Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67159.t1 | XP_013467079.1 | 85.1 | 843 | 118 | 3 | 1 | 839 | 1 | 839 | 0.00E+00 | 1377.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67159.t1 | A0A072VGE3 | 85.1 | 843 | 118 | 3 | 1 | 839 | 1 | 839 | 0.0e+00 | 1377.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049669 | MS.gene67159 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene67159 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene67159 | 0.817189 | 3.75E-52 | -1.69E-46 |
| MS.gene051926 | MS.gene67159 | -0.802758 | 4.82E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene67159 | 0.811808 | 5.82E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene67159 | 0.814705 | 1.34E-51 | -1.69E-46 |
| MS.gene053360 | MS.gene67159 | 0.908672 | 1.32E-81 | -1.69E-46 |
| MS.gene05414 | MS.gene67159 | 0.806256 | 8.99E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene67159 | 0.825985 | 3.48E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene67159 | 0.810435 | 1.15E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene67159 | 0.818541 | 1.86E-52 | -1.69E-46 |
| MS.gene057156 | MS.gene67159 | -0.835853 | 1.32E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene67159 | 0.800463 | 1.42E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78587 | MS.gene67159 | PPI |
| MS.gene67159 | MS.gene78588 | PPI |
| MS.gene67159 | MS.gene054416 | PPI |
| MS.gene67159 | MS.gene65461 | PPI |
| MS.gene67159 | MS.gene78587 | PPI |
| MS.gene67159 | MS.gene29351 | PPI |
| MS.gene67159 | MS.gene050890 | PPI |
| MS.gene67159 | MS.gene050893 | PPI |
| MS.gene67159 | MS.gene050738 | PPI |
| MS.gene67159 | MS.gene050889 | PPI |
| MS.gene67159 | MS.gene053360 | PPI |
| MS.gene67159 | MS.gene072484 | PPI |
| MS.gene67159 | MS.gene78586 | PPI |
| MS.gene67159 | MS.gene072485 | PPI |
| MS.gene67159 | MS.gene78585 | PPI |
| MS.gene67159 | MS.gene050892 | PPI |
| MS.gene67159 | MS.gene78584 | PPI |
| MS.gene072481 | MS.gene67159 | PPI |
| MS.gene67159 | MS.gene050942 | PPI |
| MS.gene67159 | MS.gene29350 | PPI |
| MS.gene050738 | MS.gene67159 | PPI |
| MS.gene67159 | MS.gene050891 | PPI |
| MS.gene67159 | MS.gene063225 | PPI |
| MS.gene67159 | MS.gene072482 | PPI |
| MS.gene67159 | MS.gene072483 | PPI |
| MS.gene67159 | MS.gene072542 | PPI |
| MS.gene67159 | MS.gene072481 | PPI |
| MS.gene67159 | MS.gene29352 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67159.t1 | MTR_1g041895 | 90.154 | 843 | 75 | 3 | 1 | 839 | 1 | 839 | 0.0 | 1522 |
| MS.gene67159.t1 | MTR_7g113270 | 69.485 | 816 | 181 | 12 | 1 | 807 | 1 | 757 | 0.0 | 1019 |
| MS.gene67159.t1 | MTR_7g113280 | 67.375 | 800 | 204 | 8 | 1 | 791 | 1 | 752 | 0.0 | 1006 |
| MS.gene67159.t1 | MTR_7g113220 | 68.627 | 816 | 184 | 12 | 1 | 807 | 1 | 753 | 0.0 | 1003 |
| MS.gene67159.t1 | MTR_7g112390 | 56.611 | 779 | 191 | 12 | 131 | 837 | 1 | 704 | 0.0 | 734 |
| MS.gene67159.t1 | MTR_7g113250 | 72.826 | 460 | 96 | 3 | 13 | 470 | 1 | 433 | 0.0 | 654 |
| MS.gene67159.t1 | MTR_7g113250 | 63.317 | 199 | 64 | 3 | 634 | 826 | 436 | 631 | 9.16e-66 | 231 |
| MS.gene67159.t1 | MTR_7g108470 | 42.348 | 477 | 214 | 9 | 4 | 426 | 6 | 475 | 1.05e-112 | 366 |
| MS.gene67159.t1 | MTR_4g119630 | 46.049 | 367 | 173 | 6 | 22 | 372 | 40 | 397 | 1.81e-96 | 309 |
| MS.gene67159.t1 | MTR_3g049350 | 66.972 | 218 | 54 | 2 | 304 | 519 | 3 | 204 | 1.67e-83 | 268 |
| MS.gene67159.t1 | MTR_3g049350 | 60.000 | 75 | 29 | 1 | 634 | 708 | 174 | 247 | 1.28e-19 | 90.1 |
| MS.gene67159.t1 | MTR_2g436970 | 37.651 | 332 | 165 | 10 | 26 | 355 | 17 | 308 | 6.82e-61 | 213 |
| MS.gene67159.t1 | MTR_7g113290 | 74.359 | 117 | 29 | 1 | 568 | 684 | 10 | 125 | 1.83e-43 | 160 |
| MS.gene67159.t1 | MTR_4g119640 | 31.200 | 125 | 57 | 3 | 31 | 144 | 27 | 133 | 1.75e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67159.t1 | AT1G09040 | 44.966 | 447 | 194 | 7 | 23 | 424 | 35 | 474 | 4.23e-112 | 364 |
| MS.gene67159.t1 | AT1G09050 | 44.072 | 447 | 198 | 7 | 23 | 424 | 35 | 474 | 5.77e-108 | 353 |
| MS.gene67159.t1 | AT1G09050 | 44.072 | 447 | 198 | 7 | 23 | 424 | 35 | 474 | 5.77e-108 | 353 |
| MS.gene67159.t1 | AT2G47820 | 41.328 | 467 | 216 | 10 | 18 | 433 | 30 | 489 | 1.43e-103 | 338 |
| MS.gene67159.t1 | AT2G47820 | 41.328 | 467 | 216 | 10 | 18 | 433 | 30 | 489 | 1.43e-103 | 338 |
| MS.gene67159.t1 | AT1G55050 | 42.825 | 446 | 201 | 9 | 26 | 433 | 27 | 456 | 1.27e-95 | 320 |
| MS.gene67159.t1 | AT1G55050 | 42.825 | 446 | 201 | 9 | 26 | 433 | 27 | 456 | 1.27e-95 | 320 |
Find 177 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCATTTGATCCCCTTTC+TGG | 0.053065 | 1.2:+26491293 | None:intergenic |
| TGAGGAGCCTGTTGGTTATT+TGG | 0.173412 | 1.2:-26490181 | MS.gene67159:CDS |
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 1.2:-26491477 | MS.gene67159:CDS |
