Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063037.t1 | XP_013456479.1 | 88.2 | 348 | 6 | 2 | 1 | 317 | 1 | 344 | 1.20E-165 | 592.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063037.t1 | A0A1P8B554 | 68.7 | 249 | 67 | 4 | 6 | 243 | 11 | 259 | 4.1e-93 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063037.t1 | A0A072UXB7 | 88.2 | 348 | 6 | 2 | 1 | 317 | 1 | 344 | 8.8e-166 | 592.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene063037 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene049418 | MS.gene063037 | 0.830824 | 2.36E-55 | -1.69E-46 |
| MS.gene049622 | MS.gene063037 | 0.815401 | 9.42E-52 | -1.69E-46 |
| MS.gene049660 | MS.gene063037 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene063037 | 0.838537 | 2.71E-57 | -1.69E-46 |
| MS.gene050297 | MS.gene063037 | 0.828042 | 1.12E-54 | -1.69E-46 |
| MS.gene05054 | MS.gene063037 | 0.806931 | 6.47E-50 | -1.69E-46 |
| MS.gene050707 | MS.gene063037 | 0.801305 | 9.59E-49 | -1.69E-46 |
| MS.gene051263 | MS.gene063037 | 0.827456 | 1.55E-54 | -1.69E-46 |
| MS.gene051423 | MS.gene063037 | 0.802372 | 5.79E-49 | -1.69E-46 |
| MS.gene051742 | MS.gene063037 | 0.833129 | 6.37E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene063037 | 0.804007 | 2.66E-49 | -1.69E-46 |
| MS.gene051955 | MS.gene063037 | 0.812142 | 4.92E-51 | -1.69E-46 |
| MS.gene052143 | MS.gene063037 | 0.843096 | 1.73E-58 | -1.69E-46 |
| MS.gene052308 | MS.gene063037 | 0.852262 | 5.18E-61 | -1.69E-46 |
| MS.gene052367 | MS.gene063037 | 0.878028 | 3.91E-69 | -1.69E-46 |
| MS.gene052383 | MS.gene063037 | 0.812587 | 3.93E-51 | -1.69E-46 |
| MS.gene053173 | MS.gene063037 | 0.83904 | 2.01E-57 | -1.69E-46 |
| MS.gene053348 | MS.gene063037 | 0.843967 | 1.01E-58 | -1.69E-46 |
| MS.gene053416 | MS.gene063037 | 0.821065 | 4.92E-53 | -1.69E-46 |
| MS.gene053417 | MS.gene063037 | 0.821923 | 3.12E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene063037 | 0.854547 | 1.14E-61 | -1.69E-46 |
| MS.gene054593 | MS.gene063037 | 0.841571 | 4.38E-58 | -1.69E-46 |
| MS.gene054614 | MS.gene063037 | 0.850144 | 2.05E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene063037 | 0.817058 | 4.02E-52 | -1.69E-46 |
| MS.gene054999 | MS.gene063037 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene063037 | 0.855508 | 6.02E-62 | -1.69E-46 |
| MS.gene055578 | MS.gene063037 | 0.844896 | 5.69E-59 | -1.69E-46 |
| MS.gene055579 | MS.gene063037 | 0.821979 | 3.03E-53 | -1.69E-46 |
| MS.gene055957 | MS.gene063037 | 0.854814 | 9.58E-62 | -1.69E-46 |
| MS.gene056041 | MS.gene063037 | 0.884815 | 1.39E-71 | -1.69E-46 |
| MS.gene056042 | MS.gene063037 | 0.839655 | 1.39E-57 | -1.69E-46 |
| MS.gene05640 | MS.gene063037 | 0.832007 | 1.21E-55 | -1.69E-46 |
| MS.gene056526 | MS.gene063037 | 0.841343 | 5.03E-58 | -1.69E-46 |
| MS.gene056528 | MS.gene063037 | 0.817847 | 2.67E-52 | -1.69E-46 |
| MS.gene05652 | MS.gene063037 | 0.825318 | 5.00E-54 | -1.69E-46 |
| MS.gene05709 | MS.gene063037 | 0.800779 | 1.23E-48 | -1.69E-46 |
| MS.gene057458 | MS.gene063037 | 0.843792 | 1.13E-58 | -1.69E-46 |
| MS.gene058128 | MS.gene063037 | 0.813061 | 3.10E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene063037 | 0.820055 | 8.39E-53 | -1.69E-46 |
| MS.gene058828 | MS.gene063037 | 0.805907 | 1.06E-49 | -1.69E-46 |
| MS.gene058849 | MS.gene063037 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene063037 | 0.84808 | 7.70E-60 | -1.69E-46 |
| MS.gene059300 | MS.gene063037 | 0.816025 | 6.84E-52 | -1.69E-46 |
