGCTAAATGTTTTTCT+TGG + chr2.2:27217099-27217118 MS.gene043855:intron 20.0%
!!! TGATGAATTAGTTTAGAAAA+CGG - chr2.2:27219095-27219114 None:intergenic 20.0%
!!! TTTTTCAAACATGAAATTGA+TGG - chr2.2:27221012-27221031 None:intergenic 20.0%
! AAAAATAGGTATGTACCATT+TGG + chr2.2:27217144-27217163 MS.gene043855:intron 25.0%
! AAAATAGGTATGTACCATTT+GGG + chr2.2:27217145-27217164 MS.gene043855:intron 25.0%
! AAAATTGCTCAACTAAAGTT+AGG - chr2.2:27217629-27217648 None:intergenic 25.0%
! AAATTGCTCAACTAAAGTTA+GGG - chr2.2:27217628-27217647 None:intergenic 25.0%
! AACGAAAACAAATTATACCA+GGG - chr2.2:27218903-27218922 None:intergenic 25.0%
! ACGTCATCAAATTAACAAAA+TGG + chr2.2:27219428-27219447 MS.gene043855:intron 25.0%
! AGAGAATCCTTCAAAAAAAA+TGG + chr2.2:27217253-27217272 MS.gene043855:intron 25.0%
! CACCTTAAAATTAATCTTCT+AGG - chr2.2:27220040-27220059 None:intergenic 25.0%
! GTAGTAAAATAAAGGCTTAA+TGG - chr2.2:27219871-27219890 None:intergenic 25.0%
! TAACGAAAACAAATTATACC+AGG - chr2.2:27218904-27218923 None:intergenic 25.0%
! TAATACATTATAGTGAATGC+AGG + chr2.2:27220383-27220402 MS.gene043855:CDS 25.0%
! TCACTATAATGTATTACAAG+AGG - chr2.2:27220379-27220398 None:intergenic 25.0%
! TCGAATAAAACTATATTGAG+CGG + chr2.2:27218788-27218807 MS.gene043855:intron 25.0%
! TGAATTGGCAAGTATTATTA+AGG + chr2.2:27217029-27217048 MS.gene043855:intron 25.0%
! TGCATACAGTAGTAAAATAA+AGG - chr2.2:27219879-27219898 None:intergenic 25.0%
! TTCTGCCAAAAAAGAAATAT+TGG + chr2.2:27219140-27219159 MS.gene043855:intron 25.0%
! TTGAATAAAACGATATTGAG+CGG + chr2.2:27218385-27218404 MS.gene043855:intron 25.0%
! TTGATCTTTCCTATACATAA+AGG + chr2.2:27218441-27218460 MS.gene043855:intron 25.0%
!! AATTTGAAGTTAGGGAAAAT+AGG + chr2.2:27221438-27221457 MS.gene043855:CDS 25.0%
!! CCTTGTGTTGATAAAAAATT+TGG + chr2.2:27219975-27219994 MS.gene043855:intron 25.0%
!! GAATAAACCACTAATTTTGA+TGG - chr2.2:27218635-27218654 None:intergenic 25.0%
!! GAGTTCATAAATTTGAAGTT+AGG + chr2.2:27221429-27221448 MS.gene043855:CDS 25.0%
!! GATGAATTAGTTTAGAAAAC+GGG - chr2.2:27219094-27219113 None:intergenic 25.0%
!! TCCCTAGAAGATTAATTTTA+AGG + chr2.2:27220035-27220054 MS.gene043855:intron 25.0%
!! TGATGATGCAAATAAAGAAA+GGG + chr2.2:27221281-27221300 MS.gene043855:CDS 25.0%
!!! AAAACATCTTTTAATTTCCC+AGG - chr2.2:27221888-27221907 None:intergenic 25.0%
!!! AGCATGGTTGAATTTTTTTA+GGG + chr2.2:27221800-27221819 MS.gene043855:CDS 25.0%
!!! ATTTTGTTAATTTGATGACG+TGG - chr2.2:27219429-27219448 None:intergenic 25.0%
!!! CCAAATTTTTTATCAACACA+AGG - chr2.2:27219978-27219997 None:intergenic 25.0%
!!! GATATCGATTTTATGAAACA+TGG + chr2.2:27219175-27219194 MS.gene043855:intron 25.0%
!!! TAAAATCAACTTTTAAGTCG+AGG - chr2.2:27220120-27220139 None:intergenic 25.0%
!!! TTGATGATGCAAATAAAGAA+AGG + chr2.2:27221280-27221299 MS.gene043855:CDS 25.0%
AATACTAGTGAGTAATCAAC+AGG - chr2.2:27220694-27220713 None:intergenic 30.0%
AATAGACGGCGTTTAAAAAT+TGG - chr2.2:27219831-27219850 None:intergenic 30.0%
AATGGTGTAGAGAACTTAAT+TGG + chr2.2:27217271-27217290 MS.gene043855:intron 30.0%
AATTTGACTGTTGGATTGTA+AGG - chr2.2:27218351-27218370 None:intergenic 30.0%
ACAAGAACATATCCAAAAAG+AGG - chr2.2:27220628-27220647 None:intergenic 30.0%
ACGAAAACAAATTATACCAG+GGG - chr2.2:27218902-27218921 None:intergenic 30.0%
ACTTACACATCCAAATAATC+TGG + chr2.2:27217423-27217442 MS.gene043855:intron 30.0%
AGGAAAAAAAAAATTAGCCC+AGG + chr2.2:27219675-27219694 MS.gene043855:intron 30.0%
ATCAACATTCAGCAAAGTTT+GGG + chr2.2:27220495-27220514 MS.gene043855:CDS 30.0%
