Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070279.t1 | RHN64698.1 | 93.8 | 325 | 20 | 0 | 1 | 325 | 14 | 338 | 3.60E-181 | 644 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070279.t1 | Q9LVD4 | 50.9 | 324 | 155 | 4 | 1 | 322 | 54 | 375 | 3.5e-92 | 339.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070279.t1 | G7JUB4 | 93.8 | 325 | 20 | 0 | 1 | 325 | 58 | 382 | 2.6e-181 | 644.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene070279 | 0.820887 | 5.41E-53 | -1.69E-46 |
| MS.gene049794 | MS.gene070279 | 0.801543 | 8.57E-49 | -1.69E-46 |
| MS.gene050122 | MS.gene070279 | 0.823385 | 1.43E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene070279 | 0.839608 | 1.43E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene070279 | 0.80137 | 9.30E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene070279 | 0.800066 | 1.72E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene070279 | 0.86847 | 6.38E-66 | -1.69E-46 |
| MS.gene050783 | MS.gene070279 | 0.806362 | 8.54E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene070279 | 0.827084 | 1.90E-54 | -1.69E-46 |
| MS.gene051255 | MS.gene070279 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene070279 | 0.833283 | 5.83E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene070279 | 0.845531 | 3.83E-59 | -1.69E-46 |
| MS.gene051525 | MS.gene070279 | 0.882124 | 1.35E-70 | -1.69E-46 |
| MS.gene051568 | MS.gene070279 | 0.808119 | 3.62E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene070279 | 0.85118 | 1.05E-60 | -1.69E-46 |
| MS.gene051588 | MS.gene070279 | 0.822379 | 2.44E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene070279 | 0.828889 | 6.99E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene070279 | -0.855765 | 5.07E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene070279 | 0.809788 | 1.59E-50 | -1.69E-46 |
| MS.gene052207 | MS.gene070279 | 0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene070279 | 0.830426 | 2.96E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene070279 | 0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene070279 | 0.837682 | 4.50E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene070279 | 0.837698 | 4.46E-57 | -1.69E-46 |
| MS.gene053169 | MS.gene070279 | 0.842208 | 2.97E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene070279 | 0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene05335 | MS.gene070279 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene070279 | 0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene070279 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene070279 | 0.821203 | 4.57E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene070279 | 0.808945 | 2.41E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene070279 | 0.811966 | 5.38E-51 | -1.69E-46 |
| MS.gene054013 | MS.gene070279 | 0.80968 | 1.68E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene070279 | 0.847505 | 1.11E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene070279 | 0.853187 | 2.82E-61 | -1.69E-46 |
| MS.gene054719 | MS.gene070279 | 0.857946 | 1.15E-62 | -1.69E-46 |
| MS.gene054920 | MS.gene070279 | 0.87171 | 5.55E-67 | -1.69E-46 |
| MS.gene055116 | MS.gene070279 | 0.834668 | 2.62E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene070279 | 0.867509 | 1.30E-65 | -1.69E-46 |
| MS.gene055390 | MS.gene070279 | 0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene070279 | 0.831978 | 1.23E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene070279 | 0.851062 | 1.13E-60 | -1.69E-46 |
| MS.gene055604 | MS.gene070279 | 0.839879 | 1.22E-57 | -1.69E-46 |
| MS.gene055666 | MS.gene070279 | 0.809619 | 1.73E-50 | -1.69E-46 |
| MS.gene05594 | MS.gene070279 | 0.84911 | 3.99E-60 | -1.69E-46 |
| MS.gene05602 | MS.gene070279 | 0.821696 | 3.52E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene070279 | 0.810925 | 9.04E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene070279 | 0.873511 | 1.39E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene070279 | 0.819216 | 1.30E-52 | -1.69E-46 |
