Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066779.t1 | XP_003614051.1 | 99.6 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 7.40E-137 | 496.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066779.t1 | Q9C5W6 | 86.1 | 251 | 35 | 0 | 3 | 253 | 6 | 256 | 1.3e-116 | 420.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066779.t1 | G7JWT4 | 99.6 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 5.4e-137 | 496.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049844 | MS.gene066779 | 0.800944 | 1.14E-48 | -1.69E-46 |
| MS.gene050874 | MS.gene066779 | 0.817133 | 3.86E-52 | -1.69E-46 |
| MS.gene050875 | MS.gene066779 | 0.841234 | 5.38E-58 | -1.69E-46 |
| MS.gene051025 | MS.gene066779 | 0.809465 | 1.87E-50 | -1.69E-46 |
| MS.gene051914 | MS.gene066779 | 0.845499 | 3.91E-59 | -1.69E-46 |
| MS.gene052169 | MS.gene066779 | 0.831683 | 1.45E-55 | -1.69E-46 |
| MS.gene053173 | MS.gene066779 | 0.809492 | 1.84E-50 | -1.69E-46 |
| MS.gene054018 | MS.gene066779 | 0.850411 | 1.73E-60 | -1.69E-46 |
| MS.gene054459 | MS.gene066779 | 0.810909 | 9.12E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene066779 | 0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene066779 | 0.809526 | 1.81E-50 | -1.69E-46 |
| MS.gene054662 | MS.gene066779 | 0.953201 | 4.61E-111 | -1.69E-46 |
| MS.gene05640 | MS.gene066779 | 0.812195 | 4.79E-51 | -1.69E-46 |
| MS.gene05652 | MS.gene066779 | 0.817358 | 3.44E-52 | -1.69E-46 |
| MS.gene05732 | MS.gene066779 | 0.803243 | 3.83E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene066779 | 0.84938 | 3.36E-60 | -1.69E-46 |
| MS.gene060291 | MS.gene066779 | 0.816937 | 4.27E-52 | -1.69E-46 |
| MS.gene06080 | MS.gene066779 | 0.808126 | 3.61E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene066779 | 0.847143 | 1.39E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066779 | MS.gene013133 | PPI |
| MS.gene066779 | MS.gene028807 | PPI |
| MS.gene066779 | MS.gene013047 | PPI |
| MS.gene066779 | MS.gene64150 | PPI |
| MS.gene066779 | MS.gene050079 | PPI |
| MS.gene066779 | MS.gene38593 | PPI |
| MS.gene066779 | MS.gene020411 | PPI |
| MS.gene066779 | MS.gene043907 | PPI |
| MS.gene066779 | MS.gene48435 | PPI |
| MS.gene066779 | MS.gene010179 | PPI |
| MS.gene066779 | MS.gene055488 | PPI |
| MS.gene066779 | MS.gene010180 | PPI |
| MS.gene066779 | MS.gene54847 | PPI |
| MS.gene066779 | MS.gene035837 | PPI |
| MS.gene066779 | MS.gene043514 | PPI |
| MS.gene066779 | MS.gene052176 | PPI |
| MS.gene066779 | MS.gene31370 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066779.t1 | MTR_5g044160 | 99.614 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 0.0 | 531 |
| MS.gene066779.t1 | MTR_4g083060 | 89.147 | 258 | 27 | 1 | 1 | 258 | 1 | 257 | 5.71e-174 | 481 |
| MS.gene066779.t1 | MTR_2g091225 | 75.502 | 249 | 60 | 1 | 1 | 249 | 1 | 248 | 1.69e-142 | 400 |
| MS.gene066779.t1 | MTR_8g086270 | 76.735 | 245 | 57 | 0 | 1 | 245 | 1 | 245 | 3.16e-141 | 397 |
| MS.gene066779.t1 | MTR_2g076960 | 73.790 | 248 | 65 | 0 | 2 | 249 | 3 | 250 | 1.40e-138 | 390 |
| MS.gene066779.t1 | MTR_2g015980 | 75.309 | 243 | 58 | 2 | 11 | 253 | 9 | 249 | 3.37e-135 | 382 |
| MS.gene066779.t1 | MTR_2g091225 | 76.000 | 225 | 53 | 1 | 25 | 249 | 2 | 225 | 2.74e-129 | 366 |
| MS.gene066779.t1 | MTR_3g099380 | 70.817 | 257 | 72 | 3 | 2 | 256 | 3 | 258 | 1.75e-127 | 362 |
| MS.gene066779.t1 | MTR_5g064580 | 68.627 | 255 | 75 | 2 | 2 | 254 | 3 | 254 | 6.30e-124 | 353 |
| MS.gene066779.t1 | MTR_3g100620 | 66.809 | 235 | 75 | 1 | 7 | 238 | 11 | 245 | 2.16e-113 | 326 |
| MS.gene066779.t1 | MTR_3g099380 | 68.657 | 201 | 61 | 2 | 2 | 200 | 3 | 203 | 3.25e-95 | 278 |
| MS.gene066779.t1 | MTR_0137s0020 | 52.542 | 236 | 102 | 5 | 7 | 237 | 11 | 241 | 4.81e-74 | 226 |
| MS.gene066779.t1 | MTR_3g014060 | 52.119 | 236 | 103 | 5 | 7 | 237 | 11 | 241 | 3.06e-73 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066779.t1 | AT1G26480 | 84.231 | 260 | 36 | 1 | 2 | 256 | 5 | 264 | 1.11e-162 | 451 |
| MS.gene066779.t1 | AT1G34760 | 79.835 | 243 | 48 | 1 | 4 | 246 | 2 | 243 | 1.06e-143 | 403 |
