Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74328.t1 | XP_024638221.1 | 74.8 | 698 | 141 | 6 | 1 | 695 | 1 | 666 | 3.90E-156 | 562 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74328.t1 | G7JRR2 | 71.2 | 697 | 167 | 5 | 1 | 695 | 1 | 665 | 3.1e-139 | 505.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene74328 | 0.806187 | 9.29E-50 | -1.69E-46 |
| MS.gene049243 | MS.gene74328 | 0.813702 | 2.24E-51 | -1.69E-46 |
| MS.gene049251 | MS.gene74328 | 0.803163 | 3.97E-49 | -1.69E-46 |
| MS.gene049397 | MS.gene74328 | 0.85199 | 6.19E-61 | -1.69E-46 |
| MS.gene049596 | MS.gene74328 | 0.848233 | 6.98E-60 | -1.69E-46 |
| MS.gene049622 | MS.gene74328 | 0.823035 | 1.72E-53 | -1.69E-46 |
| MS.gene04985 | MS.gene74328 | 0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene049989 | MS.gene74328 | 0.915889 | 3.44E-85 | -1.69E-46 |
| MS.gene050297 | MS.gene74328 | 0.919775 | 2.95E-87 | -1.69E-46 |
| MS.gene050648 | MS.gene74328 | 0.81531 | 9.87E-52 | -1.69E-46 |
| MS.gene051094 | MS.gene74328 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene05124 | MS.gene74328 | 0.85435 | 1.31E-61 | -1.69E-46 |
| MS.gene051263 | MS.gene74328 | 0.845168 | 4.81E-59 | -1.69E-46 |
| MS.gene051629 | MS.gene74328 | 0.86443 | 1.22E-64 | -1.69E-46 |
| MS.gene051698 | MS.gene74328 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene051742 | MS.gene74328 | 0.873079 | 1.94E-67 | -1.69E-46 |
| MS.gene051816 | MS.gene74328 | 0.818611 | 1.79E-52 | -1.69E-46 |
| MS.gene051914 | MS.gene74328 | 0.808461 | 3.06E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene74328 | 0.867077 | 1.79E-65 | -1.69E-46 |
| MS.gene052143 | MS.gene74328 | 0.876495 | 1.33E-68 | -1.69E-46 |
| MS.gene052169 | MS.gene74328 | 0.8121 | 5.02E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene74328 | 0.860275 | 2.31E-63 | -1.69E-46 |
| MS.gene052367 | MS.gene74328 | 0.962607 | 4.44E-121 | -1.69E-46 |
| MS.gene052383 | MS.gene74328 | 0.805504 | 1.29E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene74328 | 0.879754 | 9.63E-70 | -1.69E-46 |
| MS.gene053348 | MS.gene74328 | 0.844736 | 6.28E-59 | -1.69E-46 |
| MS.gene053416 | MS.gene74328 | 0.898647 | 4.32E-77 | -1.69E-46 |
| MS.gene053417 | MS.gene74328 | 0.900523 | 6.73E-78 | -1.69E-46 |
| MS.gene05369 | MS.gene74328 | 0.869419 | 3.14E-66 | -1.69E-46 |
| MS.gene053929 | MS.gene74328 | 0.807689 | 4.47E-50 | -1.69E-46 |
| MS.gene054551 | MS.gene74328 | 0.877219 | 7.49E-69 | -1.69E-46 |
| MS.gene054593 | MS.gene74328 | 0.859593 | 3.71E-63 | -1.69E-46 |
| MS.gene054614 | MS.gene74328 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene054633 | MS.gene74328 | 0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene054643 | MS.gene74328 | 0.854293 | 1.36E-61 | -1.69E-46 |
| MS.gene054662 | MS.gene74328 | 0.825106 | 5.62E-54 | -1.69E-46 |
| MS.gene054885 | MS.gene74328 | 0.805274 | 1.44E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene74328 | 0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene74328 | 0.878693 | 2.28E-69 | -1.69E-46 |
| MS.gene055411 | MS.gene74328 | 0.818186 | 2.24E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene74328 | 0.886567 | 3.06E-72 | -1.69E-46 |
| MS.gene055579 | MS.gene74328 | 0.81813 | 2.30E-52 | -1.69E-46 |
| MS.gene055957 | MS.gene74328 | 0.890645 | 8.17E-74 | -1.69E-46 |
| MS.gene056041 | MS.gene74328 | 0.920761 | 8.49E-88 | -1.69E-46 |
| MS.gene056042 | MS.gene74328 | 0.837553 | 4.86E-57 | -1.69E-46 |
| MS.gene056266 | MS.gene74328 | -0.812911 | 3.34E-51 | -1.69E-46 |
| MS.gene05640 | MS.gene74328 | 0.866479 | 2.77E-65 | -1.69E-46 |
| MS.gene056526 | MS.gene74328 | 0.887255 | 1.67E-72 | -1.69E-46 |
| MS.gene056528 | MS.gene74328 | 0.826681 | 2.37E-54 | -1.69E-46 |
| MS.gene05732 | MS.gene74328 | 0.83143 | 1.68E-55 | -1.69E-46 |
| MS.gene057358 | MS.gene74328 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene057367 | MS.gene74328 | 0.836818 | 7.49E-57 | -1.69E-46 |
| MS.gene057458 | MS.gene74328 | 0.875704 | 2.50E-68 | -1.69E-46 |
| MS.gene057483 | MS.gene74328 | 0.841788 | 3.84E-58 | -1.69E-46 |
| MS.gene058196 | MS.gene74328 | 0.846033 | 2.80E-59 | -1.69E-46 |
| MS.gene058197 | MS.gene74328 | 0.843015 | 1.82E-58 | -1.69E-46 |
| MS.gene058198 | MS.gene74328 | 0.843653 | 1.23E-58 | -1.69E-46 |