| CGATTCTGCTGATGACTAAT+TGG | 0.221295 | 1.2:+26490453 | None:intergenic |
| ATACAGTTGTTCCTATTAAA+AGG | 0.233999 | 1.2:-26490608 | MS.gene67159:CDS |
| ACGTTGTTGCATTCTGTTTA+GGG | 0.255308 | 1.2:+26491024 | None:intergenic |
| CGCATTGTTGAGAATTCTTC+AGG | 0.256639 | 1.2:-26490549 | MS.gene67159:CDS |
| CCAAATGTAACGATCTCTTC+TGG | 0.272360 | 1.2:-26491565 | MS.gene67159:CDS |
| TCCTCGAGCACGAGAATATT+CGG | 0.276731 | 1.2:+26491350 | None:intergenic |
| AGCTGTTTGGCCCCGCTTAC+TGG | 0.290051 | 1.2:-26491540 | MS.gene67159:CDS |
| GTAACATAGCCTCGATTCTT+TGG | 0.306244 | 1.2:+26491494 | None:intergenic |
| ATCGCAAGATACTTTGTTAC+AGG | 0.312695 | 1.2:-26492087 | MS.gene67159:intron |
| TGATGCTTTATGATCCTCTT+TGG | 0.320294 | 1.2:+26490666 | None:intergenic |
| TAAAGATTGTATAAAGTTCA+TGG | 0.326893 | 1.2:-26491213 | MS.gene67159:CDS |
| TTTCTAGTGCTTTGTCTCCT+AGG | 0.328216 | 1.2:+26490132 | None:intergenic |
| AACGTTGTTGCATTCTGTTT+AGG | 0.332484 | 1.2:+26491023 | None:intergenic |
| TCCTTCCATGCTTAGGAAAT+CGG | 0.340779 | 1.2:-26492546 | MS.gene67159:CDS |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 1.2:-26491166 | MS.gene67159:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.348937 | 1.2:-26491553 | MS.gene67159:CDS |
| ACTTTACTCACTGAATTAAC+AGG | 0.353037 | 1.2:+26491128 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.354435 | 1.2:-26491638 | MS.gene67159:CDS |
| CTTCTTTGAAGTCTATTGTT+GGG | 0.354909 | 1.2:-26491769 | MS.gene67159:CDS |
| TGGTACTCATGACCTATTCT+AGG | 0.356098 | 1.2:+26492578 | None:intergenic |
| AATCTTTGACTGGAGGGTTT+CGG | 0.356679 | 1.2:-26491598 | MS.gene67159:CDS |
| CCACAACGACTACTGGTCTT+TGG | 0.359141 | 1.2:-26490905 | MS.gene67159:CDS |
| CTAATTGGATCACAAACAAT+TGG | 0.362277 | 1.2:+26490468 | None:intergenic |
| CTTTATACAATCTTTATTGT+AGG | 0.364885 | 1.2:+26491220 | None:intergenic |
| TTGAAGTCTATTGTTGGGCT+TGG | 0.375908 | 1.2:-26491764 | MS.gene67159:CDS |
| TCTTCTTTGAAGTCTATTGT+TGG | 0.379550 | 1.2:-26491770 | MS.gene67159:CDS |
| TGAAAGGATCTTTGTGTGTC+TGG | 0.380371 | 1.2:+26490028 | None:intergenic |
| AAATCACTTTCCTTTGCAAT+TGG | 0.386218 | 1.2:-26492473 | MS.gene67159:CDS |
| TTTCATCATCCTCCTCTGCC+AGG | 0.392167 | 1.2:+26490400 | None:intergenic |
| CCAGAAGAGATCGTTACATT+TGG | 0.393588 | 1.2:+26491565 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.395919 | 1.2:-26491195 | MS.gene67159:CDS |
| CACAGGCGTGTTGATTTCTC+TGG | 0.401071 | 1.2:+26490706 | None:intergenic |
| AACTTATGATTCACCAAAGA+TGG | 0.407799 | 1.2:-26490859 | MS.gene67159:CDS |
| CATCATCATTGTTCAGATCA+TGG | 0.417596 | 1.2:-26489964 | MS.gene67159:CDS |
| TTGGCAGATGTTGTCCTTTG+AGG | 0.417875 | 1.2:-26492657 | None:intergenic |
| CTTTCACTTAGAACGAATCT+TGG | 0.419928 | 1.2:-26492518 | MS.gene67159:CDS |
| CAGAAATTCCTTCCATGCTT+AGG | 0.420911 | 1.2:-26492553 | MS.gene67159:CDS |
| TGGCAATGGCGGAGGAAGGC+GGG | 0.427130 | 1.2:-26490257 | MS.gene67159:CDS |
| TGGTCTTTGGAGAGAAAGTA+AGG | 0.431040 | 1.2:-26490892 | MS.gene67159:CDS |
| TTTATTGTAGGAAGAAGATC+GGG | 0.433582 | 1.2:+26491232 | None:intergenic |
| AAAGTATCTTGCGATTCTTC+AGG | 0.435378 | 1.2:+26492095 | None:intergenic |
| AGACATCAATTCATGTCAAT+TGG | 0.437759 | 1.2:-26492399 | MS.gene67159:CDS |
| TGCCGAATTGCTCGAACAAA+AGG | 0.439726 | 1.2:-26490000 | MS.gene67159:CDS |
| CAAATGTAACGATCTCTTCT+GGG | 0.441362 | 1.2:-26491564 | MS.gene67159:CDS |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 1.2:-26491737 | MS.gene67159:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 1.2:+26491158 | None:intergenic |
| AAGGGAGGGAAACGTATGAT+AGG | 0.460668 | 1.2:-26492179 | MS.gene67159:CDS |
| TTCTGACGGAAAAGTATTGA+AGG | 0.461870 | 1.2:-26490976 | MS.gene67159:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 1.2:+26491181 | None:intergenic |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 1.2:-26492422 | MS.gene67159:CDS |
| CCAACCTCTTGCCAGTAAGC+GGG | 0.472085 | 1.2:+26491529 | None:intergenic |
| TTTCAGTTTCAACATGCCTC+AGG | 0.472552 | 1.2:-26490310 | MS.gene67159:CDS |
| GGAGCATCTTCTAATTCAAC+TGG | 0.473411 | 1.2:+26490927 | None:intergenic |
| GCCAACCTCTTGCCAGTAAG+CGG | 0.473500 | 1.2:+26491528 | None:intergenic |
| ATGGCAATGGCGGAGGAAGG+CGG | 0.478889 | 1.2:-26490258 | MS.gene67159:CDS |
| CTTGATTTGAGTCCTAGAAT+AGG | 0.483633 | 1.2:-26492590 | MS.gene67159:CDS |
| TCATTATGTATCCATGTGAC+TGG | 0.486359 | 1.2:+26492440 | None:intergenic |
| GAAGACAAAGCTTTGCAAGT+TGG | 0.488718 | 1.2:+26491644 | None:intergenic |
| CTCGAAAACTTCTCAACACC+GGG | 0.489787 | 1.2:+26491443 | None:intergenic |
| TAATTGGATCACAAACAATT+GGG | 0.490571 | 1.2:+26490469 | None:intergenic |
| TTCTGAAAATAGCAAAATGA+TGG | 0.492251 | 1.2:-26490277 | MS.gene67159:CDS |
| TCATAAAGCATCAGTTCAAT+CGG | 0.495370 | 1.2:-26490656 | MS.gene67159:CDS |