| MS.gene059553 | MS.gene063037 | 0.83821 | 3.29E-57 | -1.69E-46 |
| MS.gene060473 | MS.gene063037 | 0.89313 | 8.37E-75 | -1.69E-46 |
| MS.gene060565 | MS.gene063037 | 0.882292 | 1.18E-70 | -1.69E-46 |
| MS.gene06057 | MS.gene063037 | 0.816966 | 4.21E-52 | -1.69E-46 |
| MS.gene06064 | MS.gene063037 | 0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene060825 | MS.gene063037 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene06093 | MS.gene063037 | 0.847455 | 1.14E-59 | -1.69E-46 |
| MS.gene061099 | MS.gene063037 | 0.830533 | 2.78E-55 | -1.69E-46 |
| MS.gene061260 | MS.gene063037 | 0.870655 | 1.24E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063037.t1 | MTR_4g073720 | 88.218 | 348 | 6 | 2 | 1 | 317 | 1 | 344 | 0.0 | 593 |
| MS.gene063037.t1 | MTR_5g022350 | 57.419 | 310 | 116 | 5 | 11 | 317 | 15 | 311 | 1.79e-119 | 346 |
| MS.gene063037.t1 | MTR_8g075510 | 69.787 | 235 | 65 | 3 | 14 | 245 | 18 | 249 | 1.47e-115 | 334 |
| MS.gene063037.t1 | MTR_8g075510 | 62.963 | 270 | 94 | 3 | 14 | 280 | 18 | 284 | 1.56e-114 | 333 |
| MS.gene063037.t1 | MTR_1g025420 | 61.977 | 263 | 88 | 6 | 8 | 258 | 3 | 265 | 1.09e-104 | 309 |
| MS.gene063037.t1 | MTR_1g025420 | 63.600 | 250 | 79 | 6 | 8 | 246 | 3 | 251 | 2.00e-103 | 304 |
| MS.gene063037.t1 | MTR_8g037890 | 57.588 | 257 | 101 | 5 | 9 | 257 | 9 | 265 | 4.45e-97 | 289 |
| MS.gene063037.t1 | MTR_8g075550 | 61.506 | 239 | 80 | 4 | 20 | 247 | 23 | 260 | 2.27e-95 | 285 |
| MS.gene063037.t1 | MTR_3g114030 | 63.478 | 230 | 76 | 5 | 21 | 242 | 3 | 232 | 1.09e-94 | 280 |
| MS.gene063037.t1 | MTR_5g022310 | 54.815 | 270 | 110 | 5 | 9 | 266 | 9 | 278 | 1.66e-92 | 277 |
| MS.gene063037.t1 | MTR_5g022310 | 57.430 | 249 | 94 | 5 | 9 | 246 | 9 | 256 | 5.89e-92 | 274 |
| MS.gene063037.t1 | MTR_4g073730 | 55.285 | 246 | 100 | 4 | 3 | 240 | 5 | 248 | 4.82e-90 | 270 |
| MS.gene063037.t1 | MTR_4g073730 | 55.285 | 246 | 100 | 4 | 3 | 240 | 5 | 248 | 1.04e-89 | 271 |
| MS.gene063037.t1 | MTR_8g056820 | 55.777 | 251 | 101 | 6 | 4 | 246 | 7 | 255 | 3.45e-89 | 267 |
| MS.gene063037.t1 | MTR_6g079580 | 53.586 | 237 | 103 | 4 | 9 | 240 | 6 | 240 | 6.91e-88 | 263 |
| MS.gene063037.t1 | MTR_3g111620 | 55.263 | 228 | 94 | 5 | 23 | 244 | 25 | 250 | 2.12e-84 | 254 |
| MS.gene063037.t1 | MTR_8g036215 | 53.333 | 240 | 105 | 4 | 4 | 239 | 1 | 237 | 2.71e-84 | 254 |
| MS.gene063037.t1 | MTR_1g021945 | 56.637 | 226 | 90 | 4 | 25 | 244 | 26 | 249 | 3.39e-83 | 251 |
| MS.gene063037.t1 | MTR_8g107140 | 50.612 | 245 | 114 | 4 | 3 | 242 | 5 | 247 | 1.40e-82 | 250 |
| MS.gene063037.t1 | MTR_1g062590 | 53.252 | 246 | 102 | 7 | 4 | 240 | 1 | 242 | 8.54e-80 | 243 |
| MS.gene063037.t1 | MTR_7g102380 | 50.206 | 243 | 114 | 5 | 6 | 242 | 2 | 243 | 1.29e-79 | 242 |
| MS.gene063037.t1 | MTR_1g062630 | 52.419 | 248 | 105 | 7 | 4 | 242 | 1 | 244 | 2.00e-79 | 243 |
| MS.gene063037.t1 | MTR_1g062660 | 52.846 | 246 | 107 | 7 | 4 | 242 | 1 | 244 | 8.76e-77 | 235 |
| MS.gene063037.t1 | MTR_1g062370 | 52.016 | 248 | 106 | 7 | 4 | 242 | 1 | 244 | 2.41e-76 | 234 |
| MS.gene063037.t1 | MTR_1g062350 | 52.016 | 248 | 106 | 7 | 4 | 242 | 1 | 244 | 2.51e-76 | 234 |
| MS.gene063037.t1 | MTR_2g069660 | 50.833 | 240 | 108 | 5 | 8 | 240 | 7 | 243 | 4.06e-76 | 233 |
| MS.gene063037.t1 | MTR_1g062340 | 53.165 | 237 | 101 | 6 | 12 | 242 | 12 | 244 | 2.36e-75 | 231 |
| MS.gene063037.t1 | MTR_5g059200 | 48.000 | 250 | 119 | 7 | 23 | 269 | 27 | 268 | 2.35e-72 | 225 |
