Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035837.t1 | XP_003615160.1 | 99.6 | 260 | 1 | 0 | 1 | 260 | 1 | 260 | 8.80E-138 | 499.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035837.t1 | P42653 | 97.3 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 8.4e-137 | 487.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035837.t1 | B7FIY3 | 99.6 | 260 | 1 | 0 | 1 | 260 | 1 | 260 | 6.4e-138 | 499.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043514 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene83541 | PPI |
| MS.gene54847 | MS.gene035837 | PPI |
| MS.gene55401 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene64150 | PPI |
| MS.gene067412 | MS.gene035837 | PPI |
| MS.gene56475 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene050079 | PPI |
| MS.gene035837 | MS.gene047668 | PPI |
| MS.gene035837 | MS.gene38593 | PPI |
| MS.gene041125 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene53188 | PPI |
| MS.gene035837 | MS.gene043907 | PPI |
| MS.gene035837 | MS.gene010393 | PPI |
| MS.gene48435 | MS.gene035837 | PPI |
| MS.gene55400 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene010179 | PPI |
| MS.gene055488 | MS.gene035837 | PPI |
| MS.gene020411 | MS.gene035837 | PPI |
| MS.gene71392 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene054662 | PPI |
| MS.gene013133 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene010180 | PPI |
| MS.gene035837 | MS.gene028807 | PPI |
| MS.gene006850 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene86409 | PPI |
| MS.gene035837 | MS.gene013047 | PPI |
| MS.gene066779 | MS.gene035837 | PPI |
| MS.gene035837 | MS.gene052176 | PPI |
| MS.gene035837 | MS.gene31370 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035837.t1 | MTR_5g064580 | 99.615 | 260 | 1 | 0 | 1 | 260 | 1 | 260 | 0.0 | 532 |
| MS.gene035837.t1 | MTR_3g099380 | 90.385 | 260 | 25 | 0 | 1 | 260 | 1 | 260 | 1.18e-176 | 486 |
| MS.gene035837.t1 | MTR_3g099380 | 89.655 | 203 | 21 | 0 | 1 | 203 | 1 | 203 | 2.48e-135 | 380 |
| MS.gene035837.t1 | MTR_3g100620 | 75.949 | 237 | 56 | 1 | 8 | 243 | 11 | 247 | 2.51e-135 | 382 |
| MS.gene035837.t1 | MTR_2g091225 | 72.016 | 243 | 66 | 1 | 8 | 250 | 7 | 247 | 9.18e-129 | 365 |
| MS.gene035837.t1 | MTR_8g086270 | 71.605 | 243 | 67 | 1 | 8 | 250 | 7 | 247 | 4.64e-126 | 358 |
| MS.gene035837.t1 | MTR_2g015980 | 69.020 | 255 | 72 | 3 | 6 | 256 | 3 | 254 | 5.52e-126 | 358 |
| MS.gene035837.t1 | MTR_5g044160 | 70.325 | 246 | 71 | 1 | 3 | 248 | 2 | 245 | 2.16e-124 | 354 |
| MS.gene035837.t1 | MTR_4g083060 | 68.898 | 254 | 72 | 2 | 8 | 256 | 7 | 258 | 7.59e-124 | 354 |