| GATGCTCCCACAACGACTAC+TGG | 0.495943 | 1.2:-26490912 | MS.gene67159:CDS |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 1.2:-26491188 | MS.gene67159:CDS |
| CTTTATTGTAGGAAGAAGAT+CGG | 0.498545 | 1.2:+26491231 | None:intergenic |
| GCTCGACACCAAGCCTAGTA+AGG | 0.499492 | 1.2:+26491699 | None:intergenic |
| ATCGTAGATGGTCAGAGTGC+AGG | 0.501650 | 1.2:-26492208 | MS.gene67159:CDS |
| TCTTAGATAACAAGCGGATG+GGG | 0.502626 | 1.2:-26492277 | MS.gene67159:CDS |
| TGTTGGGCTTGGTGTTCTTG+TGG | 0.505949 | 1.2:-26491753 | MS.gene67159:CDS |
| GGAAGGCGGGCAACACCTAA+AGG | 0.506307 | 1.2:-26490244 | MS.gene67159:CDS |
| AGACAGAAGCCTGGCAGAGG+AGG | 0.508502 | 1.2:-26490409 | MS.gene67159:CDS |
| CTGGCCGATTGAGTATCTCC+TGG | 0.508654 | 1.2:-26492373 | MS.gene67159:CDS |
| AAACAGATGGATATCGTAGA+TGG | 0.508693 | 1.2:-26492220 | MS.gene67159:CDS |
| CAGGAGATACTCAATCGGCC+AGG | 0.511282 | 1.2:+26492374 | None:intergenic |
| CCCGCTTACTGGCAAGAGGT+TGG | 0.511676 | 1.2:-26491529 | MS.gene67159:CDS |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.513384 | 1.2:-26491743 | MS.gene67159:CDS |
| AGGAGAAGAGAGACCTTACT+AGG | 0.516287 | 1.2:-26491712 | MS.gene67159:CDS |
| GACAAAAGTTCATGTTGCCT+CGG | 0.517703 | 1.2:+26492137 | None:intergenic |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 1.2:-26490106 | MS.gene67159:CDS |
| TAATGAGGAAGGGCCAGAAA+GGG | 0.523242 | 1.2:-26491306 | MS.gene67159:CDS |
| TGGATCACAAACAATTGGGT+TGG | 0.524562 | 1.2:+26490473 | None:intergenic |
| ATCATCATTGTTCAGATCAT+GGG | 0.526314 | 1.2:-26489963 | MS.gene67159:CDS |
| AAGAGAGACCTTACTAGGCT+TGG | 0.528520 | 1.2:-26491707 | MS.gene67159:CDS |
| TTCTTAGATAACAAGCGGAT+GGG | 0.531523 | 1.2:-26492278 | MS.gene67159:CDS |
| GAGAATTCTTCAGGAGGTGT+GGG | 0.536899 | 1.2:-26490540 | MS.gene67159:CDS |
| CAAAGACCAGTAGTCGTTGT+GGG | 0.539657 | 1.2:+26490906 | None:intergenic |
| TGAGAATTCTTCAGGAGGTG+TGG | 0.539949 | 1.2:-26490541 | MS.gene67159:CDS |
| GTTGGTAACTGTAATGAGGA+AGG | 0.540015 | 1.2:-26491317 | MS.gene67159:CDS |
| GATATAATACAATCTTTGAC+TGG | 0.540698 | 1.2:-26491608 | MS.gene67159:CDS |
| CAAAATGATGGCAATGGCGG+AGG | 0.541360 | 1.2:-26490265 | MS.gene67159:CDS |
| AGGAGATACTCAATCGGCCA+GGG | 0.541506 | 1.2:+26492375 | None:intergenic |
| CTCGAGGAAGAAGCTAAAGT+TGG | 0.542576 | 1.2:-26491335 | MS.gene67159:CDS |
| CTATTCTAGGACTCAAATCA+AGG | 0.544855 | 1.2:+26492591 | None:intergenic |
| AGCAGACAGAAGCCTGGCAG+AGG | 0.545137 | 1.2:-26490412 | MS.gene67159:CDS |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.548825 | 1.2:-26490199 | MS.gene67159:CDS |
| GCCTTACGACTGTTCTTCAC+AGG | 0.550268 | 1.2:+26491677 | None:intergenic |
| TAGAATAGGTCATGAGTACC+AGG | 0.551326 | 1.2:-26492576 | MS.gene67159:CDS |
| ATCATCATCATTCTCCTCAA+AGG | 0.552364 | 1.2:+26492643 | None:intergenic |
| CGATAATGATGCAAACAAGA+TGG | 0.552574 | 1.2:-26490736 | MS.gene67159:CDS |
| TTCTTCAGCAGACAGAAGCC+TGG | 0.554193 | 1.2:-26490418 | MS.gene67159:CDS |
| CTGCTCCGATTTCCTAAGCA+TGG | 0.556683 | 1.2:+26492541 | None:intergenic |
| TAATACAATCTTTGACTGGA+GGG | 0.558243 | 1.2:-26491604 | MS.gene67159:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 1.2:-26491165 | MS.gene67159:CDS |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 1.2:-26491732 | MS.gene67159:CDS |
| GCAATTCGGCAAGGATTGAA+AGG | 0.561447 | 1.2:+26490012 | None:intergenic |
| TGGCCCCGCTTACTGGCAAG+AGG | 0.562669 | 1.2:-26491533 | MS.gene67159:CDS |
| AATTCATGTCAATTGGCCCC+TGG | 0.568515 | 1.2:-26492392 | MS.gene67159:CDS |
| TCAGGTTTCTAAGTCATATG+TGG | 0.571418 | 1.2:-26491822 | MS.gene67159:intron |
| CTCAGCGTGACATAAATCCT+AGG | 0.572046 | 1.2:-26490149 | MS.gene67159:CDS |
| TAAAGTTGGTAACTGTAATG+AGG | 0.572386 | 1.2:-26491321 | MS.gene67159:CDS |
| GTAATGAGGAAGGGCCAGAA+AGG | 0.573026 | 1.2:-26491307 | MS.gene67159:CDS |
| ACCGAATATTCTCGTGCTCG+AGG | 0.573234 | 1.2:-26491351 | MS.gene67159:CDS |
| GCATGGAAGGAATTTCTGCC+TGG | 0.573591 | 1.2:+26492558 | None:intergenic |
| TCCGATTTCCTAAGCATGGA+AGG | 0.574902 | 1.2:+26492545 | None:intergenic |
| ATGTCTAACAGATGCCACTC+AGG | 0.578658 | 1.2:-26490211 | MS.gene67159:CDS |
| ATAATACAATCTTTGACTGG+AGG | 0.578879 | 1.2:-26491605 | MS.gene67159:CDS |
| ATTCTTAGATAACAAGCGGA+TGG | 0.579016 | 1.2:-26492279 | MS.gene67159:CDS |
| AAAGTTGATGTAGATGCTGC+TGG | 0.579391 | 1.2:-26491110 | MS.gene67159:CDS |
| TTCAATCGGAGAGTAAGATC+AGG | 0.580927 | 1.2:-26490642 | MS.gene67159:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 1.2:+26490105 | None:intergenic |
| AAATAGCAAAATGATGGCAA+TGG | 0.584646 | 1.2:-26490271 | MS.gene67159:CDS |
| GCCTGTGAAGAACAGTCGTA+AGG | 0.584704 | 1.2:-26491678 | MS.gene67159:CDS |
| CAGTCCAGGAGATACTCAAT+CGG | 0.585874 | 1.2:+26492369 | None:intergenic |
| TCGAGGAGGAAACTTGTGAA+AGG | 0.586321 | 1.2:-26491425 | MS.gene67159:CDS |
| ATGATGGCAATGGCGGAGGA+AGG | 0.586995 | 1.2:-26490261 | MS.gene67159:CDS |
