Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061203.t1 | AES92588.1 | 96.2 | 586 | 22 | 0 | 1 | 586 | 1 | 586 | 0.00E+00 | 1180.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061203.t1 | G7JI01 | 96.2 | 586 | 22 | 0 | 1 | 586 | 1 | 586 | 0.0e+00 | 1180.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061203 | MS.gene005092 | PPI |
| MS.gene061203 | MS.gene042258 | PPI |
| MS.gene061203 | MS.gene042257 | PPI |
| MS.gene061203 | MS.gene043859 | PPI |
| MS.gene061203 | MS.gene036431 | PPI |
| MS.gene061203 | MS.gene000193 | PPI |
| MS.gene061203 | MS.gene52616 | PPI |
| MS.gene061203 | MS.gene043858 | PPI |
| MS.gene061203 | MS.gene000191 | PPI |
| MS.gene061203 | MS.gene60881 | PPI |
| MS.gene043858 | MS.gene061203 | PPI |
| MS.gene061203 | MS.gene036433 | PPI |
| MS.gene061203 | MS.gene60886 | PPI |
| MS.gene60886 | MS.gene061203 | PPI |
| MS.gene061203 | MS.gene60889 | PPI |
| MS.gene061203 | MS.gene000192 | PPI |
| MS.gene061203 | MS.gene005095 | PPI |
| MS.gene061203 | MS.gene000190 | PPI |
| MS.gene061203 | MS.gene33537 | PPI |
| MS.gene061203 | MS.gene52609 | PPI |
| MS.gene061203 | MS.gene043855 | PPI |
| MS.gene061203 | MS.gene60883 | PPI |
| MS.gene061203 | MS.gene60884 | PPI |
| MS.gene061203 | MS.gene60888 | PPI |
| MS.gene061203 | MS.gene012606 | PPI |
| MS.gene60883 | MS.gene061203 | PPI |
| MS.gene061203 | MS.gene60887 | PPI |
| MS.gene061203 | MS.gene43969 | PPI |
| MS.gene061203 | MS.gene005097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061203.t1 | MTR_4g131710 | 96.246 | 586 | 22 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1174 |
| MS.gene061203.t1 | MTR_2g062410 | 74.320 | 588 | 141 | 4 | 3 | 586 | 5 | 586 | 0.0 | 891 |
| MS.gene061203.t1 | MTR_2g062370 | 71.332 | 593 | 160 | 4 | 1 | 586 | 1 | 590 | 0.0 | 861 |
| MS.gene061203.t1 | MTR_2g062430 | 70.833 | 552 | 150 | 2 | 35 | 586 | 13 | 553 | 0.0 | 827 |
| MS.gene061203.t1 | MTR_2g062380 | 69.466 | 524 | 157 | 2 | 63 | 586 | 40 | 560 | 0.0 | 778 |
| MS.gene061203.t1 | MTR_2g067640 | 56.443 | 551 | 206 | 10 | 46 | 586 | 15 | 541 | 0.0 | 618 |
| MS.gene061203.t1 | MTR_2g062340 | 50.987 | 557 | 215 | 11 | 38 | 585 | 9 | 516 | 0.0 | 548 |
| MS.gene061203.t1 | MTR_1g080370 | 44.283 | 551 | 276 | 10 | 51 | 585 | 23 | 558 | 1.90e-163 | 478 |
| MS.gene061203.t1 | MTR_1g080410 | 44.283 | 551 | 276 | 10 | 51 | 585 | 23 | 558 | 1.90e-163 | 478 |
| MS.gene061203.t1 | MTR_5g007860 | 42.933 | 566 | 289 | 9 | 43 | 585 | 51 | 605 | 1.05e-159 | 470 |
| MS.gene061203.t1 | MTR_4g077620 | 43.950 | 562 | 280 | 13 | 44 | 585 | 21 | 567 | 1.14e-156 | 461 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061203.t1 | AT2G44260 | 51.730 | 549 | 250 | 6 | 39 | 585 | 17 | 552 | 0.0 | 592 |
| MS.gene061203.t1 | AT2G44230 | 51.259 | 556 | 250 | 7 | 35 | 586 | 4 | 542 | 0.0 | 587 |
| MS.gene061203.t1 | AT2G44260 | 52.952 | 525 | 232 | 6 | 63 | 585 | 71 | 582 | 0.0 | 578 |
| MS.gene061203.t1 | AT3G01870 | 43.655 | 591 | 302 | 10 | 8 | 585 | 11 | 583 | 4.57e-169 | 493 |
| MS.gene061203.t1 | AT3G01880 | 45.848 | 554 | 273 | 10 | 42 | 585 | 53 | 589 | 6.63e-166 | 485 |
| MS.gene061203.t1 | AT5G18490 | 44.891 | 548 | 270 | 10 | 51 | 586 | 25 | 552 | 3.11e-164 | 479 |
| MS.gene061203.t1 | AT3G04350 | 43.784 | 555 | 279 | 10 | 51 | 586 | 26 | 566 | 4.23e-161 | 472 |
| MS.gene061203.t1 | AT3G04350 | 43.194 | 551 | 280 | 10 | 55 | 586 | 8 | 544 | 2.08e-156 | 459 |
| MS.gene061203.t1 | AT5G43950 | 42.238 | 554 | 290 | 11 | 50 | 585 | 23 | 564 | 9.16e-151 | 446 |
| MS.gene061203.t1 | AT1G04090 | 43.137 | 561 | 281 | 14 | 50 | 585 | 23 | 570 | 1.24e-150 | 446 |
Find 124 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAACGTTTAACAAAATT+TGG | 0.066286 | 8.2:-3440255 | MS.gene061203:CDS |
| CAAAATTGCTAGTATCATTT+TGG | 0.131465 | 8.2:+3439156 | None:intergenic |
| CGAAATTTCTTCGTCGATTT+GGG | 0.192513 | 8.2:-3439870 | MS.gene061203:CDS |
| GCGAAATTTCTTCGTCGATT+TGG | 0.194682 | 8.2:-3439871 | MS.gene061203:CDS |
| GACATTAAGGGTAAGTAATT+TGG | 0.218905 | 8.2:-3439252 | MS.gene061203:CDS |
| GCTTGAGTTCCTCTACTTAT+TGG | 0.237504 | 8.2:+3439815 | None:intergenic |
| TCCTCTTGCAACATTTCTTT+TGG | 0.247710 | 8.2:+3438810 | None:intergenic |
| GTAATTTGGATGGTAAATTA+TGG | 0.253190 | 8.2:-3439238 | MS.gene061203:CDS |
| TGATCTTTGAAATGGAATTA+AGG | 0.258367 | 8.2:+3439714 | None:intergenic |
| TTCCAACTGCAACTACTTCT+TGG | 0.267862 | 8.2:-3440440 | MS.gene061203:CDS |
| ATCAACGTTTAACAAAATTT+GGG | 0.287048 | 8.2:-3440254 | MS.gene061203:CDS |
| ACTGGGAGCATGTGACATTA+AGG | 0.288797 | 8.2:-3439265 | MS.gene061203:CDS |
| AAGTAACAAAGTTATGGATA+TGG | 0.311164 | 8.2:-3439015 | MS.gene061203:CDS |
| CAAAATTTGAGTAGCTGAAT+AGG | 0.318702 | 8.2:+3440021 | None:intergenic |
| CAATAGGCGCGGTCATGTTT+AGG | 0.320126 | 8.2:+3439497 | None:intergenic |
