Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53188.t1 | XP_003614051.1 | 99.6 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 7.40E-137 | 496.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53188.t1 | Q9C5W6 | 86.1 | 251 | 35 | 0 | 3 | 253 | 6 | 256 | 1.3e-116 | 420.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53188.t1 | G7JWT4 | 99.6 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 5.4e-137 | 496.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050874 | MS.gene53188 | 0.847149 | 1.39E-59 | -1.69E-46 |
| MS.gene050875 | MS.gene53188 | 0.843883 | 1.07E-58 | -1.69E-46 |
| MS.gene051896 | MS.gene53188 | 0.817779 | 2.76E-52 | -1.69E-46 |
| MS.gene051914 | MS.gene53188 | 0.852814 | 3.61E-61 | -1.69E-46 |
| MS.gene052169 | MS.gene53188 | 0.840397 | 8.91E-58 | -1.69E-46 |
| MS.gene052209 | MS.gene53188 | 0.814356 | 1.61E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene53188 | 0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene053173 | MS.gene53188 | 0.820557 | 6.44E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene53188 | 0.813679 | 2.27E-51 | -1.69E-46 |
| MS.gene054593 | MS.gene53188 | 0.824718 | 6.94E-54 | -1.69E-46 |
| MS.gene054633 | MS.gene53188 | 0.857795 | 1.28E-62 | -1.69E-46 |
| MS.gene054662 | MS.gene53188 | 0.888387 | 6.18E-73 | -1.69E-46 |
| MS.gene055308 | MS.gene53188 | 0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene53188 | 0.803313 | 3.70E-49 | -1.69E-46 |
| MS.gene05640 | MS.gene53188 | 0.849954 | 2.32E-60 | -1.69E-46 |
| MS.gene05652 | MS.gene53188 | 0.863721 | 2.03E-64 | -1.69E-46 |
| MS.gene057367 | MS.gene53188 | 0.862424 | 5.12E-64 | -1.69E-46 |
| MS.gene057669 | MS.gene53188 | 0.835393 | 1.72E-56 | -1.69E-46 |
| MS.gene058128 | MS.gene53188 | 0.830759 | 2.45E-55 | -1.69E-46 |
| MS.gene058853 | MS.gene53188 | 0.824651 | 7.19E-54 | -1.69E-46 |
| MS.gene059553 | MS.gene53188 | 0.844197 | 8.77E-59 | -1.69E-46 |
| MS.gene059616 | MS.gene53188 | 0.859905 | 2.99E-63 | -1.69E-46 |
| MS.gene060291 | MS.gene53188 | 0.840945 | 6.40E-58 | -1.69E-46 |
| MS.gene06093 | MS.gene53188 | 0.869999 | 2.03E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010179 | MS.gene53188 | PPI |
| MS.gene64150 | MS.gene53188 | PPI |
| MS.gene48435 | MS.gene53188 | PPI |
| MS.gene055488 | MS.gene53188 | PPI |
| MS.gene020411 | MS.gene53188 | PPI |
| MS.gene013133 | MS.gene53188 | PPI |
| MS.gene043907 | MS.gene53188 | PPI |
| MS.gene028807 | MS.gene53188 | PPI |
| MS.gene050079 | MS.gene53188 | PPI |
| MS.gene035837 | MS.gene53188 | PPI |
| MS.gene013047 | MS.gene53188 | PPI |
| MS.gene31370 | MS.gene53188 | PPI |
| MS.gene043514 | MS.gene53188 | PPI |
| MS.gene54847 | MS.gene53188 | PPI |
| MS.gene052176 | MS.gene53188 | PPI |
| MS.gene38593 | MS.gene53188 | PPI |
| MS.gene010180 | MS.gene53188 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53188.t1 | MTR_5g044160 | 99.614 | 259 | 1 | 0 | 1 | 259 | 1 | 259 | 0.0 | 531 |
| MS.gene53188.t1 | MTR_4g083060 | 89.147 | 258 | 27 | 1 | 1 | 258 | 1 | 257 | 5.71e-174 | 481 |
| MS.gene53188.t1 | MTR_2g091225 | 75.502 | 249 | 60 | 1 | 1 | 249 | 1 | 248 | 1.69e-142 | 400 |
| MS.gene53188.t1 | MTR_8g086270 | 76.735 | 245 | 57 | 0 | 1 | 245 | 1 | 245 | 3.16e-141 | 397 |
| MS.gene53188.t1 | MTR_2g076960 | 73.790 | 248 | 65 | 0 | 2 | 249 | 3 | 250 | 1.40e-138 | 390 |
| MS.gene53188.t1 | MTR_2g015980 | 75.309 | 243 | 58 | 2 | 11 | 253 | 9 | 249 | 3.37e-135 | 382 |
| MS.gene53188.t1 | MTR_2g091225 | 76.000 | 225 | 53 | 1 | 25 | 249 | 2 | 225 | 2.74e-129 | 366 |
| MS.gene53188.t1 | MTR_3g099380 | 70.817 | 257 | 72 | 3 | 2 | 256 | 3 | 258 | 1.75e-127 | 362 |
| MS.gene53188.t1 | MTR_5g064580 | 68.627 | 255 | 75 | 2 | 2 | 254 | 3 | 254 | 6.30e-124 | 353 |
| MS.gene53188.t1 | MTR_3g100620 | 66.809 | 235 | 75 | 1 | 7 | 238 | 11 | 245 | 2.16e-113 | 326 |
| MS.gene53188.t1 | MTR_3g099380 | 68.657 | 201 | 61 | 2 | 2 | 200 | 3 | 203 | 3.25e-95 | 278 |
| MS.gene53188.t1 | MTR_0137s0020 | 52.542 | 236 | 102 | 5 | 7 | 237 | 11 | 241 | 4.81e-74 | 226 |
| MS.gene53188.t1 | MTR_3g014060 | 52.119 | 236 | 103 | 5 | 7 | 237 | 11 | 241 | 3.06e-73 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53188.t1 | AT1G26480 | 84.231 | 260 | 36 | 1 | 2 | 256 | 5 | 264 | 1.11e-162 | 451 |