ATCTTTCCTATACATAAAGG+AGG + chr2.2:27218444-27218463 MS.gene043855:intron 30.0%
CTAAAAAAATTCAACCATGC+TGG - chr2.2:27221801-27221820 None:intergenic 30.0%
CTCAATGTGAATCTAATTCA+GGG - chr2.2:27220078-27220097 None:intergenic 30.0%
CTTAGAAAAAACTCGTACTT+TGG - chr2.2:27219053-27219072 None:intergenic 30.0%
GAAAAAAAAAATTAGCCCAG+GGG + chr2.2:27219677-27219696 MS.gene043855:intron 30.0%
GAAGGGTTTAATTGAAGTTA+AGG - chr2.2:27219012-27219031 None:intergenic 30.0%
GAAGTTCACACCAATAAAAA+AGG - chr2.2:27219119-27219138 None:intergenic 30.0%
GGAAAAAAAAAATTAGCCCA+GGG + chr2.2:27219676-27219695 MS.gene043855:intron 30.0%
GGATATGGGAAAATATGTAT+TGG + chr2.2:27221740-27221759 MS.gene043855:CDS 30.0%
TATTTCTCTCAACATAATGG+TGG + chr2.2:27221531-27221550 MS.gene043855:CDS 30.0%
TCAAACATGAAATTGATGGA+GGG - chr2.2:27221008-27221027 None:intergenic 30.0%
TCGAGTAAAACGATATTAAG+CGG - chr2.2:27218508-27218527 None:intergenic 30.0%
TCTAGACTATAGTCAATATG+TGG - chr2.2:27221834-27221853 None:intergenic 30.0%
TCTCAATGTGAATCTAATTC+AGG - chr2.2:27220079-27220098 None:intergenic 30.0%
TCTTTCCTATACATAAAGGA+GGG + chr2.2:27218445-27218464 MS.gene043855:intron 30.0%
TGATAAAGGTAGCAATGTTA+TGG + chr2.2:27221719-27221738 MS.gene043855:CDS 30.0%
TTCAAACATGAAATTGATGG+AGG - chr2.2:27221009-27221028 None:intergenic 30.0%
TTTCATAGTTTCACTTGACA+AGG - chr2.2:27217458-27217477 None:intergenic 30.0%
! ATCGTTTTCTTTCTTTTCAC+GGG + chr2.2:27217378-27217397 MS.gene043855:intron 30.0%
! ATTGGTAGCCAAATATACAA+AGG - chr2.2:27220751-27220770 None:intergenic 30.0%
! CATCGTTTTCTTTCTTTTCA+CGG + chr2.2:27217377-27217396 MS.gene043855:intron 30.0%
! GTCTATTTCTCTCAACATAA+TGG + chr2.2:27221528-27221547 MS.gene043855:CDS 30.0%
! TCTTTATTTGCATCATCAAC+AGG - chr2.2:27221279-27221298 None:intergenic 30.0%
! TGGATTTTCTACCCTTTTAA+TGG + chr2.2:27221387-27221406 MS.gene043855:CDS 30.0%
! TTAAGACTTGTTTGATGTTC+AGG + chr2.2:27217499-27217518 MS.gene043855:intron 30.0%
! TTGGTAGCCAAATATACAAA+GGG - chr2.2:27220750-27220769 None:intergenic 30.0%
!! AAAAAGTACTCGTTATCACA+AGG - chr2.2:27219939-27219958 None:intergenic 30.0%
!! AAAAGTACTCGTTATCACAA+GGG - chr2.2:27219938-27219957 None:intergenic 30.0%
!! ACTTTGGTCTTATATGTTGT+TGG - chr2.2:27219037-27219056 None:intergenic 30.0%
!! CTTTGGTCTTATATGTTGTT+GGG - chr2.2:27219036-27219055 None:intergenic 30.0%
!!! CAGCATGGTTGAATTTTTTT+AGG + chr2.2:27221799-27221818 MS.gene043855:CDS 30.0%
!!! CTCTACACCATTTTTTTTGA+AGG - chr2.2:27217263-27217282 None:intergenic 30.0%
!!! GTTGAATTTTTTTAGGGAGT+GGG + chr2.2:27221806-27221825 MS.gene043855:CDS 30.0%
!!! TTGAATTTTTTTAGGGAGTG+GGG + chr2.2:27221807-27221826 MS.gene043855:CDS 30.0%
AAAAACCAATTGACAGAGGA+AGG - chr2.2:27221138-27221157 None:intergenic 35.0%
AAAAGGGTAGAAAATCCACA+TGG - chr2.2:27221385-27221404 None:intergenic 35.0%
AAGACTCCCCTTTGTATATT+TGG + chr2.2:27220740-27220759 MS.gene043855:CDS 35.0%
AAGGAAAAGGGTAATTGGAA+TGG + chr2.2:27221969-27221988 MS.gene043855:CDS 35.0%
AATAAAGAAAGGGTCAAGCA+AGG + chr2.2:27221291-27221310 MS.gene043855:CDS 35.0%
AATAGGCCGCGTTTAAAAAT+TGG + chr2.2:27219320-27219339 MS.gene043855:intron 35.0%
AATGTTGAGAAGTTATTGCC+TGG + chr2.2:27221867-27221886 MS.gene043855:CDS 35.0%
ACACGATTGAAAAACTATGG+CGG + chr2.2:27218228-27218247 MS.gene043855:intron 35.0%
ACTTATGGATACTCCATGTT+AGG + chr2.2:27220577-27220596 MS.gene043855:CDS 35.0%
AGAAGCTGCAACAAAATGTA+TGG - chr2.2:27217336-27217355 None:intergenic 35.0%
AGGTAGCAATGTTATGGATA+TGG + chr2.2:27221725-27221744 MS.gene043855:CDS 35.0%