| AAAGATTCTTAGATAACAAG+CGG | 0.587242 | 1.2:-26492283 | MS.gene67159:CDS |
| TGTATCCATGTGACTGGGAT+GGG | 0.589361 | 1.2:+26492446 | None:intergenic |
| CCTCGAAAACTTCTCAACAC+CGG | 0.591475 | 1.2:+26491442 | None:intergenic |
| AGGAAGAAGATCGGGGCTTG+AGG | 0.593579 | 1.2:+26491240 | None:intergenic |
| GATACCAATCGACTTTCTGA+CGG | 0.594515 | 1.2:-26490990 | MS.gene67159:CDS |
| GGTGTGGGATCAGATAATCT+AGG | 0.597545 | 1.2:-26490525 | MS.gene67159:CDS |
| GAGATTGACTGCTTGTGCCA+AGG | 0.597834 | 1.2:-26490583 | MS.gene67159:CDS |
| GTTTACCCATCCCAGTCACA+TGG | 0.598464 | 1.2:-26492451 | MS.gene67159:CDS |
| CAACCTCTTGCCAGTAAGCG+GGG | 0.601857 | 1.2:+26491530 | None:intergenic |
| CCAAAGACCAGTAGTCGTTG+TGG | 0.603402 | 1.2:+26490905 | None:intergenic |
| TTGGTAACTGTAATGAGGAA+GGG | 0.605284 | 1.2:-26491316 | MS.gene67159:CDS |
| GAAGTAGTTGAGGAGCCTGT+TGG | 0.610422 | 1.2:-26490189 | MS.gene67159:CDS |
| AGATACACCTCTGTGACTGT+CGG | 0.611254 | 1.2:+26490791 | None:intergenic |
| GGTTTCTAAGTCATATGTGG+AGG | 0.613495 | 1.2:-26491819 | MS.gene67159:CDS |
| TTTGTTCGAGCAATTCGGCA+AGG | 0.616285 | 1.2:+26490003 | None:intergenic |
| ATGAAGCACGTTTCTCACGA+AGG | 0.616531 | 1.2:-26492614 | MS.gene67159:CDS |
| CTTAGATAACAAGCGGATGG+GGG | 0.617763 | 1.2:-26492276 | MS.gene67159:CDS |
| TAGCAAAATGATGGCAATGG+CGG | 0.620029 | 1.2:-26490268 | MS.gene67159:CDS |
| GAACCTAAAATGCTGATATG+TGG | 0.622268 | 1.2:-26490834 | MS.gene67159:CDS |
| CATTATGTATCCATGTGACT+GGG | 0.626289 | 1.2:+26492441 | None:intergenic |
| ATGTATCCATGTGACTGGGA+TGG | 0.628628 | 1.2:+26492445 | None:intergenic |
| TTATGATTCACCAAAGATGG+TGG | 0.628762 | 1.2:-26490856 | MS.gene67159:CDS |
| ATAAAGGGCGAAAATATACA+AGG | 0.632332 | 1.2:-26491079 | MS.gene67159:CDS |
| GCAACTCGAAAGCTAGAAGA+CGG | 0.633733 | 1.2:+26490495 | None:intergenic |
| AATGAGGAAGGGCCAGAAAG+GGG | 0.635015 | 1.2:-26491305 | MS.gene67159:CDS |
| TGGATACATAATGAAGAGTG+TGG | 0.635233 | 1.2:-26492431 | MS.gene67159:CDS |
| TCAGAATTCGACAGAACCTG+AGG | 0.637300 | 1.2:+26490294 | None:intergenic |
| CAGGTACATGAGTAATCAAG+CGG | 0.638954 | 1.2:+26492114 | None:intergenic |
| GATGGGTAAACCAATTGCAA+AGG | 0.641739 | 1.2:+26492463 | None:intergenic |
| CAGTTGTTCCTATTAAAAGG+AGG | 0.643452 | 1.2:-26490605 | MS.gene67159:CDS |
| AAGGAAAGTAAACCATAGCA+CGG | 0.647183 | 1.2:-26491060 | MS.gene67159:CDS |
| GTTTCTAAGTCATATGTGGA+GGG | 0.647748 | 1.2:-26491818 | MS.gene67159:CDS |
| TGAGTGGCATCTGTTAGACA+TGG | 0.649335 | 1.2:+26490213 | None:intergenic |
| ATTGTTGAGAATTCTTCAGG+AGG | 0.651016 | 1.2:-26490546 | MS.gene67159:CDS |
| GGTCTTTGGAGAGAAAGTAA+GGG | 0.652973 | 1.2:-26490891 | MS.gene67159:CDS |
| CTTTGGAGAGAAAGTAAGGG+TGG | 0.662141 | 1.2:-26490888 | MS.gene67159:CDS |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 1.2:+26490197 | None:intergenic |
| GGAGATACTCAATCGGCCAG+GGG | 0.672644 | 1.2:+26492376 | None:intergenic |
| AGGTACATGAGTAATCAAGC+GGG | 0.673603 | 1.2:+26492115 | None:intergenic |
| TCGATTATCATCGAACACAC+AGG | 0.680583 | 1.2:+26490689 | None:intergenic |
| GCATCTTCTAATTCAACTGG+CGG | 0.683679 | 1.2:+26490930 | None:intergenic |
| CTAGGATTTATGTCACGCTG+AGG | 0.693795 | 1.2:+26490150 | None:intergenic |
| TCTGAGCAACCAAAGAATCG+AGG | 0.695442 | 1.2:-26491503 | MS.gene67159:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 1.2:-26491185 | MS.gene67159:CDS |
| TTATTGTAGGAAGAAGATCG+GGG | 0.708515 | 1.2:+26491233 | None:intergenic |
| CACAGAGGTGTATCTAACAG+CGG | 0.712811 | 1.2:-26490783 | MS.gene67159:CDS |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 1.2:+26490550 | None:intergenic |
| AATAAAACCGACAGTCACAG+AGG | 0.723377 | 1.2:-26490798 | MS.gene67159:CDS |
| TCGATGATAATCGACCAAAG+AGG | 0.737307 | 1.2:-26490680 | MS.gene67159:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAGC+TGG | + | chr1.2:26490639-26490658 | None:intergenic | 10.0% |
| !! | CTTTATACAATCTTTATTGT+AGG | + | chr1.2:26491339-26491358 | None:intergenic | 20.0% |
| !! | TAAAGATTGTATAAAGTTCA+TGG | - | chr1.2:26491343-26491362 | MS.gene67159:CDS | 20.0% |
| !!! | TACTTGGTTTGTTTATTTTT+GGG | - | chr1.2:26490231-26490250 | MS.gene67159:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | + | chr1.2:26491087-26491106 | None:intergenic | 25.0% |
| ! | AAAGATTCTTAGATAACAAG+CGG | - | chr1.2:26490273-26490292 | MS.gene67159:CDS | 25.0% |
| ! | ATACAGTTGTTCCTATTAAA+AGG | - | chr1.2:26491948-26491967 | MS.gene67159:intron | 25.0% |
| ! | CAAGAAGAAAAACATTTGAT+TGG | - | chr1.2:26492631-26492650 | MS.gene67159:CDS | 25.0% |
| ! | CTGCTGGTAAAAAATATAAA+GGG | - | chr1.2:26491462-26491481 | MS.gene67159:CDS | 25.0% |
| ! | CTTTGCATATATTTATACTC+AGG | - | chr1.2:26490716-26490735 | MS.gene67159:CDS | 25.0% |
| ! | GAGAAAAACCAAATAATCTT+TGG | + | chr1.2:26491090-26491109 | None:intergenic | 25.0% |
| ! | GATATAATACAATCTTTGAC+TGG | - | chr1.2:26490948-26490967 | MS.gene67159:CDS | 25.0% |
