Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050738.t1 | RHN78545.1 | 77.1 | 834 | 169 | 5 | 1 | 819 | 1 | 827 | 0.00E+00 | 1191.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050738.t1 | A0A072VGE3 | 77.1 | 834 | 169 | 5 | 1 | 819 | 13 | 839 | 0.0e+00 | 1191.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050738 | MS.gene054416 | 0.840169 | 1.02E-57 | -1.69E-46 |
| MS.gene050738 | MS.gene072542 | 0.908634 | 1.38E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050738 | MS.gene050891 | PPI |
| MS.gene050738 | MS.gene072482 | PPI |
| MS.gene050738 | MS.gene072542 | PPI |
| MS.gene67159 | MS.gene050738 | PPI |
| MS.gene050738 | MS.gene072481 | PPI |
| MS.gene072481 | MS.gene050738 | PPI |
| MS.gene050738 | MS.gene29352 | PPI |
| MS.gene050738 | MS.gene063225 | PPI |
| MS.gene050738 | MS.gene78588 | PPI |
| MS.gene050738 | MS.gene054416 | PPI |
| MS.gene050738 | MS.gene65461 | PPI |
| MS.gene050738 | MS.gene072483 | PPI |
| MS.gene050738 | MS.gene78587 | PPI |
| MS.gene050738 | MS.gene29351 | PPI |
| MS.gene050738 | MS.gene050890 | PPI |
| MS.gene050738 | MS.gene050893 | PPI |
| MS.gene050738 | MS.gene050889 | PPI |
| MS.gene050738 | MS.gene053360 | PPI |
| MS.gene050738 | MS.gene072484 | PPI |
| MS.gene050738 | MS.gene78586 | PPI |
| MS.gene050738 | MS.gene072485 | PPI |
| MS.gene050738 | MS.gene78585 | PPI |
| MS.gene050738 | MS.gene67159 | PPI |
| MS.gene78587 | MS.gene050738 | PPI |
| MS.gene050738 | MS.gene78584 | PPI |
| MS.gene050738 | MS.gene050892 | PPI |
| MS.gene050738 | MS.gene050942 | PPI |
| MS.gene050738 | MS.gene29350 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050738.t1 | MTR_1g041895 | 81.295 | 834 | 134 | 6 | 1 | 819 | 13 | 839 | 0.0 | 1321 |
| MS.gene050738.t1 | MTR_7g113220 | 70.000 | 800 | 168 | 11 | 1 | 787 | 13 | 753 | 0.0 | 1025 |
| MS.gene050738.t1 | MTR_7g113280 | 67.681 | 789 | 188 | 8 | 1 | 771 | 13 | 752 | 0.0 | 1017 |
| MS.gene050738.t1 | MTR_7g113270 | 68.944 | 805 | 172 | 12 | 1 | 787 | 13 | 757 | 0.0 | 1007 |
| MS.gene050738.t1 | MTR_7g112390 | 77.174 | 460 | 37 | 2 | 119 | 578 | 1 | 392 | 0.0 | 674 |
| MS.gene050738.t1 | MTR_7g112390 | 85.657 | 251 | 12 | 1 | 567 | 817 | 478 | 704 | 2.44e-132 | 411 |
| MS.gene050738.t1 | MTR_7g113250 | 73.261 | 460 | 89 | 4 | 1 | 453 | 1 | 433 | 0.0 | 672 |
| MS.gene050738.t1 | MTR_7g113250 | 63.317 | 199 | 62 | 2 | 618 | 806 | 434 | 631 | 3.54e-69 | 241 |
| MS.gene050738.t1 | MTR_7g108470 | 42.667 | 450 | 213 | 6 | 10 | 415 | 28 | 476 | 1.69e-106 | 349 |
| MS.gene050738.t1 | MTR_4g119630 | 45.504 | 367 | 175 | 6 | 10 | 360 | 40 | 397 | 5.86e-95 | 305 |
| MS.gene050738.t1 | MTR_3g049350 | 79.882 | 169 | 27 | 2 | 292 | 453 | 3 | 171 | 4.40e-83 | 266 |
| MS.gene050738.t1 | MTR_3g049350 | 57.143 | 77 | 32 | 1 | 618 | 694 | 172 | 247 | 7.85e-18 | 84.7 |
| MS.gene050738.t1 | MTR_2g436970 | 35.045 | 331 | 175 | 8 | 14 | 343 | 17 | 308 | 2.20e-58 | 206 |
| MS.gene050738.t1 | MTR_7g113290 | 73.043 | 115 | 30 | 1 | 557 | 671 | 13 | 126 | 1.87e-43 | 160 |
| MS.gene050738.t1 | MTR_4g119640 | 33.621 | 116 | 66 | 3 | 19 | 132 | 27 | 133 | 1.72e-12 | 65.9 |
| MS.gene050738.t1 | MTR_5g007800 | 49.315 | 73 | 26 | 2 | 725 | 797 | 12 | 73 | 2.26e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050738.t1 | AT1G09040 | 44.045 | 445 | 197 | 7 | 11 | 410 | 35 | 472 | 1.37e-109 | 357 |
| MS.gene050738.t1 | AT1G09050 | 43.596 | 445 | 199 | 7 | 11 | 410 | 35 | 472 | 2.80e-106 | 348 |
| MS.gene050738.t1 | AT1G09050 | 43.596 | 445 | 199 | 7 | 11 | 410 | 35 | 472 | 2.80e-106 | 348 |
| MS.gene050738.t1 | AT2G47820 | 40.471 | 467 | 220 | 10 | 6 | 421 | 30 | 489 | 5.00e-101 | 331 |
| MS.gene050738.t1 | AT2G47820 | 40.471 | 467 | 220 | 10 | 6 | 421 | 30 | 489 | 5.00e-101 | 331 |
| MS.gene050738.t1 | AT1G55050 | 42.377 | 446 | 203 | 10 | 14 | 421 | 27 | 456 | 6.52e-98 | 325 |
| MS.gene050738.t1 | AT1G55050 | 42.377 | 446 | 203 | 10 | 14 | 421 | 27 | 456 | 6.52e-98 | 325 |
Find 165 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 7.3:+4251052 | MS.gene050738:CDS |
| CTACTTGGTTTGTTTATGTT+TGG | 0.213716 | 7.3:+4250147 | MS.gene050738:CDS |
| TGACTCTGCTGATTACTAAT+TGG | 0.231314 | 7.3:-4252070 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.3:+4252330 | MS.gene050738:CDS |
| TCTTCGAGCACGAGAATATT+AGG | 0.253225 | 7.3:-4251179 | None:intergenic |
| CCAAATGTAATGATCTCTTC+TGG | 0.254135 | 7.3:+4250964 | MS.gene050738:CDS |
| GTTTCTAGTGCTCTGTCTCC+TGG | 0.283035 | 7.3:-4252374 | None:intergenic |