| MS.gene53188.t1 | AT1G34760 | 79.835 | 243 | 48 | 1 | 4 | 246 | 2 | 243 | 1.06e-143 | 403 |
| MS.gene53188.t1 | AT1G34760 | 79.835 | 243 | 48 | 1 | 4 | 246 | 2 | 243 | 1.19e-143 | 403 |
| MS.gene53188.t1 | AT2G42590 | 74.219 | 256 | 65 | 1 | 1 | 255 | 1 | 256 | 6.91e-141 | 396 |
| MS.gene53188.t1 | AT2G42590 | 74.219 | 256 | 65 | 1 | 1 | 255 | 1 | 256 | 7.30e-141 | 397 |
| MS.gene53188.t1 | AT2G42590 | 73.725 | 255 | 67 | 0 | 1 | 255 | 1 | 255 | 1.60e-139 | 392 |
| MS.gene53188.t1 | AT1G22300 | 74.400 | 250 | 64 | 0 | 4 | 253 | 2 | 251 | 2.06e-135 | 382 |
| MS.gene53188.t1 | AT1G22300 | 74.400 | 250 | 64 | 0 | 4 | 253 | 2 | 251 | 3.61e-135 | 381 |
| MS.gene53188.t1 | AT1G22300 | 76.250 | 240 | 57 | 0 | 4 | 243 | 2 | 241 | 6.60e-134 | 378 |
| MS.gene53188.t1 | AT1G35160 | 72.619 | 252 | 67 | 2 | 7 | 256 | 11 | 262 | 2.17e-127 | 362 |
| MS.gene53188.t1 | AT3G02520 | 71.705 | 258 | 65 | 3 | 7 | 256 | 5 | 262 | 3.07e-127 | 362 |
| MS.gene53188.t1 | AT3G02520 | 71.705 | 258 | 65 | 3 | 7 | 256 | 5 | 262 | 3.07e-127 | 362 |
| MS.gene53188.t1 | AT5G38480 | 71.429 | 252 | 70 | 2 | 7 | 256 | 4 | 255 | 5.13e-127 | 361 |
| MS.gene53188.t1 | AT1G78300 | 69.804 | 255 | 75 | 2 | 7 | 259 | 5 | 259 | 1.49e-125 | 357 |
| MS.gene53188.t1 | AT5G38480 | 72.800 | 250 | 63 | 4 | 7 | 254 | 4 | 250 | 2.47e-125 | 356 |
| MS.gene53188.t1 | AT5G38480 | 72.800 | 250 | 63 | 4 | 7 | 254 | 4 | 250 | 2.47e-125 | 356 |
| MS.gene53188.t1 | AT4G09000 | 71.138 | 246 | 69 | 2 | 2 | 245 | 5 | 250 | 4.37e-124 | 354 |
| MS.gene53188.t1 | AT1G35160 | 75.214 | 234 | 56 | 2 | 7 | 238 | 11 | 244 | 1.77e-123 | 353 |
| MS.gene53188.t1 | AT4G09000 | 72.803 | 239 | 63 | 2 | 2 | 238 | 5 | 243 | 1.28e-121 | 349 |
| MS.gene53188.t1 | AT5G16050 | 66.288 | 264 | 79 | 2 | 1 | 254 | 1 | 264 | 3.53e-120 | 344 |
| MS.gene53188.t1 | AT5G16050 | 66.288 | 264 | 79 | 2 | 1 | 254 | 1 | 264 | 3.53e-120 | 344 |
| MS.gene53188.t1 | AT5G65430 | 66.397 | 247 | 80 | 1 | 1 | 244 | 1 | 247 | 1.80e-115 | 331 |
| MS.gene53188.t1 | AT5G65430 | 66.803 | 244 | 78 | 1 | 1 | 241 | 1 | 244 | 1.94e-115 | 331 |
| MS.gene53188.t1 | AT5G65430 | 67.220 | 241 | 76 | 1 | 1 | 238 | 1 | 241 | 4.07e-114 | 328 |
| MS.gene53188.t1 | AT5G10450 | 65.021 | 243 | 82 | 1 | 1 | 240 | 1 | 243 | 2.56e-113 | 326 |
| MS.gene53188.t1 | AT5G10450 | 64.754 | 244 | 83 | 1 | 1 | 241 | 1 | 244 | 3.43e-113 | 325 |
| MS.gene53188.t1 | AT5G10450 | 65.145 | 241 | 81 | 1 | 1 | 238 | 1 | 241 | 1.93e-112 | 324 |
| MS.gene53188.t1 | AT5G10450 | 65.145 | 241 | 81 | 1 | 1 | 238 | 1 | 241 | 4.83e-112 | 323 |
| MS.gene53188.t1 | AT1G78220 | 51.709 | 234 | 112 | 1 | 4 | 236 | 2 | 235 | 3.45e-83 | 249 |
| MS.gene53188.t1 | AT1G22290 | 49.537 | 216 | 85 | 5 | 4 | 214 | 2 | 198 | 5.65e-60 | 189 |
| MS.gene53188.t1 | AT1G22290 | 49.296 | 213 | 84 | 5 | 4 | 211 | 2 | 195 | 1.79e-59 | 187 |
| MS.gene53188.t1 | AT2G10450 | 59.574 | 47 | 19 | 0 | 204 | 250 | 16 | 62 | 2.20e-12 | 61.6 |
Find 59 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATGTCACCACAGATTT+TGG | 0.117398 | 5.4:-33503042 | None:intergenic |
| GAACCGATTGCTTACCTTTC+AGG | 0.129498 | 5.4:-33504145 | None:intergenic |
| TGAGCAGAAGGAGGAGTCTA+AGG | 0.249783 | 5.4:+33502959 | MS.gene53188:CDS |
| GCAGGAAAGGTGATTATTTC+CGG | 0.278329 | 5.4:+33503850 | MS.gene53188:intron |
| TGAGAGACAACCTGACTCTT+TGG | 0.293543 | 5.4:+33504338 | MS.gene53188:CDS |
| CGCCTCATCAAAAGCTTGTT+TGG | 0.319773 | 5.4:-33504251 | None:intergenic |
| TACCTCAGGCTCAGCGGGTT+TGG | 0.338393 | 5.4:-33504907 | None:intergenic |
| AGAGTTCCTCCTCAACCTTT+TGG | 0.345006 | 5.4:-33503019 | None:intergenic |
| CAAAAGCTTGTTTGGCCAAA+TGG | 0.349323 | 5.4:-33504243 | None:intergenic |
| AACTTACAGGGCCTGCCATT+TGG | 0.370260 | 5.4:+33504228 | MS.gene53188:intron |
| TTCATATCTTTCAGCTTGTT+CGG | 0.370539 | 5.4:-33501866 | None:intergenic |
| GAGAGAGACCCAAGTTTACT+TGG | 0.378465 | 5.4:+33501834 | MS.gene53188:CDS |
| GACAATTATTGACCAGCATC+TGG | 0.387445 | 5.4:+33503064 | MS.gene53188:CDS |
| AAAGCTTGGCCAAGTAAACT+TGG | 0.423724 | 5.4:-33501843 | None:intergenic |