| MS.gene058818 | MS.gene74328 | 0.853387 | 2.47E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene74328 | 0.853722 | 1.98E-61 | -1.69E-46 |
| MS.gene058828 | MS.gene74328 | 0.8233 | 1.49E-53 | -1.69E-46 |
| MS.gene058844 | MS.gene74328 | 0.819198 | 1.32E-52 | -1.69E-46 |
| MS.gene058849 | MS.gene74328 | 0.812537 | 4.03E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene74328 | 0.846892 | 1.63E-59 | -1.69E-46 |
| MS.gene059300 | MS.gene74328 | 0.858569 | 7.53E-63 | -1.69E-46 |
| MS.gene059553 | MS.gene74328 | 0.865072 | 7.70E-65 | -1.69E-46 |
| MS.gene060473 | MS.gene74328 | 0.930617 | 1.26E-93 | -1.69E-46 |
| MS.gene060565 | MS.gene74328 | 0.921147 | 5.20E-88 | -1.69E-46 |
| MS.gene06057 | MS.gene74328 | 0.892222 | 1.94E-74 | -1.69E-46 |
| MS.gene06093 | MS.gene74328 | 0.893541 | 5.71E-75 | -1.69E-46 |
| MS.gene060985 | MS.gene74328 | 0.808483 | 3.03E-50 | -1.69E-46 |
| MS.gene061099 | MS.gene74328 | 0.880224 | 6.55E-70 | -1.69E-46 |
| MS.gene061260 | MS.gene74328 | 0.925303 | 2.20E-90 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74328.t1 | MTR_4g077590 | 86.083 | 697 | 63 | 6 | 1 | 695 | 1 | 665 | 0.0 | 1120 |
| MS.gene74328.t1 | MTR_8g008690 | 87.179 | 39 | 5 | 0 | 1 | 39 | 1 | 39 | 1.26e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74328.t1 | AT3G03130 | 38.278 | 209 | 98 | 6 | 1 | 205 | 1 | 182 | 1.21e-24 | 108 |
| MS.gene74328.t1 | AT5G17160 | 32.653 | 245 | 95 | 5 | 1 | 224 | 1 | 196 | 5.80e-20 | 94.7 |
Find 149 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCTGAACCCTCTTCTTT+TGG | 0.230668 | 4.4:-33384277 | None:intergenic |
| TTCAGAAACATCATCATTCT+TGG | 0.233698 | 4.4:-33383947 | None:intergenic |
| TTCTGCTGAAATTGAAAATA+AGG | 0.284898 | 4.4:+33384537 | MS.gene74328:CDS |
| CACTCTACCTTCTCTGGTTC+AGG | 0.287240 | 4.4:-33384997 | None:intergenic |
| ACATTCAAAGGGGCAATAAC+TGG | 0.287312 | 4.4:-33384784 | None:intergenic |
| TCTTCTCCACTCCCTGCATT+TGG | 0.315762 | 4.4:-33385551 | None:intergenic |
| AGCAGGAATCTTGTTCATCT+TGG | 0.352822 | 4.4:-33382934 | None:intergenic |
| GAAAGCCAGTCACATGATTC+TGG | 0.357776 | 4.4:+33384208 | MS.gene74328:CDS |
| GGCATCTGAAGAAGCTTATA+AGG | 0.358283 | 4.4:+33384750 | MS.gene74328:CDS |
| AGGAACTGCTTGAATTTCAT+TGG | 0.368042 | 4.4:-33385382 | None:intergenic |
| TGCATGTTCCTCAGATTCAT+TGG | 0.375527 | 4.4:-33385226 | None:intergenic |
| CTGTCTTGCAGATTTAAACT+TGG | 0.380530 | 4.4:-33384331 | None:intergenic |
| GAAGGATACTTCTGAGAAAC+AGG | 0.383185 | 4.4:+33385188 | MS.gene74328:CDS |
| GAGACTGCTGTGGTGCCTAA+TGG | 0.385052 | 4.4:+33384919 | MS.gene74328:CDS |
| ATTGAAAATAAGGAATGCTT+TGG | 0.386548 | 4.4:+33384547 | MS.gene74328:CDS |
| GGCTCAATTGAGACTGAAAA+TGG | 0.387995 | 4.4:+33383997 | MS.gene74328:CDS |
| CACCAGGAGGTCCGTGAGAT+TGG | 0.391312 | 4.4:+33383870 | MS.gene74328:CDS |
| CCAACATCACCACCTTCCTT+TGG | 0.392508 | 4.4:-33383448 | None:intergenic |
| GTTCCTAACCAATATGTTGC+TGG | 0.400916 | 4.4:+33384715 | MS.gene74328:CDS |
| GAGCTTGTCAAAGATGAGTT+TGG | 0.403289 | 4.4:+33383900 | MS.gene74328:CDS |
| TGATGCAGAGGATGTGTTGC+AGG | 0.411045 | 4.4:+33384249 | MS.gene74328:CDS |
| GATACACACTCTACCTTCTC+TGG | 0.413375 | 4.4:-33385003 | None:intergenic |
| ATCTCTTCAGAAGACTCTTC+AGG | 0.414400 | 4.4:-33384874 | None:intergenic |
| ACTAGCTTTCTGAAAATCAA+TGG | 0.418698 | 4.4:-33385457 | None:intergenic |
| AGGATCTGAGCAGCCTGAAC+AGG | 0.426452 | 4.4:+33384501 | MS.gene74328:intron |
| GAAAGAAGCTGAAAGCTCTA+AGG | 0.427642 | 4.4:+33383528 | MS.gene74328:CDS |
| ATGGTTTCTGAGCAGATAAA+TGG | 0.429962 | 4.4:+33385318 | MS.gene74328:CDS |
| GAGACAAGCCAGCAACATAT+TGG | 0.433679 | 4.4:-33384723 | None:intergenic |
| CCAGTACCACTCTCAATACT+AGG | 0.435481 | 4.4:-33385402 | None:intergenic |
| TTCTGACTGAGCTGGGCAAA+GGG | 0.438060 | 4.4:-33385346 | None:intergenic |
| ACATCCACAAAAGCATCTTC+AGG | 0.439980 | 4.4:-33384694 | None:intergenic |
| GAGCTTTCAGCTTCTTTCAC+CGG | 0.458995 | 4.4:-33383523 | None:intergenic |
| CCTAGTATTGAGAGTGGTAC+TGG | 0.465761 | 4.4:+33385402 | MS.gene74328:CDS |
| TGGTACCTGATGATGCTTGT+GGG | 0.466839 | 4.4:+33384809 | MS.gene74328:CDS |
| GATGGAACTTCTGGTGACTC+TGG | 0.468489 | 4.4:+33385048 | MS.gene74328:CDS |
| AACTAGTGATATAGAGTCAA+TGG | 0.475796 | 4.4:+33385299 | MS.gene74328:CDS |
| CCCAGCTCAGTCAGAAATCA+AGG | 0.476348 | 4.4:+33385353 | MS.gene74328:CDS |