| ! | GTATAAATATATGCAAAGTG+AGG | + | chr1.2:26490714-26490733 | None:intergenic | 25.0% |
| ! | TAATTGGATCACAAACAATT+GGG | + | chr1.2:26492090-26492109 | None:intergenic | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | + | chr1.2:26490612-26490631 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | - | chr1.2:26490302-26490321 | MS.gene67159:CDS | 25.0% |
| !! | GATACAAAAAGTTTTCTACT+TGG | - | chr1.2:26490215-26490234 | MS.gene67159:CDS | 25.0% |
| !! | TTCTGAAAATAGCAAAATGA+TGG | - | chr1.2:26492279-26492298 | MS.gene67159:CDS | 25.0% |
| !!! | CTACTTGGTTTGTTTATTTT+TGG | - | chr1.2:26490230-26490249 | MS.gene67159:CDS | 25.0% |
| AAATAGCAAAATGATGGCAA+TGG | - | chr1.2:26492285-26492304 | MS.gene67159:CDS | 30.0% | |
| AAATCACTTTCCTTTGCAAT+TGG | - | chr1.2:26490083-26490102 | MS.gene67159:CDS | 30.0% | |
| AACTTATGATTCACCAAAGA+TGG | - | chr1.2:26491697-26491716 | MS.gene67159:CDS | 30.0% | |
| ACTTTACTCACTGAATTAAC+AGG | + | chr1.2:26491431-26491450 | None:intergenic | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | - | chr1.2:26490157-26490176 | MS.gene67159:CDS | 30.0% | |
| ATAAAGGGCGAAAATATACA+AGG | - | chr1.2:26491477-26491496 | MS.gene67159:CDS | 30.0% | |
| ATAATACAATCTTTGACTGG+AGG | - | chr1.2:26490951-26490970 | MS.gene67159:CDS | 30.0% | |
| ATCATCATTGTTCAGATCAT+GGG | - | chr1.2:26492593-26492612 | MS.gene67159:CDS | 30.0% | |
| CTAATTGGATCACAAACAAT+TGG | + | chr1.2:26492091-26492110 | None:intergenic | 30.0% | |
| CTTTATTGTAGGAAGAAGAT+CGG | + | chr1.2:26491328-26491347 | None:intergenic | 30.0% | |
| GAAAAACATTTGATTGGAGA+TGG | - | chr1.2:26492637-26492656 | MS.gene67159:CDS | 30.0% | |
| GCTGCTGGTAAAAAATATAA+AGG | - | chr1.2:26491461-26491480 | MS.gene67159:CDS | 30.0% | |
| GGTGTGATGTAATGAAAAAA+AGG | + | chr1.2:26490618-26490637 | None:intergenic | 30.0% | |
| TAATACAATCTTTGACTGGA+GGG | - | chr1.2:26490952-26490971 | MS.gene67159:CDS | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | - | chr1.2:26491079-26491098 | MS.gene67159:CDS | 30.0% | |
| TTTATTGTAGGAAGAAGATC+GGG | + | chr1.2:26491327-26491346 | None:intergenic | 30.0% | |
| ! | ATAGGACAGAAACTTTTTAG+TGG | - | chr1.2:26490395-26490414 | MS.gene67159:CDS | 30.0% |
| ! | GGAAAGTTTTACAAAACAGA+TGG | - | chr1.2:26490323-26490342 | MS.gene67159:CDS | 30.0% |
| ! | TCATAAAGCATCAGTTCAAT+CGG | - | chr1.2:26491900-26491919 | MS.gene67159:intron | 30.0% |
| ! | TGTTTTTCCAAATAACCAAC+AGG | + | chr1.2:26492385-26492404 | None:intergenic | 30.0% |
| ! | TTTGAAGCATCTTATTGTGA+TGG | - | chr1.2:26490556-26490575 | MS.gene67159:CDS | 30.0% |
| !! | CTTCTTTGAAGTCTATTGTT+GGG | - | chr1.2:26490787-26490806 | MS.gene67159:CDS | 30.0% |
| !! | TAAAGTTGGTAACTGTAATG+AGG | - | chr1.2:26491235-26491254 | MS.gene67159:CDS | 30.0% |
| !! | TCTTCTTTGAAGTCTATTGT+TGG | - | chr1.2:26490786-26490805 | MS.gene67159:CDS | 30.0% |
| !!! | TATTTGGTTTTTCTCATTCC+CGG | - | chr1.2:26491095-26491114 | MS.gene67159:CDS | 30.0% |
| AAACAGATGGATATCGTAGA+TGG | - | chr1.2:26490336-26490355 | MS.gene67159:CDS | 35.0% | |
| AACGTTGTTGCATTCTGTTT+AGG | + | chr1.2:26491536-26491555 | None:intergenic | 35.0% | |
| AAGGAAAGTAAACCATAGCA+CGG | - | chr1.2:26491496-26491515 | MS.gene67159:CDS | 35.0% | |
| AATATATGCAAAGTGAGGAC+TGG | + | chr1.2:26490709-26490728 | None:intergenic | 35.0% | |
| ACGTTGTTGCATTCTGTTTA+GGG | + | chr1.2:26491535-26491554 | None:intergenic | 35.0% | |
| ATCATCATCATTCTCCTCAA+AGG | + | chr1.2:26489916-26489935 | None:intergenic | 35.0% | |
| ATCGCAAGATACTTTGTTAC+AGG | - | chr1.2:26490469-26490488 | MS.gene67159:CDS | 35.0% | |
| ATTCTTAGATAACAAGCGGA+TGG | - | chr1.2:26490277-26490296 | MS.gene67159:CDS | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | - | chr1.2:26491368-26491387 | MS.gene67159:CDS | 35.0% | |
| ATTGTTGAGAATTCTTCAGG+AGG | - | chr1.2:26492010-26492029 | MS.gene67159:intron | 35.0% | |
| CAAATGTAACGATCTCTTCT+GGG | - | chr1.2:26490992-26491011 | MS.gene67159:CDS | 35.0% | |
| CAGTTGTTCCTATTAAAAGG+AGG | - | chr1.2:26491951-26491970 | MS.gene67159:intron | 35.0% | |
| CATCATCATTGTTCAGATCA+TGG | - | chr1.2:26492592-26492611 | MS.gene67159:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr1.2:26491361-26491380 | MS.gene67159:CDS | 35.0% | |
| CATTATGTATCCATGTGACT+GGG | + | chr1.2:26490118-26490137 | None:intergenic | 35.0% | |
| CGATAATGATGCAAACAAGA+TGG | - | chr1.2:26491820-26491839 | MS.gene67159:CDS | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr1.2:26492009-26492028 | None:intergenic | 35.0% | |
| CTTTCACTTAGAACGAATCT+TGG | - | chr1.2:26490038-26490057 | MS.gene67159:CDS | 35.0% | |
| GAACCTAAAATGCTGATATG+TGG | - | chr1.2:26491722-26491741 | MS.gene67159:CDS | 35.0% | |
| GTTTCTAAGTCATATGTGGA+GGG | - | chr1.2:26490738-26490757 | MS.gene67159:CDS | 35.0% | |