| MS.gene035837.t1 | MTR_2g076960 | 66.154 | 260 | 85 | 2 | 1 | 259 | 1 | 258 | 1.07e-123 | 353 |
| MS.gene035837.t1 | MTR_2g091225 | 70.222 | 225 | 65 | 1 | 26 | 250 | 2 | 224 | 5.56e-116 | 332 |
| MS.gene035837.t1 | MTR_0137s0020 | 58.403 | 238 | 93 | 4 | 8 | 243 | 11 | 244 | 1.69e-91 | 270 |
| MS.gene035837.t1 | MTR_3g014060 | 57.983 | 238 | 94 | 4 | 8 | 243 | 11 | 244 | 1.11e-90 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035837.t1 | AT1G78300 | 90.157 | 254 | 24 | 1 | 8 | 260 | 5 | 258 | 1.70e-169 | 468 |
| MS.gene035837.t1 | AT1G35160 | 85.985 | 264 | 33 | 2 | 1 | 260 | 1 | 264 | 1.79e-167 | 464 |
| MS.gene035837.t1 | AT4G09000 | 88.933 | 253 | 26 | 1 | 1 | 251 | 1 | 253 | 2.43e-166 | 461 |
| MS.gene035837.t1 | AT1G35160 | 77.740 | 292 | 33 | 3 | 1 | 260 | 1 | 292 | 3.38e-161 | 449 |
| MS.gene035837.t1 | AT4G09000 | 89.344 | 244 | 24 | 1 | 1 | 242 | 1 | 244 | 2.60e-160 | 447 |
| MS.gene035837.t1 | AT5G38480 | 81.496 | 254 | 46 | 1 | 6 | 258 | 2 | 255 | 3.17e-154 | 429 |
| MS.gene035837.t1 | AT3G02520 | 80.784 | 255 | 48 | 1 | 6 | 259 | 3 | 257 | 1.29e-152 | 426 |
| MS.gene035837.t1 | AT3G02520 | 80.784 | 255 | 48 | 1 | 6 | 259 | 3 | 257 | 1.29e-152 | 426 |
| MS.gene035837.t1 | AT5G38480 | 81.496 | 254 | 45 | 2 | 6 | 258 | 2 | 254 | 9.76e-152 | 423 |
| MS.gene035837.t1 | AT5G38480 | 81.496 | 254 | 45 | 2 | 6 | 258 | 2 | 254 | 9.76e-152 | 423 |
| MS.gene035837.t1 | AT5G10450 | 79.508 | 244 | 49 | 1 | 4 | 246 | 3 | 246 | 3.57e-145 | 406 |
| MS.gene035837.t1 | AT5G10450 | 79.668 | 241 | 48 | 1 | 4 | 243 | 3 | 243 | 8.26e-145 | 405 |
| MS.gene035837.t1 | AT5G10450 | 77.510 | 249 | 55 | 1 | 4 | 251 | 3 | 251 | 8.57e-145 | 406 |
| MS.gene035837.t1 | AT5G10450 | 80.000 | 240 | 47 | 1 | 4 | 242 | 3 | 242 | 5.42e-144 | 404 |
| MS.gene035837.t1 | AT5G16050 | 79.310 | 261 | 50 | 2 | 3 | 260 | 2 | 261 | 3.21e-143 | 402 |
| MS.gene035837.t1 | AT5G16050 | 79.310 | 261 | 50 | 2 | 3 | 260 | 2 | 261 | 3.21e-143 | 402 |
| MS.gene035837.t1 | AT5G65430 | 78.138 | 247 | 52 | 2 | 1 | 246 | 1 | 246 | 2.10e-142 | 399 |
| MS.gene035837.t1 | AT5G65430 | 78.279 | 244 | 51 | 2 | 1 | 243 | 1 | 243 | 5.92e-142 | 398 |
| MS.gene035837.t1 | AT5G65430 | 78.601 | 243 | 50 | 2 | 1 | 242 | 1 | 242 | 2.72e-141 | 397 |
| MS.gene035837.t1 | AT1G26480 | 74.180 | 244 | 60 | 3 | 8 | 250 | 10 | 251 | 7.27e-129 | 366 |
| MS.gene035837.t1 | AT2G42590 | 70.539 | 241 | 69 | 1 | 8 | 248 | 7 | 245 | 3.23e-122 | 349 |
| MS.gene035837.t1 | AT2G42590 | 70.539 | 241 | 69 | 1 | 8 | 248 | 7 | 245 | 3.25e-122 | 349 |
| MS.gene035837.t1 | AT2G42590 | 70.833 | 240 | 68 | 1 | 8 | 247 | 7 | 244 | 8.79e-122 | 348 |
| MS.gene035837.t1 | AT1G34760 | 71.008 | 238 | 67 | 1 | 8 | 245 | 5 | 240 | 3.66e-121 | 346 |