| MS.gene063037.t1 | MTR_2g068655 | 49.351 | 231 | 111 | 4 | 21 | 245 | 27 | 257 | 1.58e-70 | 221 |
| MS.gene063037.t1 | MTR_2g068030 | 49.772 | 219 | 104 | 4 | 27 | 239 | 25 | 243 | 4.78e-70 | 218 |
| MS.gene063037.t1 | MTR_2g067980 | 50.218 | 229 | 106 | 4 | 22 | 242 | 21 | 249 | 1.74e-68 | 231 |
| MS.gene063037.t1 | MTR_3g068015 | 45.982 | 224 | 114 | 4 | 23 | 240 | 26 | 248 | 3.05e-68 | 213 |
| MS.gene063037.t1 | MTR_7g062610 | 45.378 | 238 | 120 | 4 | 8 | 240 | 10 | 242 | 2.00e-66 | 209 |
| MS.gene063037.t1 | MTR_6g009480 | 43.701 | 254 | 129 | 8 | 1 | 241 | 1 | 253 | 2.11e-64 | 204 |
| MS.gene063037.t1 | MTR_4g063630 | 45.798 | 238 | 116 | 8 | 13 | 239 | 16 | 251 | 8.50e-63 | 199 |
| MS.gene063037.t1 | MTR_5g022350 | 67.808 | 146 | 42 | 2 | 11 | 154 | 80 | 222 | 5.24e-62 | 196 |
| MS.gene063037.t1 | MTR_1g062690 | 45.344 | 247 | 100 | 7 | 4 | 242 | 1 | 220 | 3.10e-60 | 192 |
| MS.gene063037.t1 | MTR_5g010635 | 46.575 | 219 | 97 | 10 | 25 | 240 | 24 | 225 | 7.44e-50 | 166 |
| MS.gene063037.t1 | MTR_5g023850 | 40.711 | 253 | 103 | 9 | 4 | 246 | 7 | 222 | 3.64e-49 | 164 |
| MS.gene063037.t1 | MTR_8g096900 | 41.453 | 234 | 114 | 10 | 11 | 240 | 34 | 248 | 7.29e-47 | 158 |
| MS.gene063037.t1 | MTR_5g010640 | 38.800 | 250 | 129 | 10 | 1 | 240 | 1 | 236 | 3.68e-45 | 154 |
| MS.gene063037.t1 | MTR_2g067990 | 42.291 | 227 | 101 | 8 | 21 | 242 | 23 | 224 | 1.61e-44 | 162 |
| MS.gene063037.t1 | MTR_8g089020 | 47.134 | 157 | 59 | 3 | 79 | 232 | 21 | 156 | 1.39e-41 | 142 |
| MS.gene063037.t1 | MTR_2g067970 | 41.270 | 189 | 102 | 5 | 67 | 247 | 2 | 189 | 1.01e-39 | 149 |
| MS.gene063037.t1 | MTR_7g076360 | 36.893 | 206 | 72 | 3 | 25 | 230 | 8 | 155 | 9.93e-38 | 132 |
| MS.gene063037.t1 | MTR_2g063150 | 30.738 | 244 | 150 | 7 | 3 | 232 | 4 | 242 | 2.10e-34 | 126 |
| MS.gene063037.t1 | MTR_1g062390 | 30.769 | 247 | 149 | 7 | 6 | 241 | 4 | 239 | 6.42e-31 | 117 |
| MS.gene063037.t1 | MTR_8g096910 | 44.304 | 158 | 73 | 8 | 9 | 164 | 6 | 150 | 1.03e-26 | 103 |
| MS.gene063037.t1 | MTR_8g096920 | 44.928 | 138 | 62 | 7 | 4 | 139 | 1 | 126 | 3.99e-26 | 102 |
| MS.gene063037.t1 | MTR_1g062640 | 39.130 | 115 | 68 | 2 | 51 | 164 | 33 | 146 | 7.67e-18 | 79.3 |
| MS.gene063037.t1 | MTR_3g081550 | 50.526 | 95 | 40 | 4 | 109 | 196 | 15 | 109 | 1.98e-16 | 74.3 |
| MS.gene063037.t1 | MTR_5g068670 | 48.864 | 88 | 34 | 4 | 62 | 141 | 5 | 89 | 1.34e-14 | 70.1 |
| MS.gene063037.t1 | MTR_8g088960 | 45.946 | 74 | 36 | 3 | 125 | 196 | 14 | 85 | 4.09e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063037.t1 | AT4G38660 | 65.089 | 338 | 88 | 7 | 5 | 314 | 9 | 344 | 1.57e-142 | 406 |
| MS.gene063037.t1 | AT4G38660 | 66.149 | 322 | 80 | 6 | 20 | 314 | 3 | 322 | 3.16e-139 | 397 |
| MS.gene063037.t1 | AT4G24180 | 68.651 | 252 | 69 | 4 | 5 | 248 | 10 | 259 | 5.58e-121 | 350 |
| MS.gene063037.t1 | AT4G24180 | 68.235 | 255 | 70 | 4 | 5 | 248 | 10 | 264 | 9.91e-121 | 349 |
| MS.gene063037.t1 | AT4G24180 | 68.826 | 247 | 67 | 4 | 5 | 243 | 10 | 254 | 4.11e-119 | 343 |
| MS.gene063037.t1 | AT4G24180 | 68.400 | 250 | 68 | 4 | 5 | 243 | 10 | 259 | 6.36e-119 | 343 |
| MS.gene063037.t1 | AT4G24180 | 67.249 | 229 | 65 | 4 | 5 | 225 | 10 | 236 | 1.15e-106 | 314 |
| MS.gene063037.t1 | AT4G24180 | 66.379 | 232 | 67 | 4 | 5 | 225 | 10 | 241 | 1.48e-106 | 314 |
| MS.gene063037.t1 | AT1G75800 | 58.462 | 260 | 95 | 6 | 1 | 249 | 1 | 258 | 4.40e-97 | 290 |
| MS.gene063037.t1 | AT1G20030 | 64.502 | 231 | 72 | 5 | 21 | 241 | 16 | 246 | 4.44e-96 | 287 |