| TCCTTGATTTCTGACTGAGC+TGG | 0.477329 | 4.4:-33385354 | None:intergenic |
| GAAGGTAGAGTGTGTATCTT+CGG | 0.478549 | 4.4:+33385008 | MS.gene74328:CDS |
| TAAGAATGAGGTTCAAGAAA+AGG | 0.483344 | 4.4:+33383732 | MS.gene74328:CDS |
| CAAGAGCTAGTCGTTCGGTT+CGG | 0.485521 | 4.4:+33383800 | MS.gene74328:CDS |
| CTGCTGTTGGTAGTAGGAGA+AGG | 0.486707 | 4.4:+33383644 | MS.gene74328:CDS |
| CTGATTGTAGGTTGAAGGAT+TGG | 0.490967 | 4.4:+33383411 | MS.gene74328:intron |
| CAGTCAAAGAAGCAATAGTT+TGG | 0.491962 | 4.4:-33384663 | None:intergenic |
| CAGACATATCAGCAACATCT+TGG | 0.492555 | 4.4:-33384843 | None:intergenic |
| AGCACTGCCACAGAATCAAC+TGG | 0.493549 | 4.4:+33385590 | MS.gene74328:CDS |
| CACCAATCTCACGGACCTCC+TGG | 0.499335 | 4.4:-33383872 | None:intergenic |
| TTAGGCACCACAGCAGTCTC+AGG | 0.501559 | 4.4:-33384916 | None:intergenic |
| ATGAGTGTCTCCCAGAATGA+AGG | 0.502489 | 4.4:+33383973 | MS.gene74328:CDS |
| TTGAACTGATTGTAGGTTGA+AGG | 0.505205 | 4.4:+33383406 | MS.gene74328:intron |
| GCAACATTGGTGATATTAGC+AGG | 0.506497 | 4.4:-33382951 | None:intergenic |
| TTTGCGGGTTCTCAAGAAGT+TGG | 0.506912 | 4.4:+33385479 | MS.gene74328:CDS |
| GTAGTTCTACGAGCTGTTCG+TGG | 0.507076 | 4.4:-33383487 | None:intergenic |
| TTTCTGACTGAGCTGGGCAA+AGG | 0.508078 | 4.4:-33385347 | None:intergenic |
| CAGGTACCACAACATTCAAA+GGG | 0.510126 | 4.4:-33384795 | None:intergenic |
| AAGCCAGCAACATATTGGTT+AGG | 0.510165 | 4.4:-33384718 | None:intergenic |
| TCATCCCCACAAGCATCATC+AGG | 0.511382 | 4.4:-33384814 | None:intergenic |
| AGCGTCAGCCATGGCAACAT+TGG | 0.512064 | 4.4:-33382964 | None:intergenic |
| TGCGCTGATTCAAATGAAGC+AGG | 0.514107 | 4.4:+33384364 | MS.gene74328:CDS |
| TGTCTTGCAGATTTAAACTT+GGG | 0.515264 | 4.4:-33384330 | None:intergenic |
| AGGGTTAGCCGTGGTGGTAG+AGG | 0.519152 | 4.4:+33383559 | MS.gene74328:CDS |
| CCAAAGGAAGGTGGTGATGT+TGG | 0.519158 | 4.4:+33383448 | MS.gene74328:CDS |
| TGCAGAAGGCATACAGCACC+AGG | 0.521391 | 4.4:+33383854 | MS.gene74328:CDS |
| CAGGAGGTCCGTGAGATTGG+TGG | 0.523155 | 4.4:+33383873 | MS.gene74328:CDS |
| TATTGCCCCTTTGAATGTTG+TGG | 0.523826 | 4.4:+33384789 | MS.gene74328:CDS |
| GGTAGAGGCGGAGTTGCTGA+AGG | 0.524777 | 4.4:+33383574 | MS.gene74328:CDS |
| AACTACGTCTCAAAGGAAAC+CGG | 0.525787 | 4.4:+33383504 | MS.gene74328:CDS |
| CCTTGATTTCTGACTGAGCT+GGG | 0.528460 | 4.4:-33385353 | None:intergenic |
| AAAGAAAGAAGAAGATCAGA+AGG | 0.530077 | 4.4:+33385170 | MS.gene74328:CDS |
| AGGAGGTCCGTGAGATTGGT+GGG | 0.530257 | 4.4:+33383874 | MS.gene74328:CDS |
| CATTCTACAACTCTCAATGT+TGG | 0.532664 | 4.4:+33385137 | MS.gene74328:CDS |
| ATGTGACTGGCTTTCACAGT+CGG | 0.537942 | 4.4:-33384200 | None:intergenic |
| TGTTGCTGGCTTGTCTCTTG+AGG | 0.538706 | 4.4:+33384729 | MS.gene74328:CDS |
| TTCTCAGAACACTGATGAAG+TGG | 0.539221 | 4.4:+33384156 | MS.gene74328:CDS |
| TCAGGTACCACAACATTCAA+AGG | 0.540020 | 4.4:-33384796 | None:intergenic |
| TGCTGTTGGTAGTAGGAGAA+GGG | 0.540948 | 4.4:+33383645 | MS.gene74328:CDS |
| AGCTGAGAGAGCGTCAGCCA+TGG | 0.542842 | 4.4:-33382973 | None:intergenic |
| GTACTCCTGCTGTTGGTAGT+AGG | 0.544663 | 4.4:+33383638 | MS.gene74328:CDS |
| TGGCAATCCTAATACGATGA+AGG | 0.546509 | 4.4:+33385422 | MS.gene74328:CDS |
| GCTGTTCGTGGTTGAACAGC+TGG | 0.547146 | 4.4:-33383475 | None:intergenic |
| TGATGAAACTTCAGTGCAGA+AGG | 0.548635 | 4.4:+33383840 | MS.gene74328:CDS |
| GAAGTCTCTATAGATCCATT+AGG | 0.551542 | 4.4:-33384934 | None:intergenic |
| CTCGTAGAACTACGTCTCAA+AGG | 0.551802 | 4.4:+33383497 | MS.gene74328:CDS |
| ATGCAGCAATCTCCATAGCT+TGG | 0.554047 | 4.4:-33384582 | None:intergenic |
| AGTTTCTACTCGCAGAAAGA+AGG | 0.556570 | 4.4:+33383675 | MS.gene74328:CDS |
| TGAGTGTCTCCCAGAATGAA+GGG | 0.557369 | 4.4:+33383974 | MS.gene74328:CDS |
| CATTCAAAGGGGCAATAACT+GGG | 0.557703 | 4.4:-33384783 | None:intergenic |
| TAATGATGATGTCCAAATGC+AGG | 0.563195 | 4.4:+33385539 | MS.gene74328:CDS |
| TACTCAGCCAGTTGATTCTG+TGG | 0.563934 | 4.4:-33385597 | None:intergenic |
| GTTGGTGAAGGAGAAGTTAG+CGG | 0.565443 | 4.4:+33385497 | MS.gene74328:CDS |
| GCTCTTTACGTGAGAGAGTG+TGG | 0.574355 | 4.4:-33382899 | None:intergenic |
| CTGAACCAGAATCATGTGAC+TGG | 0.574401 | 4.4:-33384213 | None:intergenic |
| GTTTGGTCAGCAATCTCCAC+AGG | 0.574780 | 4.4:-33384646 | None:intergenic |
| GGAGATTGCTGCATCTGAAG+AGG | 0.576864 | 4.4:+33384591 | MS.gene74328:CDS |