| MS.gene066779.t1 | AT1G34760 | 79.835 | 243 | 48 | 1 | 4 | 246 | 2 | 243 | 1.19e-143 | 403 |
| MS.gene066779.t1 | AT2G42590 | 74.219 | 256 | 65 | 1 | 1 | 255 | 1 | 256 | 6.91e-141 | 396 |
| MS.gene066779.t1 | AT2G42590 | 74.219 | 256 | 65 | 1 | 1 | 255 | 1 | 256 | 7.30e-141 | 397 |
| MS.gene066779.t1 | AT2G42590 | 73.725 | 255 | 67 | 0 | 1 | 255 | 1 | 255 | 1.60e-139 | 392 |
| MS.gene066779.t1 | AT1G22300 | 74.400 | 250 | 64 | 0 | 4 | 253 | 2 | 251 | 2.06e-135 | 382 |
| MS.gene066779.t1 | AT1G22300 | 74.400 | 250 | 64 | 0 | 4 | 253 | 2 | 251 | 3.61e-135 | 381 |
| MS.gene066779.t1 | AT1G22300 | 76.250 | 240 | 57 | 0 | 4 | 243 | 2 | 241 | 6.60e-134 | 378 |
| MS.gene066779.t1 | AT1G35160 | 72.619 | 252 | 67 | 2 | 7 | 256 | 11 | 262 | 2.17e-127 | 362 |
| MS.gene066779.t1 | AT3G02520 | 71.705 | 258 | 65 | 3 | 7 | 256 | 5 | 262 | 3.07e-127 | 362 |
| MS.gene066779.t1 | AT3G02520 | 71.705 | 258 | 65 | 3 | 7 | 256 | 5 | 262 | 3.07e-127 | 362 |
| MS.gene066779.t1 | AT5G38480 | 71.429 | 252 | 70 | 2 | 7 | 256 | 4 | 255 | 5.13e-127 | 361 |
| MS.gene066779.t1 | AT1G78300 | 69.804 | 255 | 75 | 2 | 7 | 259 | 5 | 259 | 1.49e-125 | 357 |
| MS.gene066779.t1 | AT5G38480 | 72.800 | 250 | 63 | 4 | 7 | 254 | 4 | 250 | 2.47e-125 | 356 |
| MS.gene066779.t1 | AT5G38480 | 72.800 | 250 | 63 | 4 | 7 | 254 | 4 | 250 | 2.47e-125 | 356 |
| MS.gene066779.t1 | AT4G09000 | 71.138 | 246 | 69 | 2 | 2 | 245 | 5 | 250 | 4.37e-124 | 354 |
| MS.gene066779.t1 | AT1G35160 | 75.214 | 234 | 56 | 2 | 7 | 238 | 11 | 244 | 1.77e-123 | 353 |
| MS.gene066779.t1 | AT4G09000 | 72.803 | 239 | 63 | 2 | 2 | 238 | 5 | 243 | 1.28e-121 | 349 |
| MS.gene066779.t1 | AT5G16050 | 66.288 | 264 | 79 | 2 | 1 | 254 | 1 | 264 | 3.53e-120 | 344 |
| MS.gene066779.t1 | AT5G16050 | 66.288 | 264 | 79 | 2 | 1 | 254 | 1 | 264 | 3.53e-120 | 344 |
| MS.gene066779.t1 | AT5G65430 | 66.397 | 247 | 80 | 1 | 1 | 244 | 1 | 247 | 1.80e-115 | 331 |
| MS.gene066779.t1 | AT5G65430 | 66.803 | 244 | 78 | 1 | 1 | 241 | 1 | 244 | 1.94e-115 | 331 |
| MS.gene066779.t1 | AT5G65430 | 67.220 | 241 | 76 | 1 | 1 | 238 | 1 | 241 | 4.07e-114 | 328 |
| MS.gene066779.t1 | AT5G10450 | 65.021 | 243 | 82 | 1 | 1 | 240 | 1 | 243 | 2.56e-113 | 326 |
| MS.gene066779.t1 | AT5G10450 | 64.754 | 244 | 83 | 1 | 1 | 241 | 1 | 244 | 3.43e-113 | 325 |
| MS.gene066779.t1 | AT5G10450 | 65.145 | 241 | 81 | 1 | 1 | 238 | 1 | 241 | 1.93e-112 | 324 |
| MS.gene066779.t1 | AT5G10450 | 65.145 | 241 | 81 | 1 | 1 | 238 | 1 | 241 | 4.83e-112 | 323 |
| MS.gene066779.t1 | AT1G78220 | 51.709 | 234 | 112 | 1 | 4 | 236 | 2 | 235 | 3.45e-83 | 249 |
| MS.gene066779.t1 | AT1G22290 | 49.537 | 216 | 85 | 5 | 4 | 214 | 2 | 198 | 5.65e-60 | 189 |
| MS.gene066779.t1 | AT1G22290 | 49.296 | 213 | 84 | 5 | 4 | 211 | 2 | 195 | 1.79e-59 | 187 |
| MS.gene066779.t1 | AT2G10450 | 59.574 | 47 | 19 | 0 | 204 | 250 | 16 | 62 | 2.20e-12 | 61.6 |
Find 60 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCGATTGCTTACCTTTC+AGG | 0.105745 | 5.2:-34512129 | None:intergenic |
| CAGAATATCACCACAGATTT+TGG | 0.109197 | 5.2:-34511055 | None:intergenic |
| TGAGCAGAAGGAGGAGTCTA+AGG | 0.249783 | 5.2:+34510972 | MS.gene066779:CDS |
| GCAGGAAAGGGGATTATTTC+CGG | 0.289859 | 5.2:+34511834 | MS.gene066779:intron |
| CGCCTCATCAAAAGCTTGTT+TGG | 0.319773 | 5.2:-34512237 | None:intergenic |
| TACCTCAGGCTCAGCGGGTT+TGG | 0.338393 | 5.2:-34512894 | None:intergenic |
| AGAGTTCCTCCTCAACCTTT+TGG | 0.345006 | 5.2:-34511032 | None:intergenic |
| CAAAAGCTTGTTTGGCCAAA+TGG | 0.349323 | 5.2:-34512229 | None:intergenic |
| AACTTACAGGGCCTGCCATT+TGG | 0.370260 | 5.2:+34512214 | MS.gene066779:intron |
| TTCATATCTTTCAGCTTGTT+CGG | 0.370539 | 5.2:-34510023 | None:intergenic |
| GAGAGAGACCCAAGTTTACT+TGG | 0.378465 | 5.2:+34509991 | MS.gene066779:CDS |
| GACAATTATTGACCAGCATC+TGG | 0.387445 | 5.2:+34511077 | MS.gene066779:CDS |
| AATCAGAGGTCCAGAGAGTC+AGG | 0.404705 | 5.2:-34512334 | None:intergenic |
| AAAGCTTGGCCAAGTAAACT+TGG | 0.423724 | 5.2:-34510000 | None:intergenic |
| TTCAGCTTGTTCGGAAAGCT+TGG | 0.436972 | 5.2:-34510014 | None:intergenic |