| MS.gene056513 | MS.gene070279 | 0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene056514 | MS.gene070279 | 0.822719 | 2.04E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene070279 | 0.845308 | 4.40E-59 | -1.69E-46 |
| MS.gene056902 | MS.gene070279 | 0.855589 | 5.70E-62 | -1.69E-46 |
| MS.gene057121 | MS.gene070279 | 0.808346 | 3.24E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene070279 | 0.801693 | 7.98E-49 | -1.69E-46 |
| MS.gene057330 | MS.gene070279 | 0.800104 | 1.69E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene070279 | 0.849636 | 2.85E-60 | -1.69E-46 |
| MS.gene057476 | MS.gene070279 | 0.849283 | 3.57E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene070279 | 0.826955 | 2.04E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene070279 | 0.830115 | 3.52E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene070279 | 0.827793 | 1.29E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene070279 | 0.806121 | 9.59E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene070279 | 0.838702 | 2.46E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene070279 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene070279 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene070279 | 0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene070279 | 0.884007 | 2.77E-71 | -1.69E-46 |
| MS.gene05886 | MS.gene070279 | 0.81625 | 6.09E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene070279 | 0.825327 | 4.98E-54 | -1.69E-46 |
| MS.gene058949 | MS.gene070279 | 0.815548 | 8.74E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene070279 | 0.85347 | 2.34E-61 | -1.69E-46 |
| MS.gene059082 | MS.gene070279 | 0.813632 | 2.32E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene070279 | 0.871521 | 6.42E-67 | -1.69E-46 |
| MS.gene059462 | MS.gene070279 | 0.820058 | 8.38E-53 | -1.69E-46 |
| MS.gene059499 | MS.gene070279 | 0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene070279 | 0.804383 | 2.22E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene070279 | 0.833052 | 6.65E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene070279 | 0.813708 | 2.23E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene070279 | 0.821083 | 4.87E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene070279 | 0.806227 | 9.11E-50 | -1.69E-46 |
| MS.gene059933 | MS.gene070279 | 0.821206 | 4.57E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene070279 | 0.827913 | 1.20E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene070279 | 0.826775 | 2.25E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene070279 | 0.87111 | 8.77E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070279 | MS.gene49595 | PPI |
| MS.gene070279 | MS.gene066288 | PPI |
| MS.gene032779 | MS.gene070279 | PPI |
| MS.gene070279 | MS.gene99026 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070279.t1 | MTR_4g127510 | 93.846 | 325 | 20 | 0 | 1 | 325 | 58 | 382 | 0.0 | 635 |
| MS.gene070279.t1 | MTR_2g037770 | 69.846 | 325 | 96 | 2 | 1 | 325 | 60 | 382 | 9.62e-165 | 464 |
| MS.gene070279.t1 | MTR_2g037790 | 64.724 | 326 | 112 | 3 | 1 | 325 | 64 | 387 | 5.77e-152 | 432 |
| MS.gene070279.t1 | MTR_2g037790 | 64.724 | 326 | 112 | 3 | 1 | 325 | 61 | 384 | 7.07e-152 | 431 |
| MS.gene070279.t1 | MTR_4g127490 | 64.526 | 327 | 109 | 5 | 1 | 322 | 69 | 393 | 1.18e-146 | 419 |
| MS.gene070279.t1 | MTR_4g127490 | 64.526 | 327 | 109 | 5 | 1 | 322 | 67 | 391 | 2.06e-146 | 418 |
| MS.gene070279.t1 | MTR_2g037770 | 70.248 | 242 | 70 | 2 | 1 | 242 | 61 | 300 | 1.50e-119 | 347 |
| MS.gene070279.t1 | MTR_2g037770 | 70.248 | 242 | 70 | 2 | 1 | 242 | 60 | 299 | 1.79e-119 | 347 |
| MS.gene070279.t1 | MTR_2g037770 | 69.524 | 210 | 63 | 1 | 1 | 210 | 60 | 268 | 4.27e-103 | 303 |
| MS.gene070279.t1 | MTR_7g061830 | 25.076 | 327 | 200 | 12 | 2 | 301 | 99 | 407 | 2.94e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070279.t1 | AT5G57240 | 50.926 | 324 | 155 | 4 | 1 | 322 | 54 | 375 | 5.89e-113 | 332 |
| MS.gene070279.t1 | AT5G57240 | 50.926 | 324 | 155 | 4 | 1 | 322 | 54 | 375 | 5.89e-113 | 332 |
| MS.gene070279.t1 | AT5G57240 | 50.926 | 324 | 155 | 4 | 1 | 322 | 54 | 375 | 5.89e-113 | 332 |