| ATTTGAACCTGAACCAGAGA+AGG | 0.582000 | 4.4:+33384990 | MS.gene74328:CDS |
| CTAGCTCTTGTCCTACTGCT+AGG | 0.582951 | 4.4:-33383787 | None:intergenic |
| AGAGGTTGTCAATGATGTGG+AGG | 0.583619 | 4.4:+33384294 | MS.gene74328:CDS |
| TAGAGGCGGAGTTGCTGAAG+GGG | 0.583738 | 4.4:+33383576 | MS.gene74328:CDS |
| CTTGTCAAAGATGAGTTTGG+CGG | 0.585321 | 4.4:+33383903 | MS.gene74328:CDS |
| TAGGACAAGAGCTAGTCGTT+CGG | 0.587545 | 4.4:+33383795 | MS.gene74328:CDS |
| AGCTGAGCAAGACCAAGCTA+TGG | 0.590087 | 4.4:+33384570 | MS.gene74328:CDS |
| GTTAGCCGTGGTGGTAGAGG+CGG | 0.590505 | 4.4:+33383562 | MS.gene74328:CDS |
| AAAGCTCTAAGGTTTCTACA+AGG | 0.590674 | 4.4:+33383539 | MS.gene74328:CDS |
| TTCAGAGGTTGTCAATGATG+TGG | 0.593177 | 4.4:+33384291 | MS.gene74328:CDS |
| TCTACAAGGGTTAGCCGTGG+TGG | 0.595736 | 4.4:+33383553 | MS.gene74328:CDS |
| AAAGATGCTAATGTAGCTGC+CGG | 0.596201 | 4.4:+33383616 | MS.gene74328:CDS |
| TTTGGCGGACACTGAGGACA+CGG | 0.596803 | 4.4:+33383918 | MS.gene74328:CDS |
| ACTACCAACAGCAGGAGTAC+CGG | 0.597108 | 4.4:-33383635 | None:intergenic |
| CTGCTGTAGCTCCTAGCAGT+AGG | 0.598663 | 4.4:+33383776 | MS.gene74328:CDS |
| GCAGGCTGAACCAAAAGAAG+AGG | 0.598862 | 4.4:+33384267 | MS.gene74328:CDS |
| GTAGAGGCGGAGTTGCTGAA+GGG | 0.599107 | 4.4:+33383575 | MS.gene74328:CDS |
| GCTCTTCCCCACCAATCTCA+CGG | 0.601608 | 4.4:-33383881 | None:intergenic |
| AGTGAAATCAACTGATGCAG+AGG | 0.603053 | 4.4:+33384237 | MS.gene74328:CDS |
| TAATATCACCAATGTTGCCA+TGG | 0.610959 | 4.4:+33382956 | MS.gene74328:CDS |
| TGATGTCCAAATGCAGGGAG+TGG | 0.611592 | 4.4:+33385545 | MS.gene74328:CDS |
| TCAAGAAAAGGCTATGAATG+TGG | 0.615906 | 4.4:+33383744 | MS.gene74328:CDS |
| TTTCTGCGAGTAGAAACTGC+AGG | 0.617291 | 4.4:-33383670 | None:intergenic |
| CTTCTCCTACTACCAACAGC+AGG | 0.618516 | 4.4:-33383643 | None:intergenic |
| AAGCTCTAAGGTTTCTACAA+GGG | 0.623138 | 4.4:+33383540 | MS.gene74328:CDS |
| ACAGTCGGCTTTGTTTAGAG+AGG | 0.625691 | 4.4:-33384185 | None:intergenic |
| TGCATCTGAAGAGGTTTCTG+TGG | 0.629076 | 4.4:+33384600 | MS.gene74328:CDS |
| GTGGTACCTGATGATGCTTG+TGG | 0.629889 | 4.4:+33384808 | MS.gene74328:CDS |
| CTACTGCTAGGAGCTACAGC+AGG | 0.631861 | 4.4:-33383775 | None:intergenic |
| GGAGATTGCTGCATCAGAAG+AGG | 0.632413 | 4.4:+33384621 | MS.gene74328:CDS |
| TGACTCTGGAGCTGAAAATG+AGG | 0.632609 | 4.4:+33385062 | MS.gene74328:CDS |
| ACCAAAAGAAGAGGGTTCAG+AGG | 0.638218 | 4.4:+33384276 | MS.gene74328:CDS |
| ATCTATAGAGACTTCTTCAG+AGG | 0.639665 | 4.4:+33384942 | MS.gene74328:CDS |
| AGAAGACACTGAGTTTGATG+AGG | 0.640026 | 4.4:+33385254 | MS.gene74328:CDS |
| GGTTCTCAAGAAGTTGGTGA+AGG | 0.640400 | 4.4:+33385485 | MS.gene74328:CDS |
| AGCACAAACCAATGAATCTG+AGG | 0.641528 | 4.4:+33385218 | MS.gene74328:CDS |
| CAGGCTGAACCAAAAGAAGA+GGG | 0.643045 | 4.4:+33384268 | MS.gene74328:CDS |
| GCTGCCGGTACTCCTGCTGT+TGG | 0.646328 | 4.4:+33383631 | MS.gene74328:CDS |
| TGATGTGGAGGTTTCACATG+AGG | 0.650771 | 4.4:+33384306 | MS.gene74328:CDS |
| GAGTGTCTCCCAGAATGAAG+GGG | 0.652351 | 4.4:+33383975 | MS.gene74328:CDS |
| GGAGGTCCGTGAGATTGGTG+GGG | 0.652841 | 4.4:+33383875 | MS.gene74328:CDS |
| GGTACCTGATGATGCTTGTG+GGG | 0.662615 | 4.4:+33384810 | MS.gene74328:CDS |
| TTCGCAGACAGAATCAAATG+TGG | 0.665529 | 4.4:+33384132 | MS.gene74328:CDS |
| TATTGCTCCTGAGACTGCTG+TGG | 0.667509 | 4.4:+33384909 | MS.gene74328:CDS |
| TGCATCAGAAGAGGTTCCTG+TGG | 0.672037 | 4.4:+33384630 | MS.gene74328:CDS |
| GCAGTTCCTAGTATTGAGAG+TGG | 0.672883 | 4.4:+33385396 | MS.gene74328:CDS |
| AATGATGATGTCCAAATGCA+GGG | 0.674488 | 4.4:+33385540 | MS.gene74328:CDS |
| TCTGACTGAGCTGGGCAAAG+GGG | 0.676525 | 4.4:-33385345 | None:intergenic |
| GTTTCTACAAGGGTTAGCCG+TGG | 0.679018 | 4.4:+33383550 | MS.gene74328:CDS |
| GATGAGTTTGGCGGACACTG+AGG | 0.679917 | 4.4:+33383912 | MS.gene74328:CDS |
| TGATGATGTTGATAAGAATG+AGG | 0.682068 | 4.4:+33383720 | MS.gene74328:CDS |
| AGTGTCTCCCAGAATGAAGG+GGG | 0.688959 | 4.4:+33383976 | MS.gene74328:CDS |
| AGGTACCACAACATTCAAAG+GGG | 0.740202 | 4.4:-33384794 | None:intergenic |
| CAACTCCGCCTCTACCACCA+CGG | 0.745976 | 4.4:-33383567 | None:intergenic |
| AGAAGGCATACAGCACCAGG+AGG | 0.747195 | 4.4:+33383857 | MS.gene74328:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGTTCTTTATTTTTTAATT+TGG | + | chr4.4:33383035-33383054 | MS.gene74328:intron | 15.0% |