| TGAGAGACAACCTGACTCTC+TGG | 0.448857 | 5.2:+34512324 | MS.gene066779:CDS |
| AGCTTGTTTGGCCAAATGGC+AGG | 0.464126 | 5.2:-34512225 | None:intergenic |
| TGATGAGGCGATTGCAGAGT+TGG | 0.469932 | 5.2:+34512250 | MS.gene066779:CDS |
| AGACGGATTGGATGTGTTGA+TGG | 0.480349 | 5.2:-34512057 | None:intergenic |
| GCTTCTGCCGAGGTGGAAGC+AGG | 0.494681 | 5.2:-34511102 | None:intergenic |
| ATACATACCTCAGGCTCAGC+GGG | 0.501637 | 5.2:-34512899 | None:intergenic |
| ACCTCTGATTTGCCAGAGGA+TGG | 0.501755 | 5.2:+34512347 | MS.gene066779:CDS |
| GATCAAGAGTTACTGCCAAA+AGG | 0.518570 | 5.2:+34511017 | MS.gene066779:CDS |
| GAACAAGCTGAAAGATATGA+AGG | 0.522838 | 5.2:+34510025 | MS.gene066779:CDS |
| TCTTGAACTCAGCAAGATAC+CGG | 0.525675 | 5.2:-34511853 | None:intergenic |
| TTGGTGCACGAAGAGCTTCA+TGG | 0.527662 | 5.2:+34510932 | MS.gene066779:CDS |
| CTCCTCCTTCTGCTCAATTG+AGG | 0.527914 | 5.2:-34510965 | None:intergenic |
| GAGTTACTGCCAAAAGGTTG+AGG | 0.532495 | 5.2:+34511023 | MS.gene066779:CDS |
| TATCCCTTACCTCCATCCTC+TGG | 0.533069 | 5.2:-34512359 | None:intergenic |
| TGGAAGCAGGAACCAGATGC+TGG | 0.540094 | 5.2:-34511089 | None:intergenic |
| TCAACACATCCAATCCGTCT+TGG | 0.541520 | 5.2:+34512060 | MS.gene066779:CDS |
| GAGAGGAACCTCCTCTCAGT+TGG | 0.543164 | 5.2:+34510895 | MS.gene066779:CDS |
| AGTGCAAGTCCAAGACGGAT+TGG | 0.548630 | 5.2:-34512069 | None:intergenic |
| AAGATCAGTGTTTGCAGTGG+CGG | 0.557206 | 5.2:-34512034 | None:intergenic |
| GACTGACCAAGAGAGAAAAG+AGG | 0.559564 | 5.2:+34511874 | MS.gene066779:CDS |
| TATGTCCTCAATTGAGCAGA+AGG | 0.567548 | 5.2:+34510960 | MS.gene066779:CDS |
| AACATTAGCTTCTGCCGAGG+TGG | 0.575120 | 5.2:-34511109 | None:intergenic |
| AGCCAAACCCGCTGAGCCTG+AGG | 0.586083 | 5.2:+34512892 | MS.gene066779:CDS |
| CTTGAGTGAAGAGTCGTACA+AGG | 0.586539 | 5.2:+34512277 | MS.gene066779:CDS |
| TTGAACTAACTGTGGAAGAG+AGG | 0.589747 | 5.2:+34510878 | MS.gene066779:CDS |
| GAGCAGAAGGAGGAGTCTAA+GGG | 0.589752 | 5.2:+34510973 | MS.gene066779:CDS |
| CTGGACCTCTGATTTGCCAG+AGG | 0.595427 | 5.2:+34512343 | MS.gene066779:CDS |
| GGTTGAATGTATGAAGAAAG+TGG | 0.595766 | 5.2:+34510843 | MS.gene066779:CDS |
| GCTGCTGAGCAGTCACTGAA+AGG | 0.600437 | 5.2:+34511896 | MS.gene066779:CDS |
| AGATTATGAACTCTCCTGAA+AGG | 0.605075 | 5.2:+34512115 | MS.gene066779:CDS |
| CTTGTACGACTCTTCACTCA+AGG | 0.608037 | 5.2:-34512276 | None:intergenic |
| AAGCTTGGCCAAGTAAACTT+GGG | 0.611139 | 5.2:-34509999 | None:intergenic |
| TCCATCCTCTGGCAAATCAG+AGG | 0.621846 | 5.2:-34512348 | None:intergenic |
| GAGGAACTCTCCAAAATCTG+TGG | 0.639940 | 5.2:+34511045 | MS.gene066779:CDS |
| TCTGATTTGCCAGAGGATGG+AGG | 0.645454 | 5.2:+34512350 | MS.gene066779:CDS |
| ACTTGATGTTGAACTAACTG+TGG | 0.647498 | 5.2:+34510870 | MS.gene066779:CDS |
| TTACTGCCAAAAGGTTGAGG+AGG | 0.652188 | 5.2:+34511026 | MS.gene066779:CDS |
| AGTTGAGTGCAAGTCCAAGA+CGG | 0.652366 | 5.2:-34512074 | None:intergenic |
| GTCCTCAATTGAGCAGAAGG+AGG | 0.654997 | 5.2:+34510963 | MS.gene066779:CDS |
| GGTCTCTCTCTCTTTCTCAG+CGG | 0.674609 | 5.2:-34509978 | None:intergenic |
| GAAAACATTAGCTTCTGCCG+AGG | 0.676043 | 5.2:-34511112 | None:intergenic |
| TCTGGTTCCTGCTTCCACCT+CGG | 0.676873 | 5.2:+34511095 | MS.gene066779:CDS |
| TATACATACCTCAGGCTCAG+CGG | 0.690490 | 5.2:-34512900 | None:intergenic |
| TGGAAGATCAGTGTTTGCAG+TGG | 0.713574 | 5.2:-34512037 | None:intergenic |
| GCAGTCACTGAAAGGATACG+AGG | 0.737880 | 5.2:+34511904 | MS.gene066779:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGCTTTTAAAAATTA+GGG | + | chr5.2:34512438-34512457 | MS.gene066779:intron | 10.0% |
| !! | AAAAATTACGTGTTTAATAA+TGG | - | chr5.2:34510696-34510715 | None:intergenic | 15.0% |
| !! | AAAATAATATGTCTACTAAA+AGG | - | chr5.2:34511260-34511279 | None:intergenic | 15.0% |
| !! | AATATGTTATCTAAAAATGT+TGG | + | chr5.2:34510439-34510458 | MS.gene066779:intron | 15.0% |
| !! | TGTACATTCATAATAAATTA+TGG | + | chr5.2:34510488-34510507 | MS.gene066779:intron | 15.0% |
| !!! | AAAAACATAATGTCAAATTT+TGG | - | chr5.2:34513118-34513137 | None:intergenic | 15.0% |
| !!! | AAAACATAATGTCAAATTTT+GGG | - | chr5.2:34513117-34513136 | None:intergenic | 15.0% |