| MS.gene070279.t1 | AT4G25850 | 52.469 | 324 | 150 | 4 | 1 | 322 | 59 | 380 | 2.14e-111 | 328 |
| MS.gene070279.t1 | AT4G25850 | 52.308 | 325 | 151 | 4 | 1 | 323 | 161 | 483 | 9.08e-110 | 328 |
| MS.gene070279.t1 | AT5G57240 | 47.278 | 349 | 155 | 5 | 1 | 322 | 54 | 400 | 4.56e-107 | 318 |
| MS.gene070279.t1 | AT5G57240 | 47.278 | 349 | 155 | 5 | 1 | 322 | 54 | 400 | 4.56e-107 | 318 |
| MS.gene070279.t1 | AT4G25860 | 50.617 | 324 | 156 | 4 | 1 | 322 | 60 | 381 | 7.02e-107 | 317 |
| MS.gene070279.t1 | AT4G25860 | 50.462 | 325 | 157 | 4 | 1 | 323 | 54 | 376 | 1.30e-106 | 316 |
| MS.gene070279.t1 | AT4G25850 | 54.808 | 208 | 92 | 2 | 1 | 206 | 59 | 266 | 1.06e-71 | 223 |
| MS.gene070279.t1 | AT3G09300 | 26.300 | 327 | 196 | 12 | 2 | 301 | 99 | 407 | 2.97e-17 | 82.4 |
| MS.gene070279.t1 | AT5G02100 | 25.382 | 327 | 199 | 12 | 2 | 301 | 67 | 375 | 7.52e-16 | 78.2 |
| MS.gene070279.t1 | AT5G02100 | 25.382 | 327 | 199 | 12 | 2 | 301 | 94 | 402 | 9.24e-16 | 78.2 |
| MS.gene070279.t1 | AT5G59420 | 25.672 | 335 | 190 | 13 | 2 | 302 | 94 | 403 | 4.16e-14 | 73.2 |
| MS.gene070279.t1 | AT5G02100 | 27.386 | 241 | 148 | 10 | 2 | 231 | 94 | 318 | 1.07e-13 | 71.2 |
Find 92 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACAATCTTTCTTTGGATT+TGG | 0.214403 | 8.2:+5647217 | MS.gene070279:CDS |
| GATGCAAAAGAAGTTCTTTC+AGG | 0.216977 | 8.2:+5647524 | MS.gene070279:CDS |
| AGAAATCTGAATAAGAAATT+TGG | 0.242852 | 8.2:-5647112 | None:intergenic |
| TTCCAATTCCTGGTATTGAT+TGG | 0.273123 | 8.2:+5647134 | MS.gene070279:CDS |
| GAAAATCGAAGACGAATAAA+AGG | 0.274908 | 8.2:+5647244 | MS.gene070279:CDS |
| GACAATCTTTCTTTGGATTT+GGG | 0.281255 | 8.2:+5647218 | MS.gene070279:CDS |
| TACATTAGACAATCTTTCTT+TGG | 0.291802 | 8.2:+5647211 | MS.gene070279:CDS |
| CAACAGAATCAGCTCTTGTT+TGG | 0.292875 | 8.2:+5647721 | MS.gene070279:CDS |
| TTCAGATTTCTTCCAATTCC+TGG | 0.299189 | 8.2:+5647124 | MS.gene070279:CDS |
| AATGTTCTTTATAAAGTTGA+TGG | 0.305358 | 8.2:+5647292 | MS.gene070279:CDS |
| AACAGAATCAGCTCTTGTTT+GGG | 0.307712 | 8.2:+5647722 | MS.gene070279:CDS |
| CTGCCACTAGGCCTGTTTCT+AGG | 0.311825 | 8.2:-5647180 | None:intergenic |
| ACTACACGACCACAAAGTTT+TGG | 0.313131 | 8.2:+5644778 | MS.gene070279:CDS |
| AGGGTGGCAATAGGGGCATT+TGG | 0.339692 | 8.2:-5647936 | None:intergenic |
| AATAATTATAGGGTGGCAAT+AGG | 0.343917 | 8.2:-5647945 | None:intergenic |
| TCCAATTCCTGGTATTGATT+GGG | 0.344320 | 8.2:+5647135 | MS.gene070279:CDS |
| CAAGACATTAAGGTTTCCTT+TGG | 0.344554 | 8.2:-5644845 | None:intergenic |
| GATCCTTAACAAAAGGAGTA+TGG | 0.365025 | 8.2:-5647550 | None:intergenic |
| CATCCACATAAATAATTATA+GGG | 0.369840 | 8.2:-5647955 | None:intergenic |
| ACCATTGGATAGATTTATAT+CGG | 0.370049 | 8.2:+5644735 | MS.gene070279:CDS |
| AAGCAATCATAAGCAACAAT+TGG | 0.370621 | 8.2:+5647757 | MS.gene070279:CDS |
| AATTGTTGCTTATGATTGCT+TGG | 0.374240 | 8.2:-5647755 | None:intergenic |
| GGGTGGCAATAGGGGCATTT+GGG | 0.383257 | 8.2:-5647935 | None:intergenic |
| TTTATAAAGTTGATGGTCAC+TGG | 0.383419 | 8.2:+5647299 | MS.gene070279:CDS |
| ACCCAATCAATACCAGGAAT+TGG | 0.388589 | 8.2:-5647136 | None:intergenic |
| ATAATTATAGGGTGGCAATA+GGG | 0.390685 | 8.2:-5647944 | None:intergenic |
| TTAGTCACTATGAAGTGTTT+AGG | 0.390721 | 8.2:-5647867 | None:intergenic |
| CCTTAATGTCTTGCTTGAAC+AGG | 0.411836 | 8.2:+5644855 | MS.gene070279:CDS |
| CCTGTTCAAGCAAGACATTA+AGG | 0.416098 | 8.2:-5644855 | None:intergenic |
| CTTCTGATCAGTGGCATGTA+AGG | 0.421033 | 8.2:-5646794 | None:intergenic |
| ACTATCCGGTGCCTAGAAAC+AGG | 0.426852 | 8.2:+5647169 | MS.gene070279:CDS |
| AGCAATCATAAGCAACAATT+GGG | 0.430292 | 8.2:+5647758 | MS.gene070279:CDS |
| CAGCTAATAATGCAGAAGTA+AGG | 0.433495 | 8.2:+5647492 | MS.gene070279:CDS |
| ATGATGAGTTTCAGCAAGAA+TGG | 0.436394 | 8.2:-5644818 | None:intergenic |
| AGCTGCATCCTTCAATGTTA+CGG | 0.442705 | 8.2:-5647474 | None:intergenic |
| TCTCCACTGCCAAAGTTTGT+TGG | 0.444382 | 8.2:+5646844 | MS.gene070279:CDS |
| TACCATTGAAGCTGTGATCT+AGG | 0.452326 | 8.2:-5644652 | None:intergenic |
| ATGCAAAAGAAGTTCTTTCA+GGG | 0.464921 | 8.2:+5647525 | MS.gene070279:CDS |