| CTAAACATGACCGCGCCTAT+TGG | 0.333364 | 8.2:-3439496 | MS.gene061203:CDS |
| AAATTGAAGAAGTTGTTTCT+AGG | 0.346682 | 8.2:-3438873 | MS.gene061203:CDS |
| CATGCTGGCCTTGTTCTACT+AGG | 0.347802 | 8.2:-3439074 | MS.gene061203:CDS |
| GCTTTAATTTGTTGTAGATT+AGG | 0.348824 | 8.2:+3439689 | None:intergenic |
| CCAAATGGCTACCGTGCTTT+AGG | 0.353128 | 8.2:-3439971 | MS.gene061203:CDS |
| GCGCGGTCATGTTTAGGATT+AGG | 0.354023 | 8.2:+3439503 | None:intergenic |
| CTGATCATACAAACAAAGAT+AGG | 0.360712 | 8.2:-3439460 | MS.gene061203:CDS |
| TCCTAGAGCAGCTGCACAAA+TGG | 0.376330 | 8.2:-3442755 | MS.gene061203:CDS |
| AATACAAATGTGTAATCAAT+TGG | 0.386535 | 8.2:+3440055 | None:intergenic |
| CCTAGACCAATAGCACAAAA+TGG | 0.392047 | 8.2:-3439545 | MS.gene061203:CDS |
| CCTAAAGCACGGTAGCCATT+TGG | 0.392578 | 8.2:+3439971 | None:intergenic |
| ATTAGGCATGATCTTTGAAA+TGG | 0.397170 | 8.2:+3439706 | None:intergenic |
| GGATATGGGGAAATATGTAT+TGG | 0.401878 | 8.2:-3439000 | MS.gene061203:CDS |
| GCACAAATGGGTCAAATTCC+AGG | 0.402115 | 8.2:-3442742 | MS.gene061203:intron |
| AGTAACAAAGTTATGGATAT+GGG | 0.402734 | 8.2:-3439014 | MS.gene061203:CDS |
| TGGTTTCTGCAGAGTATTTG+AGG | 0.402772 | 8.2:-3438980 | MS.gene061203:CDS |
| AGCTTGAATACGGTATCAAT+GGG | 0.415583 | 8.2:+3440462 | None:intergenic |
| CCTCAAGGATTCTCTATGTT+AGG | 0.416568 | 8.2:-3440172 | MS.gene061203:CDS |
| AAAATTTGGGGAGCCATTGA+TGG | 0.426406 | 8.2:-3440241 | MS.gene061203:CDS |
| TGGCTTTAATGTGCTCTTTG+TGG | 0.427124 | 8.2:+3440078 | None:intergenic |
| ACTTACCTTCATCAGTCAAT+TGG | 0.427526 | 8.2:-3439616 | MS.gene061203:CDS |
| AATTGAAGAAGTTGTTTCTA+GGG | 0.430110 | 8.2:-3438872 | MS.gene061203:CDS |
| GATGGTGGACCGGATGATAA+AGG | 0.432800 | 8.2:-3440223 | MS.gene061203:CDS |
| CTTGTATAGTAATGCTCCAT+TGG | 0.433338 | 8.2:+3439586 | None:intergenic |
| TGCAATGAAGCATGAACAAC+AGG | 0.439399 | 8.2:+3439116 | None:intergenic |
| TCTTTGTTTGTATGATCAGC+TGG | 0.440103 | 8.2:+3439464 | None:intergenic |
| CACATCATAAGACAGGTTCA+TGG | 0.444967 | 8.2:-3439202 | MS.gene061203:CDS |
| GCCTCAGTGTTCGAACCAAC+AGG | 0.448044 | 8.2:-3440199 | MS.gene061203:CDS |
| GCGAGAGGAGTCCTCGATCT+AGG | 0.448860 | 8.2:-3440298 | MS.gene061203:CDS |
| TCAGGATGTAGGTATAGAAA+TGG | 0.449014 | 8.2:+3439647 | None:intergenic |
| CGGTAGCCATTTGGAGCTAC+TGG | 0.451064 | 8.2:+3439980 | None:intergenic |
| TCTTCGTCGATTTGGGAATC+CGG | 0.451276 | 8.2:-3439863 | MS.gene061203:CDS |
| GTACATGTGAAACCAATGTT+TGG | 0.455920 | 8.2:-3439401 | MS.gene061203:CDS |
| TTGCAAGAGGAAGGACCAAC+AGG | 0.458852 | 8.2:-3438798 | MS.gene061203:CDS |
| GCAACTACTTCTTGGCCAAA+AGG | 0.466697 | 8.2:-3440432 | MS.gene061203:intron |
| AAGCTTGAATACGGTATCAA+TGG | 0.471010 | 8.2:+3440461 | None:intergenic |
| TGCAGTTGGAAGCTTGAATA+CGG | 0.472456 | 8.2:+3440452 | None:intergenic |
| AACCTTCCAGGTCCATTGAA+AGG | 0.472890 | 8.2:+3439341 | None:intergenic |
| ACCTTCCAGGTCCATTGAAA+GGG | 0.477333 | 8.2:+3439342 | None:intergenic |
| GTTGTTCATGCTTCATTGCA+TGG | 0.479910 | 8.2:-3439113 | MS.gene061203:CDS |
| GGTTTCTGCAGAGTATTTGA+GGG | 0.480067 | 8.2:-3438979 | MS.gene061203:CDS |
| TGTTTGTGTTGTGCTTCTCA+TGG | 0.488786 | 8.2:-3442788 | MS.gene061203:CDS |
| CCCATTTGTGCAGCTGCTCT+AGG | 0.491596 | 8.2:+3442754 | None:intergenic |
| ATCATCCGGTCCACCATCAA+TGG | 0.492503 | 8.2:+3440228 | None:intergenic |
| AAATGGTACTAACCTTCCTC+AGG | 0.498248 | 8.2:-3439528 | MS.gene061203:CDS |
| AATGTTAAATTAGAGAGAAT+AGG | 0.502401 | 8.2:-3439302 | MS.gene061203:CDS |
| CTGGGAGCATGTGACATTAA+GGG | 0.504616 | 8.2:-3439264 | MS.gene061203:CDS |
| AGCTGGTAGGTCTATCCAAT+AGG | 0.505188 | 8.2:+3439481 | None:intergenic |
| CTATAAAAGTTCAACCATGC+TGG | 0.506747 | 8.2:+3438942 | None:intergenic |
| GTCATAGAAATTGAAGTCTC+CGG | 0.508375 | 8.2:+3439844 | None:intergenic |
| AAAGAGGTTTGTTGTTGGGT+TGG | 0.517837 | 8.2:+3440140 | None:intergenic |
| CCTAGAGCAGCTGCACAAAT+GGG | 0.519510 | 8.2:-3442754 | MS.gene061203:CDS |
| GGGAGCCATTGATGGTGGAC+CGG | 0.519648 | 8.2:-3440233 | MS.gene061203:CDS |
| TAGGTGAACATGTTGGTGAC+TGG | 0.528649 | 8.2:-3439283 | MS.gene061203:CDS |
| TGTTGTGCTTCTCATGGCAA+TGG | 0.533813 | 8.2:-3442782 | MS.gene061203:CDS |
| TATTTCTCACATCATAAGAC+AGG | 0.534217 | 8.2:-3439209 | MS.gene061203:CDS |
| TGTTTGTATGATCAGCTGGT+AGG | 0.536283 | 8.2:+3439468 | None:intergenic |
| ACCAAAAGAAATGTTGCAAG+AGG | 0.544639 | 8.2:-3438811 | MS.gene061203:CDS |
| ACAAATGTGTAATCAATTGG+TGG | 0.545480 | 8.2:+3440058 | None:intergenic |
| GGAAGGACCAACAGGTCCAA+AGG | 0.546506 | 8.2:-3438790 | MS.gene061203:CDS |
| TTCAAACATGAAATAGATGG+AGG | 0.547187 | 8.2:+3439740 | None:intergenic |
| ACTGAGGCTCCTTTATCATC+CGG | 0.547432 | 8.2:+3440214 | None:intergenic |
| GTGAAGGTTCCTCCAAACAT+TGG | 0.547819 | 8.2:+3439389 | None:intergenic |
| AATCCTTGAGGTATTCCTGT+TGG | 0.552718 | 8.2:+3440184 | None:intergenic |
| GGCCAAGAAGTAGTTGCAGT+TGG | 0.554452 | 8.2:+3440438 | None:intergenic |