| TCAGAGTGCAGGAAAAAAAA+GGG | - | chr1.2:26490359-26490378 | MS.gene67159:CDS | 35.0% | |
| TCAGGTTTCTAAGTCATATG+TGG | - | chr1.2:26490734-26490753 | MS.gene67159:CDS | 35.0% | |
| TCATTATGTATCCATGTGAC+TGG | + | chr1.2:26490119-26490138 | None:intergenic | 35.0% | |
| TGATGCTTTATGATCCTCTT+TGG | + | chr1.2:26491893-26491912 | None:intergenic | 35.0% | |
| TGGATACATAATGAAGAGTG+TGG | - | chr1.2:26490125-26490144 | MS.gene67159:CDS | 35.0% | |
| TTATGATTCACCAAAGATGG+TGG | - | chr1.2:26491700-26491719 | MS.gene67159:CDS | 35.0% | |
| TTATTGTAGGAAGAAGATCG+GGG | + | chr1.2:26491326-26491345 | None:intergenic | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | + | chr1.2:26491401-26491420 | None:intergenic | 35.0% | |
| TTCTTAGATAACAAGCGGAT+GGG | - | chr1.2:26490278-26490297 | MS.gene67159:CDS | 35.0% | |
| ! | AAAGTATCTTGCGATTCTTC+AGG | + | chr1.2:26490464-26490483 | None:intergenic | 35.0% |
| ! | AATGAAGAGTGTGGATATCA+TGG | - | chr1.2:26490134-26490153 | MS.gene67159:CDS | 35.0% |
| ! | CTTGATTTGAGTCCTAGAAT+AGG | - | chr1.2:26489966-26489985 | MS.gene67159:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | + | chr1.2:26491962-26491981 | None:intergenic | 35.0% |
| ! | TTGCCACATATCAGCATTTT+AGG | + | chr1.2:26491728-26491747 | None:intergenic | 35.0% |
| ! | TTGGTAACTGTAATGAGGAA+GGG | - | chr1.2:26491240-26491259 | MS.gene67159:CDS | 35.0% |
| ! | TTTTAGACATATCCGTGCTA+TGG | + | chr1.2:26491511-26491530 | None:intergenic | 35.0% |
| !! | ATGAAAAAAAGGTACTGGTG+TGG | + | chr1.2:26490607-26490626 | None:intergenic | 35.0% |
| !! | CTATTCTAGGACTCAAATCA+AGG | + | chr1.2:26489968-26489987 | None:intergenic | 35.0% |
| !! | TGAAAAAAAGGTACTGGTGT+GGG | + | chr1.2:26490606-26490625 | None:intergenic | 35.0% |
| !! | TTCTGACGGAAAAGTATTGA+AGG | - | chr1.2:26491580-26491599 | MS.gene67159:CDS | 35.0% |
| !!! | ATTTTAGGTTCCACCATCTT+TGG | + | chr1.2:26491713-26491732 | None:intergenic | 35.0% |
| AATAAAACCGACAGTCACAG+AGG | - | chr1.2:26491758-26491777 | MS.gene67159:CDS | 40.0% | |
| AATCTTTGACTGGAGGGTTT+CGG | - | chr1.2:26490958-26490977 | MS.gene67159:CDS | 40.0% | |
| AGGTACATGAGTAATCAAGC+GGG | + | chr1.2:26490444-26490463 | None:intergenic | 40.0% | |
| AGTGCAGGAAAAAAAAGGGA+GGG | - | chr1.2:26490363-26490382 | MS.gene67159:CDS | 40.0% | |
| CAGAAATTCCTTCCATGCTT+AGG | - | chr1.2:26490003-26490022 | MS.gene67159:CDS | 40.0% | |
| CAGGTACATGAGTAATCAAG+CGG | + | chr1.2:26490445-26490464 | None:intergenic | 40.0% | |
| CCAAATGTAACGATCTCTTC+TGG | - | chr1.2:26490991-26491010 | MS.gene67159:CDS | 40.0% | |
| CCAGAAGAGATCGTTACATT+TGG | + | chr1.2:26490994-26491013 | None:intergenic | 40.0% | |
| CGATTCTGCTGATGACTAAT+TGG | + | chr1.2:26492106-26492125 | None:intergenic | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr1.2:26492007-26492026 | MS.gene67159:intron | 40.0% | |
| GAAGACAAAGCTTTGCAAGT+TGG | + | chr1.2:26490915-26490934 | None:intergenic | 40.0% | |
| GACAAAAGTTCATGTTGCCT+CGG | + | chr1.2:26490422-26490441 | None:intergenic | 40.0% | |
| GATGGGTAAACCAATTGCAA+AGG | + | chr1.2:26490096-26490115 | None:intergenic | 40.0% | |
| GCATCTTCTAATTCAACTGG+CGG | + | chr1.2:26491629-26491648 | None:intergenic | 40.0% | |
| GGTTTCTAAGTCATATGTGG+AGG | - | chr1.2:26490737-26490756 | MS.gene67159:CDS | 40.0% | |
| GTAACATAGCCTCGATTCTT+TGG | + | chr1.2:26491065-26491084 | None:intergenic | 40.0% | |
| GTCAGAGTGCAGGAAAAAAA+AGG | - | chr1.2:26490358-26490377 | MS.gene67159:CDS | 40.0% | |
| TAGAATAGGTCATGAGTACC+AGG | - | chr1.2:26489980-26489999 | MS.gene67159:CDS | 40.0% | |
| TAGCAAAATGATGGCAATGG+CGG | - | chr1.2:26492288-26492307 | MS.gene67159:CDS | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | + | chr1.2:26492454-26492473 | None:intergenic | 40.0% | |
| TCCTTCCATGCTTAGGAAAT+CGG | - | chr1.2:26490010-26490029 | MS.gene67159:CDS | 40.0% | |
| TCGATGATAATCGACCAAAG+AGG | - | chr1.2:26491876-26491895 | MS.gene67159:intron | 40.0% | |
| TCGATTATCATCGAACACAC+AGG | + | chr1.2:26491870-26491889 | None:intergenic | 40.0% | |
| TCTTAGATAACAAGCGGATG+GGG | - | chr1.2:26490279-26490298 | MS.gene67159:CDS | 40.0% | |
| TCTTCATTTGATCCCCTTTC+TGG | + | chr1.2:26491266-26491285 | None:intergenic | 40.0% | |
| TGAAAGGATCTTTGTGTGTC+TGG | + | chr1.2:26492531-26492550 | None:intergenic | 40.0% | |
| TGGATCACAAACAATTGGGT+TGG | + | chr1.2:26492086-26492105 | None:intergenic | 40.0% | |
| TGGTACTCATGACCTATTCT+AGG | + | chr1.2:26489981-26490000 | None:intergenic | 40.0% | |
| TTCAATCGGAGAGTAAGATC+AGG | - | chr1.2:26491914-26491933 | MS.gene67159:intron | 40.0% | |
| TTGAAGTCTATTGTTGGGCT+TGG | - | chr1.2:26490792-26490811 | MS.gene67159:CDS | 40.0% | |
| TTTCAGTTTCAACATGCCTC+AGG | - | chr1.2:26492246-26492265 | MS.gene67159:CDS | 40.0% | |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr1.2:26492330-26492349 | None:intergenic | 40.0% |