| !!! | AAAGATTTGATTTTTTGATT+TGG | + | chr5.2:34510169-34510188 | MS.gene066779:intron | 15.0% |
| !!! | AAATTCTTTTAAGTGAAAAA+AGG | + | chr5.2:34513029-34513048 | MS.gene066779:intron | 15.0% |
| !!! | AAGATTTGATTTTTTGATTT+GGG | + | chr5.2:34510170-34510189 | MS.gene066779:intron | 15.0% |
| !!! | AATTCTTTTAAGTGAAAAAA+GGG | + | chr5.2:34513030-34513049 | MS.gene066779:intron | 15.0% |
| !!! | AATTTTTAAAAGCAAAAAAC+TGG | - | chr5.2:34512437-34512456 | None:intergenic | 15.0% |
| !!! | CATTAATAAATTATTTCTGA+TGG | + | chr5.2:34511952-34511971 | MS.gene066779:intron | 15.0% |
| !!! | GTTTTTTGCTTTTAAAAATT+AGG | + | chr5.2:34512437-34512456 | MS.gene066779:intron | 15.0% |
| !!! | TTTTATTTTAATTTTGAAGG+TGG | + | chr5.2:34510260-34510279 | MS.gene066779:intron | 15.0% |
| !! | AAAGTATAGGTATATATTGT+TGG | + | chr5.2:34512516-34512535 | MS.gene066779:intron | 20.0% |
| !! | AAGTATAGGTATATATTGTT+GGG | + | chr5.2:34512517-34512536 | MS.gene066779:intron | 20.0% |
| !! | AGATATAGATACTACATTAT+AGG | + | chr5.2:34511522-34511541 | MS.gene066779:intron | 20.0% |
| !! | ATAATAAATTATGGATGTGT+TGG | + | chr5.2:34510497-34510516 | MS.gene066779:intron | 20.0% |
| !! | ATCTTCTAAATTGAGAAATT+TGG | + | chr5.2:34510413-34510432 | MS.gene066779:intron | 20.0% |
| !! | ATTGAACAATTCACTTTAAA+AGG | - | chr5.2:34510570-34510589 | None:intergenic | 20.0% |
| !! | TTACTATAGATCTATAACTA+TGG | - | chr5.2:34512984-34513003 | None:intergenic | 20.0% |
| !!! | AAACATAATGTCAAATTTTG+GGG | - | chr5.2:34513116-34513135 | None:intergenic | 20.0% |
| !!! | AAATTATACAGTTTTCAACA+TGG | - | chr5.2:34510772-34510791 | None:intergenic | 20.0% |
| !!! | CTTTGAATTCTAGTTAATTA+TGG | + | chr5.2:34511494-34511513 | MS.gene066779:intron | 20.0% |
| !!! | GTAATTAAGCTTTTGTTATT+TGG | + | chr5.2:34512782-34512801 | MS.gene066779:intron | 20.0% |
| !!! | TGTTATTTTTTAATGGGTTT+GGG | + | chr5.2:34510063-34510082 | MS.gene066779:intron | 20.0% |
| !!! | TTGTTATTTTTTAATGGGTT+TGG | + | chr5.2:34510062-34510081 | MS.gene066779:intron | 20.0% |
| ! | AAAATAAGCATAAGGAAATC+AGG | - | chr5.2:34511811-34511830 | None:intergenic | 25.0% |
| ! | AAATAAGCATAAGGAAATCA+GGG | - | chr5.2:34511810-34511829 | None:intergenic | 25.0% |
| ! | AAGAGATTTCATATCACATA+AGG | - | chr5.2:34511758-34511777 | None:intergenic | 25.0% |
| ! | AGTTAGGAGTTTAATAAACA+AGG | - | chr5.2:34511604-34511623 | None:intergenic | 25.0% |
| ! | ATCAAATCAAACAAGTAACA+CGG | - | chr5.2:34510374-34510393 | None:intergenic | 25.0% |
| ! | ATGTATTCAATATGCAGAAA+TGG | + | chr5.2:34510822-34510841 | MS.gene066779:intron | 25.0% |
| ! | ATTAAAAATCTTGGATCTCA+GGG | - | chr5.2:34512472-34512491 | None:intergenic | 25.0% |
| ! | CATTATAGGTTATAGATTAC+AGG | + | chr5.2:34511536-34511555 | MS.gene066779:intron | 25.0% |
| ! | GCTTAATTACACAATTAACT+AGG | - | chr5.2:34512772-34512791 | None:intergenic | 25.0% |
| ! | GTTAGGAGTTTAATAAACAA+GGG | - | chr5.2:34511603-34511622 | None:intergenic | 25.0% |
| ! | GTTTCTATCTATTGTCTAAA+TGG | + | chr5.2:34512182-34512201 | MS.gene066779:intron | 25.0% |
| !! | AACATAATGTCAAATTTTGG+GGG | - | chr5.2:34513115-34513134 | None:intergenic | 25.0% |
| !! | AGATCAATCATTTTCTAGAT+TGG | + | chr5.2:34510210-34510229 | MS.gene066779:intron | 25.0% |
| !!! | CTGTTTTTTTGTTGTGATTT+GGG | + | chr5.2:34510123-34510142 | MS.gene066779:intron | 25.0% |
| !!! | TCACAACTGTTTTGATTATT+AGG | + | chr5.2:34512005-34512024 | MS.gene066779:intron | 25.0% |
| !!! | TCTGTTTTTTTGTTGTGATT+TGG | + | chr5.2:34510122-34510141 | MS.gene066779:intron | 25.0% |
| !!! | TTTGATTTGATGCTTAGATT+AGG | + | chr5.2:34510383-34510402 | MS.gene066779:intron | 25.0% |
| AAACATAGAATCTGTATGAC+TGG | + | chr5.2:34511309-34511328 | MS.gene066779:intron | 30.0% | |
| AAAGGTTAATACTCTCTTAC+AGG | + | chr5.2:34512845-34512864 | MS.gene066779:intron | 30.0% | |
| AAATTAATCTTCCCCTGATA+CGG | - | chr5.2:34510720-34510739 | None:intergenic | 30.0% | |
| ACAACAGTAATGACTAATGA+TGG | + | chr5.2:34510608-34510627 | MS.gene066779:intron | 30.0% | |
| ACCTATACTTTCAATGTGTT+TGG | - | chr5.2:34512507-34512526 | None:intergenic | 30.0% | |