| TGGCTACCAGTAGCTCCAAA+TGG | 0.555141 | 8.2:-3439986 | MS.gene061203:CDS |
| GAATACGGTATCAATGGGGC+GGG | 0.557209 | 8.2:+3440467 | None:intergenic |
| AAAGAAATGTTGCAAGAGGA+AGG | 0.566876 | 8.2:-3438807 | MS.gene061203:CDS |
| GGAGCATTACTATACAAGAA+AGG | 0.567167 | 8.2:-3439581 | MS.gene061203:CDS |
| ATGCTGGCCTTGTTCTACTA+GGG | 0.569406 | 8.2:-3439073 | MS.gene061203:CDS |
| TCTAACTTATAGTCAACATG+TGG | 0.575589 | 8.2:+3438909 | None:intergenic |
| ATTTGGGGAGCCATTGATGG+TGG | 0.576760 | 8.2:-3440238 | MS.gene061203:CDS |
| CAAGCTCGAGGCATTCATGT+AGG | 0.578639 | 8.2:-3439797 | MS.gene061203:CDS |
| TGATCATACAAACAAAGATA+GGG | 0.582823 | 8.2:-3439459 | MS.gene061203:CDS |
| TAGGATTAGGACCCTGAGGA+AGG | 0.585115 | 8.2:+3439516 | None:intergenic |
| ACCCTTTCAATGGACCTGGA+AGG | 0.585334 | 8.2:-3439343 | MS.gene061203:CDS |
| CATTCAACATATCCACATGC+TGG | 0.585598 | 8.2:-3439089 | MS.gene061203:CDS |
| CAGCATGTGGATATGTTGAA+TGG | 0.587256 | 8.2:+3439090 | None:intergenic |
| TCAAACATGAAATAGATGGA+GGG | 0.594887 | 8.2:+3439741 | None:intergenic |
| TTAAGGGTAAGTAATTTGGA+TGG | 0.595987 | 8.2:-3439248 | MS.gene061203:CDS |
| AGGTGAACATGTTGGTGACT+GGG | 0.596607 | 8.2:-3439282 | MS.gene061203:CDS |
| ACAGGTAATGGTTTCGCGAG+AGG | 0.598849 | 8.2:-3440313 | MS.gene061203:intron |
| GTAACAAAGTTATGGATATG+GGG | 0.600950 | 8.2:-3439013 | MS.gene061203:CDS |
| TCAACGTTTAACAAAATTTG+GGG | 0.601243 | 8.2:-3440253 | MS.gene061203:CDS |
| ACGTTGATACTGTAGACACT+TGG | 0.605593 | 8.2:+3440269 | None:intergenic |
| GAGAGAATAGGTGAACATGT+TGG | 0.607765 | 8.2:-3439290 | MS.gene061203:CDS |
| AGAGGAGTCCTCGATCTAGG+TGG | 0.612378 | 8.2:-3440295 | MS.gene061203:CDS |
| GAGGAGTCCTCGATCTAGGT+GGG | 0.614351 | 8.2:-3440294 | MS.gene061203:CDS |
| CATGTGAAACCAATGTTTGG+AGG | 0.614379 | 8.2:-3439398 | MS.gene061203:CDS |
| AAATTTCGCATTTCTCTGTG+AGG | 0.618922 | 8.2:+3439885 | None:intergenic |
| CCACATTGCAAAATCAGTGA+AGG | 0.620887 | 8.2:+3439373 | None:intergenic |
| TGAATACGGTATCAATGGGG+CGG | 0.624090 | 8.2:+3440466 | None:intergenic |
| TGACGACATGGCCTAAAGCA+CGG | 0.634701 | 8.2:+3439960 | None:intergenic |
| GACGTTAGACCAATAAGTAG+AGG | 0.639362 | 8.2:-3439824 | MS.gene061203:CDS |
| GTAAAGTTAAAGAGCCAGCA+TGG | 0.641409 | 8.2:-3438956 | MS.gene061203:CDS |
| GTTTCTGCAGAGTATTTGAG+GGG | 0.641453 | 8.2:-3438978 | MS.gene061203:CDS |
| AGTAGAACAAGGCCAGCATG+TGG | 0.653698 | 8.2:+3439077 | None:intergenic |
| ACTGGTAGCCAAATATACAA+AGG | 0.659249 | 8.2:+3439998 | None:intergenic |
| AACAAAGATAGGGTCAAACA+AGG | 0.663777 | 8.2:-3439449 | MS.gene061203:CDS |
| CTTGGAGCCCACCTAGATCG+AGG | 0.667633 | 8.2:+3440287 | None:intergenic |
| GAACCAACAGGAATACCTCA+AGG | 0.672260 | 8.2:-3440187 | MS.gene061203:CDS |
| TCCTGTTGGTTCGAACACTG+AGG | 0.676070 | 8.2:+3440198 | None:intergenic |
| AGTAGAGGAACTCAAGCTCG+AGG | 0.676376 | 8.2:-3439809 | MS.gene061203:CDS |
| TGTTTAGGATTAGGACCCTG+AGG | 0.683877 | 8.2:+3439512 | None:intergenic |
| AATGGTACTAACCTTCCTCA+GGG | 0.693194 | 8.2:-3439527 | MS.gene061203:CDS |
| CCTAACATAGAGAATCCTTG+AGG | 0.700330 | 8.2:+3440172 | None:intergenic |
| CTAACTTATAGTCAACATGT+GGG | 0.708098 | 8.2:+3438910 | None:intergenic |
| GTAGGTCTATCCAATAGGCG+CGG | 0.731921 | 8.2:+3439486 | None:intergenic |
| GCTTGAATACGGTATCAATG+GGG | 0.743991 | 8.2:+3440463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTTAAATTGTTTTTTT+AGG | + | chr8.2:3439810-3439829 | None:intergenic | 10.0% |
| !!! | ACTTTTAAATTGTTTTTTTA+GGG | + | chr8.2:3439809-3439828 | None:intergenic | 10.0% |
| !! | ACACTATAATATATCATAAA+AGG | + | chr8.2:3441195-3441214 | None:intergenic | 15.0% |
| !! | TTAAAAAGATAGAATATTGT+TGG | + | chr8.2:3439046-3439065 | None:intergenic | 15.0% |
| !! | TTATATATAAGAAAAAAGTG+AGG | - | chr8.2:3440431-3440450 | MS.gene061203:intron | 15.0% |
| !!! | ATGTTTTTGAAAAAGTTATT+AGG | - | chr8.2:3442733-3442752 | MS.gene061203:intron | 15.0% |
| !!! | GTAAAAATATCTTTAAGAAA+AGG | - | chr8.2:3441072-3441091 | MS.gene061203:intron | 15.0% |
| !!! | TATTTATTTGTTACAACTTT+TGG | + | chr8.2:3439496-3439515 | None:intergenic | 15.0% |
| !!! | TGTTTTTGAAAAAGTTATTA+GGG | - | chr8.2:3442734-3442753 | MS.gene061203:intron | 15.0% |
| !!! | TTTATACAACTTTTTTTTTG+TGG | + | chr8.2:3440091-3440110 | None:intergenic | 15.0% |
| !! | AACAAACAAAATCATTATTC+AGG | + | chr8.2:3439375-3439394 | None:intergenic | 20.0% |
| !! | AACAATGCATAATATATGTA+AGG | - | chr8.2:3440043-3440062 | MS.gene061203:CDS | 20.0% |
| !! | AATACAAATGTGTAATCAAT+TGG | + | chr8.2:3441520-3441539 | None:intergenic | 20.0% |
| !! | AATGTTAAATTAGAGAGAAT+AGG | - | chr8.2:3442270-3442289 | MS.gene061203:intron | 20.0% |
| !! | ATCAACGTTTAACAAAATTT+GGG | - | chr8.2:3441318-3441337 | MS.gene061203:intron | 20.0% |
| !! | ATTAGATCTAATTAATTCAG+CGG | - | chr8.2:3439020-3439039 | MS.gene061203:CDS | 20.0% |
| !! | GTGTTAATGCAAATATAATA+AGG | + | chr8.2:3441007-3441026 | None:intergenic | 20.0% |