| TTCAGCTTGTTCGGAAAGCT+TGG | 0.436972 | 5.4:-33501857 | None:intergenic |
| AGCTTGTTTGGCCAAATGGC+AGG | 0.464126 | 5.4:-33504239 | None:intergenic |
| TGATGAGGCGATTGCAGAGT+TGG | 0.469932 | 5.4:+33504264 | MS.gene53188:CDS |
| AGACGGATTGGATGTGTTGA+TGG | 0.480349 | 5.4:-33504073 | None:intergenic |
| ACCTCTGATTTGCCAGAGGA+TGG | 0.485005 | 5.4:+33504361 | MS.gene53188:CDS |
| GCTTCTGCCGAGGTGGAAGC+AGG | 0.494681 | 5.4:-33503089 | None:intergenic |
| AATCAGAGGTCCAAAGAGTC+AGG | 0.501037 | 5.4:-33504348 | None:intergenic |
| ACACATACCTCAGGCTCAGC+GGG | 0.513323 | 5.4:-33504912 | None:intergenic |
| GATCAAGAGTTACTGCCAAA+AGG | 0.518570 | 5.4:+33503004 | MS.gene53188:CDS |
| GAACAAGCTGAAAGATATGA+AGG | 0.522838 | 5.4:+33501868 | MS.gene53188:CDS |
| GAGAGGAACCTCCTCTCTGT+TGG | 0.523318 | 5.4:+33502882 | MS.gene53188:CDS |
| TCTTGAACTCAGCAAGATAC+CGG | 0.525675 | 5.4:-33503869 | None:intergenic |
| TTGGTGCACGAAGAGCTTCA+TGG | 0.527662 | 5.4:+33502919 | MS.gene53188:CDS |
| GAGTTACTGCCAAAAGGTTG+AGG | 0.532495 | 5.4:+33503010 | MS.gene53188:CDS |
| TATCCCTTACCTCCATCCTC+TGG | 0.533069 | 5.4:-33504373 | None:intergenic |
| TATGTCTTCAATTGAGCAGA+AGG | 0.534226 | 5.4:+33502947 | MS.gene53188:CDS |
| TGGAAGCAGGAACCAGATGC+TGG | 0.540094 | 5.4:-33503076 | None:intergenic |
| TCAACACATCCAATCCGTCT+TGG | 0.541520 | 5.4:+33504076 | MS.gene53188:CDS |
| TTGGACCTCTGATTTGCCAG+AGG | 0.548600 | 5.4:+33504357 | MS.gene53188:CDS |
| AGTGCAAGTCCAAGACGGAT+TGG | 0.548630 | 5.4:-33504085 | None:intergenic |
| AAGATCAGTGTTTGCAGTGG+CGG | 0.557206 | 5.4:-33504050 | None:intergenic |
| GACTGACCAAGAAAGAAAAG+AGG | 0.574308 | 5.4:+33503890 | MS.gene53188:CDS |
| AACATTAGCTTCTGCCGAGG+TGG | 0.575120 | 5.4:-33503096 | None:intergenic |
| CTTGTATGACTCTTCACTCA+AGG | 0.578019 | 5.4:-33504290 | None:intergenic |
| AGCCAAACCCGCTGAGCCTG+AGG | 0.586083 | 5.4:+33504905 | MS.gene53188:CDS |
| TTGAACTAACTGTGGAAGAG+AGG | 0.589747 | 5.4:+33502865 | MS.gene53188:CDS |
| GAGCAGAAGGAGGAGTCTAA+GGG | 0.589752 | 5.4:+33502960 | MS.gene53188:CDS |
| CTTGAGTGAAGAGTCATACA+AGG | 0.594010 | 5.4:+33504291 | MS.gene53188:CDS |
| GGTTGAATGTATGAAGAAAG+TGG | 0.595766 | 5.4:+33502830 | MS.gene53188:CDS |
| GCTGCTGAGCAGTCACTGAA+AGG | 0.600437 | 5.4:+33503912 | MS.gene53188:CDS |
| AAGCTTGGCCAAGTAAACTT+GGG | 0.611139 | 5.4:-33501842 | None:intergenic |
| GTCTTCAATTGAGCAGAAGG+AGG | 0.614518 | 5.4:+33502950 | MS.gene53188:CDS |
| TCCATCCTCTGGCAAATCAG+AGG | 0.621846 | 5.4:-33504362 | None:intergenic |
| AGATTATGAACTCTCCTGAA+AGG | 0.626121 | 5.4:+33504131 | MS.gene53188:CDS |
| GAGGAACTCTCCAAAATCTG+TGG | 0.639940 | 5.4:+33503032 | MS.gene53188:CDS |
| TCTGATTTGCCAGAGGATGG+AGG | 0.645454 | 5.4:+33504364 | MS.gene53188:CDS |
| ACTTGATGTTGAACTAACTG+TGG | 0.647498 | 5.4:+33502857 | MS.gene53188:CDS |
| TTACTGCCAAAAGGTTGAGG+AGG | 0.652188 | 5.4:+33503013 | MS.gene53188:CDS |
| AGTTGAGTGCAAGTCCAAGA+CGG | 0.652366 | 5.4:-33504090 | None:intergenic |
| TACACATACCTCAGGCTCAG+CGG | 0.668404 | 5.4:-33504913 | None:intergenic |
| GGTCTCTCTCTCTTTCTCAG+CGG | 0.674609 | 5.4:-33501821 | None:intergenic |
| GAAAACATTAGCTTCTGCCG+AGG | 0.676043 | 5.4:-33503099 | None:intergenic |
| TCTGGTTCCTGCTTCCACCT+CGG | 0.676873 | 5.4:+33503082 | MS.gene53188:CDS |
| TGGAAGATCAGTGTTTGCAG+TGG | 0.713574 | 5.4:-33504053 | None:intergenic |
| GCAGTCACTGAAAGGATACG+AGG | 0.737880 | 5.4:+33503920 | MS.gene53188:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGCTTTTAAAAATTA+GGG | + | chr5.4:33504452-33504471 | MS.gene53188:intron | 10.0% |
| !! | AAAGTATAGGTATATATTAT+TGG | + | chr5.4:33504529-33504548 | MS.gene53188:intron | 15.0% |
| !! | AAGTATAGGTATATATTATT+GGG | + | chr5.4:33504530-33504549 | MS.gene53188:intron | 15.0% |
| !! | AATATGTTATCTAAAAATGT+TGG | + | chr5.4:33502282-33502301 | MS.gene53188:intron | 15.0% |
| !! | TGTACATTCATAATAAATTA+TGG | + | chr5.4:33502331-33502350 | MS.gene53188:intron | 15.0% |
| !!! | AAAGATTTGATTTTTTGATT+TGG | + | chr5.4:33502012-33502031 | MS.gene53188:intron | 15.0% |
| !!! | AAGATTTGATTTTTTGATTT+GGG | + | chr5.4:33502013-33502032 | MS.gene53188:intron | 15.0% |
| !!! | AATTCTTTTAAGTGAAAAAA+AGG | + | chr5.4:33505040-33505059 | MS.gene53188:intron | 15.0% |