| ! | GATACCAATCGACTTTCTGA+CGG | - | chr1.2:26491566-26491585 | MS.gene67159:CDS | 40.0% |
| ! | GGAGCATCTTCTAATTCAAC+TGG | + | chr1.2:26491632-26491651 | None:intergenic | 40.0% |
| ! | GGTCTTTGGAGAGAAAGTAA+GGG | - | chr1.2:26491665-26491684 | MS.gene67159:CDS | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr1.2:26490918-26490937 | MS.gene67159:CDS | 40.0% |
| ! | TGCCTTTTGTTCGAGCAATT+CGG | + | chr1.2:26492561-26492580 | None:intergenic | 40.0% |
| ! | TGGTCTTTGGAGAGAAAGTA+AGG | - | chr1.2:26491664-26491683 | MS.gene67159:CDS | 40.0% |
| ! | TTTCTAGTGCTTTGTCTCCT+AGG | + | chr1.2:26492427-26492446 | None:intergenic | 40.0% |
| ! | TTTTCCGTCAGAAAGTCGAT+TGG | + | chr1.2:26491573-26491592 | None:intergenic | 40.0% |
| ! | TTTTGTATCTGCATCAGTCC+AGG | + | chr1.2:26490204-26490223 | None:intergenic | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | - | chr1.2:26491446-26491465 | MS.gene67159:CDS | 40.0% |
| !! | AGAAACTTTTTAGTGGACCG+AGG | - | chr1.2:26490402-26490421 | MS.gene67159:CDS | 40.0% |
| !! | GTTGGTAACTGTAATGAGGA+AGG | - | chr1.2:26491239-26491258 | MS.gene67159:CDS | 40.0% |
| AAGAGAGACCTTACTAGGCT+TGG | - | chr1.2:26490849-26490868 | MS.gene67159:CDS | 45.0% | |
| AAGGGAGGGAAACGTATGAT+AGG | - | chr1.2:26490377-26490396 | MS.gene67159:CDS | 45.0% | |
| AATTCATGTCAATTGGCCCC+TGG | - | chr1.2:26490164-26490183 | MS.gene67159:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | - | chr1.2:26492450-26492469 | MS.gene67159:CDS | 45.0% | |
| AGATACACCTCTGTGACTGT+CGG | + | chr1.2:26491768-26491787 | None:intergenic | 45.0% | |
| AGGAGAAGAGAGACCTTACT+AGG | - | chr1.2:26490844-26490863 | MS.gene67159:CDS | 45.0% | |
| ATGAAGCACGTTTCTCACGA+AGG | - | chr1.2:26489942-26489961 | MS.gene67159:CDS | 45.0% | |
| ATGTATCCATGTGACTGGGA+TGG | + | chr1.2:26490114-26490133 | None:intergenic | 45.0% | |
| ATGTCTAACAGATGCCACTC+AGG | - | chr1.2:26492345-26492364 | MS.gene67159:CDS | 45.0% | |
| CAAAGACCAGTAGTCGTTGT+GGG | + | chr1.2:26491653-26491672 | None:intergenic | 45.0% | |
| CAGTCCAGGAGATACTCAAT+CGG | + | chr1.2:26490190-26490209 | None:intergenic | 45.0% | |
| CCTCGAAAACTTCTCAACAC+CGG | + | chr1.2:26491117-26491136 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | - | chr1.2:26491391-26491410 | MS.gene67159:CDS | 45.0% | |
| CTAGGATTTATGTCACGCTG+AGG | + | chr1.2:26492409-26492428 | None:intergenic | 45.0% | |
| CTCAGCGTGACATAAATCCT+AGG | - | chr1.2:26492407-26492426 | MS.gene67159:CDS | 45.0% | |
| CTCGAAAACTTCTCAACACC+GGG | + | chr1.2:26491116-26491135 | None:intergenic | 45.0% | |
| CTCGAGGAAGAAGCTAAAGT+TGG | - | chr1.2:26491221-26491240 | MS.gene67159:CDS | 45.0% | |
| CTTAGATAACAAGCGGATGG+GGG | - | chr1.2:26490280-26490299 | MS.gene67159:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | - | chr1.2:26490819-26490838 | MS.gene67159:CDS | 45.0% | |
| GAGTGCAGGAAAAAAAAGGG+AGG | - | chr1.2:26490362-26490381 | MS.gene67159:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | - | chr1.2:26491371-26491390 | MS.gene67159:CDS | 45.0% | |
| GCAACTCGAAAGCTAGAAGA+CGG | + | chr1.2:26492064-26492083 | None:intergenic | 45.0% | |
| GCAATTCGGCAAGGATTGAA+AGG | + | chr1.2:26492547-26492566 | None:intergenic | 45.0% | |
| GGTGTGGGATCAGATAATCT+AGG | - | chr1.2:26492031-26492050 | MS.gene67159:intron | 45.0% | |
| TAATGAGGAAGGGCCAGAAA+GGG | - | chr1.2:26491250-26491269 | MS.gene67159:CDS | 45.0% | |
| TCAGAATTCGACAGAACCTG+AGG | + | chr1.2:26492265-26492284 | None:intergenic | 45.0% | |
| TCCGATTTCCTAAGCATGGA+AGG | + | chr1.2:26490014-26490033 | None:intergenic | 45.0% | |
| TCCTCGAGCACGAGAATATT+CGG | + | chr1.2:26491209-26491228 | None:intergenic | 45.0% | |
| TCGAGGAGGAAACTTGTGAA+AGG | - | chr1.2:26491131-26491150 | MS.gene67159:CDS | 45.0% | |
| TCTGAGCAACCAAAGAATCG+AGG | - | chr1.2:26491053-26491072 | MS.gene67159:CDS | 45.0% | |
| TGAGAATTCTTCAGGAGGTG+TGG | - | chr1.2:26492015-26492034 | MS.gene67159:intron | 45.0% | |
| TGAGTGGCATCTGTTAGACA+TGG | + | chr1.2:26492346-26492365 | None:intergenic | 45.0% | |
| TGCCGAATTGCTCGAACAAA+AGG | - | chr1.2:26492556-26492575 | MS.gene67159:CDS | 45.0% | |
| TGTATCCATGTGACTGGGAT+GGG | + | chr1.2:26490113-26490132 | None:intergenic | 45.0% | |
| TTTGTTCGAGCAATTCGGCA+AGG | + | chr1.2:26492556-26492575 | None:intergenic | 45.0% | |
| ! | AATGCGGCTTTTCTCTTCCT+TGG | + | chr1.2:26491993-26492012 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr1.2:26491003-26491022 | MS.gene67159:CDS | 45.0% |
| ! | CACAGAGGTGTATCTAACAG+CGG | - | chr1.2:26491773-26491792 | MS.gene67159:CDS | 45.0% |
| ! | CTTTGGAGAGAAAGTAAGGG+TGG | - | chr1.2:26491668-26491687 | MS.gene67159:CDS | 45.0% |
| ! | GAGAATTCTTCAGGAGGTGT+GGG | - | chr1.2:26492016-26492035 | MS.gene67159:intron | 45.0% |
