AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82810.t1 MTR_6g004630 97.426 505 12 1 3 506 1 505 0.0 1016
MS.gene82810.t1 MTR_6g004610 89.827 462 47 0 42 503 1 462 0.0 875
MS.gene82810.t1 MTR_6g004670 81.818 506 89 3 1 504 1 505 0.0 863
MS.gene82810.t1 MTR_6g004600 63.127 518 178 5 1 506 1 517 0.0 661
MS.gene82810.t1 MTR_6g004590 62.741 518 180 4 1 506 1 517 0.0 653
MS.gene82810.t1 MTR_8g088470 55.622 498 208 5 9 504 5 491 0.0 565
MS.gene82810.t1 MTR_7g033580 53.846 507 222 5 1 506 1 496 0.0 553
MS.gene82810.t1 MTR_7g033570 54.582 502 220 4 6 506 2 496 0.0 551
MS.gene82810.t1 MTR_1g036200 51.154 520 219 10 3 506 1 501 1.47e-175 503
MS.gene82810.t1 MTR_1g035790 50.195 512 237 9 1 504 1 502 1.37e-173 498
MS.gene82810.t1 MTR_1g035750 50.098 509 234 6 10 506 7 507 2.50e-172 495
MS.gene82810.t1 MTR_1g035670 48.795 498 243 6 14 504 10 502 1.37e-170 491
MS.gene82810.t1 MTR_1g036130 47.358 511 257 6 1 504 1 506 2.39e-167 483
MS.gene82810.t1 MTR_1g035760 48.283 495 225 6 17 506 13 481 7.95e-166 478
MS.gene82810.t1 MTR_1g035580 47.471 514 242 8 1 504 1 496 1.50e-164 475
MS.gene82810.t1 MTR_1g050362 48.054 514 247 10 3 504 1 506 3.92e-163 472
MS.gene82810.t1 MTR_1g035800 48.356 517 249 8 1 504 1 512 6.70e-163 471
MS.gene82810.t1 MTR_1g036270 46.435 519 259 9 1 506 1 513 1.85e-161 468
MS.gene82810.t1 MTR_1g036010 47.421 504 250 9 14 506 10 509 1.98e-160 465
MS.gene82810.t1 MTR_1g035940 46.199 513 262 8 4 506 1 509 3.10e-159 462
MS.gene82810.t1 MTR_1g035830 47.222 504 251 9 14 506 10 509 3.98e-159 462
MS.gene82810.t1 MTR_1g035860 47.059 442 224 6 9 446 15 450 6.70e-139 410
MS.gene82810.t1 MTR_1g069715 49.512 410 183 7 88 481 1 402 1.67e-138 415
MS.gene82810.t1 MTR_1g037560 38.447 528 295 9 3 504 20 543 2.67e-125 377
MS.gene82810.t1 MTR_1g037550 37.805 492 285 8 30 504 60 547 1.46e-114 350
MS.gene82810.t1 MTR_4g075110 36.863 510 300 10 9 505 50 550 1.65e-110 339
MS.gene82810.t1 MTR_8g030590 36.590 522 299 11 2 506 6 512 3.95e-109 335
MS.gene82810.t1 MTR_8g098435 34.749 518 309 11 2 506 6 507 6.29e-100 310
MS.gene82810.t1 MTR_5g070010 36.066 488 283 9 37 506 34 510 2.78e-98 306
MS.gene82810.t1 MTR_3g080580 34.433 485 291 8 37 504 43 517 2.27e-93 294
MS.gene82810.t1 MTR_3g463060 34.719 481 288 8 37 506 39 504 1.28e-91 289
MS.gene82810.t1 MTR_4g012320 60.280 214 84 1 294 506 12 225 5.66e-90 275
MS.gene82810.t1 MTR_7g029275 32.809 509 311 10 12 504 15 508 1.92e-88 280
MS.gene82810.t1 MTR_7g096340 33.641 434 261 9 82 504 85 502 3.74e-86 274
MS.gene82810.t1 MTR_1g070365 30.994 513 330 10 1 504 7 504 5.33e-84 269
MS.gene82810.t1 MTR_7g096320 33.102 432 266 8 82 504 86 503 3.29e-83 267
MS.gene82810.t1 MTR_7g088330 32.443 524 305 16 5 504 10 508 6.12e-83 266
MS.gene82810.t1 MTR_4g119660 30.608 526 323 11 10 504 1 515 1.99e-81 262
MS.gene82810.t1 MTR_5g019140 30.550 527 324 11 10 505 16 531 1.10e-80 261
MS.gene82810.t1 MTR_1g070345 32.568 479 297 13 37 505 43 505 2.72e-80 259
MS.gene82810.t1 MTR_1g060550 34.793 434 258 8 82 504 93 512 2.14e-79 257
MS.gene82810.t1 MTR_4g054920 31.545 466 285 11 55 504 69 516 2.81e-79 257
MS.gene82810.t1 MTR_8g035860 31.967 488 301 13 6 480 15 484 3.03e-79 256
MS.gene82810.t1 MTR_2g086040 30.723 498 312 11 12 504 29 498 2.73e-78 254
MS.gene82810.t1 MTR_1g102220 29.645 479 312 11 37 504 42 506 4.54e-78 253
MS.gene82810.t1 MTR_8g035810 31.352 488 309 12 4 480 13 485 5.85e-77 251
MS.gene82810.t1 MTR_8g035780 34.136 457 264 13 30 470 40 475 7.03e-77 250
MS.gene82810.t1 MTR_8g035820 32.245 490 301 13 4 480 13 484 8.44e-77 250
MS.gene82810.t1 MTR_7g406990 38.719 359 198 10 34 379 47 396 5.94e-73 238
MS.gene82810.t1 MTR_8g035680 27.027 481 322 11 37 504 48 512 1.77e-67 226
MS.gene82810.t1 MTR_8g035760 27.443 481 321 11 37 505 48 512 7.68e-67 224
MS.gene82810.t1 MTR_8g035810 30.837 454 288 12 4 446 13 451 2.01e-65 219
MS.gene82810.t1 MTR_8g035680 27.528 356 236 7 161 504 20 365 2.15e-50 176
MS.gene82810.t1 MTR_8g035810 29.427 384 248 10 4 377 13 383 1.09e-45 164
MS.gene82810.t1 MTR_1g102210 29.091 330 205 6 170 496 49 352 5.27e-44 159
MS.gene82810.t1 MTR_1g070370 35.317 252 147 5 173 422 5 242 2.34e-43 154
MS.gene82810.t1 MTR_6g084040 40.116 172 83 3 17 187 13 165 3.23e-35 129
MS.gene82810.t1 MTR_6g004570 38.491 265 109 13 243 468 1 250 1.14e-30 120
MS.gene82810.t1 MTR_7g079440 24.324 444 300 15 76 504 226 648 1.69e-30 125
MS.gene82810.t1 MTR_5g009110 24.841 471 301 14 76 504 111 570 9.76e-28 117
MS.gene82810.t1 MTR_1g040110 47.321 112 56 1 129 237 56 167 5.36e-27 107
MS.gene82810.t1 MTR_1g050590 44.538 119 63 2 250 367 2 118 4.54e-26 103
MS.gene82810.t1 MTR_1g062190 23.864 440 300 14 80 504 120 539 3.84e-24 106
MS.gene82810.t1 MTR_7g079440 26.446 363 237 12 76 427 226 569 4.21e-24 106
MS.gene82810.t1 MTR_5g009110 24.480 433 274 14 114 504 1 422 4.79e-24 104
MS.gene82810.t1 MTR_2g010250 27.820 266 185 7 245 504 241 505 1.62e-22 100
MS.gene82810.t1 MTR_2g062670 34.320 169 99 3 171 338 66 223 1.76e-22 100
MS.gene82810.t1 MTR_1g101050 28.626 262 171 8 233 489 248 498 3.83e-22 99.8
MS.gene82810.t1 MTR_7g006900 28.916 249 154 9 258 501 237 467 9.89e-22 98.6
MS.gene82810.t1 MTR_1g101040 28.409 264 171 7 233 493 252 500 1.42e-21 98.2
MS.gene82810.t1 MTR_6g072490 29.600 250 160 8 245 489 262 500 1.57e-21 98.2
MS.gene82810.t1 MTR_6g017325 29.741 232 143 8 258 484 273 489 2.64e-21 97.4
MS.gene82810.t1 MTR_2g010380 28.000 250 172 6 262 504 261 509 3.39e-21 97.1
MS.gene82810.t1 MTR_2g010330 24.181 397 266 11 125 504 129 507 9.69e-21 95.5