| !! | TTTCGTTAGATTTGTAAAAT+TGG | + | chr4.4:33383341-33383360 | MS.gene74328:intron | 20.0% |
| ! | AACTGAACTAAATCAAGAAA+TGG | - | chr4.4:33383020-33383039 | None:intergenic | 25.0% |
| ! | ACAATACAATACAGTTTCAA+TGG | - | chr4.4:33383274-33383293 | None:intergenic | 25.0% |
| ! | ATTGAAAATAAGGAATGCTT+TGG | + | chr4.4:33384547-33384566 | MS.gene74328:CDS | 25.0% |
| ! | TGAAGTATATTAAGTCGATT+AGG | + | chr4.4:33383140-33383159 | MS.gene74328:intron | 25.0% |
| ! | TTCTGCTGAAATTGAAAATA+AGG | + | chr4.4:33384537-33384556 | MS.gene74328:CDS | 25.0% |
| ! | TTTACAAATCTAACGAAACA+TGG | - | chr4.4:33383339-33383358 | None:intergenic | 25.0% |
| !! | CGATTAGGTTTTTCATTTTA+GGG | + | chr4.4:33383155-33383174 | MS.gene74328:intron | 25.0% |
| !! | GATTAGGTTTTTCATTTTAG+GGG | + | chr4.4:33383156-33383175 | MS.gene74328:intron | 25.0% |
| !! | TCGATTAGGTTTTTCATTTT+AGG | + | chr4.4:33383154-33383173 | MS.gene74328:intron | 25.0% |
| !! | TTGATTTTTATGATCTTGAC+TGG | + | chr4.4:33383194-33383213 | MS.gene74328:intron | 25.0% |
| !!! | ATTTGATTTGAACTGATTGT+AGG | + | chr4.4:33383399-33383418 | MS.gene74328:intron | 25.0% |
| AAAGAAAGAAGAAGATCAGA+AGG | + | chr4.4:33385170-33385189 | MS.gene74328:CDS | 30.0% | |
| AACTAGTGATATAGAGTCAA+TGG | + | chr4.4:33385299-33385318 | MS.gene74328:CDS | 30.0% | |
| AATGGAGAAAGATTTACATG+AGG | - | chr4.4:33383002-33383021 | None:intergenic | 30.0% | |
| GAAGACAAAAAAGAAAGCAA+CGG | + | chr4.4:33385102-33385121 | MS.gene74328:CDS | 30.0% | |
| TAAGAATGAGGTTCAAGAAA+AGG | + | chr4.4:33383732-33383751 | MS.gene74328:CDS | 30.0% | |
| TGTCTTGCAGATTTAAACTT+GGG | - | chr4.4:33384333-33384352 | None:intergenic | 30.0% | |
| TTCAGAAACATCATCATTCT+TGG | - | chr4.4:33383950-33383969 | None:intergenic | 30.0% | |
| ! | CTTGATGTTGATCATTTTAC+AGG | + | chr4.4:33384481-33384500 | MS.gene74328:intron | 30.0% |
| ! | GAAATTTTGAATCCAAAGGA+AGG | + | chr4.4:33383436-33383455 | MS.gene74328:CDS | 30.0% |
| ! | GCTATTCTAGTTGAAAAAGA+TGG | + | chr4.4:33385030-33385049 | MS.gene74328:CDS | 30.0% |
| ! | GGATGAAATTTTGAATCCAA+AGG | + | chr4.4:33383432-33383451 | MS.gene74328:CDS | 30.0% |
| ! | TGATGATGTTGATAAGAATG+AGG | + | chr4.4:33383720-33383739 | MS.gene74328:CDS | 30.0% |
| ! | TTTTATGATCTTGACTGGAT+TGG | + | chr4.4:33383199-33383218 | MS.gene74328:intron | 30.0% |
| !! | ACTAGCTTTCTGAAAATCAA+TGG | - | chr4.4:33385460-33385479 | None:intergenic | 30.0% |
| !! | ATTTTCAGAAAGCTAGTTTG+CGG | + | chr4.4:33385463-33385482 | MS.gene74328:CDS | 30.0% |
| !!! | CTTTTTTGTCTTCAAAGGAT+TGG | - | chr4.4:33385095-33385114 | None:intergenic | 30.0% |
| !!! | GCTTTCTTTTTTGTCTTCAA+AGG | - | chr4.4:33385100-33385119 | None:intergenic | 30.0% |
| !!! | TTTGTTTTGCAATATGCTTG+TGG | + | chr4.4:33384387-33384406 | MS.gene74328:intron | 30.0% |
| AGGAACTGCTTGAATTTCAT+TGG | - | chr4.4:33385385-33385404 | None:intergenic | 35.0% | |
| ATCTATAGAGACTTCTTCAG+AGG | + | chr4.4:33384942-33384961 | MS.gene74328:CDS | 35.0% | |
| ATGGTTTCTGAGCAGATAAA+TGG | + | chr4.4:33385318-33385337 | MS.gene74328:CDS | 35.0% | |
| CAGTCAAAGAAGCAATAGTT+TGG | - | chr4.4:33384666-33384685 | None:intergenic | 35.0% | |
| CATTCTACAACTCTCAATGT+TGG | + | chr4.4:33385137-33385156 | MS.gene74328:CDS | 35.0% | |
| CTGTCTTGCAGATTTAAACT+TGG | - | chr4.4:33384334-33384353 | None:intergenic | 35.0% | |
| GAAGTCTCTATAGATCCATT+AGG | - | chr4.4:33384937-33384956 | None:intergenic | 35.0% | |
| GTTGAAAAAGATGGAACTTC+TGG | + | chr4.4:33385039-33385058 | MS.gene74328:CDS | 35.0% | |
| TAATATCACCAATGTTGCCA+TGG | + | chr4.4:33382956-33382975 | MS.gene74328:CDS | 35.0% | |
| TCAAGAAAAGGCTATGAATG+TGG | + | chr4.4:33383744-33383763 | MS.gene74328:CDS | 35.0% | |
| ! | AATGATGATGTCCAAATGCA+GGG | + | chr4.4:33385540-33385559 | MS.gene74328:CDS | 35.0% |
| ! | ATTTTGAATCCAAAGGAAGG+TGG | + | chr4.4:33383439-33383458 | MS.gene74328:CDS | 35.0% |
| ! | GAGTTTTCCTTCATCGTATT+AGG | - | chr4.4:33385432-33385451 | None:intergenic | 35.0% |
| ! | TAATGATGATGTCCAAATGC+AGG | + | chr4.4:33385539-33385558 | MS.gene74328:CDS | 35.0% |
| ! | TTGAACTGATTGTAGGTTGA+AGG | + | chr4.4:33383406-33383425 | MS.gene74328:intron | 35.0% |
| !! | AAAGCTCTAAGGTTTCTACA+AGG | + | chr4.4:33383539-33383558 | MS.gene74328:CDS | 35.0% |
| !! | AAGCTCTAAGGTTTCTACAA+GGG | + | chr4.4:33383540-33383559 | MS.gene74328:CDS | 35.0% |