| !! | TAAGAAAAGTAAAGTAACAA+TGG | + | chr8.2:3438871-3438890 | None:intergenic | 20.0% |
| !! | TATCAACGTTTAACAAAATT+TGG | - | chr8.2:3441317-3441336 | MS.gene061203:intron | 20.0% |
| !! | TGAAAAAAGTAACAAAGTTA+TGG | - | chr8.2:3442551-3442570 | MS.gene061203:intron | 20.0% |
| !!! | AAATTACTTCAAACTTTTGA+CGG | - | chr8.2:3439431-3439450 | MS.gene061203:CDS | 20.0% |
| !!! | AAATTTTGCCTTTGTATATT+TGG | - | chr8.2:3441566-3441585 | MS.gene061203:intron | 20.0% |
| !!! | AATCTAACTATAAGCTTTTA+AGG | - | chr8.2:3440305-3440324 | MS.gene061203:CDS | 20.0% |
| !!! | TTTATTCTTTGAAAAATGCT+TGG | + | chr8.2:3439885-3439904 | None:intergenic | 20.0% |
| !!! | TTTTTCAAACATGAAATAGA+TGG | + | chr8.2:3441838-3441857 | None:intergenic | 20.0% |
| ! | AAGGAAAAGAAAAATTGGAA+TGG | - | chr8.2:3442801-3442820 | MS.gene061203:CDS | 25.0% |
| ! | AAGTAACAAAGTTATGGATA+TGG | - | chr8.2:3442557-3442576 | MS.gene061203:intron | 25.0% |
| ! | AGTAACAAAGTTATGGATAT+GGG | - | chr8.2:3442558-3442577 | MS.gene061203:intron | 25.0% |
| ! | ATCATAAAAGGAGAGAAAAA+TGG | + | chr8.2:3441183-3441202 | None:intergenic | 25.0% |
| ! | CACATTAACATATTCTTACA+TGG | + | chr8.2:3440649-3440668 | None:intergenic | 25.0% |
| ! | CATAATATATGTAAGGTTCA+GGG | - | chr8.2:3440050-3440069 | MS.gene061203:CDS | 25.0% |
| ! | CTATGAAAATGTGTCTTTAA+TGG | + | chr8.2:3440178-3440197 | None:intergenic | 25.0% |
| ! | CTATTCTAATCATTATATCC+TGG | + | chr8.2:3440122-3440141 | None:intergenic | 25.0% |
| ! | CTTGGAATATCAAAAAACTA+TGG | + | chr8.2:3439565-3439584 | None:intergenic | 25.0% |
| ! | GAAAAAAGTGAGGTAAAAAA+AGG | - | chr8.2:3440441-3440460 | MS.gene061203:CDS | 25.0% |
| ! | GAAAAATGGAAATCAAATGA+TGG | + | chr8.2:3441169-3441188 | None:intergenic | 25.0% |
| ! | GTAATTTGGATGGTAAATTA+TGG | - | chr8.2:3442334-3442353 | MS.gene061203:intron | 25.0% |
| ! | GTTGTATAAATCAAATTACC+AGG | - | chr8.2:3440101-3440120 | MS.gene061203:CDS | 25.0% |
| ! | GTTTGCGACAAAAAAATAAA+TGG | - | chr8.2:3440152-3440171 | MS.gene061203:CDS | 25.0% |
| ! | TAGATCTAATGATTGAGATT+TGG | + | chr8.2:3439010-3439029 | None:intergenic | 25.0% |
| ! | TCAACGTTTAACAAAATTTG+GGG | - | chr8.2:3441319-3441338 | MS.gene061203:intron | 25.0% |
| ! | TCGCACATTGAAAATATATA+AGG | - | chr8.2:3440879-3440898 | MS.gene061203:intron | 25.0% |
| ! | TCTGTAAAAGTAATCGTAAA+AGG | + | chr8.2:3440519-3440538 | None:intergenic | 25.0% |
| ! | TGATCATACAAACAAAGATA+GGG | - | chr8.2:3442113-3442132 | MS.gene061203:intron | 25.0% |
| ! | TGGATTTGTCAACAAAAAAA+AGG | + | chr8.2:3439347-3439366 | None:intergenic | 25.0% |
| ! | TGTGTCTTTAGTTAGTTAAT+AGG | + | chr8.2:3440210-3440229 | None:intergenic | 25.0% |
| ! | TTTCAGTTGAAATCCAATTA+CGG | - | chr8.2:3439741-3439760 | MS.gene061203:CDS | 25.0% |
| ! | TTTCATGCAGAAATATTGAA+TGG | - | chr8.2:3439933-3439952 | MS.gene061203:CDS | 25.0% |
| ! | TTTGTAAAAAAAACTTCACC+CGG | - | chr8.2:3439839-3439858 | MS.gene061203:CDS | 25.0% |
| !! | ACAATATCACCTAGTATTTT+CGG | + | chr8.2:3440547-3440566 | None:intergenic | 25.0% |
| !! | CAAAATTGCTAGTATCATTT+TGG | + | chr8.2:3442419-3442438 | None:intergenic | 25.0% |
| !! | TTCCAATTTTTCTTTTCCTT+TGG | + | chr8.2:3442801-3442820 | None:intergenic | 25.0% |
| !! | TTTCTAGAGAAAAATACTCT+CGG | - | chr8.2:3440913-3440932 | MS.gene061203:intron | 25.0% |
| !!! | AAATTGAAGAAGTTGTTTCT+AGG | - | chr8.2:3442699-3442718 | MS.gene061203:intron | 25.0% |
| !!! | AATTGAAGAAGTTGTTTCTA+GGG | - | chr8.2:3442700-3442719 | MS.gene061203:intron | 25.0% |
| !!! | AGGTGTACAATACTATTTTT+AGG | - | chr8.2:3440461-3440480 | MS.gene061203:CDS | 25.0% |
| !!! | ATACAACTTTTTTTTTGTGG+TGG | + | chr8.2:3440088-3440107 | None:intergenic | 25.0% |
| !!! | CTTACATCACTTTTCATAAA+GGG | + | chr8.2:3440726-3440745 | None:intergenic | 25.0% |
| !!! | GCTTTAATTTGTTGTAGATT+AGG | + | chr8.2:3441886-3441905 | None:intergenic | 25.0% |
| !!! | GGTGTACAATACTATTTTTA+GGG | - | chr8.2:3440462-3440481 | MS.gene061203:CDS | 25.0% |
| !!! | TATTTGTTACAACTTTTGGA+AGG | + | chr8.2:3439492-3439511 | None:intergenic | 25.0% |
| !!! | TATTTTTCTCTAGAAACGTA+TGG | + | chr8.2:3440909-3440928 | None:intergenic | 25.0% |
| !!! | TGATCTTTGAAATGGAATTA+AGG | + | chr8.2:3441861-3441880 | None:intergenic | 25.0% |
| !!! | TTTAGGGTAAAGTATTTTGT+AGG | - | chr8.2:3440478-3440497 | MS.gene061203:CDS | 25.0% |
| !!! | TTTTTTGTTGACAAATCCAT+TGG | - | chr8.2:3439348-3439367 | MS.gene061203:CDS | 25.0% |
| AAAAACCAATTGACTGATGA+AGG | + | chr8.2:3441964-3441983 | None:intergenic | 30.0% | |
| AAATCATTATTCAGGTCCAA+TGG | + | chr8.2:3439367-3439386 | None:intergenic | 30.0% | |
| AACCTGATCATTTAAGAACT+TGG | + | chr8.2:3440758-3440777 | None:intergenic | 30.0% | |
| AAGTTCTTAAATGATCAGGT+TGG | - | chr8.2:3440757-3440776 | MS.gene061203:intron | 30.0% | |
| ACAAATGTGTAATCAATTGG+TGG | + | chr8.2:3441517-3441536 | None:intergenic | 30.0% | |