MS.gene82810.t1 MTR_5g009110 27.108 332 218 9 76 393 111 432 1.09e-20 95.1
MS.gene82810.t1 MTR_2g010290 28.846 260 168 9 259 504 276 532 2.27e-20 94.7
MS.gene82810.t1 MTR_4g095050 25.926 297 201 8 172 465 173 453 4.99e-20 93.6
MS.gene82810.t1 MTR_6g084900 25.506 247 167 5 243 483 1 236 7.62e-20 89.7
MS.gene82810.t1 MTR_5g034900 30.000 200 136 3 308 504 319 517 7.98e-20 92.8
MS.gene82810.t1 MTR_8g098565 27.798 277 166 9 259 504 233 506 8.06e-20 92.8
MS.gene82810.t1 MTR_2g010320 28.063 253 168 6 261 504 256 503 8.79e-20 92.8
MS.gene82810.t1 MTR_6g008500 21.937 506 318 16 1 459 10 485 1.13e-19 92.4
MS.gene82810.t1 MTR_2g023680 24.295 461 295 21 50 493 80 503 1.19e-19 92.4
MS.gene82810.t1 MTR_4g094775 23.270 477 332 15 1 470 4 453 1.20e-19 92.0
MS.gene82810.t1 MTR_4g113650 22.685 432 293 12 75 493 101 504 1.46e-19 92.0
MS.gene82810.t1 MTR_2g061200 22.169 415 275 12 114 503 137 528 1.97e-19 91.7
MS.gene82810.t1 MTR_0171s0030 26.459 257 175 8 228 477 139 388 2.14e-19 90.9
MS.gene82810.t1 MTR_4g089055 23.990 421 289 12 45 454 60 460 2.69e-19 91.3
MS.gene82810.t1 MTR_5g070920 25.210 238 167 5 234 464 225 458 2.90e-19 91.3
MS.gene82810.t1 MTR_8g046580 36.364 132 69 4 353 479 171 292 4.49e-19 88.2
MS.gene82810.t1 MTR_8g046580 26.020 196 123 6 38 232 16 190 1.74e-11 65.5
MS.gene82810.t1 MTR_2g055430 22.479 476 311 18 51 506 81 518 6.12e-19 90.1
MS.gene82810.t1 MTR_4g088195 26.148 283 188 9 218 486 208 483 7.24e-19 90.1
MS.gene82810.t1 MTR_0025s0110 22.004 459 305 14 53 493 88 511 7.28e-19 90.1
MS.gene82810.t1 MTR_2g072400 23.270 477 303 19 51 503 78 515 9.27e-19 89.7
MS.gene82810.t1 MTR_0147s0030 23.829 491 269 21 54 493 92 528 2.05e-18 88.6
MS.gene82810.t1 MTR_1g015860 29.020 255 160 10 258 504 287 528 2.33e-18 88.6
MS.gene82810.t1 MTR_6g008530 27.826 230 151 6 238 459 257 479 3.74e-18 87.8
MS.gene82810.t1 MTR_2g072340 21.109 469 331 16 50 506 77 518 3.95e-18 87.8
MS.gene82810.t1 MTR_4g088160 23.750 480 281 18 45 483 40 475 4.38e-18 87.4
MS.gene82810.t1 MTR_0181s0030 22.200 491 355 15 4 482 1 476 5.00e-18 87.4
MS.gene82810.t1 MTR_7g012860 25.820 244 173 6 238 480 235 471 5.14e-18 87.0
MS.gene82810.t1 MTR_0287s0060 25.820 244 173 6 238 480 235 471 5.14e-18 87.0
MS.gene82810.t1 MTR_2g010280 29.703 202 136 4 308 504 303 503 5.63e-18 87.0
MS.gene82810.t1 MTR_2g061750 29.255 188 110 5 79 248 12 194 7.56e-18 82.4
MS.gene82810.t1 MTR_2g061740 29.255 188 110 5 79 248 12 194 8.90e-18 82.4
MS.gene82810.t1 MTR_7g012330 27.570 214 144 6 269 480 266 470 1.00e-17 86.3
MS.gene82810.t1 MTR_1g036140 44.565 92 49 1 253 344 69 158 1.07e-17 80.9
MS.gene82810.t1 MTR_8g042060 28.044 271 168 12 248 503 229 487 1.14e-17 85.9
MS.gene82810.t1 MTR_8g042060 28.044 271 168 12 248 503 265 523 1.18e-17 86.3
MS.gene82810.t1 MTR_3g025260 25.610 246 164 8 233 468 231 467 1.37e-17 85.9
MS.gene82810.t1 MTR_5g095230 24.841 471 308 22 50 505 76 515 1.45e-17 85.9
MS.gene82810.t1 MTR_2g055470 22.440 459 302 18 51 489 81 505 2.11e-17 85.5
MS.gene82810.t1 MTR_8g008530 28.037 214 139 4 295 503 315 518 2.70e-17 85.1
MS.gene82810.t1 MTR_0171s0020 22.895 380 275 11 98 470 101 469 3.47e-17 84.7
MS.gene82810.t1 MTR_5g470730 24.757 206 144 4 234 431 225 427 3.87e-17 84.0
MS.gene82810.t1 MTR_3g104560 26.667 240 169 7 267 504 167 401 4.10e-17 84.0
MS.gene82810.t1 MTR_8g104030 24.896 241 166 6 238 470 8 241 4.21e-17 82.0
MS.gene82810.t1 MTR_4g018800 23.028 469 316 18 28 473 43 489 4.54e-17 84.3
MS.gene82810.t1 MTR_4g088170 25.606 289 182 10 218 485 208 484 4.93e-17 84.3
MS.gene82810.t1 MTR_5g009110 26.871 294 191 9 114 393 1 284 5.38e-17 82.4
MS.gene82810.t1 MTR_3g104560 26.667 240 169 7 267 504 302 536 5.61e-17 84.0
MS.gene82810.t1 MTR_3g093530 25.541 231 162 5 276 503 300 523 9.98e-17 83.2
MS.gene82810.t1 MTR_1g023730 24.464 233 165 5 250 480 259 482 1.08e-16 83.2
MS.gene82810.t1 MTR_2g072250 24.160 476 303 20 51 505 77 515 1.12e-16 83.2
MS.gene82810.t1 MTR_6g084770 23.967 242 167 5 238 470 233 466 1.24e-16 82.8
MS.gene82810.t1 MTR_8g063280 25.391 256 177 7 258 504 248 498 1.26e-16 82.8
MS.gene82810.t1 MTR_8g042000 19.457 442 304 13 75 496 107 516 1.72e-16 82.4
MS.gene82810.t1 MTR_6g008600 25.514 243 167 6 238 473 256 491 1.73e-16 82.4
MS.gene82810.t1 MTR_6g008620 26.786 224 156 6 233 452 249 468 2.07e-16 82.4
MS.gene82810.t1 MTR_5g070830 23.643 258 180 6 234 483 335 583 2.22e-16 82.4
MS.gene82810.t1 MTR_4g062510 24.024 333 222 10 185 493 175 500 2.73e-16 82.0
MS.gene82810.t1 MTR_7g103450 25.610 246 173 5 229 473 245 481 3.02e-16 81.6
MS.gene82810.t1 MTR_4g077210 26.872 227 155 6 233 458 235 451 3.44e-16 81.6
MS.gene82810.t1 MTR_4g048580 22.336 488 327 19 3 470 6 461 3.71e-16 81.3
MS.gene82810.t1 MTR_5g070710 23.950 238 169 5 234 464 224 456 3.92e-16 81.3
MS.gene82810.t1 MTR_4g071710 25.191 262 169 7 241 483 234 487 4.29e-16 81.3
MS.gene82810.t1 MTR_5g016410 25.589 297 201 9 172 465 170 449 4.44e-16 81.3
MS.gene82810.t1 MTR_8g042020 23.188 276 197 6 235 503 255 522 4.71e-16 81.3
MS.gene82810.t1 MTR_8g104100 23.894 226 156 6 254 470 4 222 5.05e-16 78.6
MS.gene82810.t1 MTR_2g072380 25.455 275 182 9 245 506 89 353 5.10e-16 79.7
MS.gene82810.t1 MTR_4g109470 23.529 391 254 15 114 483 111 477 8.54e-16 80.5
MS.gene82810.t1 MTR_2g072380 25.455 275 182 9 245 506 229 493 9.78e-16 80.1
MS.gene82810.t1 MTR_6g008430 25.197 254 173 9 233 480 245 487 1.24e-15 79.7
MS.gene82810.t1 MTR_6g008650 21.616 495 346 16 7 473 9 489 1.25e-15 79.7
MS.gene82810.t1 MTR_5g070690 24.370 238 168 5 234 463 223 456 1.32e-15 79.7
MS.gene82810.t1 MTR_5g070800 24.370 238 168 5 234 463 223 456 1.32e-15 79.7