| ! | TGAGGAGCCTGTTGGTTATT+TGG | - | chr1.2:26492375-26492394 | MS.gene67159:CDS | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | - | chr1.2:26490824-26490843 | MS.gene67159:CDS | 45.0% |
| !! | GTGTTGAGAAGTTTTCGAGG+AGG | - | chr1.2:26491117-26491136 | MS.gene67159:CDS | 45.0% |
| AATGAGGAAGGGCCAGAAAG+GGG | - | chr1.2:26491251-26491270 | MS.gene67159:CDS | 50.0% | |
| ACCGAATATTCTCGTGCTCG+AGG | - | chr1.2:26491205-26491224 | MS.gene67159:CDS | 50.0% | |
| AGGAGATACTCAATCGGCCA+GGG | + | chr1.2:26490184-26490203 | None:intergenic | 50.0% | |
| ATCGTAGATGGTCAGAGTGC+AGG | - | chr1.2:26490348-26490367 | MS.gene67159:CDS | 50.0% | |
| CAAAATGATGGCAATGGCGG+AGG | - | chr1.2:26492291-26492310 | MS.gene67159:CDS | 50.0% | |
| CCAAAGACCAGTAGTCGTTG+TGG | + | chr1.2:26491654-26491673 | None:intergenic | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | + | chr1.2:26492362-26492381 | None:intergenic | 50.0% | |
| CTGCTCCGATTTCCTAAGCA+TGG | + | chr1.2:26490018-26490037 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | + | chr1.2:26491378-26491397 | None:intergenic | 50.0% | |
| GAAGTAGTTGAGGAGCCTGT+TGG | - | chr1.2:26492367-26492386 | MS.gene67159:CDS | 50.0% | |
| GAGATTGACTGCTTGTGCCA+AGG | - | chr1.2:26491973-26491992 | MS.gene67159:intron | 50.0% | |
| GCATGGAAGGAATTTCTGCC+TGG | + | chr1.2:26490001-26490020 | None:intergenic | 50.0% | |
| GCCTGTGAAGAACAGTCGTA+AGG | - | chr1.2:26490878-26490897 | MS.gene67159:CDS | 50.0% | |
| GCCTTACGACTGTTCTTCAC+AGG | + | chr1.2:26490882-26490901 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | - | chr1.2:26491390-26491409 | MS.gene67159:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | - | chr1.2:26490813-26490832 | MS.gene67159:CDS | 50.0% | |
| GTAATGAGGAAGGGCCAGAA+AGG | - | chr1.2:26491249-26491268 | MS.gene67159:CDS | 50.0% | |
| GTTTACCCATCCCAGTCACA+TGG | - | chr1.2:26490105-26490124 | MS.gene67159:CDS | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | - | chr1.2:26492357-26492376 | MS.gene67159:CDS | 50.0% | |
| TTCTTCAGCAGACAGAAGCC+TGG | - | chr1.2:26492138-26492157 | MS.gene67159:CDS | 50.0% | |
| TTTCATCATCCTCCTCTGCC+AGG | + | chr1.2:26492159-26492178 | None:intergenic | 50.0% | |
| !! | CACAGGCGTGTTGATTTCTC+TGG | + | chr1.2:26491853-26491872 | None:intergenic | 50.0% |
| !! | CCACAACGACTACTGGTCTT+TGG | - | chr1.2:26491651-26491670 | MS.gene67159:CDS | 50.0% |
| !! | CCGGTGTTGAGAAGTTTTCG+AGG | - | chr1.2:26491114-26491133 | MS.gene67159:CDS | 50.0% |
| !! | TGTTGGGCTTGGTGTTCTTG+TGG | - | chr1.2:26490803-26490822 | MS.gene67159:CDS | 50.0% |
| AGGAAGAAGATCGGGGCTTG+AGG | + | chr1.2:26491319-26491338 | None:intergenic | 55.0% | |
| CAACCTCTTGCCAGTAAGCG+GGG | + | chr1.2:26491029-26491048 | None:intergenic | 55.0% | |
| CAGGAGATACTCAATCGGCC+AGG | + | chr1.2:26490185-26490204 | None:intergenic | 55.0% | |
| CCAACCTCTTGCCAGTAAGC+GGG | + | chr1.2:26491030-26491049 | None:intergenic | 55.0% | |
| CTGGCCGATTGAGTATCTCC+TGG | - | chr1.2:26490183-26490202 | MS.gene67159:CDS | 55.0% | |
| GATGCTCCCACAACGACTAC+TGG | - | chr1.2:26491644-26491663 | MS.gene67159:CDS | 55.0% | |
| GCCAACCTCTTGCCAGTAAG+CGG | + | chr1.2:26491031-26491050 | None:intergenic | 55.0% | |
| GCTCGACACCAAGCCTAGTA+AGG | + | chr1.2:26490860-26490879 | None:intergenic | 55.0% | |
| GGAGATACTCAATCGGCCAG+GGG | + | chr1.2:26490183-26490202 | None:intergenic | 55.0% | |
| ! | ATGATGGCAATGGCGGAGGA+AGG | - | chr1.2:26492295-26492314 | MS.gene67159:CDS | 55.0% |
| !! | AGGTACTGGTGTGGGCATAG+AGG | + | chr1.2:26490598-26490617 | None:intergenic | 55.0% |
| AGACAGAAGCCTGGCAGAGG+AGG | - | chr1.2:26492147-26492166 | MS.gene67159:CDS | 60.0% | |
| AGCAGACAGAAGCCTGGCAG+AGG | - | chr1.2:26492144-26492163 | MS.gene67159:CDS | 60.0% | |
| AGCTGTTTGGCCCCGCTTAC+TGG | - | chr1.2:26491016-26491035 | MS.gene67159:CDS | 60.0% | |
| CCCGCTTACTGGCAAGAGGT+TGG | - | chr1.2:26491027-26491046 | MS.gene67159:CDS | 60.0% | |
| GGAAGGCGGGCAACACCTAA+AGG | - | chr1.2:26492312-26492331 | MS.gene67159:CDS | 60.0% | |
| ! | ATGGCAATGGCGGAGGAAGG+CGG | - | chr1.2:26492298-26492317 | MS.gene67159:CDS | 60.0% |
| TGGCCCCGCTTACTGGCAAG+AGG | - | chr1.2:26491023-26491042 | MS.gene67159:CDS | 65.0% | |
| ! | TGGCAATGGCGGAGGAAGGC+GGG | - | chr1.2:26492299-26492318 | MS.gene67159:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 26489906 | 26492672 | 26489906 | ID=MS.gene67159 |
| chr1.2 | mRNA | 26489906 | 26492672 | 26489906 | ID=MS.gene67159.t1;Parent=MS.gene67159 |
| chr1.2 | exon | 26492088 | 26492672 | 26492088 | ID=MS.gene67159.t1.exon1;Parent=MS.gene67159.t1 |
| chr1.2 | CDS | 26492088 | 26492672 | 26492088 | ID=cds.MS.gene67159.t1;Parent=MS.gene67159.t1 |
| chr1.2 | exon | 26489906 | 26491840 | 26489906 | ID=MS.gene67159.t1.exon2;Parent=MS.gene67159.t1 |
| chr1.2 | CDS | 26489906 | 26491840 | 26489906 | ID=cds.MS.gene67159.t1;Parent=MS.gene67159.t1 |
| Gene Sequence |
| Protein sequence |