| AGAGTCAAAAGGAGAAACTT+TGG | 0.468476 | 8.2:+5647842 | MS.gene070279:CDS |
| ACCTCTGGATCCTTAACAAA+AGG | 0.474417 | 8.2:-5647557 | None:intergenic |
| TTCAGCAAGAATGGGATTGT+AGG | 0.474989 | 8.2:-5644809 | None:intergenic |
| AAGTTGATGGTCACTGGGAC+AGG | 0.477793 | 8.2:+5647305 | MS.gene070279:CDS |
| GCAGGTTTCACACCATCCTC+AGG | 0.478451 | 8.2:+5646765 | MS.gene070279:intron |
| TTGCAGCACCGTAACATTGA+AGG | 0.485137 | 8.2:+5647466 | MS.gene070279:intron |
| TGATGAGTTTCAGCAAGAAT+GGG | 0.485345 | 8.2:-5644817 | None:intergenic |
| ATCTTTCTTTGGATTTGGGT+CGG | 0.489778 | 8.2:+5647222 | MS.gene070279:CDS |
| CTAATAGCAAAGAAGATGGC+TGG | 0.497615 | 8.2:+5647886 | MS.gene070279:CDS |
| TATGTTTCCCTTCTGATCAG+TGG | 0.503129 | 8.2:-5646803 | None:intergenic |
| AAACTGCATCTCCACAATCA+TGG | 0.507914 | 8.2:+5647067 | MS.gene070279:CDS |
| GTTTGTTTACCAACAAACTT+TGG | 0.511367 | 8.2:-5646853 | None:intergenic |
| TCAGCAAGAATGGGATTGTA+GGG | 0.515658 | 8.2:-5644808 | None:intergenic |
| CAACAATGGGAAAACACCAT+TGG | 0.516688 | 8.2:+5644720 | MS.gene070279:CDS |
| GATTTATATCGGTAGTTGCA+TGG | 0.516808 | 8.2:+5644746 | MS.gene070279:CDS |
| TGATAAATAGCATCAACAAT+GGG | 0.517605 | 8.2:+5644707 | MS.gene070279:CDS |
| GGAACAACTCCAAAACTTTG+TGG | 0.523014 | 8.2:-5644787 | None:intergenic |
| CTTAGTGAAAGAGAGTCAAA+AGG | 0.526386 | 8.2:+5647831 | MS.gene070279:CDS |
| TGCCTAGATCACAGCTTCAA+TGG | 0.526396 | 8.2:+5644650 | MS.gene070279:CDS |
| TAATTATAGGGTGGCAATAG+GGG | 0.530263 | 8.2:-5647943 | None:intergenic |
| AAAATCGAAGACGAATAAAA+GGG | 0.533830 | 8.2:+5647245 | MS.gene070279:CDS |
| AGATCACAGCTTCAATGGTA+TGG | 0.534057 | 8.2:+5644655 | MS.gene070279:CDS |
| GGGTTGGCAATGTCACTATC+CGG | 0.534777 | 8.2:+5647155 | MS.gene070279:CDS |
| ACTGTTCACCAATTCAAAAG+TGG | 0.544922 | 8.2:+5647910 | MS.gene070279:CDS |
| TTACCAACAAACTTTGGCAG+TGG | 0.549257 | 8.2:-5646847 | None:intergenic |
| CATATGTCTCTCCATGATTG+TGG | 0.550271 | 8.2:-5647078 | None:intergenic |
| ATTCCTGGTATTGATTGGGT+TGG | 0.551107 | 8.2:+5647139 | MS.gene070279:CDS |
| TTATAAAGTTGATGGTCACT+GGG | 0.556534 | 8.2:+5647300 | MS.gene070279:CDS |
| CTTACATGCCACTGATCAGA+AGG | 0.558760 | 8.2:+5646795 | MS.gene070279:CDS |
| GTGACTAATAGCAAAGAAGA+TGG | 0.559067 | 8.2:+5647882 | MS.gene070279:CDS |
| AGCTAATAATGCAGAAGTAA+GGG | 0.564631 | 8.2:+5647493 | MS.gene070279:CDS |
| CTAGGCCTGTTTCTAGGCAC+CGG | 0.578301 | 8.2:-5647174 | None:intergenic |
| TTGATAAATAGCATCAACAA+TGG | 0.581542 | 8.2:+5644706 | MS.gene070279:CDS |
| GGTGAATGTGTATATTCCAC+AGG | 0.587207 | 8.2:+5644676 | MS.gene070279:CDS |
| GAAACTCATCATGTCTCCAA+AGG | 0.590812 | 8.2:+5644829 | MS.gene070279:CDS |
| CAAACTTTGGCAGTGGAGAG+TGG | 0.591312 | 8.2:-5646840 | None:intergenic |
| ACCGATATAAATCTATCCAA+TGG | 0.599610 | 8.2:-5644736 | None:intergenic |
| CAATTGGGGAAAAGCAAGAG+AGG | 0.602952 | 8.2:+5647773 | MS.gene070279:CDS |
| TGTAGCTCAATTCTGCCACT+AGG | 0.606549 | 8.2:-5647192 | None:intergenic |
| ACAGAATCAGCTCTTGTTTG+GGG | 0.607067 | 8.2:+5647723 | MS.gene070279:CDS |
| GGAGTAAAAGTTGACATGCA+TGG | 0.611619 | 8.2:+5647037 | MS.gene070279:CDS |
| CAAACAAGAGCTGATTCTGT+TGG | 0.613139 | 8.2:-5647720 | None:intergenic |
| CTGTTCACCAATTCAAAAGT+GGG | 0.616115 | 8.2:+5647911 | MS.gene070279:CDS |
| ATTTATCAAGTCTACACCTG+TGG | 0.632528 | 8.2:-5644692 | None:intergenic |
| TTGCCAACCCAATCAATACC+AGG | 0.642684 | 8.2:-5647142 | None:intergenic |
| CCACATAAATAATTATAGGG+TGG | 0.649669 | 8.2:-5647952 | None:intergenic |
| GTGCCTAGAAACAGGCCTAG+TGG | 0.659357 | 8.2:+5647177 | MS.gene070279:CDS |
| GTAAGGCAGATACCTGAGGA+TGG | 0.662691 | 8.2:-5646777 | None:intergenic |
| GCAATCATAAGCAACAATTG+GGG | 0.664322 | 8.2:+5647759 | MS.gene070279:CDS |
| AGAGGCAAAGAACACTGTGG+AGG | 0.678761 | 8.2:+5647791 | MS.gene070279:CDS |
| TTACATGCCACTGATCAGAA+GGG | 0.681910 | 8.2:+5646796 | MS.gene070279:CDS |
| GCATGTAAGGCAGATACCTG+AGG | 0.700701 | 8.2:-5646781 | None:intergenic |
| ACACTGTGGAGGAAACTCAG+AGG | 0.752482 | 8.2:+5647802 | MS.gene070279:CDS |
| AAGAGAGGCAAAGAACACTG+TGG | 0.782455 | 8.2:+5647788 | MS.gene070279:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACACTTAATTATTTAT+TGG | + | chr8.2:5645246-5645265 | MS.gene070279:intron | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr8.2:5645919-5645938 | None:intergenic | 10.0% |