MS.gene82810.t1 MTR_1g091003 26.407 231 158 6 243 473 241 459 1.49e-15 79.3
MS.gene82810.t1 MTR_7g075610 23.260 503 325 19 9 483 8 477 1.52e-15 79.7
MS.gene82810.t1 MTR_1g103670 25.792 221 150 6 239 458 239 446 1.53e-15 79.3
MS.gene82810.t1 MTR_1g069200 23.950 238 174 4 245 482 260 490 1.61e-15 79.3
MS.gene82810.t1 MTR_2g062680 30.612 147 70 3 288 430 19 137 2.25e-15 75.1
MS.gene82810.t1 MTR_7g087520 23.516 438 289 15 57 465 50 470 2.60e-15 79.0
MS.gene82810.t1 MTR_0171s0010 23.873 377 241 15 116 470 119 471 2.77e-15 79.0
MS.gene82810.t1 MTR_7g092600 21.204 382 247 9 123 470 112 473 3.07e-15 78.6
MS.gene82810.t1 MTR_2g010300 27.723 202 126 5 308 504 303 489 4.13e-15 78.2
MS.gene82810.t1 MTR_3g025230 24.924 329 209 12 171 480 168 477 4.21e-15 78.2
MS.gene82810.t1 MTR_5g094660 21.903 452 316 17 45 480 40 470 4.27e-15 78.2
MS.gene82810.t1 MTR_2g437840 24.742 291 199 7 172 459 170 443 4.53e-15 78.2
MS.gene82810.t1 MTR_2g073480 28.780 205 130 7 260 459 170 363 5.11e-15 77.4
MS.gene82810.t1 MTR_5g070700 24.793 242 164 7 234 464 225 459 5.47e-15 77.8
MS.gene82810.t1 MTR_8g042040 26.641 259 170 9 248 503 265 506 5.97e-15 77.8
MS.gene82810.t1 MTR_2g073440 28.922 204 129 7 260 458 237 429 6.18e-15 77.4
MS.gene82810.t1 MTR_3g014880 24.696 247 176 7 233 473 248 490 6.24e-15 77.8
MS.gene82810.t1 MTR_1g085680 21.133 459 286 17 75 501 99 513 7.80e-15 77.4
MS.gene82810.t1 MTR_4g062500 25.279 269 181 9 238 493 235 496 8.10e-15 77.4
MS.gene82810.t1 MTR_6g008640 23.418 316 219 10 170 473 183 487 9.07e-15 77.0
MS.gene82810.t1 MTR_4g104610 29.193 161 109 3 294 454 291 446 9.37e-15 77.0
MS.gene82810.t1 MTR_4g088400 27.200 250 172 5 233 480 250 491 1.23e-14 76.6
MS.gene82810.t1 MTR_5g007450 26.291 213 146 5 271 483 270 471 1.82e-14 76.3
MS.gene82810.t1 MTR_6g042610 22.157 510 320 20 8 475 11 485 2.10e-14 75.9
MS.gene82810.t1 MTR_7g055793 28.837 215 129 7 292 493 263 466 2.15e-14 75.9
MS.gene82810.t1 MTR_7g055793 28.837 215 129 7 292 493 318 521 3.01e-14 75.5
MS.gene82810.t1 MTR_8g027040 25.664 226 153 7 251 473 298 511 3.30e-14 75.5
MS.gene82810.t1 MTR_7g079440 25.725 276 177 10 76 338 226 486 3.70e-14 75.1
MS.gene82810.t1 MTR_5g091760 25.338 296 187 10 181 473 183 447 3.95e-14 75.1
MS.gene82810.t1 MTR_8g076290 24.359 234 159 8 233 454 223 450 4.04e-14 75.1
MS.gene82810.t1 MTR_5g094550 23.715 253 182 7 230 480 228 471 4.56e-14 75.1
MS.gene82810.t1 MTR_5g007460 26.364 220 150 5 254 470 227 437 5.24e-14 74.7
MS.gene82810.t1 MTR_4g104570 30.667 150 99 3 305 454 1 145 5.57e-14 71.2
MS.gene82810.t1 MTR_1g031700 20.122 492 344 17 9 483 12 471 5.59e-14 74.7
MS.gene82810.t1 MTR_7g027960 25.746 268 177 10 218 470 203 463 6.10e-14 74.7
MS.gene82810.t1 MTR_4g104540 29.193 161 109 3 294 454 221 376 6.14e-14 74.3
MS.gene82810.t1 MTR_3g024520 24.316 329 211 12 171 480 168 477 6.21e-14 74.7
MS.gene82810.t1 MTR_5g070850 24.372 398 250 16 95 465 87 460 7.14e-14 74.3
MS.gene82810.t1 MTR_3g436390 26.383 235 159 7 234 463 231 456 8.55e-14 73.9
MS.gene82810.t1 MTR_1g091023 25.490 204 138 6 272 473 268 459 1.01e-13 73.9
MS.gene82810.t1 MTR_1g091010 27.513 189 123 6 272 458 267 443 1.07e-13 73.6
MS.gene82810.t1 MTR_4g026200 24.280 243 174 6 240 482 237 469 1.50e-13 73.2
MS.gene82810.t1 MTR_7g075580 22.991 448 306 16 57 483 47 476 1.82e-13 73.2
MS.gene82810.t1 MTR_8g012585 21.846 325 236 10 166 480 107 423 1.89e-13 72.8
MS.gene82810.t1 MTR_4g078110 24.545 220 160 4 261 480 235 448 2.09e-13 72.8
MS.gene82810.t1 MTR_1g037370 28.261 184 125 5 276 459 268 444 2.28e-13 72.8
MS.gene82810.t1 MTR_8g035790 34.694 98 62 2 408 504 1 97 2.43e-13 66.6
MS.gene82810.t1 MTR_4g088420 28.079 203 139 5 305 504 31 229 2.81e-13 70.1
MS.gene82810.t1 MTR_4g025980 28.700 223 149 5 263 482 254 469 4.98e-13 71.6
MS.gene82810.t1 MTR_7g098550 24.565 460 273 19 51 485 70 480 7.51e-13 71.2
MS.gene82810.t1 MTR_7g098550 24.249 466 275 19 51 485 70 488 8.21e-13 70.9
MS.gene82810.t1 MTR_4g133750 23.457 243 169 6 248 483 245 477 8.81e-13 70.9
MS.gene82810.t1 MTR_1g031710 27.363 201 129 7 258 458 67 250 8.95e-13 69.7
MS.gene82810.t1 MTR_5g007550 25.123 203 141 5 271 473 270 461 1.06e-12 70.5
MS.gene82810.t1 MTR_4g031820 22.689 476 292 23 51 496 91 520 1.20e-12 70.5
MS.gene82810.t1 MTR_8g469360 26.639 244 158 7 265 493 184 421 1.56e-12 69.7
MS.gene82810.t1 MTR_2g031920 25.562 356 234 16 153 504 159 487 1.79e-12 69.7
MS.gene82810.t1 MTR_8g080520 22.543 346 244 11 167 505 198 526 2.19e-12 69.7
MS.gene82810.t1 MTR_4g088425 26.295 251 174 6 233 480 233 475 2.67e-12 69.3
MS.gene82810.t1 MTR_1750s0010 28.477 151 103 3 304 454 1 146 4.04e-12 64.7
MS.gene82810.t1 MTR_4g005230 25.688 218 149 6 270 486 262 467 4.42e-12 68.6
MS.gene82810.t1 MTR_8g469300 24.194 248 178 7 238 481 237 478 5.76e-12 68.2
MS.gene82810.t1 MTR_4g088405 29.947 187 126 3 295 480 223 405 8.92e-12 67.4
MS.gene82810.t1 MTR_3g057970 24.797 246 162 8 233 470 222 452 1.10e-11 67.4
MS.gene82810.t1 MTR_8g020960 22.851 477 333 15 11 473 15 470 1.46e-11 67.0
MS.gene82810.t1 MTR_0608s0010 20.494 405 259 15 9 395 12 371 1.57e-11 66.2
MS.gene82810.t1 MTR_1g442730 21.181 491 340 16 10 480 8 471 1.59e-11 67.0
MS.gene82810.t1 MTR_4g026080 25.424 177 125 4 305 480 1 171 1.95e-11 63.9
MS.gene82810.t1 MTR_3g057980 24.242 231 158 6 238 463 232 450 2.08e-11 66.6
MS.gene82810.t1 MTR_3g057900 22.538 528 336 22 4 504 6 487 2.12e-11 66.6
MS.gene82810.t1 MTR_3g058110 23.922 255 182 7 233 480 227 476 2.45e-11 66.2
MS.gene82810.t1 MTR_5g095290 19.919 492 346 16 8 480 9 471 3.39e-11 65.9