| MS.gene063037.t1 | AT1G20030 | 65.487 | 226 | 68 | 5 | 26 | 241 | 4 | 229 | 3.48e-95 | 284 |
| MS.gene063037.t1 | AT4G36010 | 58.468 | 248 | 90 | 5 | 21 | 255 | 19 | 266 | 7.69e-93 | 278 |
| MS.gene063037.t1 | AT4G36010 | 58.468 | 248 | 90 | 5 | 21 | 255 | 19 | 266 | 7.69e-93 | 278 |
| MS.gene063037.t1 | AT1G19320 | 56.048 | 248 | 98 | 5 | 1 | 239 | 1 | 246 | 4.36e-91 | 271 |
| MS.gene063037.t1 | AT2G17860 | 54.688 | 256 | 102 | 6 | 1 | 245 | 1 | 253 | 3.41e-89 | 267 |
| MS.gene063037.t1 | AT1G75030 | 57.200 | 250 | 92 | 8 | 1 | 241 | 1 | 244 | 3.92e-89 | 266 |
| MS.gene063037.t1 | AT1G75040 | 56.148 | 244 | 98 | 6 | 1 | 240 | 1 | 239 | 2.31e-86 | 259 |
| MS.gene063037.t1 | AT1G75050 | 57.025 | 242 | 91 | 7 | 9 | 241 | 7 | 244 | 2.97e-86 | 259 |
| MS.gene063037.t1 | AT1G18250 | 56.000 | 225 | 92 | 4 | 23 | 242 | 19 | 241 | 1.95e-85 | 257 |
| MS.gene063037.t1 | AT1G18250 | 56.502 | 223 | 90 | 4 | 25 | 242 | 22 | 242 | 2.35e-85 | 257 |
| MS.gene063037.t1 | AT1G73620 | 56.250 | 224 | 91 | 4 | 23 | 241 | 40 | 261 | 3.11e-84 | 255 |
| MS.gene063037.t1 | AT4G38670 | 55.556 | 243 | 97 | 6 | 9 | 240 | 5 | 247 | 3.13e-83 | 253 |
| MS.gene063037.t1 | AT4G38670 | 55.556 | 243 | 97 | 6 | 9 | 240 | 5 | 247 | 3.13e-83 | 253 |
| MS.gene063037.t1 | AT4G38670 | 58.482 | 224 | 84 | 5 | 26 | 240 | 8 | 231 | 8.75e-83 | 251 |
| MS.gene063037.t1 | AT5G24620 | 52.419 | 248 | 102 | 6 | 25 | 257 | 25 | 271 | 8.04e-82 | 254 |
| MS.gene063037.t1 | AT5G24620 | 52.419 | 248 | 102 | 6 | 25 | 257 | 80 | 326 | 1.41e-81 | 255 |
| MS.gene063037.t1 | AT5G24620 | 52.419 | 248 | 102 | 6 | 25 | 257 | 101 | 347 | 2.03e-81 | 255 |
| MS.gene063037.t1 | AT4G36000 | 60.000 | 215 | 73 | 6 | 101 | 314 | 1 | 203 | 2.69e-76 | 233 |
| MS.gene063037.t1 | AT4G36000 | 60.000 | 215 | 73 | 6 | 101 | 314 | 1 | 203 | 2.69e-76 | 233 |
| MS.gene063037.t1 | AT1G77700 | 49.576 | 236 | 109 | 6 | 9 | 241 | 45 | 273 | 1.59e-74 | 232 |
| MS.gene063037.t1 | AT1G77700 | 49.587 | 242 | 111 | 7 | 4 | 241 | 39 | 273 | 3.31e-74 | 231 |
| MS.gene063037.t1 | AT1G77700 | 51.351 | 222 | 98 | 6 | 23 | 241 | 87 | 301 | 1.09e-73 | 231 |
| MS.gene063037.t1 | AT5G38280 | 47.131 | 244 | 113 | 5 | 21 | 248 | 21 | 264 | 1.65e-72 | 236 |
| MS.gene063037.t1 | AT5G38280 | 47.131 | 244 | 113 | 5 | 21 | 248 | 21 | 264 | 2.46e-72 | 236 |
| MS.gene063037.t1 | AT5G40020 | 43.426 | 251 | 132 | 4 | 1 | 242 | 1 | 250 | 6.40e-68 | 213 |
| MS.gene063037.t1 | AT2G28790 | 47.755 | 245 | 115 | 8 | 4 | 239 | 33 | 273 | 2.00e-65 | 207 |
| MS.gene063037.t1 | AT2G28790 | 47.755 | 245 | 115 | 8 | 4 | 239 | 8 | 248 | 2.24e-65 | 206 |
| MS.gene063037.t1 | AT5G02140 | 45.992 | 237 | 121 | 5 | 10 | 240 | 6 | 241 | 1.68e-64 | 205 |
| MS.gene063037.t1 | AT5G02140 | 45.992 | 237 | 121 | 5 | 10 | 240 | 6 | 241 | 2.29e-64 | 203 |
| MS.gene063037.t1 | AT4G18253 | 39.834 | 241 | 136 | 3 | 9 | 245 | 8 | 243 | 5.47e-55 | 179 |
| MS.gene063037.t1 | AT4G11650 | 43.846 | 260 | 122 | 12 | 2 | 257 | 3 | 242 | 5.83e-53 | 174 |
| MS.gene063037.t1 | AT1G70250 | 39.764 | 254 | 130 | 8 | 26 | 266 | 146 | 389 | 1.07e-51 | 182 |
| MS.gene063037.t1 | AT4G18250 | 40.506 | 237 | 132 | 5 | 23 | 254 | 55 | 287 | 1.62e-44 | 161 |
| MS.gene063037.t1 | AT5G24620 | 51.429 | 140 | 55 | 4 | 131 | 257 | 15 | 154 | 3.44e-39 | 140 |
| MS.gene063037.t1 | AT2G24810 | 61.039 | 77 | 27 | 1 | 166 | 239 | 116 | 192 | 8.46e-26 | 102 |
Find 0 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTAAAACATAGACAA+AGG | + | 33362:8948-8967 | None:intergenic | 15.0% |