ATGTTGAGAAGTTATTGCCT+GGG + chr2.2:27221868-27221887 MS.gene043855:CDS 35.0%
CATCAACATTCAGCAAAGTT+TGG + chr2.2:27220494-27220513 MS.gene043855:CDS 35.0%
CGAAAACAAATTATACCAGG+GGG - chr2.2:27218901-27218920 None:intergenic 35.0%
CTTATATGTTGTTGGGAGAA+GGG - chr2.2:27219029-27219048 None:intergenic 35.0%
CTTCATCTACTAGGGAAAAA+TGG + chr2.2:27221675-27221694 MS.gene043855:CDS 35.0%
CTTGTAGCAAAGGATATTTC+AGG + chr2.2:27220643-27220662 MS.gene043855:CDS 35.0%
GAAGGTAAGTATTCTTCATC+AGG - chr2.2:27221120-27221139 None:intergenic 35.0%
GACATTAAGGGTAAGTAACT+TGG + chr2.2:27221488-27221507 MS.gene043855:CDS 35.0%
GAGAAAGGAACCAGATTATT+TGG - chr2.2:27217436-27217455 None:intergenic 35.0%
GATATTAAGCGGTCTAACAT+TGG - chr2.2:27218497-27218516 None:intergenic 35.0%
GATATTTCAGGAAAGAGCAA+TGG + chr2.2:27220655-27220674 MS.gene043855:CDS 35.0%
GATGTTAGACCAATCAATAG+AGG + chr2.2:27220922-27220941 MS.gene043855:CDS 35.0%
GCAAGAGATGATACTGATAA+AGG + chr2.2:27221705-27221724 MS.gene043855:CDS 35.0%
GGTAGCAATGTTATGGATAT+GGG + chr2.2:27221726-27221745 MS.gene043855:CDS 35.0%
GTACATGTGAAACCAATGTT+TGG + chr2.2:27221339-27221358 MS.gene043855:CDS 35.0%
GTCACACGATTGAAAAACTA+TGG + chr2.2:27218225-27218244 MS.gene043855:intron 35.0%
TATTTGCATCATCAACAGGT+AGG - chr2.2:27221275-27221294 None:intergenic 35.0%
TCAACATTCAGCAAAGTTTG+GGG + chr2.2:27220496-27220515 MS.gene043855:CDS 35.0%
TCAGAAAATGAGTCAACTAG+AGG + chr2.2:27218197-27218216 MS.gene043855:intron 35.0%
TCTTATATGTTGTTGGGAGA+AGG - chr2.2:27219030-27219049 None:intergenic 35.0%
TGGATATGTTCTTGTAGCAA+AGG + chr2.2:27220633-27220652 MS.gene043855:CDS 35.0%
TGGTAGCCAAATATACAAAG+GGG - chr2.2:27220749-27220768 None:intergenic 35.0%
TGTCGTATTCTTTGTACGTA+TGG - chr2.2:27217187-27217206 None:intergenic 35.0%
TTAAGGGTAAGTAACTTGGA+TGG + chr2.2:27221492-27221511 MS.gene043855:CDS 35.0%
TTCATGGCAATTCAAGCAAT+GGG + chr2.2:27216938-27216957 MS.gene043855:CDS 35.0%
TTGAGACCCATCAAAATTAG+TGG + chr2.2:27218625-27218644 MS.gene043855:intron 35.0%
TTGATCCCTCCTTTATGTAT+AGG - chr2.2:27218453-27218472 None:intergenic 35.0%
TTTCATGGCAATTCAAGCAA+TGG + chr2.2:27216937-27216956 MS.gene043855:CDS 35.0%
! AATCTTCTAGGGAAATCTTG+TGG - chr2.2:27220028-27220047 None:intergenic 35.0%
! AGTGTTGAATTGCAACATAC+AGG + chr2.2:27220418-27220437 MS.gene043855:CDS 35.0%
! ATTGGTTTCTGCAGAGTATT+TGG + chr2.2:27221758-27221777 MS.gene043855:CDS 35.0%
! CAAGGACCAATTTTTAAACG+CGG - chr2.2:27219841-27219822 None:intergenic 35.0%
! CATTTTTCCCTAGTAGATGA+AGG - chr2.2:27221677-27221696 None:intergenic 35.0%
! GCTTTAGTTCCTCTATTGAT+TGG - chr2.2:27220934-27220953 None:intergenic 35.0%
! GTCTCAAGTTGTGTTAGATT+AGG - chr2.2:27221060-27221079 None:intergenic 35.0%
! TATGTACCATTTGGGATGTA+AGG + chr2.2:27217153-27217172 MS.gene043855:intron 35.0%
! TGTTTGTGTTGTGCTTTTCA+TGG + chr2.2:27216922-27216941 MS.gene043855:CDS 35.0%
! TTCCAATTACCCTTTTCCTT+TGG - chr2.2:27221969-27221988 None:intergenic 35.0%
! TTTTCACCTTACATCCCAAA+TGG - chr2.2:27217162-27217181 None:intergenic 35.0%
!! CCAAAAAGAGGTTTGTTGTT+GGG - chr2.2:27220616-27220635 None:intergenic 35.0%
!! GGAATGGTGATGAATTTTGA+GGG + chr2.2:27221985-27222004 MS.gene043855:CDS 35.0%
!! TCCAAAAAGAGGTTTGTTGT+TGG - chr2.2:27220617-27220636 None:intergenic 35.0%
!! TGGAATGGTGATGAATTTTG+AGG + chr2.2:27221984-27222003 MS.gene043855:CDS 35.0%
!!! GGTTGAATTTTTTTAGGGAG+TGG + chr2.2:27221805-27221824 MS.gene043855:CDS 35.0%
!!! GTCAATTGGTTTTTCTCCAA+TGG + chr2.2:27221144-27221163 MS.gene043855:CDS 35.0%