| AGTATATCTCAAATCACACA+TGG | + | chr8.2:3439603-3439622 | None:intergenic | 30.0% | |
| ATAACATCATATCTTCGTTC+AGG | + | chr8.2:3440386-3440405 | None:intergenic | 30.0% | |
| CAAAATTTGAGTAGCTGAAT+AGG | + | chr8.2:3441554-3441573 | None:intergenic | 30.0% | |
| CCTTTATGAAAAGTGATGTA+AGG | - | chr8.2:3440724-3440743 | MS.gene061203:intron | 30.0% | |
| CTAACTTATAGTCAACATGT+GGG | + | chr8.2:3442665-3442684 | None:intergenic | 30.0% | |
| CTGATCATACAAACAAAGAT+AGG | - | chr8.2:3442112-3442131 | MS.gene061203:intron | 30.0% | |
| GACATTAAGGGTAAGTAATT+TGG | - | chr8.2:3442320-3442339 | MS.gene061203:intron | 30.0% | |
| GCATAATAAACATGAACATG+TGG | + | chr8.2:3441047-3441066 | None:intergenic | 30.0% | |
| GCATAATATATGTAAGGTTC+AGG | - | chr8.2:3440049-3440068 | MS.gene061203:CDS | 30.0% | |
| GCGCAAAACATTATTAGTTA+AGG | - | chr8.2:3439106-3439125 | MS.gene061203:CDS | 30.0% | |
| GTAACAAAGTTATGGATATG+GGG | - | chr8.2:3442559-3442578 | MS.gene061203:intron | 30.0% | |
| GTCCAAAGGAAAAGAAAAAT+TGG | - | chr8.2:3442796-3442815 | MS.gene061203:CDS | 30.0% | |
| TAAAGGGAGATGTAAATTTC+TGG | + | chr8.2:3440710-3440729 | None:intergenic | 30.0% | |
| TAACCAAAAAGAACAAACAC+AGG | + | chr8.2:3438951-3438970 | None:intergenic | 30.0% | |
| TATTTCTCACATCATAAGAC+AGG | - | chr8.2:3442363-3442382 | MS.gene061203:intron | 30.0% | |
| TCAAACATGAAATAGATGGA+GGG | + | chr8.2:3441834-3441853 | None:intergenic | 30.0% | |
| TCAACAAAAAAAAGGTCCAA+TGG | + | chr8.2:3439339-3439358 | None:intergenic | 30.0% | |
| TCTAACTTATAGTCAACATG+TGG | + | chr8.2:3442666-3442685 | None:intergenic | 30.0% | |
| TGGACTAAACAATTGAAACT+TGG | + | chr8.2:3439583-3439602 | None:intergenic | 30.0% | |
| TTAAGGGTAAGTAATTTGGA+TGG | - | chr8.2:3442324-3442343 | MS.gene061203:intron | 30.0% | |
| TTCAAACATGAAATAGATGG+AGG | + | chr8.2:3441835-3441854 | None:intergenic | 30.0% | |
| TTTGAAAAATGCTTGGCAAA+CGG | + | chr8.2:3439878-3439897 | None:intergenic | 30.0% | |
| ! | AACACACATGATTTTGTCAA+GGG | + | chr8.2:3441659-3441678 | None:intergenic | 30.0% |
| ! | AGTATTTTTCATCAGGATGT+AGG | + | chr8.2:3441939-3441958 | None:intergenic | 30.0% |
| ! | ATAATGTTTTGCGCTTTCAT+TGG | + | chr8.2:3439100-3439119 | None:intergenic | 30.0% |
| ! | ATTAGGCATGATCTTTGAAA+TGG | + | chr8.2:3441869-3441888 | None:intergenic | 30.0% |
| ! | ATTCCTGTGTTTGTTCTTTT+TGG | - | chr8.2:3438945-3438964 | MS.gene061203:CDS | 30.0% |
| ! | CATTTTTGACAAACAACCAT+TGG | - | chr8.2:3439320-3439339 | MS.gene061203:CDS | 30.0% |
| ! | GAAGGTAAGTATTTTTCATC+AGG | + | chr8.2:3441946-3441965 | None:intergenic | 30.0% |
| ! | GTTGAACTTTTATAGGACAT+GGG | - | chr8.2:3442638-3442657 | MS.gene061203:intron | 30.0% |
| ! | TAACACACATGATTTTGTCA+AGG | + | chr8.2:3441660-3441679 | None:intergenic | 30.0% |
| ! | TTAGTACCATTTTGTGCTAT+TGG | + | chr8.2:3442036-3442055 | None:intergenic | 30.0% |
| ! | TTGAACTTTTATAGGACATG+GGG | - | chr8.2:3442639-3442658 | MS.gene061203:intron | 30.0% |
| !! | CCTTACATCACTTTTCATAA+AGG | + | chr8.2:3440727-3440746 | None:intergenic | 30.0% |
| !! | TAGTTTGCTTAATGCTTCAT+TGG | - | chr8.2:3438920-3438939 | MS.gene061203:CDS | 30.0% |
| !!! | ATCAAATGATGGATACCTTT+TGG | + | chr8.2:3441158-3441177 | None:intergenic | 30.0% |
| !!! | ATTTTGGAATTCAAGTTGAG+AGG | + | chr8.2:3442403-3442422 | None:intergenic | 30.0% |
| AAAGAAATGTTGCAAGAGGA+AGG | - | chr8.2:3442765-3442784 | MS.gene061203:CDS | 35.0% | |
| AAATTTCGCATTTCTCTGTG+AGG | + | chr8.2:3441690-3441709 | None:intergenic | 35.0% | |
| AACAAAGATAGGGTCAAACA+AGG | - | chr8.2:3442123-3442142 | MS.gene061203:intron | 35.0% | |
| AAGCTTGAATACGGTATCAA+TGG | + | chr8.2:3441114-3441133 | None:intergenic | 35.0% | |
| ACAAGAACATACCCAAAAAG+AGG | + | chr8.2:3441451-3441470 | None:intergenic | 35.0% | |
| ACCAAAAGAAATGTTGCAAG+AGG | - | chr8.2:3442761-3442780 | MS.gene061203:CDS | 35.0% | |
| ACCATTGAATTGCAACATAC+AGG | - | chr8.2:3441241-3441260 | MS.gene061203:intron | 35.0% | |
| ACCTGTATGTTGCAATTCAA+TGG | + | chr8.2:3441245-3441264 | None:intergenic | 35.0% | |
| ACTGGTAGCCAAATATACAA+AGG | + | chr8.2:3441577-3441596 | None:intergenic | 35.0% | |
| ACTTACCTTCATCAGTCAAT+TGG | - | chr8.2:3441956-3441975 | MS.gene061203:intron | 35.0% | |
| AGAAAATACAGTGCCGTAAT+TGG | + | chr8.2:3439757-3439776 | None:intergenic | 35.0% | |
| AGCTTGAATACGGTATCAAT+GGG | + | chr8.2:3441113-3441132 | None:intergenic | 35.0% | |
| ATACTATATCCCACCTAATG+AGG | - | chr8.2:3439618-3439637 | MS.gene061203:CDS | 35.0% | |
| ATTAGGGGAATTTCCTCATT+AGG | + | chr8.2:3439634-3439653 | None:intergenic | 35.0% | |
| ATTTCTGCATGAAATCCCTA+CGG | + | chr8.2:3439927-3439946 | None:intergenic | 35.0% | |
| CTACTAGGGAAAAAAGGAAT+AGG | - | chr8.2:3442513-3442532 | MS.gene061203:intron | 35.0% | |
| CTATAAAAGTTCAACCATGC+TGG | + | chr8.2:3442633-3442652 | None:intergenic | 35.0% | |