MS.gene82810.t1 MTR_7g075540 21.978 455 294 15 57 480 47 471 3.91e-11 65.9
MS.gene82810.t1 MTR_1g097220 23.237 241 168 8 271 504 298 528 4.04e-11 65.9
MS.gene82810.t1 MTR_3g058000 22.672 247 175 6 233 470 227 466 4.80e-11 65.5
MS.gene82810.t1 MTR_7g075390 24.066 482 295 19 31 483 39 478 6.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82810.t1 AT2G23180 44.767 516 271 6 1 505 1 513 8.54e-156 454
MS.gene82810.t1 AT4G39490 45.106 521 264 6 1 504 1 516 5.37e-152 444
MS.gene82810.t1 AT4G39480 44.380 516 272 6 1 504 1 513 6.25e-149 436
MS.gene82810.t1 AT4G32170 42.323 508 284 5 1 504 1 503 8.47e-148 433
MS.gene82810.t1 AT1G47620 42.436 509 285 4 2 504 9 515 1.20e-146 431
MS.gene82810.t1 AT4G39500 42.495 513 277 8 2 504 12 516 8.26e-146 428
MS.gene82810.t1 AT4G39500 44.492 472 247 6 42 504 1 466 1.85e-143 421
MS.gene82810.t1 AT4G39510 43.168 505 268 7 8 504 12 505 1.05e-141 417
MS.gene82810.t1 AT2G21910 43.277 476 260 5 36 504 34 506 6.31e-141 416
MS.gene82810.t1 AT5G52320 40.546 476 271 4 33 503 33 501 1.85e-136 404
MS.gene82810.t1 AT1G57750 40.668 509 284 6 1 504 1 496 2.11e-136 404
MS.gene82810.t1 AT1G65340 40.166 483 276 4 27 503 27 502 6.82e-135 400
MS.gene82810.t1 AT5G52320 40.340 471 269 4 33 498 33 496 6.66e-134 397
MS.gene82810.t1 AT5G02900 39.922 516 261 9 1 504 1 479 1.53e-123 370
MS.gene82810.t1 AT5G23190 36.204 511 304 9 9 506 41 542 1.00e-113 347
MS.gene82810.t1 AT1G63710 35.977 517 310 8 3 506 1 509 2.17e-110 338
MS.gene82810.t1 AT1G01600 36.853 502 292 10 22 506 22 515 2.49e-107 331
MS.gene82810.t1 AT1G57750 39.130 437 248 6 1 432 1 424 3.57e-107 327
MS.gene82810.t1 AT4G00360 36.609 519 305 11 4 506 3 513 1.93e-106 328
MS.gene82810.t1 AT1G24540 36.667 480 289 6 37 505 46 521 6.87e-106 326
MS.gene82810.t1 AT5G08250 34.774 509 304 11 14 506 46 542 6.92e-106 327
MS.gene82810.t1 AT2G45970 35.853 516 300 11 8 506 11 512 3.88e-105 325
MS.gene82810.t1 AT5G08250 35.597 486 288 10 37 506 4 480 5.10e-105 323
MS.gene82810.t1 AT3G26125 35.451 488 295 5 37 506 49 534 2.58e-102 317
MS.gene82810.t1 AT5G58860 35.812 511 295 10 8 504 17 508 5.81e-100 310
MS.gene82810.t1 AT1G13140 34.911 507 313 6 10 506 27 526 2.73e-98 307
MS.gene82810.t1 AT1G13150 35.417 480 298 5 37 506 42 519 1.92e-96 302
MS.gene82810.t1 AT1G13140 34.325 504 294 8 10 506 27 500 1.78e-94 296
MS.gene82810.t1 AT3G56630 34.664 476 292 11 37 504 34 498 2.60e-89 282
MS.gene82810.t1 AT1G34540 34.244 476 293 10 37 504 34 497 6.07e-89 281
MS.gene82810.t1 AT3G48520 32.143 476 302 6 37 505 39 500 1.29e-87 278
MS.gene82810.t1 AT5G63450 33.403 479 297 7 35 505 39 503 1.08e-86 276
MS.gene82810.t1 AT5G63450 33.403 479 297 7 35 505 97 561 1.23e-85 275
MS.gene82810.t1 AT2G27690 32.096 458 290 7 53 504 52 494 6.90e-84 268
MS.gene82810.t1 AT2G45510 31.463 499 314 13 9 496 18 499 2.20e-80 259
MS.gene82810.t1 AT1G69500 30.916 524 303 12 23 504 17 523 4.08e-77 251
MS.gene82810.t1 AT2G44890 32.031 512 313 16 1 496 7 499 6.19e-77 251
MS.gene82810.t1 AT3G01900 30.595 487 306 10 29 505 27 491 1.53e-75 246
MS.gene82810.t1 AT2G44890 30.920 511 302 16 1 496 7 481 5.54e-71 234
MS.gene82810.t1 AT3G53130 25.056 443 291 14 80 504 120 539 7.21e-30 123
MS.gene82810.t1 AT1G31800 23.756 442 305 13 76 504 147 569 7.07e-28 117
MS.gene82810.t1 AT5G52400 31.674 221 140 5 262 481 286 496 1.19e-23 104
MS.gene82810.t1 AT2G26710 24.533 428 285 16 75 493 102 500 6.87e-23 102
MS.gene82810.t1 AT5G51900 39.098 133 72 2 219 342 1 133 5.32e-22 95.5
MS.gene82810.t1 AT4G15110 23.529 476 302 19 76 504 118 578 9.72e-22 99.0
MS.gene82810.t1 AT1G66030 32.948 173 94 5 4 164 1 163 3.34e-21 90.9
MS.gene82810.t1 AT4G13290 25.167 449 287 18 45 473 35 454 3.65e-21 97.1
MS.gene82810.t1 AT3G61040 29.956 227 147 7 258 483 255 470 3.14e-20 94.0
MS.gene82810.t1 AT4G37340 25.606 289 194 9 172 458 171 440 7.35e-20 92.8
MS.gene82810.t1 AT3G48300 22.517 453 302 19 44 479 36 456 8.21e-20 92.8
MS.gene82810.t1 AT3G48300 22.517 453 302 19 44 479 38 458 8.29e-20 92.8
MS.gene82810.t1 AT4G13310 24.330 448 300 18 45 473 34 461 9.01e-20 92.8
MS.gene82810.t1 AT3G14680 23.661 448 290 20 51 482 79 490 1.00e-19 92.4
MS.gene82810.t1 AT5G24900 26.459 257 172 7 251 501 162 407 1.90e-19 90.9
MS.gene82810.t1 AT3G48270 23.709 426 276 17 44 452 38 431 2.01e-19 91.7
MS.gene82810.t1 AT5G24900 26.459 257 172 7 251 501 279 524 2.22e-19 91.7
MS.gene82810.t1 AT3G14650 22.737 453 288 19 51 482 79 490 2.65e-19 91.3
MS.gene82810.t1 AT4G37370 25.532 329 203 9 149 465 148 446 6.97e-19 89.7
MS.gene82810.t1 AT3G14660 21.652 448 299 18 51 482 79 490 1.07e-18 89.4
MS.gene82810.t1 AT1G13080 23.120 359 251 9 127 480 16 354 1.10e-18 88.2
MS.gene82810.t1 AT5G57260 26.087 322 213 11 144 452 134 443 1.16e-18 89.4
MS.gene82810.t1 AT5G06905 25.586 512 286 25 4 465 1 467 1.25e-18 89.4
MS.gene82810.t1 AT3G14640 24.236 458 277 23 51 482 79 492 1.68e-18 89.0
MS.gene82810.t1 AT2G24180 27.468 233 163 4 238 470 238 464 1.95e-18 88.6
MS.gene82810.t1 AT3G14640 24.236 458 277 23 51 482 101 514 2.36e-18 88.6
MS.gene82810.t1 AT1G13080 23.238 383 259 10 113 480 110 472 3.91e-18 87.8
MS.gene82810.t1 AT2G30770 24.464 466 310 17 45 489 35 479 7.94e-18 86.7
MS.gene82810.t1 AT1G64940 27.638 199 139 3 308 504 313 508 8.65e-18 86.7
MS.gene82810.t1 AT5G07990 24.803 254 182 5 234 483 228 476 2.02e-17 85.5
MS.gene82810.t1 AT3G20940 22.101 457 309 14 25 462 37 465 4.81e-17 84.3
MS.gene82810.t1 AT3G03470 25.194 258 183 5 255 504 254 509 1.23e-16 83.2
MS.gene82810.t1 AT3G20140 24.425 348 245 9 126 470 135 467 1.30e-16 82.8