AAATGGTACTAACCTTCCTC+AGG + chr2.2:27221218-27221237 MS.gene043855:CDS 40.0%
AAGCTTGAATGTGTGGTCAA+TGG - chr2.2:27220299-27220318 None:intergenic 40.0%
AATAGAGGAACTAAAGCTCC+CGG + chr2.2:27220937-27220956 MS.gene043855:CDS 40.0%
ACATGAAATTGATGGAGGGT+TGG - chr2.2:27221004-27221023 None:intergenic 40.0%
ACCAGATTAGCAAAATGGCA+TGG - chr2.2:27219718-27219737 None:intergenic 40.0%
ACGTCACCAGATTAGCAAAA+TGG - chr2.2:27219723-27219742 None:intergenic 40.0%
ACTAGTGAGTAATCAACAGG+TGG - chr2.2:27220691-27220710 None:intergenic 40.0%
ACTTACCTTCCTCTGTCAAT+TGG + chr2.2:27221130-27221149 MS.gene043855:CDS 40.0%
AGCAATGTGAGTCTTCTACA+TGG + chr2.2:27220869-27220888 MS.gene043855:CDS 40.0%
AGCTTGAATGTGTGGTCAAT+GGG - chr2.2:27220298-27220317 None:intergenic 40.0%
AGGGGGTTATTAAAGACAAG+GGG - chr2.2:27218884-27218903 None:intergenic 40.0%
ATAGGAATGGAGAGTAAGAG+TGG - chr2.2:27221089-27221108 None:intergenic 40.0%
CAATAGGAAGCTTGAATGTG+TGG - chr2.2:27220306-27220325 None:intergenic 40.0%
CAATAGGCACCATCATTGTT+AGG - chr2.2:27221246-27221265 None:intergenic 40.0%
CAGGGGGTTATTAAAGACAA+GGG - chr2.2:27218885-27218904 None:intergenic 40.0%
CATGTGAAACCAATGTTTGG+AGG + chr2.2:27221342-27221361 MS.gene043855:CDS 40.0%
CATTCACTGATATTGCCATG+TGG + chr2.2:27221367-27221386 MS.gene043855:CDS 40.0%
CCAGATTAGCAAAATGGCAT+GGG - chr2.2:27219717-27219736 None:intergenic 40.0%
CCTGTTGCAATAGCACAAAA+TGG + chr2.2:27221201-27221220 MS.gene043855:CDS 40.0%
CTACTAGGGAAAAATGGAGT+AGG + chr2.2:27221681-27221700 MS.gene043855:CDS 40.0%
CTCAACATAATGGTGGTTCA+TGG + chr2.2:27221538-27221557 MS.gene043855:CDS 40.0%
CTCGAAGAAGTTTGTGCAAT+AGG - chr2.2:27220322-27220341 None:intergenic 40.0%
CTGACACACATGACTTTGTT+GGG - chr2.2:27220835-27220854 None:intergenic 40.0%
CTTCATCAGGATGCAAGTAT+AGG - chr2.2:27221107-27221126 None:intergenic 40.0%
CTTGTATAGTAACGCTCCAT+TGG - chr2.2:27221163-27221182 None:intergenic 40.0%
CTTTCCCAGGTCCATTAAAA+GGG - chr2.2:27221401-27221420 None:intergenic 40.0%
GAATTGACCAAAATACCCCT+GGG - chr2.2:27219695-27219714 None:intergenic 40.0%
GATATTGAGCGGTGTAAGAT+TGG + chr2.2:27218396-27218415 MS.gene043855:intron 40.0%
GGAGAAAAACCAATTGACAG+AGG - chr2.2:27221142-27221161 None:intergenic 40.0%
GGGAAAATAGGTGAACATGT+TGG + chr2.2:27221450-27221469 MS.gene043855:CDS 40.0%
GTAACTTGGATGGTCAGTTA+TGG + chr2.2:27221502-27221521 MS.gene043855:CDS 40.0%
GTACCTGAAACTTGATCCAT+TGG - chr2.2:27216980-27216999 None:intergenic 40.0%
GTCCAAAGGAAAAGGGTAAT+TGG + chr2.2:27221964-27221983 MS.gene043855:CDS 40.0%
GTGAATGTTCCTCCAAACAT+TGG - chr2.2:27221354-27221373 None:intergenic 40.0%
GTTTCACTTGACAAGGAGAA+AGG - chr2.2:27217451-27217470 None:intergenic 40.0%
TAAACCACAGGTCTTTGTGT+CGG - chr2.2:27221615-27221634 None:intergenic 40.0%
TCAGGATGCAAGTATAGGAA+TGG - chr2.2:27221102-27221121 None:intergenic 40.0%
TCATGGCAATTCAAGCAATG+GGG + chr2.2:27216939-27216958 MS.gene043855:CDS 40.0%
TCTGACACACATGACTTTGT+TGG - chr2.2:27220836-27220855 None:intergenic 40.0%
TGACACACATGACTTTGTTG+GGG - chr2.2:27220834-27220853 None:intergenic 40.0%
TTAAACGCCGTCTATTTGCA+GGG + chr2.2:27219835-27219854 MS.gene043855:intron 40.0%
TTTAAACGCCGTCTATTTGC+AGG + chr2.2:27219834-27219853 MS.gene043855:intron 40.0%
! ATTGGGAGCATGTGACATTA+AGG + chr2.2:27221475-27221494 MS.gene043855:CDS 40.0%
! CCCAACAACAAACCTCTTTT+TGG + chr2.2:27220613-27220632 MS.gene043855:CDS 40.0%
! CTAACAATGATGGTGCCTAT+TGG + chr2.2:27221244-27221263 MS.gene043855:CDS 40.0%
! GGAGCGTTACTATACAAGAA+AGG + chr2.2:27221165-27221184 MS.gene043855:CDS 40.0%