| MS.gene035837.t1 | AT1G34760 | 71.008 | 238 | 67 | 1 | 8 | 245 | 5 | 240 | 4.58e-121 | 346 |
| MS.gene035837.t1 | AT1G22300 | 68.254 | 252 | 73 | 2 | 8 | 259 | 5 | 249 | 6.51e-117 | 335 |
| MS.gene035837.t1 | AT1G22300 | 68.254 | 252 | 73 | 2 | 8 | 259 | 5 | 249 | 6.51e-117 | 335 |
| MS.gene035837.t1 | AT1G22300 | 69.874 | 239 | 70 | 1 | 8 | 246 | 5 | 241 | 1.34e-115 | 332 |
| MS.gene035837.t1 | AT1G78220 | 48.927 | 233 | 116 | 2 | 8 | 239 | 5 | 235 | 1.26e-73 | 225 |
| MS.gene035837.t1 | AT1G22290 | 45.933 | 209 | 91 | 6 | 12 | 217 | 9 | 198 | 4.49e-48 | 159 |
| MS.gene035837.t1 | AT1G22290 | 45.631 | 206 | 90 | 6 | 12 | 214 | 9 | 195 | 6.16e-48 | 157 |
| MS.gene035837.t1 | AT2G10450 | 71.429 | 49 | 14 | 0 | 207 | 255 | 16 | 64 | 7.67e-18 | 76.3 |
Find 0 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTAATTAGGTTAAAATAA+TGG | - | 37512:2896-2915 | MS.gene035837:intron | 15.0% |
| !!! | ATTTTGGTTTATATTTTGTT+TGG | - | 37512:4026-4045 | MS.gene035837:CDS | 15.0% |
| !!! | TAATATGATTTGTGTTAATT+AGG | - | 37512:2784-2803 | MS.gene035837:intron | 15.0% |
| !!! | TTTTGGTTTATATTTTGTTT+GGG | - | 37512:4027-4046 | MS.gene035837:CDS | 15.0% |
| !! | AAAATGAAAGTCTTAAATGA+TGG | - | 37512:2983-3002 | MS.gene035837:intron | 20.0% |
| !! | AATTCACATCAACATTAAAA+AGG | + | 37512:3685-3704 | None:intergenic | 20.0% |
| !! | AATTTCATTAACATGTTTGT+GGG | - | 37512:3639-3658 | MS.gene035837:CDS | 20.0% |
| !! | ACTACAAACTTTAATTGAAA+AGG | + | 37512:3478-3497 | None:intergenic | 20.0% |
| !! | TAATGAATATAGAAAAGAAC+AGG | + | 37512:3823-3842 | None:intergenic | 20.0% |
| !! | TAATTTCATTAACATGTTTG+TGG | - | 37512:3638-3657 | MS.gene035837:CDS | 20.0% |
| !!! | CATATTCTGTTTATTGATTT+TGG | - | 37512:4010-4029 | MS.gene035837:CDS | 20.0% |
| !!! | GATTTGATGATTTCTTAATT+AGG | - | 37512:2884-2903 | MS.gene035837:CDS | 20.0% |
| !!! | TGTTCTTTTCTATATTCATT+AGG | - | 37512:3822-3841 | MS.gene035837:CDS | 20.0% |
| !!! | TTTTCAATTAAAGTTTGTAG+TGG | - | 37512:3477-3496 | MS.gene035837:intron | 20.0% |
| ! | ACTACAGACTTTAATTGAAA+AGG | + | 37512:3539-3558 | None:intergenic | 25.0% |
| ! | GAGATCTAACGTTATATTTA+TGG | - | 37512:2585-2604 | MS.gene035837:intron | 25.0% |
| ! | TATTCTAGATACCGAATAAT+GGG | - | 37512:3411-3430 | MS.gene035837:intron | 25.0% |
| ! | TTTAGGTAAGGGAAATTTAA+CGG | - | 37512:2728-2747 | MS.gene035837:intron | 25.0% |
| !! | AATGTTGATGTGAATTTGTT+AGG | - | 37512:3689-3708 | MS.gene035837:CDS | 25.0% |
| !! | TGATTCTGTTCTGTTATTTA+TGG | - | 37512:3777-3796 | MS.gene035837:CDS | 25.0% |
| !! | TTTCAAATGAGTTGAATGTA+GGG | - | 37512:2941-2960 | MS.gene035837:intron | 25.0% |
| !! | TTTTCAATTAAAGTCTGTAG+TGG | - | 37512:3538-3557 | MS.gene035837:intron | 25.0% |