| CTTGTATAGTAATGCTCCAT+TGG | + | chr8.2:3441989-3442008 | None:intergenic | 35.0% | |
| CTTGTTCTACTAGGGAAAAA+AGG | - | chr8.2:3442507-3442526 | MS.gene061203:intron | 35.0% | |
| GAATTGCAACATACAGGTAA+TGG | - | chr8.2:3441247-3441266 | MS.gene061203:intron | 35.0% | |
| GACCTGGAAGGTTAAAAATA+GGG | - | chr8.2:3442241-3442260 | MS.gene061203:intron | 35.0% | |
| GGATATGGGGAAATATGTAT+TGG | - | chr8.2:3442572-3442591 | MS.gene061203:intron | 35.0% | |
| GTACATGTGAAACCAATGTT+TGG | - | chr8.2:3442171-3442190 | MS.gene061203:intron | 35.0% | |
| GTCATAGAAATTGAAGTCTC+CGG | + | chr8.2:3441731-3441750 | None:intergenic | 35.0% | |
| TCAACTGAAAAATTGTCCCA+CGG | + | chr8.2:3439731-3439750 | None:intergenic | 35.0% | |
| TCAGGATGTAGGTATAGAAA+TGG | + | chr8.2:3441928-3441947 | None:intergenic | 35.0% | |
| TGCCAAGTTCTTAAATGATC+AGG | - | chr8.2:3440753-3440772 | MS.gene061203:intron | 35.0% | |
| TGGCATAGAAGAAAAATACC+TGG | + | chr8.2:3438851-3438870 | None:intergenic | 35.0% | |
| TTCTGCTAGAACTACTAGTT+TGG | + | chr8.2:3440827-3440846 | None:intergenic | 35.0% | |
| ! | ACACACATGATTTTGTCAAG+GGG | + | chr8.2:3441658-3441677 | None:intergenic | 35.0% |
| ! | CAGCATGGTTGAACTTTTAT+AGG | - | chr8.2:3442631-3442650 | MS.gene061203:intron | 35.0% |
| ! | CCAACAACAAACCTCTTTTT+GGG | - | chr8.2:3441437-3441456 | MS.gene061203:intron | 35.0% |
| ! | GGAGCATTACTATACAAGAA+AGG | - | chr8.2:3441991-3442010 | MS.gene061203:intron | 35.0% |
| ! | GGTTGAACTTTTATAGGACA+TGG | - | chr8.2:3442637-3442656 | MS.gene061203:intron | 35.0% |
| ! | TAGTTAAGGTGCGTTTGTTA+AGG | - | chr8.2:3439120-3439139 | MS.gene061203:CDS | 35.0% |
| ! | TATCACCTAGTATTTTCGGA+CGG | + | chr8.2:3440543-3440562 | None:intergenic | 35.0% |
| ! | TCCTCTTGCAACATTTCTTT+TGG | + | chr8.2:3442765-3442784 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGTATGATCAGC+TGG | + | chr8.2:3442111-3442130 | None:intergenic | 35.0% |
| ! | TGAACAACAGGTCTTTTTGT+TGG | + | chr8.2:3442447-3442466 | None:intergenic | 35.0% |
| ! | TGGACTTTTTACCCTTTCAA+TGG | - | chr8.2:3442219-3442238 | MS.gene061203:intron | 35.0% |
| ! | TTTTCCACTTGGTTACAACT+AGG | + | chr8.2:3439687-3439706 | None:intergenic | 35.0% |
| !! | CCAAAAAGAGGTTTGTTGTT+GGG | + | chr8.2:3441439-3441458 | None:intergenic | 35.0% |
| !! | CGAAATTTCTTCGTCGATTT+GGG | - | chr8.2:3441702-3441721 | MS.gene061203:intron | 35.0% |
| !!! | AACCCTATTTTTAACCTTCC+AGG | + | chr8.2:3442246-3442265 | None:intergenic | 35.0% |
| !!! | AACTTTTTTTTTGTGGTGGC+CGG | + | chr8.2:3440084-3440103 | None:intergenic | 35.0% |
| !!! | CTTTTTTCCCTAGTAGAACA+AGG | + | chr8.2:3442509-3442528 | None:intergenic | 35.0% |
| !!! | GTCAATTGGTTTTTCTCCAA+TGG | - | chr8.2:3441970-3441989 | MS.gene061203:intron | 35.0% |
| !!! | TCTTTTTGGGTATGTTCTTG+TGG | - | chr8.2:3441450-3441469 | MS.gene061203:intron | 35.0% |
| AAAATTTGGGGAGCCATTGA+TGG | - | chr8.2:3441331-3441350 | MS.gene061203:intron | 40.0% | |
| AAATGGTACTAACCTTCCTC+AGG | - | chr8.2:3442044-3442063 | MS.gene061203:intron | 40.0% | |
| AATGGTACTAACCTTCCTCA+GGG | - | chr8.2:3442045-3442064 | MS.gene061203:intron | 40.0% | |
| ACGTTGATACTGTAGACACT+TGG | + | chr8.2:3441306-3441325 | None:intergenic | 40.0% | |
| AGTATCTTGTGTGCACAACA+GGG | + | chr8.2:3440626-3440645 | None:intergenic | 40.0% | |
| ATCACCTAGTTGTAACCAAG+TGG | - | chr8.2:3439680-3439699 | MS.gene061203:CDS | 40.0% | |
| ATGAGGAAATTCCCCTAATG+AGG | - | chr8.2:3439635-3439654 | MS.gene061203:CDS | 40.0% | |
| CACATCATAAGACAGGTTCA+TGG | - | chr8.2:3442370-3442389 | MS.gene061203:intron | 40.0% | |
| CAGCATGTGGATATGTTGAA+TGG | + | chr8.2:3442485-3442504 | None:intergenic | 40.0% | |
| CATCATATCTTCGTTCAGGT+TGG | + | chr8.2:3440382-3440401 | None:intergenic | 40.0% | |
| CATGTGAAACCAATGTTTGG+AGG | - | chr8.2:3442174-3442193 | MS.gene061203:intron | 40.0% | |
| CATTCAACATATCCACATGC+TGG | - | chr8.2:3442483-3442502 | MS.gene061203:intron | 40.0% | |
| CCACATTGCAAAATCAGTGA+AGG | + | chr8.2:3442202-3442221 | None:intergenic | 40.0% | |
| CCTAACATAGAGAATCCTTG+AGG | + | chr8.2:3441403-3441422 | None:intergenic | 40.0% | |
| CCTAGACCAATAGCACAAAA+TGG | - | chr8.2:3442027-3442046 | MS.gene061203:intron | 40.0% | |
| CCTCAAGGATTCTCTATGTT+AGG | - | chr8.2:3441400-3441419 | MS.gene061203:intron | 40.0% | |
| GACGTTAGACCAATAAGTAG+AGG | - | chr8.2:3441748-3441767 | MS.gene061203:intron | 40.0% | |
| GAGAGAATAGGTGAACATGT+TGG | - | chr8.2:3442282-3442301 | MS.gene061203:intron | 40.0% | |
| GCTTGAATACGGTATCAATG+GGG | + | chr8.2:3441112-3441131 | None:intergenic | 40.0% | |
| GCTTGAGTTCCTCTACTTAT+TGG | + | chr8.2:3441760-3441779 | None:intergenic | 40.0% | |
| GGACCTGGAAGGTTAAAAAT+AGG | - | chr8.2:3442240-3442259 | MS.gene061203:intron | 40.0% | |
| GTAAAGTTAAAGAGCCAGCA+TGG | - | chr8.2:3442616-3442635 | MS.gene061203:intron | 40.0% | |