! TTGGGAGCATGTGACATTAA+GGG + chr2.2:27221476-27221495 MS.gene043855:CDS 40.0%
!! AAAGAGGTTTGTTGTTGGGT+TGG - chr2.2:27220612-27220631 None:intergenic 40.0%
!! AACTCTACTTTTGCTTTCCC+AGG - chr2.2:27221414-27221433 None:intergenic 40.0%
!! AGGTGAACATGTTGGTGATT+GGG + chr2.2:27221458-27221477 MS.gene043855:CDS 40.0%
!! ATTTTGCTAATCTGGTGACG+TGG + chr2.2:27219722-27219741 MS.gene043855:intron 40.0%
!! CCATTTTGTGCTATTGCAAC+AGG - chr2.2:27221204-27221223 None:intergenic 40.0%
!! GCAGTGATTAAGTTGGTCAA+AGG + chr2.2:27219744-27219763 MS.gene043855:intron 40.0%
!! GCAGTGATTAAGTTGGTCAA+AGG - chr2.2:27219763-27219744 None:intergenic 40.0%
!! GGTTTACCAAAAGAAGTGCT+GGG + chr2.2:27221924-27221943 MS.gene043855:CDS 40.0%
!! TAGGTGAACATGTTGGTGAT+TGG + chr2.2:27221457-27221476 MS.gene043855:CDS 40.0%
!! TCTACCCTTTTAATGGACCT+GGG + chr2.2:27221394-27221413 MS.gene043855:CDS 40.0%
!! TTCTACCCTTTTAATGGACC+TGG + chr2.2:27221393-27221412 MS.gene043855:CDS 40.0%
!!! AAATTAGCCCAGGGGTATTT+TGG + chr2.2:27219685-27219704 MS.gene043855:intron 40.0%
AACAGGTAGGTCAAGCCAAT+AGG - chr2.2:27221262-27221281 None:intergenic 45.0%
AAGACTCACATTGCTCTGTG+AGG - chr2.2:27220864-27220883 None:intergenic 45.0%
ACCAACAGGTCCAAAGGAAA+AGG + chr2.2:27221956-27221975 MS.gene043855:CDS 45.0%
ATTGAACACTGCATCCGTCA+CGG + chr2.2:27220711-27220730 MS.gene043855:CDS 45.0%
CATGCATCATATCCACATGC+TGG + chr2.2:27221651-27221670 MS.gene043855:CDS 45.0%
CATGGCAATTCAAGCAATGG+GGG + chr2.2:27216940-27216959 MS.gene043855:CDS 45.0%
CATTGTTAGGATCCTGAGGA+AGG - chr2.2:27221233-27221252 None:intergenic 45.0%
CCAACAGGTCCAAAGGAAAA+GGG + chr2.2:27221957-27221976 MS.gene043855:CDS 45.0%
CCAGGGGGTTATTAAAGACA+AGG - chr2.2:27218886-27218905 None:intergenic 45.0%
CCATCATTGTTAGGATCCTG+AGG - chr2.2:27221237-27221256 None:intergenic 45.0%
CCTCAGGATCCTAACAATGA+TGG + chr2.2:27221234-27221253 MS.gene043855:CDS 45.0%
CCTTGTCTTTAATAACCCCC+TGG + chr2.2:27218883-27218902 MS.gene043855:intron 45.0%
CTGAAGTTAAAGAGCCAGCA+TGG + chr2.2:27221784-27221803 MS.gene043855:CDS 45.0%
CTTGTGTTGTGGTGACAACA+AGG - chr2.2:27220801-27220820 None:intergenic 45.0%
GACACACATGACTTTGTTGG+GGG - chr2.2:27220833-27220852 None:intergenic 45.0%
GACCTGTGGTTTATGCTTCT+CGG + chr2.2:27221622-27221641 MS.gene043855:CDS 45.0%
GCAAACGCAGTCATGAATCT+AGG + chr2.2:27220451-27220470 MS.gene043855:CDS 45.0%
GCACAAACTTCTTCGAGTGA+AGG + chr2.2:27220325-27220344 MS.gene043855:CDS 45.0%
GCACCAATGGATCAAGTTTC+AGG + chr2.2:27216974-27216993 MS.gene043855:CDS 45.0%
GCTTGAATGTGTGGTCAATG+GGG - chr2.2:27220297-27220316 None:intergenic 45.0%
GCTTTCCCAGGTCCATTAAA+AGG - chr2.2:27221402-27221421 None:intergenic 45.0%
GGAAGGTTTGTCTTGTGTTG+TGG - chr2.2:27220812-27220831 None:intergenic 45.0%
GGAATTGACCAAAATACCCC+TGG - chr2.2:27219696-27219715 None:intergenic 45.0%
GGTACCTTCGTTGCTCAAAA+TGG + chr2.2:27220970-27220989 MS.gene043855:CDS 45.0%
GTTTCACCCCTGCAAATAGA+CGG - chr2.2:27219845-27219864 None:intergenic 45.0%
TAAACGCCGTCTATTTGCAG+GGG + chr2.2:27219836-27219855 MS.gene043855:intron 45.0%
TATCCATAAGTCAGTCCCGT+TGG - chr2.2:27220568-27220587 None:intergenic 45.0%
TGACGTGGCAGTGATTAAGT+TGG + chr2.2:27219737-27219756 MS.gene043855:intron 45.0%
TGACGTGGCAGTGATTAAGT+TGG - chr2.2:27219756-27219737 None:intergenic 45.0%
TGTGTTTCACCCCTGCAAAT+AGG + chr2.2:27219303-27219322 MS.gene043855:intron 45.0%
TTAAACGCGGCCTATTTGCA+GGG - chr2.2:27219316-27219335 None:intergenic 45.0%
TTGGCTGTAGCTTCCTAACA+TGG - chr2.2:27220593-27220612 None:intergenic 45.0%