| !!! | TGTAGGGTATTGTTTATTTT+TGG | - | 37512:2957-2976 | MS.gene035837:intron | 25.0% |
| !!! | TTATATTTTGTTTGGGTTTC+AGG | - | 37512:4034-4053 | MS.gene035837:CDS | 25.0% |
| !!! | TTTAATTTGACTCTGTTTGT+AGG | - | 37512:3261-3280 | MS.gene035837:intron | 25.0% |
| !!! | TTTTCAAATGAGTTGAATGT+AGG | - | 37512:2940-2959 | MS.gene035837:intron | 25.0% |
| AAGAATACCGTTACAGATAT+TGG | + | 37512:2384-2403 | None:intergenic | 30.0% | |
| AGATGAAAGGTGATTATCAT+AGG | - | 37512:2468-2487 | MS.gene035837:intron | 30.0% | |
| ATTGCTGAATTGGATACATT+GGG | - | 37512:3859-3878 | MS.gene035837:CDS | 30.0% | |
| CGCAATATTTCAAACAAGAA+TGG | + | 37512:2695-2714 | None:intergenic | 30.0% | |
| GAACTTTCCAATATCTGTAA+CGG | - | 37512:2374-2393 | MS.gene035837:intron | 30.0% | |
| GATAATCACCTTTCATCTTA+AGG | + | 37512:2466-2485 | None:intergenic | 30.0% | |
| GTATTCTAGATACCGAATAA+TGG | - | 37512:3410-3429 | MS.gene035837:intron | 30.0% | |
| TATTGCTGAATTGGATACAT+TGG | - | 37512:3858-3877 | MS.gene035837:CDS | 30.0% | |
| TATTTGTTCCTCAACAAGTT+TGG | - | 37512:3741-3760 | MS.gene035837:CDS | 30.0% | |
| TTAGATCTCAGAGAAAAAGA+TGG | + | 37512:2574-2593 | None:intergenic | 30.0% | |
| ! | CTATAACTGACTTTAGGTAA+GGG | - | 37512:2717-2736 | MS.gene035837:intron | 30.0% |
| ! | GTTTTCTACCTTAAGATGAA+AGG | - | 37512:2455-2474 | MS.gene035837:intron | 30.0% |
| ! | TCTATAACTGACTTTAGGTA+AGG | - | 37512:2716-2735 | MS.gene035837:intron | 30.0% |
| ! | TTTAACGGAGTTTTTGTGTT+TGG | - | 37512:2743-2762 | MS.gene035837:intron | 30.0% |
| AATGGGAGATGATGTTCATT+TGG | - | 37512:3428-3447 | MS.gene035837:intron | 35.0% | |
| AGATCTGTAATCACGAATCA+CGG | + | 37512:2342-2361 | None:intergenic | 35.0% | |
| ATATTGACACCTCTGATCAA+AGG | - | 37512:3110-3129 | MS.gene035837:intron | 35.0% | |
| GAACATCATCTCCCATTATT+CGG | + | 37512:3425-3444 | None:intergenic | 35.0% | |
| TAACATGTTCATCGTTACCA+CGG | + | 37512:2319-2338 | None:intergenic | 35.0% | |
| TATCTTGCTGAGTTTAAGAG+TGG | - | 37512:2491-2510 | MS.gene035837:intron | 35.0% | |
| TATTCATTAGGCTTTCGATG+AGG | - | 37512:3834-3853 | MS.gene035837:CDS | 35.0% | |
| TTGAACATAATCATGTGCGT+CGG | + | 37512:3159-3178 | None:intergenic | 35.0% | |
| ! | GAATACTAACCTGTTTTGCA+AGG | + | 37512:3396-3415 | None:intergenic | 35.0% |
| ! | GTGTTATTATTGCGTCAGTT+TGG | - | 37512:3214-3233 | MS.gene035837:intron | 35.0% |
| ! | TGCGATCTATAACTGACTTT+AGG | - | 37512:2711-2730 | MS.gene035837:intron | 35.0% |
| !! | GATGTGAATTTGTTAGGTTC+TGG | - | 37512:3695-3714 | MS.gene035837:CDS | 35.0% |
| ATATCATACCTGCATGTCAG+AGG | + | 37512:3950-3969 | None:intergenic | 40.0% | |
| ATTGGGAGAGGAATCATACA+AGG | - | 37512:3876-3895 | MS.gene035837:CDS | 40.0% | |