| !! | AAATAATAGAGAGAAAAAAA+AGG | - | chr8.2:5646309-5646328 | None:intergenic | 15.0% |
| !! | AATTAAGCAAAATAAGTAAA+AGG | - | chr8.2:5647353-5647372 | None:intergenic | 15.0% |
| !! | ATAAATATTCCTAGATAATT+TGG | + | chr8.2:5645457-5645476 | MS.gene070279:intron | 15.0% |
| !! | CTATTATTTAGATAATTAGA+TGG | + | chr8.2:5647406-5647425 | MS.gene070279:intron | 15.0% |
| !! | GTCAAAAAATTGTTAAAAAA+TGG | - | chr8.2:5646242-5646261 | None:intergenic | 15.0% |
| !! | TGTAAACAATTTAAAAGTAA+TGG | - | chr8.2:5645168-5645187 | None:intergenic | 15.0% |
| !! | TTTCATAAACTCTTTAATAT+AGG | + | chr8.2:5646556-5646575 | MS.gene070279:intron | 15.0% |
| !!! | AGTATTAGTGTTTTTTATTT+TGG | - | chr8.2:5644929-5644948 | None:intergenic | 15.0% |
| !!! | ATTTTATATGATTAGGAATT+AGG | - | chr8.2:5647442-5647461 | None:intergenic | 15.0% |
| !!! | CAACATTATTTTATATGATT+AGG | - | chr8.2:5647449-5647468 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr8.2:5645815-5645834 | None:intergenic | 15.0% |
| !!! | TTGTTATTGCTTTTATAAAT+TGG | - | chr8.2:5646104-5646123 | None:intergenic | 15.0% |
| !!! | TTTCCATTCATTTTTTTAAA+GGG | - | chr8.2:5646164-5646183 | None:intergenic | 15.0% |
| !!! | TTTTCCATTCATTTTTTTAA+AGG | - | chr8.2:5646165-5646184 | None:intergenic | 15.0% |
| !! | AAACAATTTAAAAGTAATGG+AGG | - | chr8.2:5645165-5645184 | None:intergenic | 20.0% |
| !! | AAACTCTTTAATATAGGTTA+TGG | + | chr8.2:5646562-5646581 | MS.gene070279:intron | 20.0% |
| !! | AAATAACAAAGCATGTATTA+AGG | + | chr8.2:5647586-5647605 | MS.gene070279:intron | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr8.2:5645953-5645972 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr8.2:5645952-5645971 | MS.gene070279:intron | 20.0% |
| !! | AATGTTCTTTATAAAGTTGA+TGG | + | chr8.2:5647292-5647311 | MS.gene070279:CDS | 20.0% |
| !! | ACCAAAAAATATAAATGTGT+AGG | + | chr8.2:5647010-5647029 | MS.gene070279:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8.2:5645855-5645874 | None:intergenic | 20.0% |
| !! | AGAAATCTGAATAAGAAATT+TGG | - | chr8.2:5647115-5647134 | None:intergenic | 20.0% |
| !! | GATAATTTGGACAAAAATAA+TGG | + | chr8.2:5645470-5645489 | MS.gene070279:intron | 20.0% |
| !! | GATTGAAATGCAATAAATAA+GGG | - | chr8.2:5645637-5645656 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | - | chr8.2:5645889-5645908 | None:intergenic | 20.0% |
| !! | TCACATTAAAAAAATGGAAA+AGG | - | chr8.2:5647625-5647644 | None:intergenic | 20.0% |
| !! | TGATTGAAATGCAATAAATA+AGG | - | chr8.2:5645638-5645657 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | - | chr8.2:5645890-5645909 | None:intergenic | 20.0% |
| !!! | ACCTACACATTTATATTTTT+TGG | - | chr8.2:5647014-5647033 | None:intergenic | 20.0% |
| !!! | CACTACTCAAAATTATTTTA+TGG | + | chr8.2:5646395-5646414 | MS.gene070279:intron | 20.0% |
| !!! | TATTTTTGTCCAAATTATCT+AGG | - | chr8.2:5645469-5645488 | None:intergenic | 20.0% |
| !!! | TTGTTATTTATTATTACCTC+TGG | - | chr8.2:5647575-5647594 | None:intergenic | 20.0% |
| ! | AAAATCGAAGACGAATAAAA+GGG | + | chr8.2:5647245-5647264 | MS.gene070279:CDS | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr8.2:5645943-5645962 | MS.gene070279:intron | 25.0% |
| ! | AAATATAAATGTGTAGGTAC+TGG | + | chr8.2:5647016-5647035 | MS.gene070279:intron | 25.0% |
| ! | ACCATTGGATAGATTTATAT+CGG | + | chr8.2:5644735-5644754 | MS.gene070279:CDS | 25.0% |
| ! | AGGCTTTCACATTAAAAAAA+TGG | - | chr8.2:5647631-5647650 | None:intergenic | 25.0% |
| ! | ATTTAGCACAATAACTGAAA+AGG | - | chr8.2:5645056-5645075 | None:intergenic | 25.0% |
| ! | CACAACATAACATATGAATA+TGG | - | chr8.2:5646883-5646902 | None:intergenic | 25.0% |
| ! | GTTGTACTGAAATTGAAAAA+GGG | - | chr8.2:5645599-5645618 | None:intergenic | 25.0% |
| ! | TACATTAGACAATCTTTCTT+TGG | + | chr8.2:5647211-5647230 | MS.gene070279:CDS | 25.0% |
| ! | TATATGTATGGTTATATGTG+TGG | - | chr8.2:5644986-5645005 | None:intergenic | 25.0% |
| ! | TGATAAATAGCATCAACAAT+GGG | + | chr8.2:5644707-5644726 | MS.gene070279:CDS | 25.0% |