| !! | ATTAATAGTAGATTTATTGT+TGG | - | 33362:10055-10074 | MS.gene063037:CDS | 15.0% |
| !!! | ATGTTAAAAGTATGTTAATT+AGG | - | 33362:9732-9751 | MS.gene063037:intron | 15.0% |
| !!! | TGTTAAAAGTATGTTAATTA+GGG | - | 33362:9733-9752 | MS.gene063037:intron | 15.0% |
| !!! | TTGATTAATTTTATTTACCT+TGG | + | 33362:9695-9714 | None:intergenic | 15.0% |
| !!! | AATTTTGTGATTGTAGAAAT+TGG | - | 33362:10278-10297 | MS.gene063037:CDS | 20.0% |
| !!! | TTTTTAACATGTTTTTGTTC+AGG | - | 33362:9005-9024 | MS.gene063037:intron | 20.0% |
| ! | GTCAGAAATTATTCTTCAAA+AGG | + | 33362:9854-9873 | None:intergenic | 25.0% |
| ! | TAACAACATTGTCGTATAAT+GGG | + | 33362:9760-9779 | None:intergenic | 25.0% |
| ! | TTAACAACATTGTCGTATAA+TGG | + | 33362:9761-9780 | None:intergenic | 25.0% |
| !!! | TTGTTGGCATTTAATTTGTT+AGG | - | 33362:10071-10090 | MS.gene063037:CDS | 25.0% |
| AAAGAGAGTGATATAAGTTG+AGG | + | 33362:8888-8907 | None:intergenic | 30.0% | |
| AAAGTCATGTAATGTCATCA+TGG | - | 33362:9922-9941 | MS.gene063037:CDS | 30.0% | |
| AACTAGTCATCTTAAGCAAA+CGG | - | 33362:10114-10133 | MS.gene063037:CDS | 30.0% | |
| ATCTTAAGCAAACGGTTAAA+TGG | - | 33362:10122-10141 | MS.gene063037:CDS | 30.0% | |
| ATTTCCACTTTCAGATTTGT+AGG | - | 33362:9973-9992 | MS.gene063037:CDS | 30.0% | |
| GATTGTAACAACTTGTGATA+TGG | - | 33362:10303-10322 | MS.gene063037:CDS | 30.0% | |
| TGAAAATGGAGTTCAATACA+CGG | - | 33362:10430-10449 | MS.gene063037:CDS | 30.0% | |
| TTAAAAACTAAGTTCCCCTT+TGG | + | 33362:10025-10044 | None:intergenic | 30.0% | |
| TTTATTTACCTTGGAGAAGA+TGG | + | 33362:9686-9705 | None:intergenic | 30.0% | |
| TTTCCACTTTCAGATTTGTA+GGG | - | 33362:9974-9993 | MS.gene063037:CDS | 30.0% | |
| ! | TCTGCATTTGTTTACTCTTT+TGG | - | 33362:10599-10618 | MS.gene063037:CDS | 30.0% |
| !! | AAAGGTTGTGTTTTTACCTT+TGG | + | 33362:8930-8949 | None:intergenic | 30.0% |
| !! | AAGGGGAACTTAGTTTTTAA+TGG | - | 33362:10025-10044 | MS.gene063037:CDS | 30.0% |
| !! | AAGGTTGTGTTTTTACCTTT+GGG | + | 33362:8929-8948 | None:intergenic | 30.0% |
| !!! | GTTAGCGTTTTTTGTTTTGA+AGG | + | 33362:8975-8994 | None:intergenic | 30.0% |
| AAACCCTACAAATCTGAAAG+TGG | + | 33362:9980-9999 | None:intergenic | 35.0% | |
| AACATTTCCGAGTAAATCGA+CGG | + | 33362:9569-9588 | None:intergenic | 35.0% | |
| AATCTACCCATGATTGTTGA+AGG | - | 33362:9371-9390 | MS.gene063037:intron | 35.0% | |
| AGAAGATGGACAAAAGGTAA+CGG | + | 33362:9672-9691 | None:intergenic | 35.0% | |
| ATAAAATCCCACTTGCTCAA+AGG | - | 33362:10215-10234 | MS.gene063037:CDS | 35.0% | |
| ATTCAGTTCCCGTAAATTCA+GGG | - | 33362:10474-10493 | MS.gene063037:CDS | 35.0% | |
| GAAAATGGAGTTCAATACAC+GGG | - | 33362:10431-10450 | MS.gene063037:CDS | 35.0% | |
| GTTTGTTTCCATGTAACCAT+AGG | - | 33362:9996-10015 | MS.gene063037:CDS | 35.0% | |
| TAAAATCCCACTTGCTCAAA+GGG | - | 33362:10216-10235 | MS.gene063037:CDS | 35.0% | |
| TATTCAGTTCCCGTAAATTC+AGG | - | 33362:10473-10492 | MS.gene063037:CDS | 35.0% | |
| TCAAACATGGTAGAATGCAA+CGG | - | 33362:9257-9276 | MS.gene063037:intron | 35.0% | |
| TGGATCATATTTAGCTGGAT+TGG | - | 33362:10547-10566 | MS.gene063037:intron | 35.0% | |
| ! | TACTTTTACTTGTACTGCTG+CGG | - | 33362:9640-9659 | MS.gene063037:intron | 35.0% |
| ! | TTGAACTCCATTTTCAGATC+CGG | + | 33362:10426-10445 | None:intergenic | 35.0% |
| !! | TGTTTTTGTTCAGGTATCAC+TGG | - | 33362:9014-9033 | MS.gene063037:intron | 35.0% |
| AAGCGTAGCTATACGATCTA+GGG | + | 33362:9604-9623 | None:intergenic | 40.0% | |
| ACAAATGTGCCTACACAGTA+TGG | - | 33362:9057-9076 | MS.gene063037:intron | 40.0% | |