| TACTTGGTTTGTTTATGTTT+GGG | 0.295382 | 7.3:+4250148 | MS.gene050738:CDS |
| ACTTTACTAACTGAATTTAC+AGG | 0.296069 | 7.3:-4251401 | None:intergenic |
| ATCGCAAGATACTTTGTTAC+AGG | 0.312695 | 7.3:+4250386 | MS.gene050738:CDS |
| AGCTGTTTGGCCCCGCTTAT+TGG | 0.313727 | 7.3:+4250989 | MS.gene050738:CDS |
| CAATCACTTTCCTTTGCAAT+TGG | 0.316197 | 7.3:+4250000 | MS.gene050738:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.3:+4250976 | MS.gene050738:CDS |
| CTAATTGGATCACAAACATT+TGG | 0.325977 | 7.3:-4252055 | None:intergenic |
| TGGTACTCATGCCCTATTCT+AGG | 0.331873 | 7.3:-4249895 | None:intergenic |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 7.3:+4251363 | MS.gene050738:CDS |
| ATGCAGTTGATCCTATTAAA+AGG | 0.341204 | 7.3:+4251915 | MS.gene050738:CDS |
| AATCTTTGACCGGAGGATTT+CGG | 0.347413 | 7.3:+4250931 | MS.gene050738:CDS |
| CATGTATTGATTACCGTCAT+TGG | 0.349047 | 7.3:-4252155 | None:intergenic |
| TGCATCATTGAGAATTCTTC+AGG | 0.352473 | 7.3:+4251974 | MS.gene050738:CDS |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.354435 | 7.3:+4250891 | MS.gene050738:CDS |
| TGTCTCCTGGGATTTATATC+AGG | 0.358743 | 7.3:-4252361 | None:intergenic |
| TGAAAATAGCAAAATGATAA+AGG | 0.363910 | 7.3:+4252249 | MS.gene050738:CDS |
| TGAAAGGATCTTTGTGGGTC+TGG | 0.367041 | 7.3:-4252477 | None:intergenic |
| TGAGAATTCTTCAGGAGGTC+TGG | 0.367894 | 7.3:+4251982 | MS.gene050738:CDS |
| TAATTGGATCACAAACATTT+GGG | 0.375096 | 7.3:-4252054 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.378866 | 7.3:+4251334 | MS.gene050738:CDS |
| TAAAGATCATATAAAATTCA+TGG | 0.383096 | 7.3:+4251316 | MS.gene050738:CDS |
| CAAGAAGAAAAGCATTTGAT+TGG | 0.384292 | 7.3:+4252580 | MS.gene050738:CDS |
| CCAGAAGAGATCATTACATT+TGG | 0.384833 | 7.3:-4250964 | None:intergenic |
| ATCTTAGCTTCCACCATCAT+TGG | 0.387710 | 7.3:-4251668 | None:intergenic |
| TTTATTGTAGGTAGCAGATC+GGG | 0.388475 | 7.3:-4251297 | None:intergenic |
| TCTTCTTTGAAGTCTATTGT+TGG | 0.388479 | 7.3:+4250759 | MS.gene050738:CDS |
| ACTAGGTTTGGTGTCGAACC+TGG | 0.389475 | 7.3:+4250834 | MS.gene050738:CDS |
| TTGATTTGAGTCCTAGAATA+GGG | 0.416775 | 7.3:+4249884 | MS.gene050738:CDS |
| AAGAGAGACCTTACTAGGTT+TGG | 0.424779 | 7.3:+4250822 | MS.gene050738:CDS |
| TGCCGCAAGGCTCGAACAAA+AGG | 0.426599 | 7.3:+4252505 | MS.gene050738:CDS |
| CTTGATTTGAGTCCTAGAAT+AGG | 0.429697 | 7.3:+4249883 | MS.gene050738:CDS |
| TTGAAGTCTATTGTTGGACT+TGG | 0.435074 | 7.3:+4250765 | MS.gene050738:CDS |
| AGACATCAATTCATGTCAAT+TGG | 0.437759 | 7.3:+4250074 | MS.gene050738:CDS |
| TTTCTAGTGCTCTGTCTCCT+GGG | 0.444972 | 7.3:-4252373 | None:intergenic |
| CCAACATCACAAGGGATTCT+CGG | 0.446123 | 7.3:-4252322 | None:intergenic |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 7.3:+4250792 | MS.gene050738:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.3:-4251035 | None:intergenic |
| CTGGCAGATTGAGTAGCTCC+TGG | 0.448809 | 7.3:+4250100 | MS.gene050738:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 7.3:-4251371 | None:intergenic |
| CAAATGTAATGATCTCTTCT+GGG | 0.451033 | 7.3:+4250965 | MS.gene050738:CDS |
| GAAAAGCATTTGATTGGAGA+TGG | 0.462252 | 7.3:+4252586 | MS.gene050738:CDS |
| CAGATAAACTAGGAATTTCT+CGG | 0.462819 | 7.3:+4252008 | MS.gene050738:CDS |
| CAATGAGAAAGAACCAGAAA+AGG | 0.464058 | 7.3:+4251223 | MS.gene050738:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.3:+4250265 | MS.gene050738:CDS |
| CCGAGAATCCCTTGTGATGT+TGG | 0.466160 | 7.3:+4252322 | MS.gene050738:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 7.3:-4251348 | None:intergenic |
| AGGAGAAGAGAGACCTTACT+AGG | 0.469113 | 7.3:+4250817 | MS.gene050738:CDS |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 7.3:+4250051 | MS.gene050738:CDS |
| TGGTCTTCATAGAGAAAGTA+AGG | 0.471893 | 7.3:+4251622 | MS.gene050738:CDS |
| TTTCAGTTTCAACATGCCTC+AGG | 0.472552 | 7.3:+4252213 | MS.gene050738:CDS |
| CCCGCTTATTGGCAAGAGGT+TGG | 0.473043 | 7.3:+4251000 | MS.gene050738:CDS |
| GAGAATTCTTCAGGAGGTCT+GGG | 0.474898 | 7.3:+4251983 | MS.gene050738:CDS |
| GACAAAAGTTCTTGTTGCCT+CGG | 0.476314 | 7.3:-4250336 | None:intergenic |
| TCATTATGTATCAATGTGAC+TGG | 0.481414 | 7.3:-4250033 | None:intergenic |
| CAGGAGCTACTCAATCTGCC+AGG | 0.486972 | 7.3:-4250099 | None:intergenic |
| AAGGATTGAAAGGATCTTTG+TGG | 0.490321 | 7.3:-4252483 | None:intergenic |
| TGTTGGACTTGGTGTTCTTG+TGG | 0.492469 | 7.3:+4250776 | MS.gene050738:CDS |
| CCAACCTCTTGCCAATAAGC+GGG | 0.493049 | 7.3:-4251000 | None:intergenic |