| !!! | AATTTTTAAAAGCAAAAAAC+TGG | - | chr5.4:33504451-33504470 | None:intergenic | 15.0% |
| !!! | ATAATAATGTCAAATTTTGA+GGG | - | chr5.4:33505118-33505137 | None:intergenic | 15.0% |
| !!! | ATTCTTTTAAGTGAAAAAAA+GGG | + | chr5.4:33505041-33505060 | MS.gene53188:intron | 15.0% |
| !!! | GTTTTTTGCTTTTAAAAATT+AGG | + | chr5.4:33504451-33504470 | MS.gene53188:intron | 15.0% |
| !!! | TTTTATTTTAATTTTGAAGG+TGG | + | chr5.4:33502103-33502122 | MS.gene53188:intron | 15.0% |
| !!! | TTTTTTCTGATTTATGATTT+CGG | + | chr5.4:33502627-33502646 | MS.gene53188:intron | 15.0% |
| !! | ATAATAAATTATGGATGTGT+TGG | + | chr5.4:33502340-33502359 | MS.gene53188:intron | 20.0% |
| !! | ATATGCATTATGCAATAATT+AGG | - | chr5.4:33502722-33502741 | None:intergenic | 20.0% |
| !! | ATCTTCTAAATTGAGAAATT+TGG | + | chr5.4:33502256-33502275 | MS.gene53188:intron | 20.0% |
| !! | ATTATGATGTGAATTATGTT+TGG | + | chr5.4:33502456-33502475 | MS.gene53188:intron | 20.0% |
| !! | CTACTATAAATCTATAACTA+TGG | - | chr5.4:33504994-33505013 | None:intergenic | 20.0% |
| !!! | ATTGAATACAAATTTTCAGA+AGG | - | chr5.4:33502800-33502819 | None:intergenic | 20.0% |
| !!! | CATAATAATGTCAAATTTTG+AGG | - | chr5.4:33505119-33505138 | None:intergenic | 20.0% |
| !!! | CTTTGAATTCTAGTTAATTA+TGG | + | chr5.4:33503505-33503524 | MS.gene53188:intron | 20.0% |
| !!! | TGTTATTTTTTAATGGGTTT+GGG | + | chr5.4:33501906-33501925 | MS.gene53188:intron | 20.0% |
| !!! | TTGAATACAAATTTTCAGAA+GGG | - | chr5.4:33502799-33502818 | None:intergenic | 20.0% |
| !!! | TTGTTATTTTTTAATGGGTT+TGG | + | chr5.4:33501905-33501924 | MS.gene53188:intron | 20.0% |
| !!! | TTTGGTTTATAATACACTTA+CGG | + | chr5.4:33504813-33504832 | MS.gene53188:intron | 20.0% |
| ! | AAAAACAGGAGTTAATAAAC+TGG | - | chr5.4:33502526-33502545 | None:intergenic | 25.0% |
| ! | AAGAGATTTCATATCACATA+AGG | - | chr5.4:33503774-33503793 | None:intergenic | 25.0% |
| ! | AGAATGAGATACTACATTAT+AGG | + | chr5.4:33503533-33503552 | MS.gene53188:intron | 25.0% |
| ! | AGTTAGGAGTTTAATAAACA+AGG | - | chr5.4:33503615-33503634 | None:intergenic | 25.0% |
| ! | ATAGGTATATATTATTGGGT+AGG | + | chr5.4:33504534-33504553 | MS.gene53188:intron | 25.0% |
| ! | ATTATAAACAGTTAGCAACA+TGG | - | chr5.4:33502757-33502776 | None:intergenic | 25.0% |
| ! | ATTATGCAATAATTAGGTTC+AGG | - | chr5.4:33502716-33502735 | None:intergenic | 25.0% |
| ! | ATTGAACCATTCACTTTAAA+AGG | - | chr5.4:33502413-33502432 | None:intergenic | 25.0% |
| ! | CATTATAGGTTATAGATTAC+AGG | + | chr5.4:33503547-33503566 | MS.gene53188:intron | 25.0% |
| ! | GAAGAAAGAGATAAATCTAA+TGG | - | chr5.4:33503205-33503224 | None:intergenic | 25.0% |
| ! | GCTTAATTACACAATTAACT+AGG | - | chr5.4:33504785-33504804 | None:intergenic | 25.0% |
| ! | GGTAGAAATTAATGAATGTT+TGG | - | chr5.4:33505097-33505116 | None:intergenic | 25.0% |
| ! | GTTAGGAGTTTAATAAACAA+GGG | - | chr5.4:33503614-33503633 | None:intergenic | 25.0% |
| ! | TATATTCCACTCAAGTTATA+GGG | + | chr5.4:33503454-33503473 | MS.gene53188:intron | 25.0% |
| ! | TTATATTCCACTCAAGTTAT+AGG | + | chr5.4:33503453-33503472 | MS.gene53188:intron | 25.0% |
| ! | TTGTATTCAATATGCAGAAA+TGG | + | chr5.4:33502809-33502828 | MS.gene53188:intron | 25.0% |
| !! | AGATCAATCATTTTCTAGAT+TGG | + | chr5.4:33502053-33502072 | MS.gene53188:intron | 25.0% |
| !! | GTTTCTATCTTTTGTCTAAA+TGG | + | chr5.4:33504196-33504215 | MS.gene53188:intron | 25.0% |
| !!! | ACTTTACCTTTTAAAGTGAA+TGG | + | chr5.4:33502404-33502423 | MS.gene53188:intron | 25.0% |
| !!! | CTGTTTTTTTGTTGTGATTT+GGG | + | chr5.4:33501966-33501985 | MS.gene53188:intron | 25.0% |
| !!! | GTAATTAAGCTCTTGTTATT+TGG | + | chr5.4:33504795-33504814 | MS.gene53188:intron | 25.0% |
| !!! | TCACAACTGTTTTGATTATT+AGG | + | chr5.4:33504021-33504040 | MS.gene53188:intron | 25.0% |
| !!! | TCTGTTTTTTTGTTGTGATT+TGG | + | chr5.4:33501965-33501984 | MS.gene53188:intron | 25.0% |
| !!! | TTTGATTTGATGCTTAGATT+AGG | + | chr5.4:33502226-33502245 | MS.gene53188:intron | 25.0% |
| AAACATAGAATCTGTATGAC+TGG | + | chr5.4:33503295-33503314 | MS.gene53188:intron | 30.0% | |
| AAAGGTTAATACTCTCTTAC+AGG | + | chr5.4:33504858-33504877 | MS.gene53188:intron | 30.0% | |