| ACCAGAACCTTCAACAATCA+TGG | + | 33362:9381-9400 | None:intergenic | 40.0% | |
| ATATGATCCATCTGCAAGCA+TGG | + | 33362:10537-10556 | None:intergenic | 40.0% | |
| ATGTAACCATAGGTAGCCAA+AGG | - | 33362:10006-10025 | MS.gene063037:CDS | 40.0% | |
| CCAGAACCTTCAACAATCAT+GGG | + | 33362:9380-9399 | None:intergenic | 40.0% | |
| GCAGATGGATCATATTTAGC+TGG | - | 33362:10542-10561 | MS.gene063037:intron | 40.0% | |
| TAAGCGTAGCTATACGATCT+AGG | + | 33362:9605-9624 | None:intergenic | 40.0% | |
| TCAGCATCTAATTCAGGATC+AGG | - | 33362:10503-10522 | MS.gene063037:intron | 40.0% | |
| TCCTGAATTAGATGCTGATC+CGG | + | 33362:10501-10520 | None:intergenic | 40.0% | |
| TGCAGATGAAGTTGTTGTAG+AGG | + | 33362:10585-10604 | None:intergenic | 40.0% | |
| TGTAACCATAGGTAGCCAAA+GGG | - | 33362:10007-10026 | MS.gene063037:CDS | 40.0% | |
| TTTGGCTACCTATGGTTACA+TGG | + | 33362:10007-10026 | None:intergenic | 40.0% | |
| ! | AGTCCTGAGTATTGTTGTAG+TGG | - | 33362:9515-9534 | MS.gene063037:intron | 40.0% |
| ! | ATGATTGTTGAAGGTTCTGG+TGG | - | 33362:9380-9399 | MS.gene063037:intron | 40.0% |
| ! | TGATTGTTGAAGGTTCTGGT+GGG | - | 33362:9381-9400 | MS.gene063037:intron | 40.0% |
| !! | ATATTTAGCTGGATTGGCCA+TGG | - | 33362:10553-10572 | MS.gene063037:intron | 40.0% |
| !! | TATTTAGCTGGATTGGCCAT+GGG | - | 33362:10554-10573 | MS.gene063037:intron | 40.0% |
| !! | TGTTTTTACCTTTGGGAGTG+AGG | + | 33362:8922-8941 | None:intergenic | 40.0% |
| AAAGTGCGAGTGGTTTCTTG+TGG | + | 33362:9140-9159 | None:intergenic | 45.0% | |
| AATACCTGGCCATACTGTGT+AGG | + | 33362:9069-9088 | None:intergenic | 45.0% | |
| ACACTACCCTTTGAGCAAGT+GGG | + | 33362:10225-10244 | None:intergenic | 45.0% | |
| ACGGGAACTGAATACCCAAT+GGG | + | 33362:10467-10486 | None:intergenic | 45.0% | |
| ATGACCTCAACACCAATACC+AGG | - | 33362:10365-10384 | MS.gene063037:CDS | 45.0% | |
| CCCATGATTGTTGAAGGTTC+TGG | - | 33362:9377-9396 | MS.gene063037:intron | 45.0% | |
| CCTTGGAGAAGATGGACAAA+AGG | + | 33362:9678-9697 | None:intergenic | 45.0% | |
| GAGTTCACTCTTGGCACTAT+AGG | - | 33362:9311-9330 | MS.gene063037:intron | 45.0% | |
| GCATCTAATTCAGGATCAGG+AGG | - | 33362:10506-10525 | MS.gene063037:intron | 45.0% | |
| GTAACCATAGGTAGCCAAAG+GGG | - | 33362:10008-10027 | MS.gene063037:CDS | 45.0% | |
| GTTGAGGTCATTGGAGTTGT+TGG | + | 33362:10356-10375 | None:intergenic | 45.0% | |
| GTTGGAACCGGATCTGAAAA+TGG | - | 33362:10416-10435 | MS.gene063037:CDS | 45.0% | |
| TACACTACCCTTTGAGCAAG+TGG | + | 33362:10226-10245 | None:intergenic | 45.0% | |
| TACGGGAACTGAATACCCAA+TGG | + | 33362:10468-10487 | None:intergenic | 45.0% | |
| TATTGTTGTAGTGGCGCGTA+TGG | - | 33362:9524-9543 | MS.gene063037:intron | 45.0% | |
| TCCGGATCAGCATCTAATTC+AGG | - | 33362:10497-10516 | MS.gene063037:intron | 45.0% | |
| TGATCCGGACCCTGAATTTA+CGG | + | 33362:10486-10505 | None:intergenic | 45.0% | |
| TTCTTGTGGAAGCTCGAAAC+CGG | + | 33362:9126-9145 | None:intergenic | 45.0% | |
| ! | CCTTTTGTCCATCTTCTCCA+AGG | - | 33362:9675-9694 | MS.gene063037:intron | 45.0% |
| ! | CTTCTTTTCCTCACTCCCAA+AGG | - | 33362:8911-8930 | MS.gene063037:CDS | 45.0% |
| !! | GGTATTGGTGTTGAGGTCAT+TGG | + | 33362:10365-10384 | None:intergenic | 45.0% |
| !! | TTGTAGGCCGTCGATTTACT+CGG | - | 33362:9559-9578 | MS.gene063037:intron | 45.0% |
| AATGCTGGTAGCCCAACACT+CGG | - | 33362:9095-9114 | MS.gene063037:CDS | 50.0% | |
| ACCCTAGCTGAGTTCACTCT+TGG | - | 33362:9302-9321 | MS.gene063037:intron | 50.0% | |