| !! | CATTTTAGGGGTTTTCAGTT+CGG | + | chr4.4:33383168-33383187 | MS.gene74328:intron | 35.0% |
| !! | TTTTCAGAAAGCTAGTTTGC+GGG | + | chr4.4:33385464-33385483 | MS.gene74328:CDS | 35.0% |
| AAAGATGCTAATGTAGCTGC+CGG | + | chr4.4:33383616-33383635 | MS.gene74328:CDS | 40.0% | |
| AACTACGTCTCAAAGGAAAC+CGG | + | chr4.4:33383504-33383523 | MS.gene74328:CDS | 40.0% | |
| ACATTCAAAGGGGCAATAAC+TGG | - | chr4.4:33384787-33384806 | None:intergenic | 40.0% | |
| AGAAGACACTGAGTTTGATG+AGG | + | chr4.4:33385254-33385273 | MS.gene74328:CDS | 40.0% | |
| AGCACAAACCAATGAATCTG+AGG | + | chr4.4:33385218-33385237 | MS.gene74328:CDS | 40.0% | |
| AGCAGGAATCTTGTTCATCT+TGG | - | chr4.4:33382937-33382956 | None:intergenic | 40.0% | |
| AGGTACCACAACATTCAAAG+GGG | - | chr4.4:33384797-33384816 | None:intergenic | 40.0% | |
| AGTGAAATCAACTGATGCAG+AGG | + | chr4.4:33384237-33384256 | MS.gene74328:CDS | 40.0% | |
| AGTTTCTACTCGCAGAAAGA+AGG | + | chr4.4:33383675-33383694 | MS.gene74328:CDS | 40.0% | |
| ATCTCTTCAGAAGACTCTTC+AGG | - | chr4.4:33384877-33384896 | None:intergenic | 40.0% | |
| ATTTGAACCTGAACCAGAGA+AGG | + | chr4.4:33384990-33385009 | MS.gene74328:CDS | 40.0% | |
| CAGACATATCAGCAACATCT+TGG | - | chr4.4:33384846-33384865 | None:intergenic | 40.0% | |
| CAGGTACCACAACATTCAAA+GGG | - | chr4.4:33384798-33384817 | None:intergenic | 40.0% | |
| CATTCAAAGGGGCAATAACT+GGG | - | chr4.4:33384786-33384805 | None:intergenic | 40.0% | |
| CTTGTCAAAGATGAGTTTGG+CGG | + | chr4.4:33383903-33383922 | MS.gene74328:CDS | 40.0% | |
| GAAAGAAGCTGAAAGCTCTA+AGG | + | chr4.4:33383528-33383547 | MS.gene74328:CDS | 40.0% | |
| GAAGGTAGAGTGTGTATCTT+CGG | + | chr4.4:33385008-33385027 | MS.gene74328:CDS | 40.0% | |
| GAGCTTGTCAAAGATGAGTT+TGG | + | chr4.4:33383900-33383919 | MS.gene74328:CDS | 40.0% | |
| GGCATCTGAAGAAGCTTATA+AGG | + | chr4.4:33384750-33384769 | MS.gene74328:CDS | 40.0% | |
| GGCTCAATTGAGACTGAAAA+TGG | + | chr4.4:33383997-33384016 | MS.gene74328:CDS | 40.0% | |
| GTTCCTAACCAATATGTTGC+TGG | + | chr4.4:33384715-33384734 | MS.gene74328:CDS | 40.0% | |
| TATTGCCCCTTTGAATGTTG+TGG | + | chr4.4:33384789-33384808 | MS.gene74328:CDS | 40.0% | |
| TCAGGTACCACAACATTCAA+AGG | - | chr4.4:33384799-33384818 | None:intergenic | 40.0% | |
| TGATGAAACTTCAGTGCAGA+AGG | + | chr4.4:33383840-33383859 | MS.gene74328:CDS | 40.0% | |
| TGCATGTTCCTCAGATTCAT+TGG | - | chr4.4:33385229-33385248 | None:intergenic | 40.0% | |
| TGGCAATCCTAATACGATGA+AGG | + | chr4.4:33385422-33385441 | MS.gene74328:CDS | 40.0% | |
| TTCAGAGGTTGTCAATGATG+TGG | + | chr4.4:33384291-33384310 | MS.gene74328:CDS | 40.0% | |
| TTCGCAGACAGAATCAAATG+TGG | + | chr4.4:33384132-33384151 | MS.gene74328:CDS | 40.0% | |
| TTCTCAGAACACTGATGAAG+TGG | + | chr4.4:33384156-33384175 | MS.gene74328:CDS | 40.0% | |
| ! | AAGCCAGCAACATATTGGTT+AGG | - | chr4.4:33384721-33384740 | None:intergenic | 40.0% |
| ! | CTGATTGTAGGTTGAAGGAT+TGG | + | chr4.4:33383411-33383430 | MS.gene74328:intron | 40.0% |
| ! | GAAGGATACTTCTGAGAAAC+AGG | + | chr4.4:33385188-33385207 | MS.gene74328:CDS | 40.0% |
| ! | GCAACATTGGTGATATTAGC+AGG | - | chr4.4:33382954-33382973 | None:intergenic | 40.0% |
| ! | TCACAAGTTTTCTCCTGTTC+AGG | - | chr4.4:33384517-33384536 | None:intergenic | 40.0% |
| ! | TGAACCTGAAGATGCTTTTG+TGG | + | chr4.4:33384690-33384709 | MS.gene74328:CDS | 40.0% |
| !! | ACATCCACAAAAGCATCTTC+AGG | - | chr4.4:33384697-33384716 | None:intergenic | 40.0% |
| AATTGAGCCCCCTTCATTCT+GGG | - | chr4.4:33383986-33384005 | None:intergenic | 45.0% | |
| ACCAAAAGAAGAGGGTTCAG+AGG | + | chr4.4:33384276-33384295 | MS.gene74328:CDS | 45.0% | |
| AGAGGTTGTCAATGATGTGG+AGG | + | chr4.4:33384294-33384313 | MS.gene74328:CDS | 45.0% | |
| ATGAGTGTCTCCCAGAATGA+AGG | + | chr4.4:33383973-33383992 | MS.gene74328:CDS | 45.0% | |
| ATGCAGCAATCTCCATAGCT+TGG | - | chr4.4:33384585-33384604 | None:intergenic | 45.0% | |
| CAGGCTGAACCAAAAGAAGA+GGG | + | chr4.4:33384268-33384287 | MS.gene74328:CDS | 45.0% | |
| CCAGTACCACTCTCAATACT+AGG | - | chr4.4:33385405-33385424 | None:intergenic | 45.0% | |
| CCTTGATTTCTGACTGAGCT+GGG | - | chr4.4:33385356-33385375 | None:intergenic | 45.0% | |
| CTCGTAGAACTACGTCTCAA+AGG | + | chr4.4:33383497-33383516 | MS.gene74328:CDS | 45.0% | |