| AAATGAAGCATAAGGAAATC+AGG | - | chr5.4:33503827-33503846 | None:intergenic | 30.0% | |
| AATGAAGCATAAGGAAATCA+GGG | - | chr5.4:33503826-33503845 | None:intergenic | 30.0% | |
| ACCAAGTGAGAAATAAAAAC+AGG | - | chr5.4:33502540-33502559 | None:intergenic | 30.0% | |
| ACCTATACTTTCAATGTGTT+TGG | - | chr5.4:33504520-33504539 | None:intergenic | 30.0% | |
| AGTTAATAAACTGGCCAATT+TGG | - | chr5.4:33502517-33502536 | None:intergenic | 30.0% | |
| ATCAAACAGTGAAGAAATCA+TGG | + | chr5.4:33503638-33503657 | MS.gene53188:intron | 30.0% | |
| ATGGTAAGGACTACAAAATA+TGG | + | chr5.4:33503657-33503676 | MS.gene53188:intron | 30.0% | |
| ATTAAAAATCTCGCATCTCA+GGG | - | chr5.4:33504485-33504504 | None:intergenic | 30.0% | |
| ATTTATCTCTTTCTTCGTTG+TGG | + | chr5.4:33503209-33503228 | MS.gene53188:intron | 30.0% | |
| GTATATATTATTGGGTAGGT+TGG | + | chr5.4:33504538-33504557 | MS.gene53188:intron | 30.0% | |
| GTTAATAAACTGGCCAATTT+GGG | - | chr5.4:33502516-33502535 | None:intergenic | 30.0% | |
| GTTGGATATAAAAACGTCAT+TGG | + | chr5.4:33502900-33502919 | MS.gene53188:CDS | 30.0% | |
| TATAGGGTTTCAGATAAAGA+TGG | + | chr5.4:33503470-33503489 | MS.gene53188:intron | 30.0% | |
| TCCAATCACTCATTCATAAT+AGG | - | chr5.4:33503424-33503443 | None:intergenic | 30.0% | |
| TCCTATTATGAATGAGTGAT+TGG | + | chr5.4:33503420-33503439 | MS.gene53188:intron | 30.0% | |
| TGTGATATGAAATCTCTTAC+TGG | + | chr5.4:33503776-33503795 | MS.gene53188:intron | 30.0% | |
| TTTGTATTTCAGCACTAAAG+TGG | + | chr5.4:33503943-33503962 | MS.gene53188:intron | 30.0% | |
| ! | ACAATATGACTAAGGTTTTC+TGG | - | chr5.4:33504731-33504750 | None:intergenic | 30.0% |
| ! | ACCAAACACATTGAAAGTAT+AGG | + | chr5.4:33504516-33504535 | MS.gene53188:intron | 30.0% |
| ! | TCTATCTTTTGTCTAAATGG+TGG | + | chr5.4:33504199-33504218 | MS.gene53188:intron | 30.0% |
| ! | TTATTGATGTGTCATTGTGT+TGG | + | chr5.4:33502187-33502206 | MS.gene53188:intron | 30.0% |
| ! | TTCACTGTTTGATTCTAGTT+AGG | - | chr5.4:33503631-33503650 | None:intergenic | 30.0% |
| ! | TTCATATCTTTCAGCTTGTT+CGG | - | chr5.4:33501869-33501888 | None:intergenic | 30.0% |
| ! | TTCTGGAAACAATATGACTA+AGG | - | chr5.4:33504739-33504758 | None:intergenic | 30.0% |
| !!! | CCTAATTTTTTGACAAGGTT+GGG | - | chr5.4:33504664-33504683 | None:intergenic | 30.0% |
| !!! | CTAATTTTTTGACAAGGTTG+GGG | - | chr5.4:33504663-33504682 | None:intergenic | 30.0% |
| !!! | CTCATCCTAATTTTTTGACA+AGG | - | chr5.4:33504669-33504688 | None:intergenic | 30.0% |
| !!! | TCCTAATTTTTTGACAAGGT+TGG | - | chr5.4:33504665-33504684 | None:intergenic | 30.0% |
| !!! | TCCTGTTTTTATTTCTCACT+TGG | + | chr5.4:33502536-33502555 | MS.gene53188:intron | 30.0% |
| AAATCTAATGGCCAACAAGT+CGG | - | chr5.4:33503193-33503212 | None:intergenic | 35.0% | |
| AATTTCAACGACGCAATCAA+AGG | - | chr5.4:33502374-33502393 | None:intergenic | 35.0% | |
| ACAGTGAAGAAATCATGGTA+AGG | + | chr5.4:33503643-33503662 | MS.gene53188:intron | 35.0% | |
| ACTTGATGTTGAACTAACTG+TGG | + | chr5.4:33502857-33502876 | MS.gene53188:CDS | 35.0% | |
| AGATTAATCTTCCCCTGATA+AGG | - | chr5.4:33502584-33502603 | None:intergenic | 35.0% | |
| AGATTATGAACTCTCCTGAA+AGG | + | chr5.4:33504131-33504150 | MS.gene53188:CDS | 35.0% | |
| AGGTGGATAACAAATATGCA+AGG | - | chr5.4:33503353-33503372 | None:intergenic | 35.0% | |
| ATTTCAACGACGCAATCAAA+GGG | - | chr5.4:33502373-33502392 | None:intergenic | 35.0% | |
| CCCAACCTTGTCAAAAAATT+AGG | + | chr5.4:33504661-33504680 | MS.gene53188:intron | 35.0% | |
| GAACAAGCTGAAAGATATGA+AGG | + | chr5.4:33501868-33501887 | MS.gene53188:CDS | 35.0% | |
| GATTAAAAATCTCGCATCTC+AGG | - | chr5.4:33504486-33504505 | None:intergenic | 35.0% | |
| GATTACTCTTGTGGTGATTA+GGG | - | chr5.4:33504618-33504637 | None:intergenic | 35.0% | |
| GGACTACAAAATATGGAAAC+TGG | + | chr5.4:33503664-33503683 | MS.gene53188:intron | 35.0% | |
| GGTTGAATGTATGAAGAAAG+TGG | + | chr5.4:33502830-33502849 | MS.gene53188:CDS | 35.0% | |
| GTAATGTCATAGACCCAAAT+TGG | + | chr5.4:33502500-33502519 | MS.gene53188:intron | 35.0% | |
| TATGTCTTCAATTGAGCAGA+AGG | + | chr5.4:33502947-33502966 | MS.gene53188:CDS | 35.0% | |
| TCATGAGAAGAAACTCATTC+TGG | - | chr5.4:33504756-33504775 | None:intergenic | 35.0% | |