MS.gene82810.t1 AT5G38450 30.144 209 130 6 296 501 316 511 1.39e-16 82.8
MS.gene82810.t1 AT2G46660 25.177 282 187 9 234 504 260 528 1.70e-16 82.8
MS.gene82810.t1 AT2G45580 20.000 410 284 17 91 483 100 482 2.06e-16 82.4
MS.gene82810.t1 AT1G64950 27.136 199 140 3 308 504 312 507 2.72e-16 82.0
MS.gene82810.t1 AT3G20950 21.996 491 335 17 5 472 12 477 2.72e-16 82.0
MS.gene82810.t1 AT5G24910 22.512 422 259 19 114 504 148 532 3.74e-16 81.6
MS.gene82810.t1 AT3G14660 25.620 242 166 9 245 482 113 344 4.30e-16 80.5
MS.gene82810.t1 AT4G15350 24.302 358 238 14 126 470 128 465 4.54e-16 81.3
MS.gene82810.t1 AT1G50520 24.024 333 226 14 146 469 157 471 4.76e-16 81.3
MS.gene82810.t1 AT4G13770 26.147 218 149 4 270 483 264 473 5.36e-16 80.9
MS.gene82810.t1 AT2G23190 25.641 312 197 11 156 458 199 484 5.57e-16 81.3
MS.gene82810.t1 AT1G66540 26.484 219 145 5 240 458 66 268 1.00e-15 78.6
MS.gene82810.t1 AT2G45580 23.457 243 171 8 245 483 97 328 1.08e-15 79.0
MS.gene82810.t1 AT2G27010 25.862 232 159 7 243 470 225 447 1.24e-15 79.7
MS.gene82810.t1 AT2G23220 28.448 232 137 6 240 465 254 462 1.49e-15 79.7
MS.gene82810.t1 AT1G66540 26.484 219 145 5 240 458 125 327 1.58e-15 79.0
MS.gene82810.t1 AT3G26830 25.214 234 167 6 238 470 232 458 1.67e-15 79.3
MS.gene82810.t1 AT4G37330 26.941 219 143 5 240 458 236 437 3.22e-15 78.6
MS.gene82810.t1 AT3G14620 22.609 460 296 19 52 492 84 502 3.56e-15 78.6
MS.gene82810.t1 AT5G47990 22.767 347 238 11 146 481 155 482 4.06e-15 78.2
MS.gene82810.t1 AT2G26170 27.143 210 147 6 297 504 233 438 4.68e-15 77.8
MS.gene82810.t1 AT5G35715 23.901 364 258 12 114 470 46 397 4.70e-15 77.8
MS.gene82810.t1 AT2G26170 26.210 248 173 8 263 504 278 521 4.81e-15 78.2
MS.gene82810.t1 AT3G48280 25.000 304 203 13 155 452 147 431 4.94e-15 77.8
MS.gene82810.t1 AT5G24950 24.757 206 148 4 269 473 261 460 5.60e-15 77.8
MS.gene82810.t1 AT3G28740 27.586 232 148 7 240 471 247 458 5.86e-15 77.8
MS.gene82810.t1 AT4G37400 22.414 348 251 7 149 494 147 477 6.54e-15 77.8
MS.gene82810.t1 AT1G11610 23.400 453 310 16 45 480 35 467 7.28e-15 77.4
MS.gene82810.t1 AT1G11610 23.400 453 310 16 45 480 35 467 8.60e-15 77.4
MS.gene82810.t1 AT4G27710 21.158 449 316 14 51 484 74 499 9.67e-15 77.0
MS.gene82810.t1 AT3G48310 20.805 447 305 17 44 473 39 453 1.34e-14 76.6
MS.gene82810.t1 AT3G26270 25.424 236 165 5 238 470 236 463 1.75e-14 76.3
MS.gene82810.t1 AT4G31950 23.904 251 181 6 234 478 231 477 2.27e-14 75.9
MS.gene82810.t1 AT3G14610 26.908 249 155 10 245 482 258 490 2.48e-14 75.9
MS.gene82810.t1 AT1G01190 26.126 222 149 6 275 491 310 521 3.32e-14 75.5
MS.gene82810.t1 AT1G01190 26.126 222 149 6 275 491 305 516 3.62e-14 75.5
MS.gene82810.t1 AT2G25160 25.112 223 146 7 240 452 247 458 4.48e-14 75.1
MS.gene82810.t1 AT3G26230 26.339 224 152 7 251 470 246 460 7.23e-14 74.3
MS.gene82810.t1 AT2G12190 25.101 247 174 6 257 499 265 504 8.32e-14 74.3
MS.gene82810.t1 AT4G39950 24.686 239 170 6 238 473 307 538 8.34e-14 74.3
MS.gene82810.t1 AT4G15360 23.577 369 248 15 115 470 121 468 8.84e-14 74.3
MS.gene82810.t1 AT4G39950 24.686 239 170 6 238 473 267 498 9.85e-14 73.9
MS.gene82810.t1 AT4G12310 24.906 265 189 5 238 497 246 505 1.10e-13 73.9
MS.gene82810.t1 AT3G48290 21.839 435 273 18 44 452 40 433 1.18e-13 73.6
MS.gene82810.t1 AT4G12300 23.043 230 171 3 267 494 271 496 1.39e-13 73.6
MS.gene82810.t1 AT4G31940 23.171 246 180 5 238 478 248 489 1.41e-13 73.6
MS.gene82810.t1 AT4G37410 23.304 339 222 10 141 471 143 451 1.86e-13 73.2
MS.gene82810.t1 AT5G57220 22.156 334 238 7 169 500 164 477 2.00e-13 72.8
MS.gene82810.t1 AT1G64930 25.123 203 145 4 306 504 309 508 2.03e-13 72.8
MS.gene82810.t1 AT5G04330 21.739 253 186 6 238 483 231 478 2.53e-13 72.8
MS.gene82810.t1 AT3G61880 23.695 249 168 8 234 473 260 495 2.90e-13 72.4
MS.gene82810.t1 AT3G20960 25.941 239 156 8 240 470 245 470 4.01e-13 72.0
MS.gene82810.t1 AT3G20960 25.941 239 156 8 240 470 142 367 4.46e-13 71.6
MS.gene82810.t1 AT5G06900 21.654 254 189 5 224 477 222 465 4.48e-13 72.0
MS.gene82810.t1 AT3G61880 23.695 249 168 8 234 473 260 495 5.88e-13 71.6
MS.gene82810.t1 AT4G31500 21.862 247 187 3 238 483 231 472 7.08e-13 71.2
MS.gene82810.t1 AT4G12320 24.528 265 190 5 238 497 244 503 8.50e-13 70.9
MS.gene82810.t1 AT4G20240 24.571 350 237 13 83 426 85 413 1.02e-12 70.5
MS.gene82810.t1 AT3G10570 21.645 231 171 5 247 473 254 478 1.57e-12 70.1
MS.gene82810.t1 AT2G46960 21.749 423 271 17 75 473 99 485 1.61e-12 70.1
MS.gene82810.t1 AT4G31970 23.171 246 180 5 238 478 247 488 1.62e-12 70.1
MS.gene82810.t1 AT2G30750 26.027 219 149 5 259 473 251 460 2.07e-12 69.7
MS.gene82810.t1 AT5G42590 23.045 243 180 4 238 480 232 467 2.36e-12 69.7
MS.gene82810.t1 AT5G04630 22.022 277 197 6 239 504 240 508 2.40e-12 69.7
MS.gene82810.t1 AT3G20110 20.638 470 331 17 6 460 10 452 2.75e-12 69.3
MS.gene82810.t1 AT1G67110 26.531 196 134 4 296 489 310 497 2.86e-12 69.3
MS.gene82810.t1 AT3G26180 23.611 216 159 5 266 480 262 472 2.95e-12 69.3
MS.gene82810.t1 AT3G26180 23.611 216 159 5 266 480 128 338 3.24e-12 68.6
MS.gene82810.t1 AT2G46960 26.829 205 132 8 276 473 176 369 3.26e-12 68.6
MS.gene82810.t1 AT5G09970 24.747 198 139 6 267 462 302 491 1.02e-11 67.8
MS.gene82810.t1 AT4G37360 23.810 315 217 9 147 458 146 440 1.11e-11 67.4
MS.gene82810.t1 AT2G40890 22.271 229 162 7 233 458 229 444 1.37e-11 67.4
MS.gene82810.t1 AT3G20090 24.123 228 153 6 241 460 110 325 1.84e-11 66.2
MS.gene82810.t1 AT3G20090 24.017 229 152 7 241 460 248 463 2.04e-11 66.6
MS.gene82810.t1 AT3G26150 20.705 227 176 3 254 480 250 472 2.06e-11 66.6