| CTGCTCTGATTTCTTAAGCA+TGG | 0.494102 | 7.3:-4249932 | None:intergenic |
| TCAGGTGTCTAAGTCATTTG+TGG | 0.494888 | 7.3:+4250707 | MS.gene050738:intron |
| TAGAATAGGGCATGAGTACC+AGG | 0.495777 | 7.3:+4249897 | MS.gene050738:CDS |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 7.3:+4251341 | MS.gene050738:CDS |
| GCCAACCTCTTGCCAATAAG+CGG | 0.499224 | 7.3:-4251001 | None:intergenic |
| ATATGTCTAAAAGCATTAAA+CGG | 0.500870 | 7.3:+4251477 | MS.gene050738:CDS |
| TTTGCTCAGCCGAAATCCTC+CGG | 0.501641 | 7.3:-4250940 | None:intergenic |
| TGGATCACAAACATTTGGGT+TGG | 0.502365 | 7.3:-4252050 | None:intergenic |
| TTGTGTATCCGCATCACTCC+AGG | 0.502846 | 7.3:-4250118 | None:intergenic |
| GGAGCATCTTCTGATTCAAC+GGG | 0.506307 | 7.3:-4251587 | None:intergenic |
| GTTCGACACCAAACCTAGTA+AGG | 0.507637 | 7.3:-4250830 | None:intergenic |
| TGCACAGCTTCTGAATCAGC+AGG | 0.507765 | 7.3:-4249973 | None:intergenic |
| AGGATTGAAAGGATCTTTGT+GGG | 0.514560 | 7.3:-4252482 | None:intergenic |
| ATCGTCATTGTTCAGATCAC+GGG | 0.522866 | 7.3:+4252542 | MS.gene050738:CDS |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 7.3:+4252399 | MS.gene050738:CDS |
| GCCCCACGACTGTTCTTCCC+AGG | 0.523209 | 7.3:-4250852 | None:intergenic |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.3:-4251086 | None:intergenic |
| CTTTATTGTAGGTAGCAGAT+CGG | 0.523420 | 7.3:-4251298 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.528556 | 7.3:+4250253 | MS.gene050738:CDS |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.3:+4251104 | MS.gene050738:CDS |
| ACCTGATCTTACTCTCCGAT+TGG | 0.529963 | 7.3:-4251882 | None:intergenic |
| AGCAGACAGAAGCTTGGAAG+AGG | 0.533341 | 7.3:+4252111 | MS.gene050738:CDS |
| TTCTTCAGCAGACAGAAGCT+TGG | 0.535359 | 7.3:+4252105 | MS.gene050738:CDS |
| TCACGAAGCATCAGTCCAAT+CGG | 0.535452 | 7.3:+4251867 | MS.gene050738:CDS |
| AGACAGAAGCTTGGAAGAGG+AGG | 0.535920 | 7.3:+4252114 | MS.gene050738:CDS |
| AATGAGAAAGAACCAGAAAA+GGG | 0.538329 | 7.3:+4251224 | MS.gene050738:CDS |
| TTCTTAGAGAACAAATCGAT+GGG | 0.539496 | 7.3:+4250195 | MS.gene050738:CDS |
| CTCGAAGAAGAAGCTAAAGT+TGG | 0.542576 | 7.3:+4251194 | MS.gene050738:CDS |
| TCTGATTTCTTAAGCATGGA+AGG | 0.545252 | 7.3:-4249928 | None:intergenic |
| CTATTCTAGGACTCAAATCA+AGG | 0.545701 | 7.3:-4249882 | None:intergenic |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.546113 | 7.3:+4250786 | MS.gene050738:CDS |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.546342 | 7.3:+4252294 | MS.gene050738:CDS |
| TCCTTTCAATCCTTGCCGCA+AGG | 0.548859 | 7.3:+4252492 | MS.gene050738:CDS |
| TTTGTTCGAGCCTTGCGGCA+AGG | 0.549687 | 7.3:-4252502 | None:intergenic |
| GCCTTGCGGCAAGGATTGAA+AGG | 0.549774 | 7.3:-4252493 | None:intergenic |
| AACTGATGATTCGCCAATGA+TGG | 0.550833 | 7.3:+4251655 | MS.gene050738:CDS |
| AGGAGCATCTTCTGATTCAA+CGG | 0.551120 | 7.3:-4251588 | None:intergenic |
| ATTCTTAGAGAACAAATCGA+TGG | 0.554399 | 7.3:+4250194 | MS.gene050738:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 7.3:+4251364 | MS.gene050738:CDS |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 7.3:+4250797 | MS.gene050738:CDS |
| CATCGTCATTGTTCAGATCA+CGG | 0.563807 | 7.3:+4252541 | MS.gene050738:CDS |
| CTAGGTTTGGTGTCGAACCT+GGG | 0.565438 | 7.3:+4250835 | MS.gene050738:CDS |
| ATGTCTAACAGCTGCCACTC+AGG | 0.567399 | 7.3:+4252282 | MS.gene050738:CDS |
| AGGAGCTACTCAATCTGCCA+GGG | 0.569582 | 7.3:-4250098 | None:intergenic |
| TGTATCAATGTGACTGGGAT+GGG | 0.571927 | 7.3:-4250027 | None:intergenic |
| TGGCCCCGCTTATTGGCAAG+AGG | 0.575906 | 7.3:+4250996 | MS.gene050738:CDS |
| GAAATAATACAATCTTTGAC+CGG | 0.578933 | 7.3:+4250921 | MS.gene050738:CDS |
| ATGGAGCATGCGTCTCATGA+AGG | 0.580686 | 7.3:+4249859 | MS.gene050738:CDS |
| AATTCATGTCAATTGGCCCC+TGG | 0.580761 | 7.3:+4250081 | MS.gene050738:CDS |
| TCCAATCGGAGAGTAAGATC+AGG | 0.583223 | 7.3:+4251881 | MS.gene050738:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 7.3:-4252400 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.587239 | 7.3:-4252331 | None:intergenic |
| AAAGTTGATGTAGATGCTGC+TGG | 0.592230 | 7.3:+4251419 | MS.gene050738:CDS |
| GATGCTCCTACTGCTACTAC+TGG | 0.592956 | 7.3:+4251602 | MS.gene050738:CDS |
| AGATACACCTCTGCGACTGT+TGG | 0.594249 | 7.3:-4251723 | None:intergenic |
| AGGTAGCAGATCGGGGCTTG+AGG | 0.598766 | 7.3:-4251289 | None:intergenic |
| TGAAGACCAGTAGTAGCAGT+AGG | 0.600187 | 7.3:-4251608 | None:intergenic |
| AAAGATTGTATTATTTCACT+CGG | 0.605641 | 7.3:-4250915 | None:intergenic |