| AGTAGGACTTAATCATGAAA+CGG | - | chr5.2:34511396-34511415 | None:intergenic | 30.0% | |
| ATAGGTATATATTGTTGGGT+AGG | + | chr5.2:34512521-34512540 | MS.gene066779:intron | 30.0% | |
| ATGATAAGGACTACGAAATA+TGG | + | chr5.2:34511646-34511665 | MS.gene066779:intron | 30.0% | |
| ATTTATCGCTATCTTCGTTA+TGG | + | chr5.2:34511223-34511242 | MS.gene066779:intron | 30.0% | |
| CAACAGTAATGACTAATGAT+GGG | + | chr5.2:34510609-34510628 | MS.gene066779:intron | 30.0% | |
| GATTAAAAATCTTGGATCTC+AGG | - | chr5.2:34512473-34512492 | None:intergenic | 30.0% | |
| GTTGGATATAAAAACGTCAT+TGG | + | chr5.2:34510913-34510932 | MS.gene066779:CDS | 30.0% | |
| TACTTTCAATGTGTTTGGTT+TGG | - | chr5.2:34512502-34512521 | None:intergenic | 30.0% | |
| TATAGGGTTTCAGATAAAGA+TGG | + | chr5.2:34511459-34511478 | MS.gene066779:intron | 30.0% | |
| TATATTCCGCTCAAGTTATA+GGG | + | chr5.2:34511443-34511462 | MS.gene066779:intron | 30.0% | |
| TCTATCTATTGTCTAAATGG+TGG | + | chr5.2:34512185-34512204 | MS.gene066779:intron | 30.0% | |
| TGGATAATTTATCCAATAGC+AGG | - | chr5.2:34512698-34512717 | None:intergenic | 30.0% | |
| TGTGATATGAAATCTCTTTC+TGG | + | chr5.2:34511760-34511779 | MS.gene066779:intron | 30.0% | |
| TTATATTCCGCTCAAGTTAT+AGG | + | chr5.2:34511442-34511461 | MS.gene066779:intron | 30.0% | |
| ! | ACAATATGACTATGGTTTTC+TGG | - | chr5.2:34512718-34512737 | None:intergenic | 30.0% |
| ! | ACCAAACACATTGAAAGTAT+AGG | + | chr5.2:34512503-34512522 | MS.gene066779:intron | 30.0% |
| ! | ACGTAATTTTTACCGTATCA+GGG | + | chr5.2:34510705-34510724 | MS.gene066779:intron | 30.0% |
| ! | GAGATCCAAGATTTTTAATC+TGG | + | chr5.2:34512473-34512492 | MS.gene066779:intron | 30.0% |
| ! | TTATTGATGTGTCATTGTGT+TGG | + | chr5.2:34510344-34510363 | MS.gene066779:intron | 30.0% |
| ! | TTCACTGTTAGATTCTAGTT+AGG | - | chr5.2:34511620-34511639 | None:intergenic | 30.0% |
| ! | TTCATATCTTTCAGCTTGTT+CGG | - | chr5.2:34510026-34510045 | None:intergenic | 30.0% |
| !! | ATTTTGGGGGTAGAAATTAA+TGG | - | chr5.2:34513102-34513121 | None:intergenic | 30.0% |
| !! | GGTATGTATAAGATTGGTTT+CGG | + | chr5.2:34512913-34512932 | MS.gene066779:intron | 30.0% |
| !! | TTACGTGTTTAATAATGGAC+TGG | - | chr5.2:34510691-34510710 | None:intergenic | 30.0% |
| !!! | CCTAATTTTTTGACAAGGTT+GGG | - | chr5.2:34512651-34512670 | None:intergenic | 30.0% |
| !!! | CTAATTTTTTGACAAGGTTG+GGG | - | chr5.2:34512650-34512669 | None:intergenic | 30.0% |
| !!! | CTCATCCTAATTTTTTGACA+AGG | - | chr5.2:34512656-34512675 | None:intergenic | 30.0% |
| !!! | TCCTAATTTTTTGACAAGGT+TGG | - | chr5.2:34512652-34512671 | None:intergenic | 30.0% |
| AATTTCAACGACGCAATCAA+AGG | - | chr5.2:34510531-34510550 | None:intergenic | 35.0% | |
| ACAGTGAAGAACTCATGATA+AGG | + | chr5.2:34511632-34511651 | MS.gene066779:intron | 35.0% | |
| ACCAATCTTATACATACCTC+AGG | - | chr5.2:34512911-34512930 | None:intergenic | 35.0% | |
| ACTTGATGTTGAACTAACTG+TGG | + | chr5.2:34510870-34510889 | MS.gene066779:CDS | 35.0% | |
| AGATTATGAACTCTCCTGAA+AGG | + | chr5.2:34512115-34512134 | MS.gene066779:CDS | 35.0% | |
| AGGTGGATAACAAATATGCA+AGG | - | chr5.2:34511360-34511379 | None:intergenic | 35.0% | |
| ATTTCAACGACGCAATCAAA+GGG | - | chr5.2:34510530-34510549 | None:intergenic | 35.0% | |
| CAAAAAACTGGAGATCTTGA+AGG | - | chr5.2:34512425-34512444 | None:intergenic | 35.0% | |
| CCCAACCTTGTCAAAAAATT+AGG | + | chr5.2:34512648-34512667 | MS.gene066779:intron | 35.0% | |
| CCTGCATCAAAATAAGCATA+AGG | - | chr5.2:34511819-34511838 | None:intergenic | 35.0% | |
| GAACAAGCTGAAAGATATGA+AGG | + | chr5.2:34510025-34510044 | MS.gene066779:CDS | 35.0% | |
| GAAGATAGCGATAAATCTGA+TGG | - | chr5.2:34511219-34511238 | None:intergenic | 35.0% | |
| GGCATCCAGATTAAAAATCT+TGG | - | chr5.2:34512481-34512500 | None:intergenic | 35.0% | |
| GGTTGAATGTATGAAGAAAG+TGG | + | chr5.2:34510843-34510862 | MS.gene066779:CDS | 35.0% | |
| GTAGGACTTAATCATGAAAC+GGG | - | chr5.2:34511395-34511414 | None:intergenic | 35.0% | |
| GTATATATTGTTGGGTAGGT+TGG | + | chr5.2:34512525-34512544 | MS.gene066779:intron | 35.0% | |