MS.gene82810.t1 AT3G44250 22.764 369 253 11 111 470 113 458 2.12e-11 66.6
MS.gene82810.t1 AT5G36220 24.658 219 148 5 240 458 99 300 2.49e-11 65.9
MS.gene82810.t1 AT3G26200 22.941 340 240 11 146 480 147 469 2.63e-11 66.2
MS.gene82810.t1 AT5G36220 24.658 219 148 5 240 458 245 446 2.96e-11 66.2
MS.gene82810.t1 AT3G26170 22.222 216 162 5 266 480 262 472 6.35e-11 65.1
MS.gene82810.t1 AT1G28430 26.697 221 144 7 257 470 260 469 7.30e-11 65.1
MS.gene82810.t1 AT2G02580 24.251 334 231 11 156 482 152 470 8.75e-11 64.7

Find 89 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGATTAAAGAAAATTT+TGG 0.148197 6.1:-679870 MS.gene82810:CDS
ATTAATATTGAAAAGAAGTT+AGG 0.236325 6.1:-679843 MS.gene82810:CDS
GAGAGAAAGCAAGCAATTAA+AGG 0.248200 6.1:-679741 MS.gene82810:CDS
ATAAAGTGCCTAAAAGTATT+TGG 0.249799 6.1:-680211 MS.gene82810:CDS
GTTTACCAGCATGAACTATT+TGG 0.255278 6.1:-680651 MS.gene82810:CDS
TTGTATTAGGATTAACAATA+TGG 0.260430 6.1:+679700 None:intergenic
ATTGGATAATCTGTAAGAAT+TGG 0.281071 6.1:+680782 None:intergenic
TGCTGGACCTAGAACTTGTT+TGG 0.303612 6.1:-679538 MS.gene82810:CDS
AACGTCTCCAACGACGAATT+TGG 0.307483 6.1:+680813 None:intergenic
TGGGGAGATTTGAAGAGATA+TGG 0.308634 6.1:-679653 MS.gene82810:CDS
CATGAGATATTTGAAGCCTT+TGG 0.310048 6.1:-680554 MS.gene82810:CDS
TGCTTTCTCTCAAAGGGTAT+TGG 0.318382 6.1:+679753 None:intergenic
AGAATATGCCTTCTTCGATT+TGG 0.319635 6.1:+680240 None:intergenic
TCCTTTCCCAAACAAGTTCT+AGG 0.335209 6.1:+679531 None:intergenic
AAATCAATGGAAAGACAATT+AGG 0.345217 6.1:+680293 None:intergenic
TATTGCTACACACCCTTTAG+TGG 0.359348 6.1:-679907 MS.gene82810:CDS
GAGAAGTTTGATTCCTTTGT+TGG 0.359539 6.1:-680411 MS.gene82810:CDS
TGAAGAATGGTTTGAAGGTT+AGG 0.363580 6.1:-679398 MS.gene82810:CDS
GTGCTATATGTGAAGCTCTA+AGG 0.366133 6.1:-679785 MS.gene82810:CDS
GATATGGGGAAAAGATTGTT+TGG 0.376603 6.1:-679637 MS.gene82810:CDS
CGAGGCAAGTTCCACAATAA+TGG 0.379155 6.1:+680743 None:intergenic
GCTGGACCTAGAACTTGTTT+GGG 0.381694 6.1:-679537 MS.gene82810:CDS
TGCATATACAAATTGATCAT+AGG 0.384677 6.1:+680130 None:intergenic
GGGGAGATTTGAAGAGATAT+GGG 0.397435 6.1:-679652 MS.gene82810:CDS
TTGGATAATCTGTAAGAATT+GGG 0.409571 6.1:+680783 None:intergenic
TAGGAACACATGTGAGTTCA+TGG 0.415085 6.1:-680681 MS.gene82810:CDS
ACAATCGAATGGCTTAATAT+AGG 0.424668 6.1:+679429 None:intergenic
CAGAGACATGGAAATACAAT+AGG 0.424848 6.1:-680508 MS.gene82810:CDS
ATTGTTCTTCTCATGAAGAA+TGG 0.427552 6.1:-679411 MS.gene82810:CDS
GAATCTTAGCTTCCACTAAA+GGG 0.434801 6.1:+679895 None:intergenic
GCATTCAATCTCTTTGTAGC+GGG 0.437335 6.1:-679972 MS.gene82810:CDS
GCCTTCTCACATGCGACATC+AGG 0.439836 6.1:+680269 None:intergenic
AGAATCTTAGCTTCCACTAA+AGG 0.439883 6.1:+679894 None:intergenic
GTATTTCCATGTCTCTGAAT+CGG 0.444231 6.1:+680514 None:intergenic
TTAATATTGAAAAGAAGTTA+GGG 0.449609 6.1:-679842 MS.gene82810:CDS
AATATTTGTTCCGTAGTCCT+TGG 0.452032 6.1:-680323 MS.gene82810:CDS
TCTCATGAAGAATGGTTTGA+AGG 0.452138 6.1:-679403 MS.gene82810:CDS
CTATAACTTCAGCGCTTACA+TGG 0.457857 6.1:-679941 MS.gene82810:CDS
TTTCTCTCAAAGGGTATTGG+AGG 0.464054 6.1:+679756 None:intergenic
GAACATGACCATCCACTACT+TGG 0.470328 6.1:+679451 None:intergenic
ATTGCTTGCTTTCTCTCAAA+GGG 0.475212 6.1:+679747 None:intergenic
CTTTCAGATATCCATCTCTC+TGG 0.482086 6.1:+679606 None:intergenic
ATATTTGAAGCCTTTGGAGA+TGG 0.486237 6.1:-680548 MS.gene82810:CDS
AATTGCTTGCTTTCTCTCAA+AGG 0.492373 6.1:+679746 None:intergenic
AAGTTCATTAGTTATAATGC+TGG 0.493549 6.1:-679555 MS.gene82810:CDS
GCATGATAATACCATTATTG+TGG 0.500820 6.1:-680754 MS.gene82810:CDS
GAAAATCATTCAAAACAAGT+TGG 0.505159 6.1:-680435 MS.gene82810:CDS
CAACCACTGACCCTTGTTGT+CGG 0.506613 6.1:+680381 None:intergenic
CATGTGAGTTCATGGGACCT+TGG 0.507567 6.1:-680673 MS.gene82810:CDS
TGCGACATCAGGAAAATCAA+TGG 0.516368 6.1:+680280 None:intergenic
TAACATGTGATGCAAGTTGA+TGG 0.518161 6.1:+680616 None:intergenic
TCCTGATGTCGCATGTGAGA+AGG 0.528443 6.1:-680270 MS.gene82810:CDS
TGCAAATATTAAGTCAAAGA+GGG 0.529509 6.1:-680111 MS.gene82810:CDS
TATTGATGTGTAACTAAGCA+TGG 0.538439 6.1:+680871 None:intergenic
AGTGGAAGCTAAGATTCTTG+AGG 0.538509 6.1:-679889 MS.gene82810:CDS
TTGGATCATGTCCGACAACA+AGG 0.540828 6.1:-680392 MS.gene82810:CDS
AACTTTGATGAAAGAAGAGA+AGG 0.544814 6.1:-680039 MS.gene82810:CDS
TAACTAATGAACTTGTAAGA+TGG 0.546221 6.1:+679564 None:intergenic
ACCTAGAACTTGTTTGGGAA+AGG 0.559793 6.1:-679532 MS.gene82810:CDS
ATGCAAATATTAAGTCAAAG+AGG 0.567712 6.1:-680112 MS.gene82810:CDS
AACATGTGATGCAAGTTGAT+GGG 0.575489 6.1:+680617 None:intergenic
GTTGAATATTCCATCTCCAA+AGG 0.578090 6.1:+680538 None:intergenic
GGATTAACAATATGGCCACT+TGG 0.580425 6.1:+679708 None:intergenic
TGGAGTTCAAGCCAGAGAGA+TGG 0.583586 6.1:-679617 MS.gene82810:CDS
GAATTTGGAAGACGATGCAT+AGG 0.584585 6.1:+680828 None:intergenic
TGCATTCAATCTCTTTGTAG+CGG 0.586147 6.1:-679973 MS.gene82810:CDS
GACAATTAGGATCACATCCA+AGG 0.586200 6.1:+680306 None:intergenic
AGTTATTGAAACAACAACAT+AGG 0.587268 6.1:-680700 MS.gene82810:CDS
CAAATATTGTGTCCAAGTAG+TGG 0.596917 6.1:-679463 MS.gene82810:CDS
TCGTCTTCCAAATTCGTCGT+TGG 0.599135 6.1:-680820 MS.gene82810:CDS
AGGATCACATCCAAGGACTA+CGG 0.600087 6.1:+680313 None:intergenic
GAGAGATGGATATCTGAAAG+TGG 0.601641 6.1:-679603 MS.gene82810:CDS
TCATGAGAAGAACAATCGAA+TGG 0.603388 6.1:+679418 None:intergenic
ACTTTGATGAAAGAAGAGAA+GGG 0.611137 6.1:-680038 MS.gene82810:CDS
TATTGTGTCCAAGTAGTGGA+TGG 0.615735 6.1:-679459 MS.gene82810:CDS
AGTGACCAAATAGTTCATGC+TGG 0.619583 6.1:+680646 None:intergenic
AGGAACACATGTGAGTTCAT+GGG 0.625807 6.1:-680680 MS.gene82810:CDS
CATTCAATCTCTTTGTAGCG+GGG 0.631176 6.1:-679971 MS.gene82810:CDS
TGTCCGACAACAAGGGTCAG+TGG 0.632974 6.1:-680384 MS.gene82810:CDS