| TGATGATTCGCCAATGATGG+TGG | 0.608648 | 7.3:+4251658 | MS.gene050738:CDS |
| TGATACTGATGCAAACAAGA+TGG | 0.608686 | 7.3:+4251787 | MS.gene050738:CDS |
| ATGTATCAATGTGACTGGGA+TGG | 0.609324 | 7.3:-4250028 | None:intergenic |
| AACCTGGGAAGAACAGTCGT+GGG | 0.612237 | 7.3:+4250850 | MS.gene050738:CDS |
| TCAGAATTCGATGGAACCTG+AGG | 0.615327 | 7.3:-4252229 | None:intergenic |
| TTTGCTCAAGACATCACTAA+CGG | 0.620063 | 7.3:-4251144 | None:intergenic |
| GAACCTGGGAAGAACAGTCG+TGG | 0.620087 | 7.3:+4250849 | MS.gene050738:CDS |
| TTGATGATAATCAAGTGAAG+AGG | 0.620879 | 7.3:+4251843 | MS.gene050738:CDS |
| TTGATACATAATGAAGAGTG+TGG | 0.621005 | 7.3:+4250042 | MS.gene050738:CDS |
| GAGGAAAGTAAACCATGGCA+AGG | 0.627561 | 7.3:+4251454 | MS.gene050738:CDS |
| GACAGCCTGATATAAATCCC+AGG | 0.628120 | 7.3:+4252356 | MS.gene050738:CDS |
| GAGATTGACTGATTGTGCCA+AGG | 0.628845 | 7.3:+4251940 | MS.gene050738:CDS |
| ATCATTGAGAATTCTTCAGG+AGG | 0.629495 | 7.3:+4251977 | MS.gene050738:CDS |
| TTATTGTAGGTAGCAGATCG+GGG | 0.634121 | 7.3:-4251296 | None:intergenic |
| TGAGTGGCAGCTGTTAGACA+TGG | 0.636795 | 7.3:-4252280 | None:intergenic |
| ATAATACAATCTTTGACCGG+AGG | 0.640323 | 7.3:+4250924 | MS.gene050738:CDS |
| GAAGACAAAGCTTTGCAATG+TGG | 0.642154 | 7.3:-4250885 | None:intergenic |
| GCATCTTCTGATTCAACGGG+CGG | 0.643453 | 7.3:-4251584 | None:intergenic |
| CAACCTCTTGCCAATAAGCG+GGG | 0.645022 | 7.3:-4250999 | None:intergenic |
| GATGGGTAAGCCAATTGCAA+AGG | 0.645390 | 7.3:-4250010 | None:intergenic |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.3:+4250257 | MS.gene050738:CDS |
| CATTATGTATCAATGTGACT+GGG | 0.646100 | 7.3:-4250032 | None:intergenic |
| GTAGATGGTCGGAGTGCAGG+AGG | 0.647585 | 7.3:+4250268 | MS.gene050738:CDS |
| GAGTAGCTCCTGGAGTGATG+CGG | 0.647768 | 7.3:+4250110 | MS.gene050738:CDS |
| GCATGGAAGGAATTTCCACC+TGG | 0.654334 | 7.3:-4249915 | None:intergenic |
| GGTGTCTAAGTCATTTGTGG+AGG | 0.657517 | 7.3:+4250710 | MS.gene050738:intron |
| GGTCTGGGATCAGATAAACT+AGG | 0.658935 | 7.3:+4251998 | MS.gene050738:CDS |
| AATAAAACCAACAGTCGCAG+AGG | 0.660971 | 7.3:+4251716 | MS.gene050738:CDS |
| CGCAGAGGTGTATCTAACTG+TGG | 0.661071 | 7.3:+4251731 | MS.gene050738:CDS |
| CTTAGAGAACAAATCGATGG+GGG | 0.664727 | 7.3:+4250197 | MS.gene050738:CDS |
| GGAGCTACTCAATCTGCCAG+GGG | 0.669247 | 7.3:-4250097 | None:intergenic |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 7.3:-4252296 | None:intergenic |
| CAGTTGATCCTATTAAAAGG+AGG | 0.674014 | 7.3:+4251918 | MS.gene050738:CDS |
| TCTTAGAGAACAAATCGATG+GGG | 0.679364 | 7.3:+4250196 | MS.gene050738:CDS |
| TTGATTATCATCAAACACAC+AGG | 0.682319 | 7.3:-4251834 | None:intergenic |
| CATACGAGGAAAGTAAACCA+TGG | 0.695508 | 7.3:+4251449 | MS.gene050738:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.3:+4251026 | MS.gene050738:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 7.3:+4251344 | MS.gene050738:CDS |
| ACCTGGGAAGAACAGTCGTG+GGG | 0.700618 | 7.3:+4250851 | MS.gene050738:CDS |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.3:-4252330 | None:intergenic |
| AATAGGGCATGAGTACCAGG+TGG | 0.731216 | 7.3:+4249900 | MS.gene050738:CDS |
| ACATCACAAGGGATTCTCGG+AGG | 0.749240 | 7.3:-4252319 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGATCATATAAAATTCA+TGG | + | chr7.3:4251316-4251335 | MS.gene050738:CDS | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | - | chr7.3:4251312-4251331 | None:intergenic | 15.0% |
| !! | AAAGATTGTATTATTTCACT+CGG | - | chr7.3:4250918-4250937 | None:intergenic | 20.0% |
| !! | AAGAAAAACCAAATAATCTT+TGG | - | chr7.3:4251063-4251082 | None:intergenic | 20.0% |
| !! | TGAAAATAGCAAAATGATAA+AGG | + | chr7.3:4252249-4252268 | MS.gene050738:CDS | 20.0% |
| !!! | ATATGTCTAAAAGCATTAAA+CGG | + | chr7.3:4251477-4251496 | MS.gene050738:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | - | chr7.3:4251060-4251079 | None:intergenic | 25.0% |
| ! | AATAGAGGTTCAAATAATCA+TGG | - | chr7.3:4250592-4250611 | None:intergenic | 25.0% |
| ! | ACTTTACTAACTGAATTTAC+AGG | - | chr7.3:4251404-4251423 | None:intergenic | 25.0% |
| ! | CTTTGTGTATATTTATACTC+AGG | + | chr7.3:4250689-4250708 | MS.gene050738:intron | 25.0% |
| ! | GAAATAATACAATCTTTGAC+CGG | + | chr7.3:4250921-4250940 | MS.gene050738:CDS | 25.0% |
| ! | GTATAAATATACACAAAGTG+AGG | - | chr7.3:4250687-4250706 | None:intergenic | 25.0% |
| ! | TAATTGGATCACAAACATTT+GGG | - | chr7.3:4252057-4252076 | None:intergenic | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | - | chr7.3:4250621-4250640 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | + | chr7.3:4250219-4250238 | MS.gene050738:CDS | 25.0% |