| TACTGCTTATAAAGCTGCTC+AGG | - | 37512:2547-2566 | MS.gene035837:intron | 40.0% | |
| TGAATTGGATACATTGGGAG+AGG | - | 37512:3864-3883 | MS.gene035837:CDS | 40.0% | |
| ! | TTGTTTGGGTTTCAGGATGA+TGG | - | 37512:4041-4060 | MS.gene035837:CDS | 40.0% |
| !! | ATGCTACACCAAACTTGTTG+AGG | + | 37512:3752-3771 | None:intergenic | 40.0% |
| ATCAAAGAAGCCGCACCAAA+AGG | - | 37512:4074-4093 | MS.gene035837:CDS | 45.0% | |
| ATGTAGACGAACTCTTCACG+CGG | + | 37512:2104-2123 | None:intergenic | 45.0% | |
| CATCTCTTCCATCGAACAGA+AGG | - | 37512:2286-2305 | MS.gene035837:CDS | 45.0% | |
| CGATGAGGCTATTGCTGAAT+TGG | - | 37512:3849-3868 | MS.gene035837:CDS | 45.0% | |
| GACCATCTCTTCGTAACGTT+CGG | + | 37512:2147-2166 | None:intergenic | 45.0% | |
| GCTTTCTTCCTTCTGTTCGA+TGG | + | 37512:2297-2316 | None:intergenic | 45.0% | |
| GTCGCCTACAAAAACGTCAT+CGG | - | 37512:2239-2258 | MS.gene035837:CDS | 45.0% | |
| TCCAAAGGGTGAGGTTATCA+CGG | + | 37512:3927-3946 | None:intergenic | 45.0% | |
| ! | CGAAGAGATGGTCGATTTCA+TGG | - | 37512:2154-2173 | MS.gene035837:intron | 45.0% |
| ! | GATGACGTTTTTGTAGGCGA+CGG | + | 37512:2240-2259 | None:intergenic | 45.0% |
| ! | TGCTCCGATGACGTTTTTGT+AGG | + | 37512:2246-2265 | None:intergenic | 45.0% |
| ! | TGCTGCTTCTGGTGATTCTA+AGG | - | 37512:2433-2452 | MS.gene035837:intron | 45.0% |
| ! | TTCGTAACGTTCGGCTTGTT+CGG | + | 37512:2138-2157 | None:intergenic | 45.0% |
| ! | TTGATTCCTTCTGCTGCTTC+TGG | - | 37512:2422-2441 | MS.gene035837:intron | 45.0% |
| AACTCTCCTGATCGTGCTTG+TGG | - | 37512:3370-3389 | MS.gene035837:intron | 50.0% | |
| AGAGCAAGACCAAGCCTGAT+TGG | + | 37512:3319-3338 | None:intergenic | 50.0% | |
| AGCCGAACGTTACGAAGAGA+TGG | - | 37512:2142-2161 | MS.gene035837:intron | 50.0% | |
| CTGCATGTCAGAGGTCCAAA+GGG | + | 37512:3941-3960 | None:intergenic | 50.0% | |
| GAACAGAAGGAAGAAAGCCG+TGG | - | 37512:2299-2318 | MS.gene035837:CDS | 50.0% | |
| GAATCACCAGAAGCAGCAGA+AGG | + | 37512:2431-2450 | None:intergenic | 50.0% | |
| GAGCAAGACCAAGCCTGATT+GGG | + | 37512:3318-3337 | None:intergenic | 50.0% | |
| GAGGAGGTTACGTTCTTCGA+CGG | + | 37512:2216-2235 | None:intergenic | 50.0% | |
| GCGTGAAGAGTTCGTCTACA+TGG | - | 37512:2103-2122 | MS.gene035837:CDS | 50.0% | |
| GGTGAGTTCTTCGCTTTCGA+CGG | + | 37512:2195-2214 | None:intergenic | 50.0% | |
| TACCACCAACTCACCCAATC+AGG | - | 37512:3302-3321 | MS.gene035837:intron | 50.0% | |
| TCCGTGATAACCTCACCCTT+TGG | - | 37512:3923-3942 | MS.gene035837:CDS | 50.0% | |
| ! | TGCTTGTGGCCTTGCAAAAC+AGG | - | 37512:3384-3403 | MS.gene035837:intron | 50.0% |
| ! | TGTGGGAGCTTTAGTGCAGT+GGG | - | 37512:3656-3675 | MS.gene035837:CDS | 50.0% |