| AGTTCCCCTTTGGCTACCTA+TGG | + | 33362:10015-10034 | None:intergenic | 50.0% | |
| ATGGTAGAATGCAACGGTGC+CGG | - | 33362:9263-9282 | MS.gene063037:intron | 50.0% | |
| CAACACCAATACCAGGAGCA+GGG | - | 33362:10372-10391 | MS.gene063037:CDS | 50.0% | |
| CATGTTTGAGCCACAGTCTC+CGG | + | 33362:9246-9265 | None:intergenic | 50.0% | |
| CCAGCATTTGCGAGAATACC+TGG | + | 33362:9083-9102 | None:intergenic | 50.0% | |
| CCAGGTATTCTCGCAAATGC+TGG | - | 33362:9080-9099 | MS.gene063037:CDS | 50.0% | |
| GATCCGGACCCTGAATTTAC+GGG | + | 33362:10485-10504 | None:intergenic | 50.0% | |
| GCCAAGAGTGAACTCAGCTA+GGG | + | 33362:9306-9325 | None:intergenic | 50.0% | |
| GCGCCACTACAACAATACTC+AGG | + | 33362:9521-9540 | None:intergenic | 50.0% | |
| GGAGAAACCATGCTTGCAGA+TGG | - | 33362:10527-10546 | MS.gene063037:intron | 50.0% | |
| GGATCTGAACCAGCAATGTC+CGG | - | 33362:9436-9455 | MS.gene063037:intron | 50.0% | |
| GTTCCCGTAAATTCAGGGTC+CGG | - | 33362:10479-10498 | MS.gene063037:intron | 50.0% | |
| TACGACGTGAGTCTCGTTGA+TGG | - | 33362:9344-9363 | MS.gene063037:intron | 50.0% | |
| TCAACACCAATACCAGGAGC+AGG | - | 33362:10371-10390 | MS.gene063037:CDS | 50.0% | |
| TGCCAAGAGTGAACTCAGCT+AGG | + | 33362:9307-9326 | None:intergenic | 50.0% | |
| ! | ATGGTTCACCGGCTACTTGT+AGG | - | 33362:9543-9562 | MS.gene063037:intron | 50.0% |
| ! | TGTTGAAGGTTCTGGTGGGT+CGG | - | 33362:9385-9404 | MS.gene063037:intron | 50.0% |
| !! | AAGAGTGCGTGTGAGGCTTT+TGG | - | 33362:9491-9510 | MS.gene063037:intron | 50.0% |
| !! | TGCTCCTGGTATTGGTGTTG+AGG | + | 33362:10372-10391 | None:intergenic | 50.0% |
| AAACCGGTGCTTCCGAGTGT+TGG | + | 33362:9110-9129 | None:intergenic | 55.0% | |
| AACCGGTGCTTCCGAGTGTT+GGG | + | 33362:9109-9128 | None:intergenic | 55.0% | |
| AACTCAGCTAGGGTTGCTGG+TGG | + | 33362:9296-9315 | None:intergenic | 55.0% | |
| AACTTCGACGGATCCGGAAC+CGG | - | 33362:9209-9228 | MS.gene063037:intron | 55.0% | |
| ACGGGTACAGACACACCCAT+TGG | - | 33362:10449-10468 | MS.gene063037:CDS | 55.0% | |
| ACTGTCCCTGCTCCTGGTAT+TGG | + | 33362:10380-10399 | None:intergenic | 55.0% | |
| ATCGACGGCCTACAAGTAGC+CGG | + | 33362:9554-9573 | None:intergenic | 55.0% | |
| CAGGAGCAGGGACAGTGATA+GGG | - | 33362:10384-10403 | MS.gene063037:CDS | 55.0% | |
| CGAACCGGTTGCAACTTCGA+CGG | - | 33362:9197-9216 | MS.gene063037:intron | 55.0% | |
| CGGAGACTGTGGCTCAAACA+TGG | - | 33362:9244-9263 | MS.gene063037:intron | 55.0% | |
| CGGGTACAGACACACCCATT+GGG | - | 33362:10450-10469 | MS.gene063037:CDS | 55.0% | |
| GACAGTGATAGGGACTCCTG+AGG | - | 33362:10394-10413 | MS.gene063037:CDS | 55.0% | |
| GCGGAGTTGAGAGCTTCAGA+TGG | - | 33362:9458-9477 | MS.gene063037:intron | 55.0% | |
| GGATCCGTCGAAGTTGCAAC+CGG | + | 33362:9204-9223 | None:intergenic | 55.0% | |
| GGTTGCAACTTCGACGGATC+CGG | - | 33362:9203-9222 | MS.gene063037:intron | 55.0% | |
| GTCTCCGGTGAGACATGAAC+CGG | + | 33362:9231-9250 | None:intergenic | 55.0% | |
| GTGAACTCAGCTAGGGTTGC+TGG | + | 33362:9299-9318 | None:intergenic | 55.0% | |
| GTGATAGGGACTCCTGAGGT+TGG | - | 33362:10398-10417 | MS.gene063037:CDS | 55.0% | |
| GTTCAGATCCGACGTACACC+CGG | + | 33362:9426-9445 | None:intergenic | 55.0% | |
| TAGTGGCGCGTATGGTTCAC+CGG | - | 33362:9532-9551 | MS.gene063037:intron | 55.0% | |
| TCAGATCCGGTTCCAACCTC+AGG | + | 33362:10413-10432 | None:intergenic | 55.0% | |
| TCATGTCTCACCGGAGACTG+TGG | - | 33362:9233-9252 | MS.gene063037:intron | 55.0% | |
| TCGGGTATGTGTGAGTCCAC+CGG | - | 33362:9404-9423 | MS.gene063037:intron | 55.0% | |