| !!! | ATCATATGCTTCTTTTTTAC+TGG | - | chr7.3:4251762-4251781 | None:intergenic | 25.0% |
| !!! | TACTTGGTTTGTTTATGTTT+GGG | + | chr7.3:4250148-4250167 | MS.gene050738:CDS | 25.0% |
| !!! | TATTTGGTTTTTCTTATTCC+TGG | + | chr7.3:4251068-4251087 | MS.gene050738:CDS | 25.0% |
| AATGAGAAAGAACCAGAAAA+GGG | + | chr7.3:4251224-4251243 | MS.gene050738:CDS | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | + | chr7.3:4250074-4250093 | MS.gene050738:CDS | 30.0% | |
| ATGCAGTTGATCCTATTAAA+AGG | + | chr7.3:4251915-4251934 | MS.gene050738:CDS | 30.0% | |
| ATTCTTAGAGAACAAATCGA+TGG | + | chr7.3:4250194-4250213 | MS.gene050738:CDS | 30.0% | |
| CAAATGTAATGATCTCTTCT+GGG | + | chr7.3:4250965-4250984 | MS.gene050738:CDS | 30.0% | |
| CAATAAAAGGATAACTCACT+CGG | - | chr7.3:4250562-4250581 | None:intergenic | 30.0% | |
| CAGATAAACTAGGAATTTCT+CGG | + | chr7.3:4252008-4252027 | MS.gene050738:CDS | 30.0% | |
| CATTATGTATCAATGTGACT+GGG | - | chr7.3:4250035-4250054 | None:intergenic | 30.0% | |
| CTAATTGGATCACAAACATT+TGG | - | chr7.3:4252058-4252077 | None:intergenic | 30.0% | |
| GGTGTGATGTAATGAAAAAA+AGG | - | chr7.3:4250627-4250646 | None:intergenic | 30.0% | |
| TCATGGTACATCACAATAAA+AGG | - | chr7.3:4250575-4250594 | None:intergenic | 30.0% | |
| TCATTATGTATCAATGTGAC+TGG | - | chr7.3:4250036-4250055 | None:intergenic | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | + | chr7.3:4251052-4251071 | MS.gene050738:CDS | 30.0% | |
| TTCTTAGAGAACAAATCGAT+GGG | + | chr7.3:4250195-4250214 | MS.gene050738:CDS | 30.0% | |
| TTGATACATAATGAAGAGTG+TGG | + | chr7.3:4250042-4250061 | MS.gene050738:CDS | 30.0% | |
| TTGATTATCATCAAACACAC+AGG | - | chr7.3:4251837-4251856 | None:intergenic | 30.0% | |
| ! | GATACACAAAGTTTTCTACT+TGG | + | chr7.3:4250132-4250151 | MS.gene050738:CDS | 30.0% |
| ! | TTGATGATAATCAAGTGAAG+AGG | + | chr7.3:4251843-4251862 | MS.gene050738:CDS | 30.0% |
| ! | TTGATTTGAGTCCTAGAATA+GGG | + | chr7.3:4249884-4249903 | MS.gene050738:CDS | 30.0% |
| ! | TTTTCTGTCAGAAAGTCTAT+TGG | - | chr7.3:4251531-4251550 | None:intergenic | 30.0% |
| !! | ATGAAAAAAAGGTACTGGTA+TGG | - | chr7.3:4250616-4250635 | None:intergenic | 30.0% |
| !! | CAAGAAGAAAAGCATTTGAT+TGG | + | chr7.3:4252580-4252599 | MS.gene050738:CDS | 30.0% |
| !! | CTACTTGGTTTGTTTATGTT+TGG | + | chr7.3:4250147-4250166 | MS.gene050738:CDS | 30.0% |
| !! | GAAAAAAGCATTTCCAATGA+CGG | + | chr7.3:4252142-4252161 | MS.gene050738:CDS | 30.0% |
| !! | TCTTCTTTGAAGTCTATTGT+TGG | + | chr7.3:4250759-4250778 | MS.gene050738:CDS | 30.0% |
| !! | TGAAAAAAAGGTACTGGTAT+GGG | - | chr7.3:4250615-4250634 | None:intergenic | 30.0% |
| !!! | TTGCTATTTTCAGAATTCGA+TGG | - | chr7.3:4252241-4252260 | None:intergenic | 30.0% |
| AAACATGAGATGAGATGAGA+TGG | - | chr7.3:4250424-4250443 | None:intergenic | 35.0% | |
| AAGGATTGAAAGGATCTTTG+TGG | - | chr7.3:4252486-4252505 | None:intergenic | 35.0% | |
| AGGATTGAAAGGATCTTTGT+GGG | - | chr7.3:4252485-4252504 | None:intergenic | 35.0% | |
| ATAATACAATCTTTGACCGG+AGG | + | chr7.3:4250924-4250943 | MS.gene050738:CDS | 35.0% | |
| ATCATTGAGAATTCTTCAGG+AGG | + | chr7.3:4251977-4251996 | MS.gene050738:CDS | 35.0% | |
| ATCGCAAGATACTTTGTTAC+AGG | + | chr7.3:4250386-4250405 | MS.gene050738:CDS | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | + | chr7.3:4251341-4251360 | MS.gene050738:CDS | 35.0% | |
| CAATCACTTTCCTTTGCAAT+TGG | + | chr7.3:4250000-4250019 | MS.gene050738:CDS | 35.0% | |
| CAATGAGAAAGAACCAGAAA+AGG | + | chr7.3:4251223-4251242 | MS.gene050738:CDS | 35.0% | |
| CAGTTGATCCTATTAAAAGG+AGG | + | chr7.3:4251918-4251937 | MS.gene050738:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | + | chr7.3:4251334-4251353 | MS.gene050738:CDS | 35.0% | |
| CCAAATGTAATGATCTCTTC+TGG | + | chr7.3:4250964-4250983 | MS.gene050738:CDS | 35.0% | |
| CCAGAAGAGATCATTACATT+TGG | - | chr7.3:4250967-4250986 | None:intergenic | 35.0% | |
| CTTTATTGTAGGTAGCAGAT+CGG | - | chr7.3:4251301-4251320 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | + | chr7.3:4251104-4251123 | MS.gene050738:CDS | 35.0% | |
| TCTGATTTCTTAAGCATGGA+AGG | - | chr7.3:4249931-4249950 | None:intergenic | 35.0% | |
| TCTTAGAGAACAAATCGATG+GGG | + | chr7.3:4250196-4250215 | MS.gene050738:CDS | 35.0% | |
| TGATACTGATGCAAACAAGA+TGG | + | chr7.3:4251787-4251806 | MS.gene050738:CDS | 35.0% | |