| ! | TTGTGGGAGCTTTAGTGCAG+TGG | - | 37512:3655-3674 | MS.gene035837:CDS | 50.0% |
| ACGAACTCTTCACGCGGTGT+TGG | + | 37512:2098-2117 | None:intergenic | 55.0% | |
| CCAACTCACCCAATCAGGCT+TGG | - | 37512:3307-3326 | MS.gene035837:intron | 55.0% | |
| CCAAGCCTGATTGGGTGAGT+TGG | + | 37512:3310-3329 | None:intergenic | 55.0% | |
| CCAGACACGCCTTTGATCAG+AGG | + | 37512:3122-3141 | None:intergenic | 55.0% | |
| CCTGCATGTCAGAGGTCCAA+AGG | + | 37512:3942-3961 | None:intergenic | 55.0% | |
| CCTTTGGACCTCTGACATGC+AGG | - | 37512:3939-3958 | MS.gene035837:CDS | 55.0% | |
| GAGTTCTTCGCTTTCGACGG+CGG | + | 37512:2192-2211 | None:intergenic | 55.0% | |
| TGTCAGAGGTCCAAAGGGTG+AGG | + | 37512:3936-3955 | None:intergenic | 55.0% | |
| ! | AGCCTGATTGGGTGAGTTGG+TGG | + | 37512:3307-3326 | None:intergenic | 55.0% |
| ! | AGGCGTGTCTGGTTTCTGAC+AGG | - | 37512:3130-3149 | MS.gene035837:intron | 55.0% |
| ! | CCTCTGATCAAAGGCGTGTC+TGG | - | 37512:3119-3138 | MS.gene035837:intron | 55.0% |
| ! | CGTTTTTGTAGGCGACGGAG+AGG | + | 37512:2235-2254 | None:intergenic | 55.0% |
| ! | GCGTGTCTGGTTTCTGACAG+GGG | - | 37512:3132-3151 | MS.gene035837:intron | 55.0% |
| ! | GGCGTGTCTGGTTTCTGACA+GGG | - | 37512:3131-3150 | MS.gene035837:intron | 55.0% |
| ! | TACTGCTCATCGGCGCCTTT+TGG | + | 37512:4092-4111 | None:intergenic | 55.0% |
| ! | TTTTGTAGGCGACGGAGAGG+AGG | + | 37512:2232-2251 | None:intergenic | 55.0% |
| GCAAGGCCACAAGCACGATC+AGG | + | 37512:3379-3398 | None:intergenic | 60.0% | |
| TCGGAGCAAGACGTGCTTCG+TGG | - | 37512:2258-2277 | MS.gene035837:CDS | 60.0% | |
| TTCTTCGCTTTCGACGGCGG+CGG | + | 37512:2189-2208 | None:intergenic | 60.0% | |
| ! | CTCATCGGCGCCTTTTGGTG+CGG | + | 37512:4087-4106 | None:intergenic | 60.0% |
| !! | CTCTTCACGCGGTGTTGGTG+CGG | + | 37512:2093-2112 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 37512 | gene | 2083 | 4112 | 2083 | ID=MS.gene035837 |
| 37512 | mRNA | 2083 | 4112 | 2083 | ID=MS.gene035837.t1;Parent=MS.gene035837 |
| 37512 | exon | 3627 | 4112 | 3627 | ID=MS.gene035837.t1.exon1;Parent=MS.gene035837.t1 |
| 37512 | CDS | 3627 | 4112 | 3627 | ID=cds.MS.gene035837.t1;Parent=MS.gene035837.t1 |
| 37512 | exon | 2790 | 2912 | 2790 | ID=MS.gene035837.t1.exon2;Parent=MS.gene035837.t1 |
| 37512 | CDS | 2790 | 2912 | 2790 | ID=cds.MS.gene035837.t1;Parent=MS.gene035837.t1 |
| 37512 | exon | 2235 | 2351 | 2235 | ID=MS.gene035837.t1.exon3;Parent=MS.gene035837.t1 |
| 37512 | CDS | 2235 | 2351 | 2235 | ID=cds.MS.gene035837.t1;Parent=MS.gene035837.t1 |
| 37512 | exon | 2083 | 2139 | 2083 | ID=MS.gene035837.t1.exon4;Parent=MS.gene035837.t1 |
| 37512 | CDS | 2083 | 2139 | 2083 | ID=cds.MS.gene035837.t1;Parent=MS.gene035837.t1 |
| Gene Sequence |
| Protein sequence |