| TGATGCTTAGATTAGGAAAC+TGG | + | chr5.4:33502233-33502252 | MS.gene53188:intron | 35.0% | |
| TGATTACTCTTGTGGTGATT+AGG | - | chr5.4:33504619-33504638 | None:intergenic | 35.0% | |
| TGGATAACTTATCCAATAGC+AGG | - | chr5.4:33504711-33504730 | None:intergenic | 35.0% | |
| TTAATACTCTCTTACAGGTG+AGG | + | chr5.4:33504863-33504882 | MS.gene53188:intron | 35.0% | |
| TTGGGTCTATGACATTACTT+TGG | - | chr5.4:33502498-33502517 | None:intergenic | 35.0% | |
| ! | ATGGTGGTGATAAAACTTAC+AGG | + | chr5.4:33504215-33504234 | MS.gene53188:intron | 35.0% |
| ! | CGTTTTTATATCCAACAGAG+AGG | - | chr5.4:33502896-33502915 | None:intergenic | 35.0% |
| ! | GAGATGCGAGATTTTTAATC+TGG | + | chr5.4:33504486-33504505 | MS.gene53188:intron | 35.0% |
| ! | TGGTGGTGATAAAACTTACA+GGG | + | chr5.4:33504216-33504235 | MS.gene53188:intron | 35.0% |
| ! | TTTTATATCCAACAGAGAGG+AGG | - | chr5.4:33502893-33502912 | None:intergenic | 35.0% |
| !! | GGTATGTGTAAGATTGGTTT+CGG | + | chr5.4:33504926-33504945 | MS.gene53188:intron | 35.0% |
| !! | TTGCATATTTGTTATCCACC+TGG | + | chr5.4:33503352-33503371 | MS.gene53188:intron | 35.0% |
| !! | TTTGGCTTCTTCAGCTTTTA+TGG | - | chr5.4:33504892-33504911 | None:intergenic | 35.0% |
| AAAGAAACTGTGCCTGCTAT+TGG | + | chr5.4:33504696-33504715 | MS.gene53188:intron | 40.0% | |
| AAAGCTTGGCCAAGTAAACT+TGG | - | chr5.4:33501846-33501865 | None:intergenic | 40.0% | |
| AAGCTTGGCCAAGTAAACTT+GGG | - | chr5.4:33501845-33501864 | None:intergenic | 40.0% | |
| ACCAATCTTACACATACCTC+AGG | - | chr5.4:33504924-33504943 | None:intergenic | 40.0% | |
| CAAAAAACTGGAGAGCTTGA+AGG | - | chr5.4:33504439-33504458 | None:intergenic | 40.0% | |
| CATAGAATCTGTATGACTGG+TGG | + | chr5.4:33503298-33503317 | MS.gene53188:intron | 40.0% | |
| CCAGGACTTAATCATGAAAC+GGG | - | chr5.4:33503388-33503407 | None:intergenic | 40.0% | |
| CCTGCATCAAATGAAGCATA+AGG | - | chr5.4:33503835-33503854 | None:intergenic | 40.0% | |
| CCTTATGCTTCATTTGATGC+AGG | + | chr5.4:33503832-33503851 | MS.gene53188:intron | 40.0% | |
| CTCCAATTTGTGCCTTATCA+GGG | + | chr5.4:33502569-33502588 | MS.gene53188:intron | 40.0% | |
| CTGAAACCCTATAACTTGAG+TGG | - | chr5.4:33503463-33503482 | None:intergenic | 40.0% | |
| CTTGAGTGAAGAGTCATACA+AGG | + | chr5.4:33504291-33504310 | MS.gene53188:CDS | 40.0% | |
| CTTGTATGACTCTTCACTCA+AGG | - | chr5.4:33504293-33504312 | None:intergenic | 40.0% | |
| GACAATTATTGACCAGCATC+TGG | + | chr5.4:33503064-33503083 | MS.gene53188:CDS | 40.0% | |
| GACTGACCAAGAAAGAAAAG+AGG | + | chr5.4:33503890-33503909 | MS.gene53188:CDS | 40.0% | |
| GATCAAGAGTTACTGCCAAA+AGG | + | chr5.4:33503004-33503023 | MS.gene53188:CDS | 40.0% | |
| GCAGGAAAGGTGATTATTTC+CGG | + | chr5.4:33503850-33503869 | MS.gene53188:intron | 40.0% | |
| GCCAGGACTTAATCATGAAA+CGG | - | chr5.4:33503389-33503408 | None:intergenic | 40.0% | |
| TCCAATTTGTGCCTTATCAG+GGG | + | chr5.4:33502570-33502589 | MS.gene53188:intron | 40.0% | |
| TCTCCAATTTGTGCCTTATC+AGG | + | chr5.4:33502568-33502587 | MS.gene53188:intron | 40.0% | |
| TCTCCTGAAAGGTAAGCAAT+CGG | + | chr5.4:33504142-33504161 | MS.gene53188:intron | 40.0% | |
| TCTTGAACTCAGCAAGATAC+CGG | - | chr5.4:33503872-33503891 | None:intergenic | 40.0% | |
| TGCTTCATTTGATGCAGGAA+AGG | + | chr5.4:33503837-33503856 | MS.gene53188:intron | 40.0% | |
| TTGAACTAACTGTGGAAGAG+AGG | + | chr5.4:33502865-33502884 | MS.gene53188:CDS | 40.0% | |
| TTGGCATTCCATATCCTAGT+GGG | + | chr5.4:33504557-33504576 | MS.gene53188:intron | 40.0% | |
| ! | ATCGGTTCTCATACTTAGCA+TGG | + | chr5.4:33504160-33504179 | MS.gene53188:intron | 40.0% |
| ! | CAAAAGCTTGTTTGGCCAAA+TGG | - | chr5.4:33504246-33504265 | None:intergenic | 40.0% |
| ! | CAGAATGTCACCACAGATTT+TGG | - | chr5.4:33503045-33503064 | None:intergenic | 40.0% |
| ! | GTTCTTGCTGATGCATTGAT+TGG | + | chr5.4:33502125-33502144 | MS.gene53188:intron | 40.0% |
| ! | TCAAATCCTTTCCGACTTGT+TGG | + | chr5.4:33503179-33503198 | MS.gene53188:intron | 40.0% |
| ! | TCCTACTAGAGAGGTTCTAA+AGG | + | chr5.4:33504840-33504859 | MS.gene53188:intron | 40.0% |
| ! | TTTTTGACAAGGTTGGGGTA+AGG | - | chr5.4:33504658-33504677 | None:intergenic | 40.0% |