TTTAAACGCGGCCTATTTGC+AGG - chr2.2:27219317-27219336 None:intergenic 45.0%
! CTCACCATTTTGAGCAACGA+AGG - chr2.2:27220977-27220996 None:intergenic 45.0%
! GGGTTTACCAAAAGAAGTGC+TGG + chr2.2:27221923-27221942 MS.gene043855:CDS 45.0%
! TTTTCCGACACAAAGACCTG+TGG + chr2.2:27221608-27221627 MS.gene043855:CDS 45.0%
!! ATGCTGGCCTTCATCTACTA+GGG + chr2.2:27221667-27221686 MS.gene043855:CDS 45.0%
!!! CCCATGCCATTTTGCTAATC+TGG + chr2.2:27219714-27219733 MS.gene043855:intron 45.0%
!! AATTCAAAAATAAATAAAAA+TGG - chr2.2:27217015-27217034 None:intergenic 5.0%
!! TAAATAAATAAATAAAGATA+TGG - chr2.2:27217081-27217100 None:intergenic 5.0%
!!! ATTTTGAAATTTTTTTTTTA+AGG + chr2.2:27219655-27219674 MS.gene043855:intron 5.0%
!!! ATTTTTATTTATTTTTGAAT+TGG + chr2.2:27217014-27217033 MS.gene043855:intron 5.0%
!!! TTTTTTTATGAAAAAAAATA+TGG + chr2.2:27219202-27219221 MS.gene043855:intron 5.0%
AGTAGATGAAGGCCAGCATG+TGG - chr2.2:27221666-27221685 None:intergenic 50.0%
CACATGACTTTGTTGGGGGA+AGG - chr2.2:27220829-27220848 None:intergenic 50.0%
CATGACTGCGTTTGCGAAAC+TGG - chr2.2:27220446-27220465 None:intergenic 50.0%
CGCCTCAGTGTATGAACCAA+CGG + chr2.2:27220549-27220568 MS.gene043855:CDS 50.0%
CTTTGCAAGGGCAATTTGCC+AGG + chr2.2:27219788-27219807 MS.gene043855:intron 50.0%
CTTTGCAAGGGCAATTTGCC+AGG - chr2.2:27219807-27219788 None:intergenic 50.0%
GCCTCAGTGTATGAACCAAC+GGG + chr2.2:27220550-27220569 MS.gene043855:CDS 50.0%
GGAGTCTTGATCAACCGTGA+CGG - chr2.2:27220728-27220747 None:intergenic 50.0%
GTCCTTGCAATCGCTAATCC+TGG + chr2.2:27219342-27219361 MS.gene043855:intron 50.0%
GTCCTTGCAATCGCTAATCC+TGG - chr2.2:27219361-27219342 None:intergenic 50.0%
GTGGTTTATGCTTCTCGGCA+TGG + chr2.2:27221627-27221646 MS.gene043855:CDS 50.0%
TAAACGCGGCCTATTTGCAG+GGG - chr2.2:27219315-27219334 None:intergenic 50.0%
TGACAACAAGGCCTACAGCA+TGG - chr2.2:27220789-27220808 None:intergenic 50.0%
TGATCCATTGGTGCAGCTGT+AGG - chr2.2:27216968-27216987 None:intergenic 50.0%
TGGCTACCAATAGCACCTGA+TGG + chr2.2:27220760-27220779 MS.gene043855:CDS 50.0%
! CCCTTTTCCTTTGGACCTGT+TGG - chr2.2:27221960-27221979 None:intergenic 50.0%
! GAACCAACGGGACTGACTTA+TGG + chr2.2:27220562-27220581 MS.gene043855:CDS 50.0%
! TCCTCTCCCAGCACTTCTTT+TGG - chr2.2:27221933-27221952 None:intergenic 50.0%
! TGCCAGGATTAGCGATTGCA+AGG + chr2.2:27219804-27219823 MS.gene043855:intron 50.0%
! TGCCAGGATTAGCGATTGCA+AGG - chr2.2:27219823-27219804 None:intergenic 50.0%
! TGCCGAGAAGCATAAACCAC+AGG - chr2.2:27221627-27221646 None:intergenic 50.0%
! TGGTAGCCATCAGGTGCTAT+TGG - chr2.2:27220769-27220788 None:intergenic 50.0%
!! AAAGAAGTGCTGGGAGAGGA+AGG + chr2.2:27221933-27221952 MS.gene043855:CDS 50.0%
!! ACCAAAAGAAGTGCTGGGAG+AGG + chr2.2:27221929-27221948 MS.gene043855:CDS 50.0%
!! CATGCTGGCCTTCATCTACT+AGG + chr2.2:27221666-27221685 MS.gene043855:CDS 50.0%
!! TCCCGTTGGTTCATACACTG+AGG - chr2.2:27220554-27220573 None:intergenic 50.0%
CCTACAGCATGGTAGCCATC+AGG - chr2.2:27220778-27220797 None:intergenic 55.0%
CCTGATGGCTACCATGCTGT+AGG + chr2.2:27220775-27220794 MS.gene043855:CDS 55.0%
GGAAGGACCAACAGGTCCAA+AGG + chr2.2:27221950-27221969 MS.gene043855:CDS 55.0%
GGTTCCTACAGCTGCACCAA+TGG + chr2.2:27216961-27216980 MS.gene043855:CDS 55.0%
! AAAGTTTGGGGCGCCTACGA+AGG + chr2.2:27220508-27220527 MS.gene043855:CDS 55.0%
! AAGGTACCAACGCGAACACC+GGG - chr2.2:27220958-27220977 None:intergenic 55.0%
!! GAAGGTACCAACGCGAACAC+CGG - chr2.2:27220959-27220978 None:intergenic 55.0%
AAAGCTCCCGGTGTTCGCGT+TGG + chr2.2:27220949-27220968 MS.gene043855:CDS 60.0%