| GTGATGTTATAGACCCAAAT+TGG | + | chr5.2:34510665-34510684 | MS.gene066779:intron | 35.0% | |
| TCCAATGACTCATTCATAGT+AGG | - | chr5.2:34511413-34511432 | None:intergenic | 35.0% | |
| TCCTACTATGAATGAGTCAT+TGG | + | chr5.2:34511409-34511428 | MS.gene066779:intron | 35.0% | |
| TGATGCTTAGATTAGGAAAC+TGG | + | chr5.2:34510390-34510409 | MS.gene066779:intron | 35.0% | |
| TTAATACTCTCTTACAGGTG+AGG | + | chr5.2:34512850-34512869 | MS.gene066779:intron | 35.0% | |
| TTGGGTCTATAACATCACTT+TGG | - | chr5.2:34510663-34510682 | None:intergenic | 35.0% | |
| ! | ATGGTGGTGATAAAACTTAC+AGG | + | chr5.2:34512201-34512220 | MS.gene066779:intron | 35.0% |
| ! | CACGTAATTTTTACCGTATC+AGG | + | chr5.2:34510704-34510723 | MS.gene066779:intron | 35.0% |
| ! | CAGAATATCACCACAGATTT+TGG | - | chr5.2:34511058-34511077 | None:intergenic | 35.0% |
| ! | CGTAATTTTTACCGTATCAG+GGG | + | chr5.2:34510706-34510725 | MS.gene066779:intron | 35.0% |
| ! | CGTTTTTATATCCAACTGAG+AGG | - | chr5.2:34510909-34510928 | None:intergenic | 35.0% |
| ! | CTAATGATGGGAATTATGCT+TGG | + | chr5.2:34510621-34510640 | MS.gene066779:intron | 35.0% |
| ! | CTCTGGAAACAATATGACTA+TGG | - | chr5.2:34512726-34512745 | None:intergenic | 35.0% |
| ! | TCCTACTAAAGAGGTTCTAA+AGG | + | chr5.2:34512827-34512846 | MS.gene066779:intron | 35.0% |
| ! | TGGTGGTGATAAAACTTACA+GGG | + | chr5.2:34512202-34512221 | MS.gene066779:intron | 35.0% |
| ! | TTTTATATCCAACTGAGAGG+AGG | - | chr5.2:34510906-34510925 | None:intergenic | 35.0% |
| !! | AATAATGGACTGGCCAATTT+GGG | - | chr5.2:34510681-34510700 | None:intergenic | 35.0% |
| !! | ACCTTTAGAACCTCTTTAGT+AGG | - | chr5.2:34512831-34512850 | None:intergenic | 35.0% |
| !! | TAATAATGGACTGGCCAATT+TGG | - | chr5.2:34510682-34510701 | None:intergenic | 35.0% |
| !! | TTGCATATTTGTTATCCACC+TGG | + | chr5.2:34511359-34511378 | MS.gene066779:intron | 35.0% |
| !! | TTTGGCTTCTTCAGCTTTTA+TGG | - | chr5.2:34512879-34512898 | None:intergenic | 35.0% |
| !!! | CCTTATGCTTATTTTGATGC+AGG | + | chr5.2:34511816-34511835 | MS.gene066779:intron | 35.0% |
| !!! | CTTATTTTGATGCAGGAAAG+GGG | + | chr5.2:34511823-34511842 | MS.gene066779:intron | 35.0% |
| !!! | GCTTATTTTGATGCAGGAAA+GGG | + | chr5.2:34511822-34511841 | MS.gene066779:intron | 35.0% |
| !!! | TGCTTATTTTGATGCAGGAA+AGG | + | chr5.2:34511821-34511840 | MS.gene066779:intron | 35.0% |
| AAAGCTTGGCCAAGTAAACT+TGG | - | chr5.2:34510003-34510022 | None:intergenic | 40.0% | |
| AAATCTGATGGCCAACAAGT+CGG | - | chr5.2:34511207-34511226 | None:intergenic | 40.0% | |
| AAGCTTGGCCAAGTAAACTT+GGG | - | chr5.2:34510002-34510021 | None:intergenic | 40.0% | |
| CATAGAATCTGTATGACTGG+TGG | + | chr5.2:34511312-34511331 | MS.gene066779:intron | 40.0% | |
| CGATTCTCTCATACTTTGCA+TGG | + | chr5.2:34512146-34512165 | MS.gene066779:intron | 40.0% | |
| CTGAAACCCTATAACTTGAG+CGG | - | chr5.2:34511452-34511471 | None:intergenic | 40.0% | |
| GAATCGATTGCTTACCTTTC+AGG | - | chr5.2:34512132-34512151 | None:intergenic | 40.0% | |
| GACAATTATTGACCAGCATC+TGG | + | chr5.2:34511077-34511096 | MS.gene066779:CDS | 40.0% | |
| GATCAAGAGTTACTGCCAAA+AGG | + | chr5.2:34511017-34511036 | MS.gene066779:CDS | 40.0% | |
| GATTACTCTTGCGGTGATTA+GGG | - | chr5.2:34512605-34512624 | None:intergenic | 40.0% | |
| GCCTGAGGTATGTATAAGAT+TGG | + | chr5.2:34512907-34512926 | MS.gene066779:intron | 40.0% | |
| GGACTACGAAATATGGAAAC+TGG | + | chr5.2:34511653-34511672 | MS.gene066779:intron | 40.0% | |
| TAAGAAACTGTGCCTGCTAT+TGG | + | chr5.2:34512683-34512702 | MS.gene066779:intron | 40.0% | |
| TAGAACTGCTCCTACTAAAG+AGG | + | chr5.2:34512818-34512837 | MS.gene066779:intron | 40.0% | |
| TATGTCCTCAATTGAGCAGA+AGG | + | chr5.2:34510960-34510979 | MS.gene066779:CDS | 40.0% | |
| TCACTAGAAGAAACTCACTC+TGG | - | chr5.2:34512743-34512762 | None:intergenic | 40.0% | |
| TCTTGAACTCAGCAAGATAC+CGG | - | chr5.2:34511856-34511875 | None:intergenic | 40.0% | |
| TGATTACTCTTGCGGTGATT+AGG | - | chr5.2:34512606-34512625 | None:intergenic | 40.0% | |
| TGATTAGGGACAAGTCAACT+TGG | - | chr5.2:34512591-34512610 | None:intergenic | 40.0% | |