| ! | TGTTGTACTGAAATTGAAAA+AGG | - | chr8.2:5645600-5645619 | None:intergenic | 25.0% |
| ! | TTGATAAATAGCATCAACAA+TGG | + | chr8.2:5644706-5644725 | MS.gene070279:CDS | 25.0% |
| !! | AAAAACAACTACATTTTTGC+AGG | + | chr8.2:5646747-5646766 | MS.gene070279:intron | 25.0% |
| !! | TTGATTTTCTCTCATTTGAT+TGG | - | chr8.2:5646336-5646355 | None:intergenic | 25.0% |
| !!! | ATTATTCATTAGTCTTGCTA+AGG | + | chr8.2:5645287-5645306 | MS.gene070279:intron | 25.0% |
| !!! | TTATTCATTAGTCTTGCTAA+GGG | + | chr8.2:5645288-5645307 | MS.gene070279:intron | 25.0% |
| AACCGACACTTCAAAATAAA+TGG | + | chr8.2:5646134-5646153 | MS.gene070279:intron | 30.0% | |
| AAGCAATCATAAGCAACAAT+TGG | + | chr8.2:5647757-5647776 | MS.gene070279:CDS | 30.0% | |
| AATTTGACGGAGTCTTAAAT+CGG | - | chr8.2:5645114-5645133 | None:intergenic | 30.0% | |
| ACCGATATAAATCTATCCAA+TGG | - | chr8.2:5644739-5644758 | None:intergenic | 30.0% | |
| AGACAATCTTTCTTTGGATT+TGG | + | chr8.2:5647217-5647236 | MS.gene070279:CDS | 30.0% | |
| AGCAATCATAAGCAACAATT+GGG | + | chr8.2:5647758-5647777 | MS.gene070279:CDS | 30.0% | |
| AGCTAATAATGCAGAAGTAA+GGG | + | chr8.2:5647493-5647512 | MS.gene070279:CDS | 30.0% | |
| ATGCAAAAGAAGTTCTTTCA+GGG | + | chr8.2:5647525-5647544 | MS.gene070279:CDS | 30.0% | |
| GAAAATCGAAGACGAATAAA+AGG | + | chr8.2:5647244-5647263 | MS.gene070279:CDS | 30.0% | |
| GACAATCTTTCTTTGGATTT+GGG | + | chr8.2:5647218-5647237 | MS.gene070279:CDS | 30.0% | |
| GAGTATGTAGTTAACAAACT+TGG | + | chr8.2:5646983-5647002 | MS.gene070279:intron | 30.0% | |
| GTTGTTCTTTCAAACAAACA+TGG | + | chr8.2:5646672-5646691 | MS.gene070279:intron | 30.0% | |
| GTTTGTTTACCAACAAACTT+TGG | - | chr8.2:5646856-5646875 | None:intergenic | 30.0% | |
| ! | AATTGTTGCTTATGATTGCT+TGG | - | chr8.2:5647758-5647777 | None:intergenic | 30.0% |
| ! | GAGTCTTATGTGAAATTTGA+CGG | - | chr8.2:5645127-5645146 | None:intergenic | 30.0% |
| ! | GGACCCTTTAAAAAAATGAA+TGG | + | chr8.2:5646158-5646177 | MS.gene070279:intron | 30.0% |
| ! | TTAGTCACTATGAAGTGTTT+AGG | - | chr8.2:5647870-5647889 | None:intergenic | 30.0% |
| !! | AAGCGACACTCATTTTAAAA+CGG | + | chr8.2:5646035-5646054 | MS.gene070279:intron | 30.0% |
| !! | TTATAAAGTTGATGGTCACT+GGG | + | chr8.2:5647300-5647319 | MS.gene070279:CDS | 30.0% |
| !! | TTTATAAAGTTGATGGTCAC+TGG | + | chr8.2:5647299-5647318 | MS.gene070279:CDS | 30.0% |
| !!! | CACCATTTATTTTGAAGTGT+CGG | - | chr8.2:5646139-5646158 | None:intergenic | 30.0% |
| !!! | GACATTCATTTTGAAACAGA+TGG | - | chr8.2:5645785-5645804 | None:intergenic | 30.0% |
| !!! | GTTCACTTTTGAAACAATTG+AGG | - | chr8.2:5646923-5646942 | None:intergenic | 30.0% |
| !!! | TTGTATTGTTTTAGAGTGTG+TGG | + | chr8.2:5647697-5647716 | MS.gene070279:intron | 30.0% |
| ACTGTTCACCAATTCAAAAG+TGG | + | chr8.2:5647910-5647929 | MS.gene070279:CDS | 35.0% | |
| AGAGTCAAAAGGAGAAACTT+TGG | + | chr8.2:5647842-5647861 | MS.gene070279:CDS | 35.0% | |
| AGTCAATTGCACACAGATTA+AGG | - | chr8.2:5646014-5646033 | None:intergenic | 35.0% | |
| ATCAAGATAAACACGTCATG+TGG | + | chr8.2:5646467-5646486 | MS.gene070279:intron | 35.0% | |
| ATCTTTCTTTGGATTTGGGT+CGG | + | chr8.2:5647222-5647241 | MS.gene070279:CDS | 35.0% | |
| ATGATGAGTTTCAGCAAGAA+TGG | - | chr8.2:5644821-5644840 | None:intergenic | 35.0% | |
| ATTTATCAAGTCTACACCTG+TGG | - | chr8.2:5644695-5644714 | None:intergenic | 35.0% | |
| CAAGACATTAAGGTTTCCTT+TGG | - | chr8.2:5644848-5644867 | None:intergenic | 35.0% | |
| CAGCTAATAATGCAGAAGTA+AGG | + | chr8.2:5647492-5647511 | MS.gene070279:CDS | 35.0% | |
| CGACACTTCAAAATAAATGG+TGG | + | chr8.2:5646137-5646156 | MS.gene070279:intron | 35.0% | |
| CTGTTCACCAATTCAAAAGT+GGG | + | chr8.2:5647911-5647930 | MS.gene070279:CDS | 35.0% | |
| CTTAGTGAAAGAGAGTCAAA+AGG | + | chr8.2:5647831-5647850 | MS.gene070279:CDS | 35.0% | |
| GACACTTAATATGAGATGCA+TGG | - | chr8.2:5645539-5645558 | None:intergenic | 35.0% | |
| GATCCTTAACAAAAGGAGTA+TGG | - | chr8.2:5647553-5647572 | None:intergenic | 35.0% | |
| GATGCAAAAGAAGTTCTTTC+AGG | + | chr8.2:5647524-5647543 | MS.gene070279:CDS | 35.0% | |
| GATTTATATCGGTAGTTGCA+TGG | + | chr8.2:5644746-5644765 | MS.gene070279:CDS | 35.0% | |