| CTGAACCAGAATCATGTGAC+TGG | - | chr4.4:33384216-33384235 | None:intergenic | 45.0% | |
| GAAAGCCAGTCACATGATTC+TGG | + | chr4.4:33384208-33384227 | MS.gene74328:CDS | 45.0% | |
| GAGACAAGCCAGCAACATAT+TGG | - | chr4.4:33384726-33384745 | None:intergenic | 45.0% | |
| GAGCTTTCAGCTTCTTTCAC+CGG | - | chr4.4:33383526-33383545 | None:intergenic | 45.0% | |
| GATACACACTCTACCTTCTC+TGG | - | chr4.4:33385006-33385025 | None:intergenic | 45.0% | |
| TAGGACAAGAGCTAGTCGTT+CGG | + | chr4.4:33383795-33383814 | MS.gene74328:CDS | 45.0% | |
| TCCTTGATTTCTGACTGAGC+TGG | - | chr4.4:33385357-33385376 | None:intergenic | 45.0% | |
| TGAGTGTCTCCCAGAATGAA+GGG | + | chr4.4:33383974-33383993 | MS.gene74328:CDS | 45.0% | |
| TGATGTGGAGGTTTCACATG+AGG | + | chr4.4:33384306-33384325 | MS.gene74328:CDS | 45.0% | |
| TGCATCTGAAGAGGTTTCTG+TGG | + | chr4.4:33384600-33384619 | MS.gene74328:CDS | 45.0% | |
| TTTCTGCGAGTAGAAACTGC+AGG | - | chr4.4:33383673-33383692 | None:intergenic | 45.0% | |
| TTTGCGGGTTCTCAAGAAGT+TGG | + | chr4.4:33385479-33385498 | MS.gene74328:CDS | 45.0% | |
| ! | ACCTCTGAACCCTCTTCTTT+TGG | - | chr4.4:33384280-33384299 | None:intergenic | 45.0% |
| ! | CCTAGTATTGAGAGTGGTAC+TGG | + | chr4.4:33385402-33385421 | MS.gene74328:CDS | 45.0% |
| ! | GCAGTTCCTAGTATTGAGAG+TGG | + | chr4.4:33385396-33385415 | MS.gene74328:CDS | 45.0% |
| ! | GTTGGTGAAGGAGAAGTTAG+CGG | + | chr4.4:33385497-33385516 | MS.gene74328:CDS | 45.0% |
| ! | TGGTACCTGATGATGCTTGT+GGG | + | chr4.4:33384809-33384828 | MS.gene74328:CDS | 45.0% |
| !! | ACAGTCGGCTTTGTTTAGAG+AGG | - | chr4.4:33384188-33384207 | None:intergenic | 45.0% |
| !! | ATGTGACTGGCTTTCACAGT+CGG | - | chr4.4:33384203-33384222 | None:intergenic | 45.0% |
| !! | GGTTCTCAAGAAGTTGGTGA+AGG | + | chr4.4:33385485-33385504 | MS.gene74328:CDS | 45.0% |
| !! | TGACTCTGGAGCTGAAAATG+AGG | + | chr4.4:33385062-33385081 | MS.gene74328:CDS | 45.0% |
| !! | TGCGCTGATTCAAATGAAGC+AGG | + | chr4.4:33384364-33384383 | MS.gene74328:CDS | 45.0% |
| !! | TGCTGTTGGTAGTAGGAGAA+GGG | + | chr4.4:33383645-33383664 | MS.gene74328:CDS | 45.0% |
| AGCACTGCCACAGAATCAAC+TGG | + | chr4.4:33385590-33385609 | MS.gene74328:CDS | 50.0% | |
| AGCTGAGCAAGACCAAGCTA+TGG | + | chr4.4:33384570-33384589 | MS.gene74328:CDS | 50.0% | |
| AGTGTCTCCCAGAATGAAGG+GGG | + | chr4.4:33383976-33383995 | MS.gene74328:CDS | 50.0% | |
| CAAGAGCTAGTCGTTCGGTT+CGG | + | chr4.4:33383800-33383819 | MS.gene74328:CDS | 50.0% | |
| CAATTGAGCCCCCTTCATTC+TGG | - | chr4.4:33383987-33384006 | None:intergenic | 50.0% | |
| CCAACATCACCACCTTCCTT+TGG | - | chr4.4:33383451-33383470 | None:intergenic | 50.0% | |
| CCCAGCTCAGTCAGAAATCA+AGG | + | chr4.4:33385353-33385372 | MS.gene74328:CDS | 50.0% | |
| CTTCTCCTACTACCAACAGC+AGG | - | chr4.4:33383646-33383665 | None:intergenic | 50.0% | |
| GAGTGTCTCCCAGAATGAAG+GGG | + | chr4.4:33383975-33383994 | MS.gene74328:CDS | 50.0% | |
| GATGGAACTTCTGGTGACTC+TGG | + | chr4.4:33385048-33385067 | MS.gene74328:CDS | 50.0% | |
| GCAGGCTGAACCAAAAGAAG+AGG | + | chr4.4:33384267-33384286 | MS.gene74328:CDS | 50.0% | |
| GCTCTTTACGTGAGAGAGTG+TGG | - | chr4.4:33382902-33382921 | None:intergenic | 50.0% | |
| GGAGATTGCTGCATCAGAAG+AGG | + | chr4.4:33384621-33384640 | MS.gene74328:CDS | 50.0% | |
| GGAGATTGCTGCATCTGAAG+AGG | + | chr4.4:33384591-33384610 | MS.gene74328:CDS | 50.0% | |
| GTTTGGTCAGCAATCTCCAC+AGG | - | chr4.4:33384649-33384668 | None:intergenic | 50.0% | |
| TATTGCTCCTGAGACTGCTG+TGG | + | chr4.4:33384909-33384928 | MS.gene74328:CDS | 50.0% | |
| TCATCCCCACAAGCATCATC+AGG | - | chr4.4:33384817-33384836 | None:intergenic | 50.0% | |
| TCTTCTCCACTCCCTGCATT+TGG | - | chr4.4:33385554-33385573 | None:intergenic | 50.0% | |
| TGATGCAGAGGATGTGTTGC+AGG | + | chr4.4:33384249-33384268 | MS.gene74328:CDS | 50.0% | |
| TGATGTCCAAATGCAGGGAG+TGG | + | chr4.4:33385545-33385564 | MS.gene74328:CDS | 50.0% | |
| TGCATCAGAAGAGGTTCCTG+TGG | + | chr4.4:33384630-33384649 | MS.gene74328:CDS | 50.0% | |
| TTCTGACTGAGCTGGGCAAA+GGG | - | chr4.4:33385349-33385368 | None:intergenic | 50.0% | |
| TTTCTGACTGAGCTGGGCAA+AGG | - | chr4.4:33385350-33385369 | None:intergenic | 50.0% | |
| ! | ACTACCAACAGCAGGAGTAC+CGG | - | chr4.4:33383638-33383657 | None:intergenic | 50.0% |
| ! | CACTCTACCTTCTCTGGTTC+AGG | - | chr4.4:33385000-33385019 | None:intergenic | 50.0% |