| TTGAACTAACTGTGGAAGAG+AGG | + | chr5.2:34510878-34510897 | MS.gene066779:CDS | 40.0% | |
| TTGGCATTCCATATCCTAGT+GGG | + | chr5.2:34512544-34512563 | MS.gene066779:intron | 40.0% | |
| ! | AAGTCAACTTGGTGGACAAT+GGG | - | chr5.2:34512580-34512599 | None:intergenic | 40.0% |
| ! | CAAAAGCTTGTTTGGCCAAA+TGG | - | chr5.2:34512232-34512251 | None:intergenic | 40.0% |
| ! | GTTCTTGCTGATGCATTGAT+TGG | + | chr5.2:34510282-34510301 | MS.gene066779:intron | 40.0% |
| ! | TCAAATCCTTTCCGACTTGT+TGG | + | chr5.2:34511193-34511212 | MS.gene066779:intron | 40.0% |
| ! | TTTTTGACAAGGTTGGGGTA+AGG | - | chr5.2:34512645-34512664 | None:intergenic | 40.0% |
| AAGATCAGTGTTTGCAGTGG+CGG | - | chr5.2:34512037-34512056 | None:intergenic | 45.0% | |
| AGTTGAGTGCAAGTCCAAGA+CGG | - | chr5.2:34512077-34512096 | None:intergenic | 45.0% | |
| CATTTGTCCCCACTAGGATA+TGG | - | chr5.2:34512555-34512574 | None:intergenic | 45.0% | |
| CGAGTGGATGATTACTCTTG+CGG | - | chr5.2:34512614-34512633 | None:intergenic | 45.0% | |
| CTTGAGTGAAGAGTCGTACA+AGG | + | chr5.2:34512277-34512296 | MS.gene066779:CDS | 45.0% | |
| CTTGTACGACTCTTCACTCA+AGG | - | chr5.2:34512279-34512298 | None:intergenic | 45.0% | |
| GACTGACCAAGAGAGAAAAG+AGG | + | chr5.2:34511874-34511893 | MS.gene066779:CDS | 45.0% | |
| GAGAGAGACCCAAGTTTACT+TGG | + | chr5.2:34509991-34510010 | MS.gene066779:CDS | 45.0% | |
| GAGGAACTCTCCAAAATCTG+TGG | + | chr5.2:34511045-34511064 | MS.gene066779:CDS | 45.0% | |
| GAGTTACTGCCAAAAGGTTG+AGG | + | chr5.2:34511023-34511042 | MS.gene066779:CDS | 45.0% | |
| GCAGGAAAGGGGATTATTTC+CGG | + | chr5.2:34511834-34511853 | MS.gene066779:intron | 45.0% | |
| GGGTAAGGATACAAATCGAG+TGG | - | chr5.2:34512630-34512649 | None:intergenic | 45.0% | |
| GTTGGCATTCCATATCCTAG+TGG | + | chr5.2:34512543-34512562 | MS.gene066779:intron | 45.0% | |
| TATACATACCTCAGGCTCAG+CGG | - | chr5.2:34512903-34512922 | None:intergenic | 45.0% | |
| TCAACACATCCAATCCGTCT+TGG | + | chr5.2:34512060-34512079 | MS.gene066779:CDS | 45.0% | |
| TGGAAGATCAGTGTTTGCAG+TGG | - | chr5.2:34512040-34512059 | None:intergenic | 45.0% | |
| TGGCATTCCATATCCTAGTG+GGG | + | chr5.2:34512545-34512564 | MS.gene066779:intron | 45.0% | |
| TTACTGCCAAAAGGTTGAGG+AGG | + | chr5.2:34511026-34511045 | MS.gene066779:CDS | 45.0% | |
| TTAGGGACAAGTCAACTTGG+TGG | - | chr5.2:34512588-34512607 | None:intergenic | 45.0% | |
| ! | AGAGTTCCTCCTCAACCTTT+TGG | - | chr5.2:34511035-34511054 | None:intergenic | 45.0% |
| ! | CAAGTCAACTTGGTGGACAA+TGG | - | chr5.2:34512581-34512600 | None:intergenic | 45.0% |
| ! | CGCCTCATCAAAAGCTTGTT+TGG | - | chr5.2:34512240-34512259 | None:intergenic | 45.0% |
| ! | GAAAACATTAGCTTCTGCCG+AGG | - | chr5.2:34511115-34511134 | None:intergenic | 45.0% |
| ! | GGCCAAACAAGCTTTTGATG+AGG | + | chr5.2:34512235-34512254 | MS.gene066779:CDS | 45.0% |
| ! | TTCAGCTTGTTCGGAAAGCT+TGG | - | chr5.2:34510017-34510036 | None:intergenic | 45.0% |
| !! | AGACGGATTGGATGTGTTGA+TGG | - | chr5.2:34512060-34512079 | None:intergenic | 45.0% |
| !! | TTTCTGGCTCACACGTACTT+TGG | + | chr5.2:34511776-34511795 | MS.gene066779:intron | 45.0% |
| !!! | TAATTTTGTTATTTTTTAAT+GGG | + | chr5.2:34510057-34510076 | MS.gene066779:intron | 5.0% |
| !!! | TTAATTTTGTTATTTTTTAA+TGG | + | chr5.2:34510056-34510075 | MS.gene066779:intron | 5.0% |
| !!! | TTATTTTATTTTAATTTTGA+AGG | + | chr5.2:34510257-34510276 | MS.gene066779:intron | 5.0% |
| AACTTACAGGGCCTGCCATT+TGG | + | chr5.2:34512214-34512233 | MS.gene066779:intron | 50.0% | |
| AATCAGAGGTCCAGAGAGTC+AGG | - | chr5.2:34512337-34512356 | None:intergenic | 50.0% | |
| AGTGCAAGTCCAAGACGGAT+TGG | - | chr5.2:34512072-34512091 | None:intergenic | 50.0% | |
| ATACATACCTCAGGCTCAGC+GGG | - | chr5.2:34512902-34512921 | None:intergenic | 50.0% | |
| CTCCTCCTTCTGCTCAATTG+AGG | - | chr5.2:34510968-34510987 | None:intergenic | 50.0% | |
| GAGCAGAAGGAGGAGTCTAA+GGG | + | chr5.2:34510973-34510992 | MS.gene066779:CDS | 50.0% | |
| GCAGTCACTGAAAGGATACG+AGG | + | chr5.2:34511904-34511923 | MS.gene066779:CDS | 50.0% | |
| GGTCTCTCTCTCTTTCTCAG+CGG | - | chr5.2:34509981-34510000 | None:intergenic | 50.0% | |