| GCAATCATAAGCAACAATTG+GGG | + | chr8.2:5647759-5647778 | MS.gene070279:CDS | 35.0% | |
| GTGACTAATAGCAAAGAAGA+TGG | + | chr8.2:5647882-5647901 | MS.gene070279:CDS | 35.0% | |
| TGATGAGTTTCAGCAAGAAT+GGG | - | chr8.2:5644820-5644839 | None:intergenic | 35.0% | |
| TTCAGATTTCTTCCAATTCC+TGG | + | chr8.2:5647124-5647143 | MS.gene070279:CDS | 35.0% | |
| ! | AACAGAATCAGCTCTTGTTT+GGG | + | chr8.2:5647722-5647741 | MS.gene070279:CDS | 35.0% |
| ! | TTGAACAGGTATTGTTTGGT+GGG | + | chr8.2:5644869-5644888 | MS.gene070279:intron | 35.0% |
| ! | TTGCTTGAACAGGTATTGTT+TGG | + | chr8.2:5644865-5644884 | MS.gene070279:intron | 35.0% |
| !! | CTTTTGACTCTCTTTCACTA+AGG | - | chr8.2:5647833-5647852 | None:intergenic | 35.0% |
| !! | TCCAATTCCTGGTATTGATT+GGG | + | chr8.2:5647135-5647154 | MS.gene070279:CDS | 35.0% |
| !! | TTCCAATTCCTGGTATTGAT+TGG | + | chr8.2:5647134-5647153 | MS.gene070279:CDS | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+AGG | + | chr8.2:5646039-5646058 | MS.gene070279:intron | 35.0% |
| AAACTGCATCTCCACAATCA+TGG | + | chr8.2:5647067-5647086 | MS.gene070279:CDS | 40.0% | |
| AAAGCCTAAATGTGCATGCA+TGG | + | chr8.2:5647644-5647663 | MS.gene070279:intron | 40.0% | |
| AACGGAAGGAGTAAGACATA+AGG | + | chr8.2:5646053-5646072 | MS.gene070279:intron | 40.0% | |
| ACATCCATGCATGCACATTT+AGG | - | chr8.2:5647651-5647670 | None:intergenic | 40.0% | |
| ACCCAATCAATACCAGGAAT+TGG | - | chr8.2:5647139-5647158 | None:intergenic | 40.0% | |
| ACCTCTGGATCCTTAACAAA+AGG | - | chr8.2:5647560-5647579 | None:intergenic | 40.0% | |
| AGATCACAGCTTCAATGGTA+TGG | + | chr8.2:5644655-5644674 | MS.gene070279:CDS | 40.0% | |
| AGCTGCATCCTTCAATGTTA+CGG | - | chr8.2:5647477-5647496 | None:intergenic | 40.0% | |
| ATGGAGGCAGCACTATTTAA+TGG | - | chr8.2:5645149-5645168 | None:intergenic | 40.0% | |
| CAACAATGGGAAAACACCAT+TGG | + | chr8.2:5644720-5644739 | MS.gene070279:CDS | 40.0% | |
| CAACAGAATCAGCTCTTGTT+TGG | + | chr8.2:5647721-5647740 | MS.gene070279:CDS | 40.0% | |
| CATATGTCTCTCCATGATTG+TGG | - | chr8.2:5647081-5647100 | None:intergenic | 40.0% | |
| CCTGTTCAAGCAAGACATTA+AGG | - | chr8.2:5644858-5644877 | None:intergenic | 40.0% | |
| CCTTAATGTCTTGCTTGAAC+AGG | + | chr8.2:5644855-5644874 | MS.gene070279:CDS | 40.0% | |
| CTAATAGCAAAGAAGATGGC+TGG | + | chr8.2:5647886-5647905 | MS.gene070279:CDS | 40.0% | |
| GAAAATGCTAACTAGTGCAG+CGG | + | chr8.2:5645492-5645511 | MS.gene070279:intron | 40.0% | |
| GAAACTCATCATGTCTCCAA+AGG | + | chr8.2:5644829-5644848 | MS.gene070279:CDS | 40.0% | |
| GGAACAACTCCAAAACTTTG+TGG | - | chr8.2:5644790-5644809 | None:intergenic | 40.0% | |
| GGAGTAAAAGTTGACATGCA+TGG | + | chr8.2:5647037-5647056 | MS.gene070279:CDS | 40.0% | |
| GGTGAATGTGTATATTCCAC+AGG | + | chr8.2:5644676-5644695 | MS.gene070279:CDS | 40.0% | |
| TACCATTGAAGCTGTGATCT+AGG | - | chr8.2:5644655-5644674 | None:intergenic | 40.0% | |
| TATGTTTCCCTTCTGATCAG+TGG | - | chr8.2:5646806-5646825 | None:intergenic | 40.0% | |
| TCAGCAAGAATGGGATTGTA+GGG | - | chr8.2:5644811-5644830 | None:intergenic | 40.0% | |
| TGTCTCATTTGAGCTCTACA+CGG | - | chr8.2:5645751-5645770 | None:intergenic | 40.0% | |
| TTACATGCCACTGATCAGAA+GGG | + | chr8.2:5646796-5646815 | MS.gene070279:CDS | 40.0% | |
| TTACCAACAAACTTTGGCAG+TGG | - | chr8.2:5646850-5646869 | None:intergenic | 40.0% | |
| TTCAGCAAGAATGGGATTGT+AGG | - | chr8.2:5644812-5644831 | None:intergenic | 40.0% | |
| ! | ACAGAATCAGCTCTTGTTTG+GGG | + | chr8.2:5647723-5647742 | MS.gene070279:CDS | 40.0% |
| ! | ACTACACGACCACAAAGTTT+TGG | + | chr8.2:5644778-5644797 | MS.gene070279:CDS | 40.0% |
| ! | ATTTGAGACTGTGAGAGAAC+GGG | - | chr8.2:5646703-5646722 | None:intergenic | 40.0% |
| ! | CAAACAAGAGCTGATTCTGT+TGG | - | chr8.2:5647723-5647742 | None:intergenic | 40.0% |
| ! | CTTGAACAGGTATTGTTTGG+TGG | + | chr8.2:5644868-5644887 | MS.gene070279:intron | 40.0% |
| ! | GATTTGAGACTGTGAGAGAA+CGG | - | chr8.2:5646704-5646723 | None:intergenic | 40.0% |
| ! | GCTCCATACTCCTTTTGTTA+AGG | + | chr8.2:5647547-5647566 | MS.gene070279:CDS | 40.0% |
| ! | TCCTTTTGTTAAGGATCCAG+AGG | + | chr8.2:5647556-5647575 | MS.gene070279:CDS | 40.0% |