| TGCATCATTGAGAATTCTTC+AGG | + | chr7.3:4251974-4251993 | MS.gene050738:CDS | 35.0% | |
| TGGTCTTCATAGAGAAAGTA+AGG | + | chr7.3:4251622-4251641 | MS.gene050738:CDS | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | - | chr7.3:4251374-4251393 | None:intergenic | 35.0% | |
| TTGAAGTCTATTGTTGGACT+TGG | + | chr7.3:4250765-4250784 | MS.gene050738:CDS | 35.0% | |
| TTTATTGTAGGTAGCAGATC+GGG | - | chr7.3:4251300-4251319 | None:intergenic | 35.0% | |
| TTTGCTCAAGACATCACTAA+CGG | - | chr7.3:4251147-4251166 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | + | chr7.3:4250253-4250272 | MS.gene050738:CDS | 35.0% |
| ! | AATGAAGAGTGTGGATATCA+TGG | + | chr7.3:4250051-4250070 | MS.gene050738:CDS | 35.0% |
| ! | ACAGGACAGAAACTTTTTAC+TGG | + | chr7.3:4250312-4250331 | MS.gene050738:CDS | 35.0% |
| ! | CTTGATTTGAGTCCTAGAAT+AGG | + | chr7.3:4249883-4249902 | MS.gene050738:CDS | 35.0% |
| ! | GGAGAGTTTTACAAAACTGA+TGG | + | chr7.3:4250240-4250259 | MS.gene050738:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | - | chr7.3:4251929-4251948 | None:intergenic | 35.0% |
| ! | TCTTCATTTGATCCCTTTTC+TGG | - | chr7.3:4251239-4251258 | None:intergenic | 35.0% |
| ! | TGACTCTGCTGATTACTAAT+TGG | - | chr7.3:4252073-4252092 | None:intergenic | 35.0% |
| ! | TTTTAGACATATCCTTGCCA+TGG | - | chr7.3:4251469-4251488 | None:intergenic | 35.0% |
| !! | CATGTATTGATTACCGTCAT+TGG | - | chr7.3:4252158-4252177 | None:intergenic | 35.0% |
| !! | CTATTCTAGGACTCAAATCA+AGG | - | chr7.3:4249885-4249904 | None:intergenic | 35.0% |
| !! | GAAAAGCATTTGATTGGAGA+TGG | + | chr7.3:4252586-4252605 | MS.gene050738:CDS | 35.0% |
| AACTGATGATTCGCCAATGA+TGG | + | chr7.3:4251655-4251674 | MS.gene050738:CDS | 40.0% | |
| AAGAGAGACCTTACTAGGTT+TGG | + | chr7.3:4250822-4250841 | MS.gene050738:CDS | 40.0% | |
| AATAAAACCAACAGTCGCAG+AGG | + | chr7.3:4251716-4251735 | MS.gene050738:CDS | 40.0% | |
| AATCTTTGACCGGAGGATTT+CGG | + | chr7.3:4250931-4250950 | MS.gene050738:CDS | 40.0% | |
| ATCGTCATTGTTCAGATCAC+GGG | + | chr7.3:4252542-4252561 | MS.gene050738:CDS | 40.0% | |
| ATCTTAGCTTCCACCATCAT+TGG | - | chr7.3:4251671-4251690 | None:intergenic | 40.0% | |
| ATGTATCAATGTGACTGGGA+TGG | - | chr7.3:4250031-4250050 | None:intergenic | 40.0% | |
| CATACGAGGAAAGTAAACCA+TGG | + | chr7.3:4251449-4251468 | MS.gene050738:CDS | 40.0% | |
| CATCGTCATTGTTCAGATCA+CGG | + | chr7.3:4252541-4252560 | MS.gene050738:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | - | chr7.3:4252333-4252352 | None:intergenic | 40.0% | |
| CTCGAAGAAGAAGCTAAAGT+TGG | + | chr7.3:4251194-4251213 | MS.gene050738:CDS | 40.0% | |
| CTGCTCTGATTTCTTAAGCA+TGG | - | chr7.3:4249935-4249954 | None:intergenic | 40.0% | |
| CTGCTGGTAAAAAACATACG+AGG | + | chr7.3:4251435-4251454 | MS.gene050738:CDS | 40.0% | |
| CTTAGAGAACAAATCGATGG+GGG | + | chr7.3:4250197-4250216 | MS.gene050738:CDS | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | - | chr7.3:4251089-4251108 | None:intergenic | 40.0% | |
| GAAGACAAAGCTTTGCAATG+TGG | - | chr7.3:4250888-4250907 | None:intergenic | 40.0% | |
| GACAAAAGTTCTTGTTGCCT+CGG | - | chr7.3:4250339-4250358 | None:intergenic | 40.0% | |
| GCTCTGTGCATTTGATACAA+TGG | + | chr7.3:4250519-4250538 | MS.gene050738:intron | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | - | chr7.3:4251038-4251057 | None:intergenic | 40.0% | |
| TCAGGTGTCTAAGTCATTTG+TGG | + | chr7.3:4250707-4250726 | MS.gene050738:intron | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | - | chr7.3:4252334-4252353 | None:intergenic | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | - | chr7.3:4252403-4252422 | None:intergenic | 40.0% | |
| TCTTCGAGCACGAGAATATT+AGG | - | chr7.3:4251182-4251201 | None:intergenic | 40.0% | |
| TGGATCACAAACATTTGGGT+TGG | - | chr7.3:4252053-4252072 | None:intergenic | 40.0% | |
| TGTATCAATGTGACTGGGAT+GGG | - | chr7.3:4250030-4250049 | None:intergenic | 40.0% | |
| TGTCTCCTGGGATTTATATC+AGG | - | chr7.3:4252364-4252383 | None:intergenic | 40.0% | |
| TTATTGTAGGTAGCAGATCG+GGG | - | chr7.3:4251299-4251318 | None:intergenic | 40.0% | |
| TTTCAGTTTCAACATGCCTC+AGG | + | chr7.3:4252213-4252232 | MS.gene050738:CDS | 40.0% | |
| ! | AGAAACTTTTTACTGGACCG+AGG | + | chr7.3:4250319-4250338 | MS.gene050738:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | + | chr7.3:4250257-4250276 | MS.gene050738:CDS | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | + | chr7.3:4250891-4250910 | MS.gene050738:CDS | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | + | chr7.3:4251419-4251438 | MS.gene050738:CDS | 40.0% |