CTTTGATGAAAGAAGAGAAG+GGG 0.635301 6.1:-680037 MS.gene82810:CDS
TCAACACCGATTCAGAGACA+TGG 0.653719 6.1:-680520 MS.gene82810:CDS
GTTATGAAATCATGAACTCG+AGG 0.654252 6.1:+680725 None:intergenic
GGGAGATTTGAAGAGATATG+GGG 0.657198 6.1:-679651 MS.gene82810:CDS
ACATGTGATGCAAGTTGATG+GGG 0.662103 6.1:+680618 None:intergenic
TAGTTCATGCTGGTAAACCA+AGG 0.676905 6.1:+680656 None:intergenic
TGGATCATGTCCGACAACAA+GGG 0.683502 6.1:-680391 MS.gene82810:CDS
AGATGGATATCTGAAAGTGG+AGG 0.684686 6.1:-679600 MS.gene82810:CDS
TGTCGGACATGATCCAACAA+AGG 0.703258 6.1:+680398 None:intergenic
AAAGGTGATATACTTCCAAG+TGG 0.704090 6.1:-679723 MS.gene82810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGTATTATTGTATT+AGG + chr6.1:680568-680587 None:intergenic 10.0%
!! ATGTAGAAAAAATAATGAAA+TGG - chr6.1:680177-680196 MS.gene82810:CDS 15.0%
!! ATTAATATTGAAAAGAAGTT+AGG - chr6.1:680409-680428 MS.gene82810:CDS 15.0%
!! TTAATATTGAAAAGAAGTTA+GGG - chr6.1:680410-680429 MS.gene82810:CDS 15.0%
!!! TAACTTCTTTTCAATATTAA+TGG + chr6.1:680410-680429 None:intergenic 15.0%
!! TTGTATTAGGATTAACAATA+TGG + chr6.1:680555-680574 None:intergenic 20.0%
!!! ACTATTTTTCTTGTATTCAA+TGG - chr6.1:680579-680598 MS.gene82810:CDS 20.0%
!!! AGGAGATTAAAGAAAATTTT+GGG - chr6.1:680383-680402 MS.gene82810:CDS 20.0%
!!! CTATTTTTCTTGTATTCAAT+GGG - chr6.1:680580-680599 MS.gene82810:CDS 20.0%
!!! TATTTTTCTTGTATTCAATG+GGG - chr6.1:680581-680600 MS.gene82810:CDS 20.0%
!!! TGTTTTGACAATTATGTTAA+GGG - chr6.1:679665-679684 MS.gene82810:CDS 20.0%
! AAATCAATGGAAAGACAATT+AGG + chr6.1:679962-679981 None:intergenic 25.0%
! AAGTTCATTAGTTATAATGC+TGG - chr6.1:680697-680716 MS.gene82810:CDS 25.0%
! AGTTATTGAAACAACAACAT+AGG - chr6.1:679552-679571 MS.gene82810:CDS 25.0%
! ATGCAAATATTAAGTCAAAG+AGG - chr6.1:680140-680159 MS.gene82810:CDS 25.0%
! ATTGGATAATCTGTAAGAAT+TGG + chr6.1:679473-679492 None:intergenic 25.0%
! GAAAATCATTCAAAACAAGT+TGG - chr6.1:679817-679836 MS.gene82810:CDS 25.0%
! TAACTAATGAACTTGTAAGA+TGG + chr6.1:680691-680710 None:intergenic 25.0%
! TGCAAATATTAAGTCAAAGA+GGG - chr6.1:680141-680160 MS.gene82810:CDS 25.0%
! TGCATATACAAATTGATCAT+AGG + chr6.1:680125-680144 None:intergenic 25.0%
! TTGGATAATCTGTAAGAATT+GGG + chr6.1:679472-679491 None:intergenic 25.0%
!! AAAAAGCTAGTTTATCTTCA+TGG - chr6.1:680445-680464 MS.gene82810:CDS 25.0%
!! CTTACAGATTATCCAATTTT+TGG - chr6.1:679476-679495 MS.gene82810:CDS 25.0%
!! GAGGAGATTAAAGAAAATTT+TGG - chr6.1:680382-680401 MS.gene82810:CDS 25.0%
!!! ATAAAGTGCCTAAAAGTATT+TGG - chr6.1:680041-680060 MS.gene82810:CDS 25.0%
!!! GTGTTTTGACAATTATGTTA+AGG - chr6.1:679664-679683 MS.gene82810:CDS 25.0%
AACTTTGATGAAAGAAGAGA+AGG - chr6.1:680213-680232 MS.gene82810:CDS 30.0%
ACAATCGAATGGCTTAATAT+AGG + chr6.1:680826-680845 None:intergenic 30.0%
ACTTTGATGAAAGAAGAGAA+GGG - chr6.1:680214-680233 MS.gene82810:CDS 30.0%
ATTGTTCTTCTCATGAAGAA+TGG - chr6.1:680841-680860 MS.gene82810:CDS 30.0%
GCATGATAATACCATTATTG+TGG - chr6.1:679498-679517 MS.gene82810:CDS 30.0%
GGTATTATCATGCCAAAAAT+TGG + chr6.1:679491-679510 None:intergenic 30.0%
GTATTTGGAAGTTGCAAAAA+TGG - chr6.1:680056-680075 MS.gene82810:CDS 30.0%
TATTGATGTGTAACTAAGCA+TGG + chr6.1:679384-679403 None:intergenic 30.0%
TGAAGAGAAAAATATGACCA+AGG - chr6.1:680090-680109 MS.gene82810:CDS 30.0%
TTGCAAAAATGGCTTCAAAT+TGG - chr6.1:680067-680086 MS.gene82810:CDS 30.0%
! GCATGATGATAAGTTTTTGA+GGG - chr6.1:680252-680271 MS.gene82810:CDS 30.0%
! TGCAACTTCCAAATACTTTT+AGG + chr6.1:680052-680071 None:intergenic 30.0%
! TGCATGATGATAAGTTTTTG+AGG - chr6.1:680251-680270 MS.gene82810:CDS 30.0%
AAAGGTGATATACTTCCAAG+TGG - chr6.1:680529-680548 MS.gene82810:CDS 35.0%
AATATTTGTTCCGTAGTCCT+TGG - chr6.1:679929-679948 MS.gene82810:CDS 35.0%
AATTGCTTGCTTTCTCTCAA+AGG + chr6.1:680509-680528 None:intergenic 35.0%
AGAATATGCCTTCTTCGATT+TGG + chr6.1:680015-680034 None:intergenic 35.0%
AGAATCTTAGCTTCCACTAA+AGG + chr6.1:680361-680380 None:intergenic 35.0%
ATTGCTTGCTTTCTCTCAAA+GGG + chr6.1:680508-680527 None:intergenic 35.0%
CAAATATTGTGTCCAAGTAG+TGG - chr6.1:680789-680808 MS.gene82810:CDS 35.0%
CAGAGACATGGAAATACAAT+AGG - chr6.1:679744-679763 MS.gene82810:CDS 35.0%
CTTTGATGAAAGAAGAGAAG+GGG - chr6.1:680215-680234 MS.gene82810:CDS 35.0%
GAATCTTAGCTTCCACTAAA+GGG + chr6.1:680360-680379 None:intergenic 35.0%
GAGAAGTTTGATTCCTTTGT+TGG - chr6.1:679841-679860 MS.gene82810:CDS 35.0%
GAGAGAAAGCAAGCAATTAA+AGG - chr6.1:680511-680530 MS.gene82810:CDS 35.0%
GATATGGGGAAAAGATTGTT+TGG - chr6.1:680615-680634 MS.gene82810:CDS 35.0%
GTATTTCCATGTCTCTGAAT+CGG + chr6.1:679741-679760 None:intergenic 35.0%
GTTATGAAATCATGAACTCG+AGG + chr6.1:679530-679549 None:intergenic 35.0%
GTTGAATATTCCATCTCCAA+AGG + chr6.1:679717-679736 None:intergenic 35.0%
GTTTACCAGCATGAACTATT+TGG - chr6.1:679601-679620 MS.gene82810:CDS 35.0%
TCATGAGAAGAACAATCGAA+TGG + chr6.1:680837-680856 None:intergenic 35.0%
TCTCATGAAGAATGGTTTGA+AGG - chr6.1:680849-680868 MS.gene82810:CDS 35.0%
TGAAGAATGGTTTGAAGGTT+AGG - chr6.1:680854-680873 MS.gene82810:CDS 35.0%
TGCATTCAATCTCTTTGTAG+CGG - chr6.1:680279-680298 MS.gene82810:CDS 35.0%
! ATATTTGAAGCCTTTGGAGA+TGG - chr6.1:679704-679723 MS.gene82810:CDS 35.0%
! CATGAGATATTTGAAGCCTT+TGG - chr6.1:679698-679717 MS.gene82810:CDS 35.0%
! GCTTTTAACCAAATCGAAGA+AGG - chr6.1:680004-680023 MS.gene82810:CDS 35.0%
! TAACATGTGATGCAAGTTGA+TGG + chr6.1:679639-679658 None:intergenic 35.0%
!! AACATGTGATGCAAGTTGAT+GGG + chr6.1:679638-679657 None:intergenic 35.0%
AGATGGATATCTGAAAGTGG+AGG - chr6.1:680652-680671 MS.gene82810:CDS 40.0%