| ! | TCTAGCTACACGAGCTTTAA+AGG | - | chr8.2:5646426-5646445 | None:intergenic | 40.0% |
| !! | ATTCCTGGTATTGATTGGGT+TGG | + | chr8.2:5647139-5647158 | MS.gene070279:CDS | 40.0% |
| !! | TTTGGGACCCACTTTTGAAT+TGG | - | chr8.2:5647921-5647940 | None:intergenic | 40.0% |
| AAGAGAGGCAAAGAACACTG+TGG | + | chr8.2:5647788-5647807 | MS.gene070279:CDS | 45.0% | |
| CAATTGGGGAAAAGCAAGAG+AGG | + | chr8.2:5647773-5647792 | MS.gene070279:CDS | 45.0% | |
| CTTACATGCCACTGATCAGA+AGG | + | chr8.2:5646795-5646814 | MS.gene070279:CDS | 45.0% | |
| CTTCTGATCAGTGGCATGTA+AGG | - | chr8.2:5646797-5646816 | None:intergenic | 45.0% | |
| TCTCCACTGCCAAAGTTTGT+TGG | + | chr8.2:5646844-5646863 | MS.gene070279:CDS | 45.0% | |
| TGCCTAGATCACAGCTTCAA+TGG | + | chr8.2:5644650-5644669 | MS.gene070279:CDS | 45.0% | |
| TGTAGCTCAATTCTGCCACT+AGG | - | chr8.2:5647195-5647214 | None:intergenic | 45.0% | |
| TTGACGGAGTCTTAAATCGG+TGG | - | chr8.2:5645111-5645130 | None:intergenic | 45.0% | |
| TTGCAGCACCGTAACATTGA+AGG | + | chr8.2:5647466-5647485 | MS.gene070279:intron | 45.0% | |
| TTGCCAACCCAATCAATACC+AGG | - | chr8.2:5647145-5647164 | None:intergenic | 45.0% | |
| ! | ACAGGTATTGTTTGGTGGGA+TGG | + | chr8.2:5644873-5644892 | MS.gene070279:intron | 45.0% |
| !! | AATTAATTAAATTATATGTA+TGG | - | chr8.2:5644998-5645017 | None:intergenic | 5.0% |
| ACACTGTGGAGGAAACTCAG+AGG | + | chr8.2:5647802-5647821 | MS.gene070279:CDS | 50.0% | |
| ACTATCCGGTGCCTAGAAAC+AGG | + | chr8.2:5647169-5647188 | MS.gene070279:CDS | 50.0% | |
| AGAGGCAAAGAACACTGTGG+AGG | + | chr8.2:5647791-5647810 | MS.gene070279:CDS | 50.0% | |
| CAAACTTTGGCAGTGGAGAG+TGG | - | chr8.2:5646843-5646862 | None:intergenic | 50.0% | |
| GCATGTAAGGCAGATACCTG+AGG | - | chr8.2:5646784-5646803 | None:intergenic | 50.0% | |
| GTAAGGCAGATACCTGAGGA+TGG | - | chr8.2:5646780-5646799 | None:intergenic | 50.0% | |
| ! | GGGTTGGCAATGTCACTATC+CGG | + | chr8.2:5647155-5647174 | MS.gene070279:CDS | 50.0% |
| ! | GGTATTGTTTGGTGGGATGG+TGG | + | chr8.2:5644876-5644895 | MS.gene070279:intron | 50.0% |
| !! | AAGTTGATGGTCACTGGGAC+AGG | + | chr8.2:5647305-5647324 | MS.gene070279:CDS | 50.0% |
| !! | TTGTTTGGTGGGATGGTGGA+AGG | + | chr8.2:5644880-5644899 | MS.gene070279:intron | 50.0% |
| CTAGTGCAGCGGCACTAGTT+AGG | + | chr8.2:5645503-5645522 | MS.gene070279:intron | 55.0% | |
| GCAGGTTTCACACCATCCTC+AGG | + | chr8.2:5646765-5646784 | MS.gene070279:intron | 55.0% | |
| GTGCCTAGAAACAGGCCTAG+TGG | + | chr8.2:5647177-5647196 | MS.gene070279:CDS | 55.0% | |
| ! | AGACTGTGAGAGAACGGGCT+TGG | - | chr8.2:5646698-5646717 | None:intergenic | 55.0% |
| ! | CTGCCACTAGGCCTGTTTCT+AGG | - | chr8.2:5647183-5647202 | None:intergenic | 55.0% |
| !! | AGGGTGGCAATAGGGGCATT+TGG | - | chr8.2:5647939-5647958 | None:intergenic | 55.0% |
| !! | CTAGGCCTGTTTCTAGGCAC+CGG | - | chr8.2:5647177-5647196 | None:intergenic | 55.0% |
| !! | GGGTGGCAATAGGGGCATTT+GGG | - | chr8.2:5647938-5647957 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 5644649 | 5647962 | 5644649 | ID=MS.gene070279 |
| chr8.2 | mRNA | 5644649 | 5647962 | 5644649 | ID=MS.gene070279.t1;Parent=MS.gene070279 |
| chr8.2 | exon | 5644649 | 5644876 | 5644649 | ID=MS.gene070279.t1.exon1;Parent=MS.gene070279.t1 |
| chr8.2 | CDS | 5644649 | 5644876 | 5644649 | ID=cds.MS.gene070279.t1;Parent=MS.gene070279.t1 |
| chr8.2 | exon | 5646769 | 5646865 | 5646769 | ID=MS.gene070279.t1.exon2;Parent=MS.gene070279.t1 |
| chr8.2 | CDS | 5646769 | 5646865 | 5646769 | ID=cds.MS.gene070279.t1;Parent=MS.gene070279.t1 |
| chr8.2 | exon | 5647032 | 5647326 | 5647032 | ID=MS.gene070279.t1.exon3;Parent=MS.gene070279.t1 |
| chr8.2 | CDS | 5647032 | 5647326 | 5647032 | ID=cds.MS.gene070279.t1;Parent=MS.gene070279.t1 |
| chr8.2 | exon | 5647472 | 5647577 | 5647472 | ID=MS.gene070279.t1.exon4;Parent=MS.gene070279.t1 |
| chr8.2 | CDS | 5647472 | 5647577 | 5647472 | ID=cds.MS.gene070279.t1;Parent=MS.gene070279.t1 |
| chr8.2 | exon | 5647711 | 5647962 | 5647711 | ID=MS.gene070279.t1.exon5;Parent=MS.gene070279.t1 |
| chr8.2 | CDS | 5647711 | 5647962 | 5647711 | ID=cds.MS.gene070279.t1;Parent=MS.gene070279.t1 |
| Gene Sequence |
| Protein sequence |