| !! | ACCTTTAGAACCTCTCTAGT+AGG | - | chr5.4:33504844-33504863 | None:intergenic | 40.0% |
| !! | CATATTTGTTATCCACCTGG+TGG | + | chr5.4:33503355-33503374 | MS.gene53188:intron | 40.0% |
| AAGATCAGTGTTTGCAGTGG+CGG | - | chr5.4:33504053-33504072 | None:intergenic | 45.0% | |
| AATCAGAGGTCCAAAGAGTC+AGG | - | chr5.4:33504351-33504370 | None:intergenic | 45.0% | |
| ACTCTTGTGGTGATTAGGGA+TGG | - | chr5.4:33504614-33504633 | None:intergenic | 45.0% | |
| AGTTGAGTGCAAGTCCAAGA+CGG | - | chr5.4:33504093-33504112 | None:intergenic | 45.0% | |
| CATTTGTCCCCACTAGGATA+TGG | - | chr5.4:33504568-33504587 | None:intergenic | 45.0% | |
| CCCGTTTCATGATTAAGTCC+TGG | + | chr5.4:33503385-33503404 | MS.gene53188:intron | 45.0% | |
| CGAGTGGATGATTACTCTTG+TGG | - | chr5.4:33504627-33504646 | None:intergenic | 45.0% | |
| CTCTTGTGGTGATTAGGGAT+GGG | - | chr5.4:33504613-33504632 | None:intergenic | 45.0% | |
| GAACCGATTGCTTACCTTTC+AGG | - | chr5.4:33504148-33504167 | None:intergenic | 45.0% | |
| GAGAGAGACCCAAGTTTACT+TGG | + | chr5.4:33501834-33501853 | MS.gene53188:CDS | 45.0% | |
| GAGGAACTCTCCAAAATCTG+TGG | + | chr5.4:33503032-33503051 | MS.gene53188:CDS | 45.0% | |
| GAGTTACTGCCAAAAGGTTG+AGG | + | chr5.4:33503010-33503029 | MS.gene53188:CDS | 45.0% | |
| GCCTGAGGTATGTGTAAGAT+TGG | + | chr5.4:33504920-33504939 | MS.gene53188:intron | 45.0% | |
| GGGTAAGGATACAAATCGAG+TGG | - | chr5.4:33504643-33504662 | None:intergenic | 45.0% | |
| GTCTTCAATTGAGCAGAAGG+AGG | + | chr5.4:33502950-33502969 | MS.gene53188:CDS | 45.0% | |
| GTTGGCATTCCATATCCTAG+TGG | + | chr5.4:33504556-33504575 | MS.gene53188:intron | 45.0% | |
| TAATGGCCAACAAGTCGGAA+AGG | - | chr5.4:33503188-33503207 | None:intergenic | 45.0% | |
| TCAACACATCCAATCCGTCT+TGG | + | chr5.4:33504076-33504095 | MS.gene53188:CDS | 45.0% | |
| TCCCCTGATAAGGCACAAAT+TGG | - | chr5.4:33502574-33502593 | None:intergenic | 45.0% | |
| TGAGAGACAACCTGACTCTT+TGG | + | chr5.4:33504338-33504357 | MS.gene53188:CDS | 45.0% | |
| TGATTAGGGATGGGTCAACT+TGG | - | chr5.4:33504604-33504623 | None:intergenic | 45.0% | |
| TGGAAGATCAGTGTTTGCAG+TGG | - | chr5.4:33504056-33504075 | None:intergenic | 45.0% | |
| TGGCATTCCATATCCTAGTG+GGG | + | chr5.4:33504558-33504577 | MS.gene53188:intron | 45.0% | |
| TTACTGCCAAAAGGTTGAGG+AGG | + | chr5.4:33503013-33503032 | MS.gene53188:CDS | 45.0% | |
| ! | AGAGTTCCTCCTCAACCTTT+TGG | - | chr5.4:33503022-33503041 | None:intergenic | 45.0% |
| ! | CAGCAGCCTCTTTTCTTTCT+TGG | - | chr5.4:33503899-33503918 | None:intergenic | 45.0% |
| ! | CGCCTCATCAAAAGCTTGTT+TGG | - | chr5.4:33504254-33504273 | None:intergenic | 45.0% |
| ! | GAAAACATTAGCTTCTGCCG+AGG | - | chr5.4:33503102-33503121 | None:intergenic | 45.0% |
| ! | GGCCAAACAAGCTTTTGATG+AGG | + | chr5.4:33504249-33504268 | MS.gene53188:CDS | 45.0% |
| ! | TTCAGCTTGTTCGGAAAGCT+TGG | - | chr5.4:33501860-33501879 | None:intergenic | 45.0% |
| !! | AGACGGATTGGATGTGTTGA+TGG | - | chr5.4:33504076-33504095 | None:intergenic | 45.0% |
| !! | GATTAAGTCCTGGCTCTACA+GGG | + | chr5.4:33503395-33503414 | MS.gene53188:intron | 45.0% |
| !! | TGATTAAGTCCTGGCTCTAC+AGG | + | chr5.4:33503394-33503413 | MS.gene53188:intron | 45.0% |
| !! | TTACTGGCTCACACGTACTT+TGG | + | chr5.4:33503792-33503811 | MS.gene53188:intron | 45.0% |
| !!! | TAATTTTGTTATTTTTTAAT+GGG | + | chr5.4:33501900-33501919 | MS.gene53188:intron | 5.0% |
| !!! | TTAATTTTGTTATTTTTTAA+TGG | + | chr5.4:33501899-33501918 | MS.gene53188:intron | 5.0% |
| !!! | TTATTTTATTTTAATTTTGA+AGG | + | chr5.4:33502100-33502119 | MS.gene53188:intron | 5.0% |
| AACTTACAGGGCCTGCCATT+TGG | + | chr5.4:33504228-33504247 | MS.gene53188:intron | 50.0% | |
| AGTGCAAGTCCAAGACGGAT+TGG | - | chr5.4:33504088-33504107 | None:intergenic | 50.0% | |
| GAGCAGAAGGAGGAGTCTAA+GGG | + | chr5.4:33502960-33502979 | MS.gene53188:CDS | 50.0% | |
| GCAGTCACTGAAAGGATACG+AGG | + | chr5.4:33503920-33503939 | MS.gene53188:CDS | 50.0% | |
| GGTCTCTCTCTCTTTCTCAG+CGG | - | chr5.4:33501824-33501843 | None:intergenic | 50.0% | |
| TACACATACCTCAGGCTCAG+CGG | - | chr5.4:33504916-33504935 | None:intergenic | 50.0% | |
| TATCCCTTACCTCCATCCTC+TGG | - | chr5.4:33504376-33504395 | None:intergenic | 50.0% | |