AGGAACACATGTGAGTTCAT+GGG - chr6.1:679572-679591 MS.gene82810:CDS 40.0%
AGTGACCAAATAGTTCATGC+TGG + chr6.1:679609-679628 None:intergenic 40.0%
AGTGGAAGCTAAGATTCTTG+AGG - chr6.1:680363-680382 MS.gene82810:CDS 40.0%
CATTCAATCTCTTTGTAGCG+GGG - chr6.1:680281-680300 MS.gene82810:CDS 40.0%
CTATAACTTCAGCGCTTACA+TGG - chr6.1:680311-680330 MS.gene82810:CDS 40.0%
CTTTCAGATATCCATCTCTC+TGG + chr6.1:680649-680668 None:intergenic 40.0%
GAATTTGGAAGACGATGCAT+AGG + chr6.1:679427-679446 None:intergenic 40.0%
GACAATTAGGATCACATCCA+AGG + chr6.1:679949-679968 None:intergenic 40.0%
GAGAGATGGATATCTGAAAG+TGG - chr6.1:680649-680668 MS.gene82810:CDS 40.0%
GCATTCAATCTCTTTGTAGC+GGG - chr6.1:680280-680299 MS.gene82810:CDS 40.0%
GGATTAACAATATGGCCACT+TGG + chr6.1:680547-680566 None:intergenic 40.0%
GGGAGATTTGAAGAGATATG+GGG - chr6.1:680601-680620 MS.gene82810:CDS 40.0%
GGGGAGATTTGAAGAGATAT+GGG - chr6.1:680600-680619 MS.gene82810:CDS 40.0%
GTGCTATATGTGAAGCTCTA+AGG - chr6.1:680467-680486 MS.gene82810:CDS 40.0%
TAGGAACACATGTGAGTTCA+TGG - chr6.1:679571-679590 MS.gene82810:CDS 40.0%
TAGTTCATGCTGGTAAACCA+AGG + chr6.1:679599-679618 None:intergenic 40.0%
TATTGCTACACACCCTTTAG+TGG - chr6.1:680345-680364 MS.gene82810:CDS 40.0%
TCCTTTCCCAAACAAGTTCT+AGG + chr6.1:680724-680743 None:intergenic 40.0%
TGCGACATCAGGAAAATCAA+TGG + chr6.1:679975-679994 None:intergenic 40.0%
TGGGGAGATTTGAAGAGATA+TGG - chr6.1:680599-680618 MS.gene82810:CDS 40.0%
! ACCTAGAACTTGTTTGGGAA+AGG - chr6.1:680720-680739 MS.gene82810:CDS 40.0%
! ATCATAGGTTTTGCATGCCT+TGG + chr6.1:680110-680129 None:intergenic 40.0%
! TATTGTGTCCAAGTAGTGGA+TGG - chr6.1:680793-680812 MS.gene82810:CDS 40.0%
! TGCTTTCTCTCAAAGGGTAT+TGG + chr6.1:680502-680521 None:intergenic 40.0%
!! ACATGTGATGCAAGTTGATG+GGG + chr6.1:679637-679656 None:intergenic 40.0%
!! TTTCTCTCAAAGGGTATTGG+AGG + chr6.1:680499-680518 None:intergenic 40.0%
AACGTCTCCAACGACGAATT+TGG + chr6.1:679442-679461 None:intergenic 45.0%
AGGATCACATCCAAGGACTA+CGG + chr6.1:679942-679961 None:intergenic 45.0%
CGAGGCAAGTTCCACAATAA+TGG + chr6.1:679512-679531 None:intergenic 45.0%
GAACATGACCATCCACTACT+TGG + chr6.1:680804-680823 None:intergenic 45.0%
TCGTCTTCCAAATTCGTCGT+TGG - chr6.1:679432-679451 MS.gene82810:CDS 45.0%
TGGATCATGTCCGACAACAA+GGG - chr6.1:679861-679880 MS.gene82810:CDS 45.0%
TGTCGGACATGATCCAACAA+AGG + chr6.1:679857-679876 None:intergenic 45.0%
TTGGATCATGTCCGACAACA+AGG - chr6.1:679860-679879 MS.gene82810:CDS 45.0%
! GCTGGACCTAGAACTTGTTT+GGG - chr6.1:680715-680734 MS.gene82810:CDS 45.0%
! TGCTGGACCTAGAACTTGTT+TGG - chr6.1:680714-680733 MS.gene82810:CDS 45.0%
!! TCAACACCGATTCAGAGACA+TGG - chr6.1:679732-679751 MS.gene82810:CDS 45.0%
CATGTGAGTTCATGGGACCT+TGG - chr6.1:679579-679598 MS.gene82810:CDS 50.0%
TCCTGATGTCGCATGTGAGA+AGG - chr6.1:679982-680001 MS.gene82810:CDS 50.0%
TGGAGTTCAAGCCAGAGAGA+TGG - chr6.1:680635-680654 MS.gene82810:CDS 50.0%
! CAACCACTGACCCTTGTTGT+CGG + chr6.1:679874-679893 None:intergenic 50.0%
GCCTTCTCACATGCGACATC+AGG + chr6.1:679986-680005 None:intergenic 55.0%
TGTCCGACAACAAGGGTCAG+TGG - chr6.1:679868-679887 MS.gene82810:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 679377 680897 679377 ID=MS.gene82810
chr6.1 mRNA 679377 680897 679377 ID=MS.gene82810.t1;Parent=MS.gene82810
chr6.1 exon 679377 680897 679377 ID=MS.gene82810.t1.exon1;Parent=MS.gene82810.t1
chr6.1 CDS 679377 680897 679377 ID=cds.MS.gene82810.t1;Parent=MS.gene82810.t1
Gene Sequence

>MS.gene82810

ATGGCCATGCTTAGTTACACATCAATAATTTGTGCATTCTTCTTCTTCCTATGCATCGTCTTCCAAATTCGTCGTTGGAGACGTTGCAAATACCCAATTCTTACAGATTATCCAATTTTTGGCATGATAATACCATTATTGTGGAACTTGCCTCGAGTTCATGATTTCATAACTCAGTTATTGAAACAACAACATAGGAACACATGTGAGTTCATGGGACCTTGGTTTACCAGCATGAACTATTTGGTCACTAGTGACCCCATCAACTTGCATCACATGTTAAGCAAGTGTTTTGACAATTATGTTAAGGGTCATGAATATCATGAGATATTTGAAGCCTTTGGAGATGGAATATTCAACACCGATTCAGAGACATGGAAATACAATAGGTCTCTTTTTCACTCTATTCTCAAACAAAGAGATTTTGAATTCTTTCAAAAGAAAATCATTCAAAACAAGTTGGAGAGAAGTTTGATTCCTTTGTTGGATCATGTCCGACAACAAGGGTCAGTGGTTGATTTACAAGATGTCTTCAATCGTTTCACATTCGACAATATTTGTTCCGTAGTCCTTGGATGTGATCCTAATTGTCTTTCCATTGATTTTCCTGATGTCGCATGTGAGAAGGCTTTTAACCAAATCGAAGAAGGCATATTCTATAGACATAAAGTGCCTAAAAGTATTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAATATGACCAAGGCATGCAAAACCTATGATCAATTTGTATATGCAAATATTAAGTCAAAGAGGGAAGAGCTAAGCAAATGTAGAAAAAATAATGAAATGGTTGATTTGCTAACAACTTTGATGAAAGAAGAGAAGGGGTCACAAGTAGTAATGCATGATGATAAGTTTTTGAGGGATGTTGCATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCAGCGCTTACATGGCTCTTCTATCTTATTGCTACACACCCTTTAGTGGAAGCTAAGATTCTTGAGGAGATTAAAGAAAATTTTGGGACCATTAATATTGAAAAGAAGTTAGGGTTTGATGAGTTGAAAAAGCTAGTTTATCTTCATGGTGCTATATGTGAAGCTCTAAGGCTTTTTCCTCCAATACCCTTTGAGAGAAAGCAAGCAATTAAAGGTGATATACTTCCAAGTGGCCATATTGTTAATCCTAATACAATAATACTATTTTTCTTGTATTCAATGGGGAGATTTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAGTGGAGGCATTGTTCATATACCATCTTACAAGTTCATTAGTTATAATGCTGGACCTAGAACTTGTTTGGGAAAGGACTTGTCGTTCATTCAAATTAAGATGACAACAATTGCTATTTTGAGCAAATATTGTGTCCAAGTAGTGGATGGTCATGTTCCTATATTAAGCCATTCGATTGTTCTTCTCATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA

Protein sequence

>MS.gene82810.t1

MAMLSYTSIICAFFFFLCIVFQIRRWRRCKYPILTDYPIFGMIIPLLWNLPRVHDFITQLLKQQHRNTCEFMGPWFTSMNYLVTSDPINLHHMLSKCFDNYVKGHEYHEIFEAFGDGIFNTDSETWKYNRSLFHSILKQRDFEFFQKKIIQNKLERSLIPLLDHVRQQGSVVDLQDVFNRFTFDNICSVVLGCDPNCLSIDFPDVACEKAFNQIEEGIFYRHKVPKSIWKLQKWLQIGEEKNMTKACKTYDQFVYANIKSKREELSKCRKNNEMVDLLTTLMKEEKGSQVVMHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTINIEKKLGFDELKKLVYLHGAICEALRLFPPIPFERKQAIKGDILPSGHIVNPNTIILFFLYSMGRFEEIWGKDCLEFKPERWISESGGIVHIPSYKFISYNAGPRTCLGKDLSFIQIKMTTIAILSKYCVQVVDGHVPILSHSIVLLMKNGLKVRITKREI