| GTCCTCAATTGAGCAGAAGG+AGG | + | chr5.2:34510963-34510982 | MS.gene066779:CDS | 50.0% | |
| TATCCCTTACCTCCATCCTC+TGG | - | chr5.2:34512362-34512381 | None:intergenic | 50.0% | |
| TCCATCCTCTGGCAAATCAG+AGG | - | chr5.2:34512351-34512370 | None:intergenic | 50.0% | |
| TGAGAGACAACCTGACTCTC+TGG | + | chr5.2:34512324-34512343 | MS.gene066779:CDS | 50.0% | |
| TGAGCAGAAGGAGGAGTCTA+AGG | + | chr5.2:34510972-34510991 | MS.gene066779:CDS | 50.0% | |
| TGATGAGGCGATTGCAGAGT+TGG | + | chr5.2:34512250-34512269 | MS.gene066779:CDS | 50.0% | |
| TGATGGCCAACAAGTCGGAA+AGG | - | chr5.2:34511202-34511221 | None:intergenic | 50.0% | |
| TTGCCAGAGGATGGAGGTAA+GGG | + | chr5.2:34512356-34512375 | MS.gene066779:intron | 50.0% | |
| TTGGTGCACGAAGAGCTTCA+TGG | + | chr5.2:34510932-34510951 | MS.gene066779:CDS | 50.0% | |
| TTTGCCAGAGGATGGAGGTA+AGG | + | chr5.2:34512355-34512374 | MS.gene066779:intron | 50.0% | |
| ! | AACATTAGCTTCTGCCGAGG+TGG | - | chr5.2:34511112-34511131 | None:intergenic | 50.0% |
| ! | ACCTCTGATTTGCCAGAGGA+TGG | + | chr5.2:34512347-34512366 | MS.gene066779:CDS | 50.0% |
| ! | AGCTTGTTTGGCCAAATGGC+AGG | - | chr5.2:34512228-34512247 | None:intergenic | 50.0% |
| ! | CAGCAGCCTCTTTTCTCTCT+TGG | - | chr5.2:34511883-34511902 | None:intergenic | 50.0% |
| ! | TCTGATTTGCCAGAGGATGG+AGG | + | chr5.2:34512350-34512369 | MS.gene066779:CDS | 50.0% |
| GAAACGGGTGCTCATCTACC+AGG | - | chr5.2:34511380-34511399 | None:intergenic | 55.0% | |
| GAGAGGAACCTCCTCTCAGT+TGG | + | chr5.2:34510895-34510914 | MS.gene066779:CDS | 55.0% | |
| GCTGCTGAGCAGTCACTGAA+AGG | + | chr5.2:34511896-34511915 | MS.gene066779:CDS | 55.0% | |
| TGGAAGCAGGAACCAGATGC+TGG | - | chr5.2:34511092-34511111 | None:intergenic | 55.0% | |
| ! | CTGGACCTCTGATTTGCCAG+AGG | + | chr5.2:34512343-34512362 | MS.gene066779:CDS | 55.0% |
| ! | TCTGGTTCCTGCTTCCACCT+CGG | + | chr5.2:34511095-34511114 | MS.gene066779:CDS | 55.0% |
| !! | TGGGAGCATTTGTCCCCACT+AGG | - | chr5.2:34512561-34512580 | None:intergenic | 55.0% |
| ACGGGTGCTCATCTACCAGG+TGG | - | chr5.2:34511377-34511396 | None:intergenic | 60.0% | |
| ! | TACCTCAGGCTCAGCGGGTT+TGG | - | chr5.2:34512897-34512916 | None:intergenic | 60.0% |
| AGCCAAACCCGCTGAGCCTG+AGG | + | chr5.2:34512892-34512911 | MS.gene066779:CDS | 65.0% | |
| GCTTCTGCCGAGGTGGAAGC+AGG | - | chr5.2:34511105-34511124 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 34509974 | 34513147 | 34509974 | ID=MS.gene066779 |
| chr5.2 | mRNA | 34509974 | 34513147 | 34509974 | ID=MS.gene066779.t1;Parent=MS.gene066779 |
| chr5.2 | exon | 34509974 | 34510046 | 34509974 | ID=MS.gene066779.t1.exon1;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34509974 | 34510046 | 34509974 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| chr5.2 | exon | 34510839 | 34511145 | 34510839 | ID=MS.gene066779.t1.exon2;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34510839 | 34511145 | 34510839 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| chr5.2 | exon | 34511838 | 34511925 | 34511838 | ID=MS.gene066779.t1.exon3;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34511838 | 34511925 | 34511838 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| chr5.2 | exon | 34512027 | 34512136 | 34512027 | ID=MS.gene066779.t1.exon4;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34512027 | 34512136 | 34512027 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| chr5.2 | exon | 34512223 | 34512371 | 34512223 | ID=MS.gene066779.t1.exon5;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34512223 | 34512371 | 34512223 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| chr5.2 | exon | 34512867 | 34512913 | 34512867 | ID=MS.gene066779.t1.exon6;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34512867 | 34512913 | 34512867 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| chr5.2 | exon | 34513142 | 34513147 | 34513142 | ID=MS.gene066779.t1.exon7;Parent=MS.gene066779.t1 |
| chr5.2 | CDS | 34513142 | 34513147 | 34513142 | ID=cds.MS.gene066779.t1;Parent=MS.gene066779.t1 |
| Gene Sequence |
| Protein sequence |