| GTTGTTCATGCTTCATTGCA+TGG | - | chr8.2:3442459-3442478 | MS.gene061203:intron | 40.0% | |
| TGCAATGAAGCATGAACAAC+AGG | + | chr8.2:3442459-3442478 | None:intergenic | 40.0% | |
| TGCAGTTGGAAGCTTGAATA+CGG | + | chr8.2:3441123-3441142 | None:intergenic | 40.0% | |
| TGTTTGTATGATCAGCTGGT+AGG | + | chr8.2:3442107-3442126 | None:intergenic | 40.0% | |
| TGTTTGTGTTGTGCTTCTCA+TGG | - | chr8.2:3438784-3438803 | MS.gene061203:CDS | 40.0% | |
| TTCCAACTGCAACTACTTCT+TGG | - | chr8.2:3441132-3441151 | MS.gene061203:intron | 40.0% | |
| ! | AATCCTTGAGGTATTCCTGT+TGG | + | chr8.2:3441391-3441410 | None:intergenic | 40.0% |
| ! | ATCACCTAGTATTTTCGGAC+GGG | + | chr8.2:3440542-3440561 | None:intergenic | 40.0% |
| ! | CCCAACAACAAACCTCTTTT+TGG | - | chr8.2:3441436-3441455 | MS.gene061203:intron | 40.0% |
| ! | GCGAAATTTCTTCGTCGATT+TGG | - | chr8.2:3441701-3441720 | MS.gene061203:intron | 40.0% |
| ! | GGCACTTTTGTTGCACAAAA+TGG | - | chr8.2:3441796-3441815 | MS.gene061203:intron | 40.0% |
| ! | GGTTTCTGCAGAGTATTTGA+GGG | - | chr8.2:3442593-3442612 | MS.gene061203:intron | 40.0% |
| ! | GTTTCTGCAGAGTATTTGAG+GGG | - | chr8.2:3442594-3442613 | MS.gene061203:intron | 40.0% |
| ! | TGGTTTCTGCAGAGTATTTG+AGG | - | chr8.2:3442592-3442611 | MS.gene061203:intron | 40.0% |
| ! | TTCTTTTCCTTTGGACCTGT+TGG | + | chr8.2:3442792-3442811 | None:intergenic | 40.0% |
| ! | TTTTACCCTTTCAATGGACC+TGG | - | chr8.2:3442225-3442244 | MS.gene061203:intron | 40.0% |
| !! | AAAAGCACTCAGCCTCATTA+GGG | + | chr8.2:3439650-3439669 | None:intergenic | 40.0% |
| !! | AAAGAGGTTTGTTGTTGGGT+TGG | + | chr8.2:3441435-3441454 | None:intergenic | 40.0% |
| !! | CCATTTTGTGCTATTGGTCT+AGG | + | chr8.2:3442030-3442049 | None:intergenic | 40.0% |
| !! | CCCAAAAAGAGGTTTGTTGT+TGG | + | chr8.2:3441440-3441459 | None:intergenic | 40.0% |
| !! | TAAAAGCACTCAGCCTCATT+AGG | + | chr8.2:3439651-3439670 | None:intergenic | 40.0% |
| !! | TGGCTTTAATGTGCTCTTTG+TGG | + | chr8.2:3441497-3441516 | None:intergenic | 40.0% |
| !!! | ACTTTTTTTTTGTGGTGGCC+GGG | + | chr8.2:3440083-3440102 | None:intergenic | 40.0% |
| !!! | AGTTGGGGTTTTTTTCCACT+TGG | + | chr8.2:3439698-3439717 | None:intergenic | 40.0% |
| !!! | CCTTCACTGATTTTGCAATG+TGG | - | chr8.2:3442199-3442218 | MS.gene061203:intron | 40.0% |
| AAACGGTCACACAACATTGC+CGG | + | chr8.2:3439861-3439880 | None:intergenic | 45.0% | |
| AACCTTCCAGGTCCATTGAA+AGG | + | chr8.2:3442234-3442253 | None:intergenic | 45.0% | |
| ACCTTCCAGGTCCATTGAAA+GGG | + | chr8.2:3442233-3442252 | None:intergenic | 45.0% | |
| ACTGAGGCTCCTTTATCATC+CGG | + | chr8.2:3441361-3441380 | None:intergenic | 45.0% | |
| AGCTGGTAGGTCTATCCAAT+AGG | + | chr8.2:3442094-3442113 | None:intergenic | 45.0% | |
| AGGGGAATTTCCTCATTAGG+TGG | + | chr8.2:3439631-3439650 | None:intergenic | 45.0% | |
| CAATTCTCTCTCTCACCGTA+GGG | - | chr8.2:3439909-3439928 | MS.gene061203:CDS | 45.0% | |
| CTACGGTGAGAGAGAGAATT+GGG | + | chr8.2:3439910-3439929 | None:intergenic | 45.0% | |
| GAACCAACAGGAATACCTCA+AGG | - | chr8.2:3441385-3441404 | MS.gene061203:intron | 45.0% | |
| GAGTATCTTGTGTGCACAAC+AGG | + | chr8.2:3440627-3440646 | None:intergenic | 45.0% | |
| GCAACTACTTCTTGGCCAAA+AGG | - | chr8.2:3441140-3441159 | MS.gene061203:intron | 45.0% | |
| GCACAAATGGGTCAAATTCC+AGG | - | chr8.2:3438830-3438849 | MS.gene061203:CDS | 45.0% | |
| GGGGAATTTCCTCATTAGGT+GGG | + | chr8.2:3439630-3439649 | None:intergenic | 45.0% | |
| GTGAAGGTTCCTCCAAACAT+TGG | + | chr8.2:3442186-3442205 | None:intergenic | 45.0% | |
| TACGGTGAGAGAGAGAATTG+GGG | + | chr8.2:3439909-3439928 | None:intergenic | 45.0% | |
| TGAAAAATTGTCCCACGGCT+TGG | + | chr8.2:3439726-3439745 | None:intergenic | 45.0% | |
| TGAATACGGTATCAATGGGG+CGG | + | chr8.2:3441109-3441128 | None:intergenic | 45.0% | |
| TGTTGTGCTTCTCATGGCAA+TGG | - | chr8.2:3438790-3438809 | MS.gene061203:CDS | 45.0% | |
| ! | AAAGCACTCAGCCTCATTAG+GGG | + | chr8.2:3439649-3439668 | None:intergenic | 45.0% |
| ! | ACTGGGAGCATGTGACATTA+AGG | - | chr8.2:3442307-3442326 | MS.gene061203:intron | 45.0% |
| ! | CACATGATTTTGTCAAGGGG+AGG | + | chr8.2:3441655-3441674 | None:intergenic | 45.0% |
| ! | CTGGGAGCATGTGACATTAA+GGG | - | chr8.2:3442308-3442327 | MS.gene061203:intron | 45.0% |
| ! | TGTTTAGGATTAGGACCCTG+AGG | + | chr8.2:3442063-3442082 | None:intergenic | 45.0% |
| !! | AGGTGAACATGTTGGTGACT+GGG | - | chr8.2:3442290-3442309 | MS.gene061203:intron | 45.0% |
| !! | ATGCTGGCCTTGTTCTACTA+GGG | - | chr8.2:3442499-3442518 | MS.gene061203:intron | 45.0% |
| !! | TAGGTGAACATGTTGGTGAC+TGG | - | chr8.2:3442289-3442308 | MS.gene061203:intron | 45.0% |
| !! | TCTTCGTCGATTTGGGAATC+CGG | - | chr8.2:3441709-3441728 | MS.gene061203:intron | 45.0% |
| !!! | CTCGTGTTTTAGTGACGACA+TGG | + | chr8.2:3441627-3441646 | None:intergenic | 45.0% |
| !!! | CTTTTTTTTTGTGGTGGCCG+GGG | + | chr8.2:3440082-3440101 | None:intergenic | 45.0% |