| ! | CCAAAGGAAGGTGGTGATGT+TGG | + | chr4.4:33383448-33383467 | MS.gene74328:CDS | 50.0% |
| ! | CTAGCTCTTGTCCTACTGCT+AGG | - | chr4.4:33383790-33383809 | None:intergenic | 50.0% |
| ! | GGTACCTGATGATGCTTGTG+GGG | + | chr4.4:33384810-33384829 | MS.gene74328:CDS | 50.0% |
| ! | GTAGTTCTACGAGCTGTTCG+TGG | - | chr4.4:33383490-33383509 | None:intergenic | 50.0% |
| ! | GTGGTACCTGATGATGCTTG+TGG | + | chr4.4:33384808-33384827 | MS.gene74328:CDS | 50.0% |
| !! | CTGCTGTTGGTAGTAGGAGA+AGG | + | chr4.4:33383644-33383663 | MS.gene74328:CDS | 50.0% |
| !! | GTACTCCTGCTGTTGGTAGT+AGG | + | chr4.4:33383638-33383657 | MS.gene74328:CDS | 50.0% |
| !! | GTTTCTACAAGGGTTAGCCG+TGG | + | chr4.4:33383550-33383569 | MS.gene74328:CDS | 50.0% |
| !! | TGTTGCTGGCTTGTCTCTTG+AGG | + | chr4.4:33384729-33384748 | MS.gene74328:CDS | 50.0% |
| AGCGTCAGCCATGGCAACAT+TGG | - | chr4.4:33382967-33382986 | None:intergenic | 55.0% | |
| AGGAGGTCCGTGAGATTGGT+GGG | + | chr4.4:33383874-33383893 | MS.gene74328:CDS | 55.0% | |
| AGGATCTGAGCAGCCTGAAC+AGG | + | chr4.4:33384501-33384520 | MS.gene74328:intron | 55.0% | |
| CTACTGCTAGGAGCTACAGC+AGG | - | chr4.4:33383778-33383797 | None:intergenic | 55.0% | |
| CTGCTGTAGCTCCTAGCAGT+AGG | + | chr4.4:33383776-33383795 | MS.gene74328:CDS | 55.0% | |
| GAGACTGCTGTGGTGCCTAA+TGG | + | chr4.4:33384919-33384938 | MS.gene74328:CDS | 55.0% | |
| GCTCTTCCCCACCAATCTCA+CGG | - | chr4.4:33383884-33383903 | None:intergenic | 55.0% | |
| GCTGTTCGTGGTTGAACAGC+TGG | - | chr4.4:33383478-33383497 | None:intergenic | 55.0% | |
| GTAGAGGCGGAGTTGCTGAA+GGG | + | chr4.4:33383575-33383594 | MS.gene74328:CDS | 55.0% | |
| TAGAGGCGGAGTTGCTGAAG+GGG | + | chr4.4:33383576-33383595 | MS.gene74328:CDS | 55.0% | |
| TCTGACTGAGCTGGGCAAAG+GGG | - | chr4.4:33385348-33385367 | None:intergenic | 55.0% | |
| TTAGGCACCACAGCAGTCTC+AGG | - | chr4.4:33384919-33384938 | None:intergenic | 55.0% | |
| ! | AGAAGGCATACAGCACCAGG+AGG | + | chr4.4:33383857-33383876 | MS.gene74328:CDS | 55.0% |
| ! | GATGAGTTTGGCGGACACTG+AGG | + | chr4.4:33383912-33383931 | MS.gene74328:CDS | 55.0% |
| ! | TGCAGAAGGCATACAGCACC+AGG | + | chr4.4:33383854-33383873 | MS.gene74328:CDS | 55.0% |
| ! | TTTGGCGGACACTGAGGACA+CGG | + | chr4.4:33383918-33383937 | MS.gene74328:CDS | 55.0% |
| !! | TCTACAAGGGTTAGCCGTGG+TGG | + | chr4.4:33383553-33383572 | MS.gene74328:CDS | 55.0% |
| CAACTCCGCCTCTACCACCA+CGG | - | chr4.4:33383570-33383589 | None:intergenic | 60.0% | |
| CACCAATCTCACGGACCTCC+TGG | - | chr4.4:33383875-33383894 | None:intergenic | 60.0% | |
| CACCAGGAGGTCCGTGAGAT+TGG | + | chr4.4:33383870-33383889 | MS.gene74328:CDS | 60.0% | |
| CAGGAGGTCCGTGAGATTGG+TGG | + | chr4.4:33383873-33383892 | MS.gene74328:CDS | 60.0% | |
| GGAGGTCCGTGAGATTGGTG+GGG | + | chr4.4:33383875-33383894 | MS.gene74328:CDS | 60.0% | |
| GGTAGAGGCGGAGTTGCTGA+AGG | + | chr4.4:33383574-33383593 | MS.gene74328:CDS | 60.0% | |
| GTTAGCCGTGGTGGTAGAGG+CGG | + | chr4.4:33383562-33383581 | MS.gene74328:CDS | 60.0% | |
| !! | AGCTGAGAGAGCGTCAGCCA+TGG | - | chr4.4:33382976-33382995 | None:intergenic | 60.0% |
| !! | AGGGTTAGCCGTGGTGGTAG+AGG | + | chr4.4:33383559-33383578 | MS.gene74328:CDS | 60.0% |
| GCTGCCGGTACTCCTGCTGT+TGG | + | chr4.4:33383631-33383650 | MS.gene74328:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 33382891 | 33385616 | 33382891 | ID=MS.gene74328 |
| chr4.4 | mRNA | 33382891 | 33385616 | 33382891 | ID=MS.gene74328.t1;Parent=MS.gene74328 |
| chr4.4 | exon | 33382891 | 33383004 | 33382891 | ID=MS.gene74328.t1.exon1;Parent=MS.gene74328.t1 |
| chr4.4 | CDS | 33382891 | 33383004 | 33382891 | ID=cds.MS.gene74328.t1;Parent=MS.gene74328.t1 |
| chr4.4 | exon | 33383421 | 33384018 | 33383421 | ID=MS.gene74328.t1.exon2;Parent=MS.gene74328.t1 |
| chr4.4 | CDS | 33383421 | 33384018 | 33383421 | ID=cds.MS.gene74328.t1;Parent=MS.gene74328.t1 |
| chr4.4 | exon | 33384125 | 33384385 | 33384125 | ID=MS.gene74328.t1.exon3;Parent=MS.gene74328.t1 |
| chr4.4 | CDS | 33384125 | 33384385 | 33384125 | ID=cds.MS.gene74328.t1;Parent=MS.gene74328.t1 |
| chr4.4 | exon | 33384503 | 33385616 | 33384503 | ID=MS.gene74328.t1.exon4;Parent=MS.gene74328.t1 |
| chr4.4 | CDS | 33384503 | 33385616 | 33384503 | ID=cds.MS.gene74328.t1;Parent=MS.gene74328.t1 |
| Gene Sequence |
| Protein sequence |