| !! | AGGAGCATCTTCTGATTCAA+CGG | - | chr7.3:4251591-4251610 | None:intergenic | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | + | chr7.3:4251087-4251106 | MS.gene050738:CDS | 40.0% |
| !!! | CACAGGCGTGTTGATTTTTA+TGG | - | chr7.3:4251820-4251839 | None:intergenic | 40.0% |
| AATTCATGTCAATTGGCCCC+TGG | + | chr7.3:4250081-4250100 | MS.gene050738:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | + | chr7.3:4252399-4252418 | MS.gene050738:CDS | 45.0% | |
| ACCTGATCTTACTCTCCGAT+TGG | - | chr7.3:4251885-4251904 | None:intergenic | 45.0% | |
| AGGAGAAGAGAGACCTTACT+AGG | + | chr7.3:4250817-4250836 | MS.gene050738:CDS | 45.0% | |
| CCAACATCACAAGGGATTCT+CGG | - | chr7.3:4252325-4252344 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | + | chr7.3:4251364-4251383 | MS.gene050738:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | + | chr7.3:4250792-4250811 | MS.gene050738:CDS | 45.0% | |
| GACAGCCTGATATAAATCCC+AGG | + | chr7.3:4252356-4252375 | MS.gene050738:CDS | 45.0% | |
| GAGAATTCTTCAGGAGGTCT+GGG | + | chr7.3:4251983-4252002 | MS.gene050738:CDS | 45.0% | |
| GAGATTGACTGATTGTGCCA+AGG | + | chr7.3:4251940-4251959 | MS.gene050738:CDS | 45.0% | |
| GAGGAAAGTAAACCATGGCA+AGG | + | chr7.3:4251454-4251473 | MS.gene050738:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | + | chr7.3:4251344-4251363 | MS.gene050738:CDS | 45.0% | |
| GATGGGTAAGCCAATTGCAA+AGG | - | chr7.3:4250013-4250032 | None:intergenic | 45.0% | |
| GGTGTCTAAGTCATTTGTGG+AGG | + | chr7.3:4250710-4250729 | MS.gene050738:intron | 45.0% | |
| GTTCGACACCAAACCTAGTA+AGG | - | chr7.3:4250833-4250852 | None:intergenic | 45.0% | |
| TAGAATAGGGCATGAGTACC+AGG | + | chr7.3:4249897-4249916 | MS.gene050738:CDS | 45.0% | |
| TCAGAATTCGATGGAACCTG+AGG | - | chr7.3:4252232-4252251 | None:intergenic | 45.0% | |
| TCCAATCGGAGAGTAAGATC+AGG | + | chr7.3:4251881-4251900 | MS.gene050738:CDS | 45.0% | |
| TGAAAGGATCTTTGTGGGTC+TGG | - | chr7.3:4252480-4252499 | None:intergenic | 45.0% | |
| TGAAGACCAGTAGTAGCAGT+AGG | - | chr7.3:4251611-4251630 | None:intergenic | 45.0% | |
| TGAGAATTCTTCAGGAGGTC+TGG | + | chr7.3:4251982-4252001 | MS.gene050738:CDS | 45.0% | |
| TGATGATTCGCCAATGATGG+TGG | + | chr7.3:4251658-4251677 | MS.gene050738:CDS | 45.0% | |
| TGGTACTCATGCCCTATTCT+AGG | - | chr7.3:4249898-4249917 | None:intergenic | 45.0% | |
| TTCTTCAGCAGACAGAAGCT+TGG | + | chr7.3:4252105-4252124 | MS.gene050738:CDS | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | + | chr7.3:4250976-4250995 | MS.gene050738:CDS | 45.0% |
| ! | GATGCAGCTTTTCTCTTCCT+TGG | - | chr7.3:4251960-4251979 | None:intergenic | 45.0% |
| ! | GGAGCATCTTCTGATTCAAC+GGG | - | chr7.3:4251590-4251609 | None:intergenic | 45.0% |
| ! | GGTCTGGGATCAGATAAACT+AGG | + | chr7.3:4251998-4252017 | MS.gene050738:CDS | 45.0% |
| ! | TCACGAAGCATCAGTCCAAT+CGG | + | chr7.3:4251867-4251886 | MS.gene050738:CDS | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+GGG | - | chr7.3:4252376-4252395 | None:intergenic | 45.0% |
| !! | AGGTACTGGTATGGGAATAG+AGG | - | chr7.3:4250607-4250626 | None:intergenic | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | + | chr7.3:4252330-4252349 | MS.gene050738:CDS | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | + | chr7.3:4250797-4250816 | MS.gene050738:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | + | chr7.3:4251026-4251045 | MS.gene050738:CDS | 45.0% |
| !! | TGTTGGACTTGGTGTTCTTG+TGG | + | chr7.3:4250776-4250795 | MS.gene050738:CDS | 45.0% |
| AAAGGGGGGAAACGTATGAC+AGG | + | chr7.3:4250294-4250313 | MS.gene050738:CDS | 50.0% | |
| AACCTGGGAAGAACAGTCGT+GGG | + | chr7.3:4250850-4250869 | MS.gene050738:CDS | 50.0% | |
| AATAGGGCATGAGTACCAGG+TGG | + | chr7.3:4249900-4249919 | MS.gene050738:CDS | 50.0% | |
| ACATCACAAGGGATTCTCGG+AGG | - | chr7.3:4252322-4252341 | None:intergenic | 50.0% | |
| AGACAGAAGCTTGGAAGAGG+AGG | + | chr7.3:4252114-4252133 | MS.gene050738:CDS | 50.0% | |
| AGATACACCTCTGCGACTGT+TGG | - | chr7.3:4251726-4251745 | None:intergenic | 50.0% | |
| AGCAGACAGAAGCTTGGAAG+AGG | + | chr7.3:4252111-4252130 | MS.gene050738:CDS | 50.0% | |
| AGGAGCTACTCAATCTGCCA+GGG | - | chr7.3:4250101-4250120 | None:intergenic | 50.0% | |
| AGTGCAGGAGGAAAAAAGGG+GGG | + | chr7.3:4250280-4250299 | MS.gene050738:CDS | 50.0% | |
| ATGGAGCATGCGTCTCATGA+AGG | + | chr7.3:4249859-4249878 | MS.gene050738:CDS | 50.0% | |
| ATGTCTAACAGCTGCCACTC+AGG | + | chr7.3:4252282-4252301 | MS.gene050738:CDS | 50.0% | |