| !!! | TATTATCATTTTAAATATTA+AGG | - | chr8.2:3440347-3440366 | MS.gene061203:intron | 5.0% |
| AACGGTCACACAACATTGCC+GGG | + | chr8.2:3439860-3439879 | None:intergenic | 50.0% | |
| AAGGTTCAGGGTTCAAACCC+CGG | - | chr8.2:3440062-3440081 | MS.gene061203:CDS | 50.0% | |
| ACCCTTTCAATGGACCTGGA+AGG | - | chr8.2:3442229-3442248 | MS.gene061203:intron | 50.0% | |
| ACGGTGAGAGAGAGAATTGG+GGG | + | chr8.2:3439908-3439927 | None:intergenic | 50.0% | |
| AGTAGAACAAGGCCAGCATG+TGG | + | chr8.2:3442498-3442517 | None:intergenic | 50.0% | |
| AGTAGAGGAACTCAAGCTCG+AGG | - | chr8.2:3441763-3441782 | MS.gene061203:intron | 50.0% | |
| ATCATCCGGTCCACCATCAA+TGG | + | chr8.2:3441347-3441366 | None:intergenic | 50.0% | |
| ATTTGGGGAGCCATTGATGG+TGG | - | chr8.2:3441334-3441353 | MS.gene061203:intron | 50.0% | |
| CAATAGGCGCGGTCATGTTT+AGG | + | chr8.2:3442078-3442097 | None:intergenic | 50.0% | |
| CAGACCCGTCCGAAAATACT+AGG | - | chr8.2:3440535-3440554 | MS.gene061203:intron | 50.0% | |
| CCAAATGGCTACCGTGCTTT+AGG | - | chr8.2:3441601-3441620 | MS.gene061203:intron | 50.0% | |
| CCAACTTAGATCCAAGCCGT+GGG | - | chr8.2:3439712-3439731 | MS.gene061203:CDS | 50.0% | |
| CCAATTCTCTCTCTCACCGT+AGG | - | chr8.2:3439908-3439927 | MS.gene061203:CDS | 50.0% | |
| CCTAAAGCACGGTAGCCATT+TGG | + | chr8.2:3441604-3441623 | None:intergenic | 50.0% | |
| CCTACGGTGAGAGAGAGAAT+TGG | + | chr8.2:3439911-3439930 | None:intergenic | 50.0% | |
| CCTAGAGCAGCTGCACAAAT+GGG | - | chr8.2:3438818-3438837 | MS.gene061203:CDS | 50.0% | |
| CTAAACATGACCGCGCCTAT+TGG | - | chr8.2:3442076-3442095 | MS.gene061203:intron | 50.0% | |
| GAATACGGTATCAATGGGGC+GGG | + | chr8.2:3441108-3441127 | None:intergenic | 50.0% | |
| GGCCAAGAAGTAGTTGCAGT+TGG | + | chr8.2:3441137-3441156 | None:intergenic | 50.0% | |
| GTAGGTCTATCCAATAGGCG+CGG | + | chr8.2:3442089-3442108 | None:intergenic | 50.0% | |
| TAGGATTAGGACCCTGAGGA+AGG | + | chr8.2:3442059-3442078 | None:intergenic | 50.0% | |
| TCCTAGAGCAGCTGCACAAA+TGG | - | chr8.2:3438817-3438836 | MS.gene061203:CDS | 50.0% | |
| TGACGACATGGCCTAAAGCA+CGG | + | chr8.2:3441615-3441634 | None:intergenic | 50.0% | |
| TGGCTACCAGTAGCTCCAAA+TGG | - | chr8.2:3441586-3441605 | MS.gene061203:intron | 50.0% | |
| TTGCAAGAGGAAGGACCAAC+AGG | - | chr8.2:3442774-3442793 | MS.gene061203:CDS | 50.0% | |
| ! | ACAGGTAATGGTTTCGCGAG+AGG | - | chr8.2:3441259-3441278 | MS.gene061203:intron | 50.0% |
| ! | CAAGCTCGAGGCATTCATGT+AGG | - | chr8.2:3441775-3441794 | MS.gene061203:intron | 50.0% |
| ! | CACGGCTTGGATCTAAGTTG+GGG | + | chr8.2:3439713-3439732 | None:intergenic | 50.0% |
| ! | CCACGGCTTGGATCTAAGTT+GGG | + | chr8.2:3439714-3439733 | None:intergenic | 50.0% |
| ! | GCGCGGTCATGTTTAGGATT+AGG | + | chr8.2:3442072-3442091 | None:intergenic | 50.0% |
| !! | CATGCTGGCCTTGTTCTACT+AGG | - | chr8.2:3442498-3442517 | MS.gene061203:intron | 50.0% |
| !! | GATGGTGGACCGGATGATAA+AGG | - | chr8.2:3441349-3441368 | MS.gene061203:intron | 50.0% |
| !! | TCCTGTTGGTTCGAACACTG+AGG | + | chr8.2:3441377-3441396 | None:intergenic | 50.0% |
| AGAGGAGTCCTCGATCTAGG+TGG | - | chr8.2:3441277-3441296 | MS.gene061203:intron | 55.0% | |
| CCCAACTTAGATCCAAGCCG+TGG | - | chr8.2:3439711-3439730 | MS.gene061203:CDS | 55.0% | |
| CCCATTTGTGCAGCTGCTCT+AGG | + | chr8.2:3438821-3438840 | None:intergenic | 55.0% | |
| GAGGAGTCCTCGATCTAGGT+GGG | - | chr8.2:3441278-3441297 | MS.gene061203:intron | 55.0% | |
| GCCTCAGTGTTCGAACCAAC+AGG | - | chr8.2:3441373-3441392 | MS.gene061203:intron | 55.0% | |
| GGAAGGACCAACAGGTCCAA+AGG | - | chr8.2:3442782-3442801 | MS.gene061203:CDS | 55.0% | |
| ! | CCCACGGCTTGGATCTAAGT+TGG | + | chr8.2:3439715-3439734 | None:intergenic | 55.0% |
| ! | CGGTAGCCATTTGGAGCTAC+TGG | + | chr8.2:3441595-3441614 | None:intergenic | 55.0% |
| CTTGGAGCCCACCTAGATCG+AGG | + | chr8.2:3441288-3441307 | None:intergenic | 60.0% | |
| GCGAGAGGAGTCCTCGATCT+AGG | - | chr8.2:3441274-3441293 | MS.gene061203:intron | 60.0% | |
| !! | GGGAGCCATTGATGGTGGAC+CGG | - | chr8.2:3441339-3441358 | MS.gene061203:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 3438758 | 3442836 | 3438758 | ID=MS.gene061203 |
| chr8.2 | mRNA | 3438758 | 3442836 | 3438758 | ID=MS.gene061203.t1;Parent=MS.gene061203 |
| chr8.2 | exon | 3442743 | 3442836 | 3442743 | ID=MS.gene061203.t1.exon1;Parent=MS.gene061203.t1 |
| chr8.2 | CDS | 3442743 | 3442836 | 3442743 | ID=cds.MS.gene061203.t1;Parent=MS.gene061203.t1 |
| chr8.2 | exon | 3440433 | 3440525 | 3440433 | ID=MS.gene061203.t1.exon2;Parent=MS.gene061203.t1 |
| chr8.2 | CDS | 3440433 | 3440525 | 3440433 | ID=cds.MS.gene061203.t1;Parent=MS.gene061203.t1 |
| chr8.2 | exon | 3438758 | 3440331 | 3438758 | ID=MS.gene061203.t1.exon3;Parent=MS.gene061203.t1 |
| chr8.2 | CDS | 3438758 | 3440331 | 3438758 | ID=cds.MS.gene061203.t1;Parent=MS.gene061203.t1 |
| Gene Sequence |
| Protein sequence |