| TCTGAACCAGCAATGTCCGG+CGG | - | 33362:9439-9458 | MS.gene063037:intron | 55.0% | |
| TGTGCCTACACAGTATGGCC+AGG | - | 33362:9062-9081 | MS.gene063037:intron | 55.0% | |
| TGTTGTAGAGGAGCCTCCCA+TGG | + | 33362:10573-10592 | None:intergenic | 55.0% | |
| ! | GGAACCGGTTCATGTCTCAC+CGG | - | 33362:9224-9243 | MS.gene063037:intron | 55.0% |
| ! | GGTGAGACATGAACCGGTTC+CGG | + | 33362:9225-9244 | None:intergenic | 55.0% |
| ! | GTTGAAGGTTCTGGTGGGTC+GGG | - | 33362:9386-9405 | MS.gene063037:intron | 55.0% |
| ! | TCTGAAGCTCTCAACTCCGC+CGG | + | 33362:9458-9477 | None:intergenic | 55.0% |
| ! | TGGAGCTTGGAAAGTGCGAG+TGG | + | 33362:9150-9169 | None:intergenic | 55.0% |
| !! | TTAGCTGGATTGGCCATGGG+AGG | - | 33362:10557-10576 | MS.gene063037:intron | 55.0% |
| CCAGGAGCAGGGACAGTGAT+AGG | - | 33362:10383-10402 | MS.gene063037:CDS | 60.0% | |
| CCTATCACTGTCCCTGCTCC+TGG | + | 33362:10386-10405 | None:intergenic | 60.0% | |
| CGCACTTTCCAAGCTCCAGC+CGG | - | 33362:9152-9171 | MS.gene063037:CDS | 60.0% | |
| CGGGTATGTGTGAGTCCACC+GGG | - | 33362:9405-9424 | MS.gene063037:intron | 60.0% | |
| CTTTCCAAGCTCCAGCCGGT+TGG | - | 33362:9156-9175 | MS.gene063037:CDS | 60.0% | |
| GGGACTCCTGAGGTTGGAAC+CGG | - | 33362:10404-10423 | MS.gene063037:CDS | 60.0% | |
| TCAACTCCGCCGGACATTGC+TGG | + | 33362:9448-9467 | None:intergenic | 60.0% | |
| TGAGTCCACCGGGTGTACGT+CGG | - | 33362:9415-9434 | MS.gene063037:intron | 60.0% | |
| ! | AGCCCAACACTCGGAAGCAC+CGG | - | 33362:9104-9123 | MS.gene063037:CDS | 60.0% |
| ! | CGCGTGTAAGAGTGCGTGTG+AGG | - | 33362:9484-9503 | MS.gene063037:intron | 60.0% |
| !! | AACCGGTTCGAGCCCAGAAC+CGG | + | 33362:9187-9206 | None:intergenic | 60.0% |
| CAGATCCGACGTACACCCGG+TGG | + | 33362:9423-9442 | None:intergenic | 65.0% | |
| ! | CAAGCTCCAGCCGGTTGGTC+CGG | - | 33362:9161-9180 | MS.gene063037:CDS | 65.0% |
| ! | GGTTGCTGGTGGTGCAGCTC+CGG | + | 33362:9285-9304 | None:intergenic | 65.0% |
| CCAGAACCGGCCGGACCAAC+CGG | + | 33362:9174-9193 | None:intergenic | 70.0% | |
| CGGACCAACCGGCTGGAGCT+TGG | + | 33362:9163-9182 | None:intergenic | 70.0% | |
| GGTTCGAGCCCAGAACCGGC+CGG | + | 33362:9183-9202 | None:intergenic | 70.0% | |
| ! | CGGTTGGTCCGGCCGGTTCT+GGG | - | 33362:9172-9191 | MS.gene063037:intron | 70.0% |
| !! | GGCCGGTTCTGGGCTCGAAC+CGG | - | 33362:9182-9201 | MS.gene063037:intron | 70.0% |
| AACCGGCCGGACCAACCGGC+TGG | + | 33362:9170-9189 | None:intergenic | 75.0% | |
| ! | CCGGTTGGTCCGGCCGGTTC+TGG | - | 33362:9171-9190 | MS.gene063037:intron | 75.0% |
| ! | CTCCAGCCGGTTGGTCCGGC+CGG | - | 33362:9165-9184 | MS.gene063037:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 33362 | gene | 8872 | 10649 | 8872 | ID=MS.gene063037 |
| 33362 | mRNA | 8872 | 10649 | 8872 | ID=MS.gene063037.t1;Parent=MS.gene063037 |
| 33362 | exon | 10589 | 10649 | 10589 | ID=MS.gene063037.t1.exon1;Parent=MS.gene063037.t1 |
| 33362 | CDS | 10589 | 10649 | 10589 | ID=cds.MS.gene063037.t1;Parent=MS.gene063037.t1 |
| 33362 | exon | 9825 | 10494 | 9825 | ID=MS.gene063037.t1.exon2;Parent=MS.gene063037.t1 |
| 33362 | CDS | 9825 | 10494 | 9825 | ID=cds.MS.gene063037.t1;Parent=MS.gene063037.t1 |
| 33362 | exon | 9069 | 9187 | 9069 | ID=MS.gene063037.t1.exon3;Parent=MS.gene063037.t1 |
| 33362 | CDS | 9069 | 9187 | 9069 | ID=cds.MS.gene063037.t1;Parent=MS.gene063037.t1 |
| 33362 | exon | 8872 | 8975 | 8872 | ID=MS.gene063037.t1.exon4;Parent=MS.gene063037.t1 |
| 33362 | CDS | 8872 | 8975 | 8872 | ID=cds.MS.gene063037.t1;Parent=MS.gene063037.t1 |
| Gene Sequence |
| Protein sequence |