| TCCATCCTCTGGCAAATCAG+AGG | - | chr5.4:33504365-33504384 | None:intergenic | 50.0% | |
| TGAGCAGAAGGAGGAGTCTA+AGG | + | chr5.4:33502959-33502978 | MS.gene53188:CDS | 50.0% | |
| TGATGAGGCGATTGCAGAGT+TGG | + | chr5.4:33504264-33504283 | MS.gene53188:CDS | 50.0% | |
| TTAGGGATGGGTCAACTTGG+TGG | - | chr5.4:33504601-33504620 | None:intergenic | 50.0% | |
| TTGCCAGAGGATGGAGGTAA+GGG | + | chr5.4:33504370-33504389 | MS.gene53188:intron | 50.0% | |
| TTGGTGCACGAAGAGCTTCA+TGG | + | chr5.4:33502919-33502938 | MS.gene53188:CDS | 50.0% | |
| TTTGCCAGAGGATGGAGGTA+AGG | + | chr5.4:33504369-33504388 | MS.gene53188:intron | 50.0% | |
| ! | AACATTAGCTTCTGCCGAGG+TGG | - | chr5.4:33503099-33503118 | None:intergenic | 50.0% |
| ! | ACCTCTGATTTGCCAGAGGA+TGG | + | chr5.4:33504361-33504380 | MS.gene53188:CDS | 50.0% |
| ! | AGCTTGTTTGGCCAAATGGC+AGG | - | chr5.4:33504242-33504261 | None:intergenic | 50.0% |
| ! | GGGTCAACTTGGTGGACAAT+GGG | - | chr5.4:33504593-33504612 | None:intergenic | 50.0% |
| ! | TCTGATTTGCCAGAGGATGG+AGG | + | chr5.4:33504364-33504383 | MS.gene53188:CDS | 50.0% |
| ! | TGGGTCAACTTGGTGGACAA+TGG | - | chr5.4:33504594-33504613 | None:intergenic | 50.0% |
| ! | TTGGACCTCTGATTTGCCAG+AGG | + | chr5.4:33504357-33504376 | MS.gene53188:CDS | 50.0% |
| ACACATACCTCAGGCTCAGC+GGG | - | chr5.4:33504915-33504934 | None:intergenic | 55.0% | |
| ATAGGACTCCCTGTAGAGCC+AGG | - | chr5.4:33503406-33503425 | None:intergenic | 55.0% | |
| GAGAGGAACCTCCTCTCTGT+TGG | + | chr5.4:33502882-33502901 | MS.gene53188:CDS | 55.0% | |
| GCTGCTGAGCAGTCACTGAA+AGG | + | chr5.4:33503912-33503931 | MS.gene53188:CDS | 55.0% | |
| TACGGCTGCTCCTACTAGAG+AGG | + | chr5.4:33504831-33504850 | MS.gene53188:intron | 55.0% | |
| TGGAAGCAGGAACCAGATGC+TGG | - | chr5.4:33503079-33503098 | None:intergenic | 55.0% | |
| ! | TCTGGTTCCTGCTTCCACCT+CGG | + | chr5.4:33503082-33503101 | MS.gene53188:CDS | 55.0% |
| !! | TGGGAGCATTTGTCCCCACT+AGG | - | chr5.4:33504574-33504593 | None:intergenic | 55.0% |
| GAAACGGGTGCTCATCCACC+AGG | - | chr5.4:33503373-33503392 | None:intergenic | 60.0% | |
| ! | TACCTCAGGCTCAGCGGGTT+TGG | - | chr5.4:33504910-33504929 | None:intergenic | 60.0% |
| ACGGGTGCTCATCCACCAGG+TGG | - | chr5.4:33503370-33503389 | None:intergenic | 65.0% | |
| AGCCAAACCCGCTGAGCCTG+AGG | + | chr5.4:33504905-33504924 | MS.gene53188:CDS | 65.0% | |
| GCTTCTGCCGAGGTGGAAGC+AGG | - | chr5.4:33503092-33503111 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 33501817 | 33505153 | 33501817 | ID=MS.gene53188 |
| chr5.4 | mRNA | 33501817 | 33505153 | 33501817 | ID=MS.gene53188.t1;Parent=MS.gene53188 |
| chr5.4 | exon | 33501817 | 33501889 | 33501817 | ID=MS.gene53188.t1.exon1;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33501817 | 33501889 | 33501817 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| chr5.4 | exon | 33502826 | 33503132 | 33502826 | ID=MS.gene53188.t1.exon2;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33502826 | 33503132 | 33502826 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| chr5.4 | exon | 33503854 | 33503941 | 33503854 | ID=MS.gene53188.t1.exon3;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33503854 | 33503941 | 33503854 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| chr5.4 | exon | 33504043 | 33504152 | 33504043 | ID=MS.gene53188.t1.exon4;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33504043 | 33504152 | 33504043 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| chr5.4 | exon | 33504237 | 33504385 | 33504237 | ID=MS.gene53188.t1.exon5;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33504237 | 33504385 | 33504237 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| chr5.4 | exon | 33504880 | 33504926 | 33504880 | ID=MS.gene53188.t1.exon6;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33504880 | 33504926 | 33504880 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| chr5.4 | exon | 33505148 | 33505153 | 33505148 | ID=MS.gene53188.t1.exon7;Parent=MS.gene53188.t1 |
| chr5.4 | CDS | 33505148 | 33505153 | 33505148 | ID=cds.MS.gene53188.t1;Parent=MS.gene53188.t1 |
| Gene Sequence |
| Protein sequence |