| CAACCTCTTGCCAATAAGCG+GGG | - | chr7.3:4251002-4251021 | None:intergenic | 50.0% | |
| CACACACACACACACACAAC+TGG | - | chr7.3:4250648-4250667 | None:intergenic | 50.0% | |
| CCAACCTCTTGCCAATAAGC+GGG | - | chr7.3:4251003-4251022 | None:intergenic | 50.0% | |
| CCGAGAATCCCTTGTGATGT+TGG | + | chr7.3:4252322-4252341 | MS.gene050738:CDS | 50.0% | |
| CGGAGTGCAGGAGGAAAAAA+GGG | + | chr7.3:4250277-4250296 | MS.gene050738:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | - | chr7.3:4252299-4252318 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | - | chr7.3:4251351-4251370 | None:intergenic | 50.0% | |
| GAGTGCAGGAGGAAAAAAGG+GGG | + | chr7.3:4250279-4250298 | MS.gene050738:CDS | 50.0% | |
| GATGCTCCTACTGCTACTAC+TGG | + | chr7.3:4251602-4251621 | MS.gene050738:CDS | 50.0% | |
| GCATCTTCTGATTCAACGGG+CGG | - | chr7.3:4251587-4251606 | None:intergenic | 50.0% | |
| GCATGGAAGGAATTTCCACC+TGG | - | chr7.3:4249918-4249937 | None:intergenic | 50.0% | |
| GCCAACCTCTTGCCAATAAG+CGG | - | chr7.3:4251004-4251023 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | + | chr7.3:4251363-4251382 | MS.gene050738:CDS | 50.0% | |
| GGAGTGCAGGAGGAAAAAAG+GGG | + | chr7.3:4250278-4250297 | MS.gene050738:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | + | chr7.3:4250786-4250805 | MS.gene050738:CDS | 50.0% | |
| TCCTTTCAATCCTTGCCGCA+AGG | + | chr7.3:4252492-4252511 | MS.gene050738:CDS | 50.0% | |
| TCGGAGTGCAGGAGGAAAAA+AGG | + | chr7.3:4250276-4250295 | MS.gene050738:CDS | 50.0% | |
| TGAGTGGCAGCTGTTAGACA+TGG | - | chr7.3:4252283-4252302 | None:intergenic | 50.0% | |
| TGCACAGCTTCTGAATCAGC+AGG | - | chr7.3:4249976-4249995 | None:intergenic | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | + | chr7.3:4252294-4252313 | MS.gene050738:CDS | 50.0% | |
| TTGTGTATCCGCATCACTCC+AGG | - | chr7.3:4250121-4250140 | None:intergenic | 50.0% | |
| TTTGCTCAGCCGAAATCCTC+CGG | - | chr7.3:4250943-4250962 | None:intergenic | 50.0% | |
| ! | CGCAGAGGTGTATCTAACTG+TGG | + | chr7.3:4251731-4251750 | MS.gene050738:CDS | 50.0% |
| ! | TGCCTTTTGTTCGAGCCTTG+CGG | - | chr7.3:4252510-4252529 | None:intergenic | 50.0% |
| !! | ACTAGGTTTGGTGTCGAACC+TGG | + | chr7.3:4250834-4250853 | MS.gene050738:CDS | 50.0% |
| !! | CTAGGTTTGGTGTCGAACCT+GGG | + | chr7.3:4250835-4250854 | MS.gene050738:CDS | 50.0% |
| !! | GTTTCTAGTGCTCTGTCTCC+TGG | - | chr7.3:4252377-4252396 | None:intergenic | 50.0% |
| ACCTGGGAAGAACAGTCGTG+GGG | + | chr7.3:4250851-4250870 | MS.gene050738:CDS | 55.0% | |
| AGCTGTTTGGCCCCGCTTAT+TGG | + | chr7.3:4250989-4251008 | MS.gene050738:CDS | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | + | chr7.3:4250265-4250284 | MS.gene050738:CDS | 55.0% | |
| CAGGAGCTACTCAATCTGCC+AGG | - | chr7.3:4250102-4250121 | None:intergenic | 55.0% | |
| CCCGCTTATTGGCAAGAGGT+TGG | + | chr7.3:4251000-4251019 | MS.gene050738:CDS | 55.0% | |
| CTGGCAGATTGAGTAGCTCC+TGG | + | chr7.3:4250100-4250119 | MS.gene050738:CDS | 55.0% | |
| GAACCTGGGAAGAACAGTCG+TGG | + | chr7.3:4250849-4250868 | MS.gene050738:CDS | 55.0% | |
| GAGTAGCTCCTGGAGTGATG+CGG | + | chr7.3:4250110-4250129 | MS.gene050738:CDS | 55.0% | |
| GCCTTGCGGCAAGGATTGAA+AGG | - | chr7.3:4252496-4252515 | None:intergenic | 55.0% | |
| GGAGCTACTCAATCTGCCAG+GGG | - | chr7.3:4250100-4250119 | None:intergenic | 55.0% | |
| TGCCGCAAGGCTCGAACAAA+AGG | + | chr7.3:4252505-4252524 | MS.gene050738:CDS | 55.0% | |
| TTTGTTCGAGCCTTGCGGCA+AGG | - | chr7.3:4252505-4252524 | None:intergenic | 55.0% | |
| AGGTAGCAGATCGGGGCTTG+AGG | - | chr7.3:4251292-4251311 | None:intergenic | 60.0% | |
| GTAGATGGTCGGAGTGCAGG+AGG | + | chr7.3:4250268-4250287 | MS.gene050738:CDS | 60.0% | |
| TGGCCCCGCTTATTGGCAAG+AGG | + | chr7.3:4250996-4251015 | MS.gene050738:CDS | 60.0% | |
| GCCCCACGACTGTTCTTCCC+AGG | - | chr7.3:4250855-4250874 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4249859 | 4252621 | 4249859 | ID=MS.gene050738 |
| chr7.3 | mRNA | 4249859 | 4252621 | 4249859 | ID=MS.gene050738.t1;Parent=MS.gene050738 |
| chr7.3 | exon | 4249859 | 4250407 | 4249859 | ID=MS.gene050738.t1.exon1;Parent=MS.gene050738.t1 |
| chr7.3 | CDS | 4249859 | 4250407 | 4249859 | ID=cds.MS.gene050738.t1;Parent=MS.gene050738.t1 |
| chr7.3 | exon | 4250711 | 4252621 | 4250711 | ID=MS.gene050738.t1.exon2;Parent=MS.gene050738.t1 |
| chr7.3 | CDS | 4250711 | 4252621 | 4250711 | ID=cds.MS.gene050738.t1;Parent=MS.gene050738.t1 |
| Gene Sequence |
| Protein sequence |