ATCGTCCGGTCCACCTTCGT+AGG - chr2.2:27220524-27220543 None:intergenic 60.0%
CTGGGAGAGGAAGGACCAAC+AGG + chr2.2:27221942-27221961 MS.gene043855:CDS 60.0%
GAAGGTGGACCGGACGATCA+AGG + chr2.2:27220526-27220545 MS.gene043855:CDS 60.0%
TGTGGTCAATGGGGCGAGAG+CGG - chr2.2:27220288-27220307 None:intergenic 60.0%
! ACTGAGGCGCCTTGATCGTC+CGG - chr2.2:27220538-27220557 None:intergenic 60.0%
GTGGTCAATGGGGCGAGAGC+GGG - chr2.2:27220287-27220306 None:intergenic 65.0%
! GTTTGGGGCGCCTACGAAGG+TGG + chr2.2:27220511-27220530 MS.gene043855:CDS 65.0%
GGGCGCCTACGAAGGTGGAC+CGG + chr2.2:27220516-27220535 MS.gene043855:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 27216896 27222004 27216896 ID=MS.gene043855
chr2.2 mRNA 27216896 27222004 27216896 ID=MS.gene043855.t1;Parent=MS.gene043855
chr2.2 exon 27216896 27216995 27216896 ID=MS.gene043855.t1.exon1;Parent=MS.gene043855.t1
chr2.2 CDS 27216896 27216995 27216896 ID=cds.MS.gene043855.t1;Parent=MS.gene043855.t1
chr2.2 exon 27220248 27222004 27220248 ID=MS.gene043855.t1.exon2;Parent=MS.gene043855.t1
chr2.2 CDS 27220248 27222004 27220248 ID=cds.MS.gene043855.t1;Parent=MS.gene043855.t1
Gene Sequence

>MS.gene043855

ATGGGCATGAATGTGGGGATTCTTTGTGTTTGTGTTGTGCTTTTCATGGCAATTCAAGCAATGGGGGTTCCTACAGCTGCACCAATGGATCAAGTTTCAGGTACTTTTTTTCTGTGCCATTTTTATTTATTTTTGAATTGGCAAGTATTATTAAGGTAAACATGCACAAGACGCCATTGTTACCATATCTTTATTTATTTATTTATTTGCTAAATGTTTTTCTTGGAGAAAGCCACAAAATAATTAGAAAAAATAGGTATGTACCATTTGGGATGTAAGGTGAAAAAACCATACGTACAAAGAATACGACAGTGATAAAATGAGTCATTGATATATTATAGTTGAACAAAATGGTGTAGAGAATCCTTCAAAAAAAATGGTGTAGAGAACTTAATTGGCGATCAATGCGTTAAGAAGTTAATTTACGTGTACTTGCTCCATACATTTTGTTGCAGCTTCTCGCATATTATTACGTTACGTACATCGTTTTCTTTCTTTTCACGGGAACAAATTATTATATTGTTAAAACTTACACATCCAAATAATCTGGTTCCTTTCTCCTTGTCAAGTGAAACTATGAAATTGTCATTTTTTGTTAGAAATTTAAGACTTGTTTGATGTTCAGGATAAAATAAAATTGACTTAATTAAAGTTTATGCAATTTTGAACCTCTTTAATATCAATAGAACAATTTTGATCCTTTTAGTTTTAAAATTGTACGATTTTGAACCCTAACTTTAGTTGAGCAATTTTTGTCTCTCAACTTTAACATTTTTTTTTATTTTTTTTTATGGTCCTCACAAATTTTAAAACCTAATTTTATTTTGTCACACATATTTTGACCAAATTTTGACTAAATTATGATGATGTAGAAAATTTATTTAATGGAAAATTTATATATATTAAATCTTTCATATTTATCATTTTTTTAATATATAAATTTTCGTTGAATAAAAATGCAATATGTTTGTGACAAAATTTAAAAATGGTGTACCATTTATTACATTTTAGATTTTTAAATTGTGCATATTTTAGCAATCATATTTATTATATGCAAACTATGCAATATTTTTATATTTATATCAAATTAATTTCATCATACAATTGAATTTATAAGTGTCATTGTCATCTCTTAAAACATATAAAAATAATATTATATATTGATATTTATATTGTAAAAAAATTTGTATATACTAAATATTCATTAATACATTTTTTTATTATTTTTAATAAACGTGTATGTGGAATTAGTCAAATATTTTTATTTAAATAATAATTTAAATAAAATGGTAATATACAAGTCAGAAAATGAGTCAACTAGAGGTCAAAGTCACACGATTGAAAAACTATGGCGGTCAAAAGTGAAATTAAGTCAATAAAATTGTATAAGTTTTTGTTACCTACTATTTAGATTTACATAAAAAATTTAAATGAATGATCTATGTGATATAACCTTACAATCCAACAGTCAAATTTAAAAAAATATGTTTTGAATAAAACGATATTGAGCGGTGTAAGATTGGTGTAATATTATATCGGTGTAATTTGATCTTTCCTATACATAAAGGAGGGATCAAATTACAATAAGTAATGTTATACCAATGTTAGACCGCTTAATATCGTTTTACTCGATTCATATTTTTTAAATTTGACTGTTGAATTGTAAGTTTATAATATTCAGATCATCGGTGTAAATTTTTTAATGAATCTGAAATCATTTGATTTGCTATTGAGACCCATCAAAATTAGTGGTTTATTCGCTTTTATATCACATCGTTAATCTTTGTAATTCTCAAAACCATATCAAATGATTTTAGATTGGTATAAATTTTACATGCATGATTTATATGATATAAATGTAAAATCTCACGGTGAAATTTCAAAAATATGAATCGAATAAAACTATATTGAGCGGTGTAACTTACTTCAATTTAAAAAGATGAAAGTGTAAGTTAGCAACCATACTCACTTTTTTTTACTAAAAACCCCTTGTCTTTAATAACCCCCTGGTATAATTTGTTTTCGTTAAAAATATTGTTTTTTTAATGCTACAACACAGTTTATTTTTTATTTTTTTGAGGTGTACATCACAGTTTATGTTTCTCGTCCTTTTCCTTAACTTCAATTAAACCCTTCTCCCAACAACATATAAGACCAAAGTACGAGTTTTTTCTAAGTTTTAGTTTTATATGCTACCCGTTTTCTAAACTAATTCATCATCCTTTTTTATTGGTGTGAACTTCTTTCTGCCAAAAAAGAAATATTGGTTTTAACTTCTAGATATCGATTTTATGAAACATGGCGTGTTTTTTTATGAAAAAAAATATGGTCCATACAAAATAACTTGATATTTATTTCCAAAAAATATAACTTGATATTTGTGCAAGTTTTATTTTAGGCTTAATAGTGTGTTTCACCCCTGCAAATAGGCCGCGTTTAAAAATTGGTCCTTGCAATCGCTAATCCTGGCAAATTGCCCTTGCAAAGTTTAATCATTTAAAATTTCGTCCTTTGACCAACTTAATCACTGCCACGTCATCAAATTAACAAAATGGCATGCGAATTGACGAAAATACCCCTGACTTATTTTTTTTTTGTTTTTTTTTTCCTTCAAAAGAAAAATTCAGTTTTTTCCCGAATTTTTTTTACGATTTTTTCCCGAAAATTTTTCAGTTTTAATTTAACAGTTTTTTTCCGAAATTTTTTTTGACTTTTAATTATTTTTTTCAGATTTTTTTAATTTAAAATAAATTTTCAAAATTTTGAAATTTTTTTTTTAAGGAAAAAAAAAATTAGCCCAGGGGTATTTTGGTCAATTCCCATGCCATTTTGCTAATCTGGTGACGTGGCAGTGATTAAGTTGGTCAAAGGACGAAATTTTAAATGATTAAACTTTGCAAGGGCAATTTGCCAGGATTAGCGATTGCAAGGACCAATTTTTAAACGCCGTCTATTTGCAGGGGTGAAACACACCATTAAGCCTTTATTTTACTACTGTATGCACTTTGATAACGAGTACTTTTTTTGCATGAGTTTTTTCCCTTGTGATAACGAGTACTTTTTTTGCATGAGTTTTTTCCCTTGTGTTGATAAAAAATTTGGCAAATACAATGATGATTAATTTCATAACCACAAGATTTCCCTAGAAGATTAATTTTAAGGTGTCTCATAGATGCTTACCCTGAATTAGATTCACATTGAGAACTATGCTTATAAACACTCCTCGACTTAAAAGTTGATTTTATAAGAATTAGTTAGATATAATTTATGAACTTAATAATTGTAAAATCATCTCATTCTCATTGCATTAACACATTATGTAAATTGTCTTACAACATGTTTTCATTTGCAGAGAATAAGAATGTCTTCAAGAAAAAGAGACATGTATCCCGCTCTCGCCCCATTGACCACACATTCAAGCTTCCTATTGCACAAACTTCTTCGAGTGAAGGTATTGTTTATGTGATTTCAATTTTCTGTCCTCTTGTAATACATTATAGTGAATGCAGGCTAACTGTAGCAAGTGTTGAATTGCAACATACAGGTACCAGTTTCGCAAACGCAGTCATGAATCTAGGTGAGCTGCATGTGATGCAAGCATCAACATTCAGCAAAGTTTGGGGCGCCTACGAAGGTGGACCGGACGATCAAGGCGCCTCAGTGTATGAACCAACGGGACTGACTTATGGATACTCCATGTTAGGAAGCTACAGCCAACCCAACAACAAACCTCTTTTTGGATATGTTCTTGTAGCAAAGGATATTTCAGGAAAGAGCAATGGCACTTTAAAGCCACCTGTTGATTACTCACTAGTATTGAACACTGCATCCGTCACGGTTGATCAAGACTCCCCTTTGTATATTTGGCTACCAATAGCACCTGATGGCTACCATGCTGTAGGCCTTGTTGTCACCACAACACAAGACAAACCTTCCCCCAACAAAGTCATGTGTGTCAGATCAGACCTCACAGAGCAATGTGAGTCTTCTACATGGATTTGGGGATCAAACGACATAAATTTCTATGATGTTAGACCAATCAATAGAGGAACTAAAGCTCCCGGTGTTCGCGTTGGTACCTTCGTTGCTCAAAATGGTGAGAATACCAACCCTCCATCAATTTCATGTTTGAAAAATCTCAATGAAATTTCACAAATCATGCCTAATCTAACACAACTTGAGACAATACTCCACTCTTACTCTCCATTCCTATACTTGCATCCTGATGAAGAATACTTACCTTCCTCTGTCAATTGGTTTTTCTCCAATGGAGCGTTACTATACAAGAAAGGTGAAGAATCAAATCCTGTTGCAATAGCACAAAATGGTACTAACCTTCCTCAGGATCCTAACAATGATGGTGCCTATTGGCTTGACCTACCTGTTGATGATGCAAATAAAGAAAGGGTCAAGCAAGGTAATTTACAAAGTGCAGAATCTTATGTACATGTGAAACCAATGTTTGGAGGAACATTCACTGATATTGCCATGTGGATTTTCTACCCTTTTAATGGACCTGGGAAAGCAAAAGTAGAGTTCATAAATTTGAAGTTAGGGAAAATAGGTGAACATGTTGGTGATTGGGAGCATGTGACATTAAGGGTAAGTAACTTGGATGGTCAGTTATGGCATGTCTATTTCTCTCAACATAATGGTGGTTCATGGCTTGATGCATCTCAACTTGAGTTTCAAACTGATAATAGCAGTTTTGATTTTCCGACACAAAGACCTGTGGTTTATGCTTCTCGGCATGGTCATGCATCATATCCACATGCTGGCCTTCATCTACTAGGGAAAAATGGAGTAGGTGCAAGAGATGATACTGATAAAGGTAGCAATGTTATGGATATGGGAAAATATGTATTGGTTTCTGCAGAGTATTTGGAGTCTGAAGTTAAAGAGCCAGCATGGTTGAATTTTTTTAGGGAGTGGGGTCCACATATTGACTATAGTCTAGATGATGAGTTGAAGAATGTTGAGAAGTTATTGCCTGGGAAATTAAAAGATGTTTTTGAAAAAATTATTATGGGTTTACCAAAAGAAGTGCTGGGAGAGGAAGGACCAACAGGTCCAAAGGAAAAGGGTAATTGGAATGGTGATGAATTTTGA
Protein sequence

>MS.gene043855.t1

MGMNVGILCVCVVLFMAIQAMGVPTAAPMDQVSENKNVFKKKRHVSRSRPIDHTFKLPIAQTSSSEGIVYVISIFCPLVIHYSECRLTVASVELQHTGTSFANAVMNLGELHVMQASTFSKVWGAYEGGPDDQGASVYEPTGLTYGYSMLGSYSQPNNKPLFGYVLVAKDISGKSNGTLKPPVDYSLVLNTASVTVDQDSPLYIWLPIAPDGYHAVGLVVTTTQDKPSPNKVMCVRSDLTEQCESSTWIWGSNDINFYDVRPINRGTKAPGVRVGTFVAQNGENTNPPSISCLKNLNEISQIMPNLTQLETILHSYSPFLYLHPDEEYLPSSVNWFFSNGALLYKKGEESNPVAIAQNGTNLPQDPNNDGAYWLDLPVDDANKERVKQGNLQSAESYVHVKPMFGGTFTDIAMWIFYPFNGPGKAKVEFINLKLGKIGEHVGDWEHVTLRVSNLDGQLWHVYFSQHNGGSWLDASQLEFQTDNSSFDFPTQRPVVYASRHGHASYPHAGLHLLGKNGVGARDDTDKGSNVMDMGKYVLVSAEYLESEVKEPAWLNFFREWGPHIDYSLDDELKNVEKLLPGKLKDVFEKIIMGLPKEVLGEEGPTGPKEKGNWNGDEF