Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063225.t1 | XP_013467079.1 | 85.5 | 842 | 119 | 2 | 1 | 842 | 1 | 839 | 0.00E+00 | 1394 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063225.t1 | A0A072VGE3 | 85.5 | 842 | 119 | 2 | 1 | 842 | 1 | 839 | 0.0e+00 | 1394.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053360 | MS.gene063225 | 0.837077 | 6.43E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063225 | MS.gene29350 | PPI |
| MS.gene063225 | MS.gene050891 | PPI |
| MS.gene063225 | MS.gene054416 | PPI |
| MS.gene063225 | MS.gene072483 | PPI |
| MS.gene063225 | MS.gene072542 | PPI |
| MS.gene063225 | MS.gene29351 | PPI |
| MS.gene063225 | MS.gene050893 | PPI |
| MS.gene063225 | MS.gene29352 | PPI |
| MS.gene050738 | MS.gene063225 | PPI |
| MS.gene050893 | MS.gene063225 | PPI |
| MS.gene063225 | MS.gene78588 | PPI |
| MS.gene063225 | MS.gene65461 | PPI |
| MS.gene063225 | MS.gene050890 | PPI |
| MS.gene063225 | MS.gene050889 | PPI |
| MS.gene063225 | MS.gene053360 | PPI |
| MS.gene063225 | MS.gene78584 | PPI |
| MS.gene063225 | MS.gene072484 | PPI |
| MS.gene063225 | MS.gene78586 | PPI |
| MS.gene063225 | MS.gene072485 | PPI |
| MS.gene063225 | MS.gene78585 | PPI |
| MS.gene78587 | MS.gene063225 | PPI |
| MS.gene063225 | MS.gene050892 | PPI |
| MS.gene063225 | MS.gene050942 | PPI |
| MS.gene67159 | MS.gene063225 | PPI |
| MS.gene072481 | MS.gene063225 | PPI |
| MS.gene063225 | MS.gene072482 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063225.t1 | MTR_1g041895 | 90.618 | 842 | 76 | 2 | 1 | 842 | 1 | 839 | 0.0 | 1535 |
| MS.gene063225.t1 | MTR_7g113270 | 69.816 | 815 | 183 | 12 | 1 | 810 | 1 | 757 | 0.0 | 1038 |
| MS.gene063225.t1 | MTR_7g113220 | 69.202 | 815 | 184 | 12 | 1 | 810 | 1 | 753 | 0.0 | 1025 |
| MS.gene063225.t1 | MTR_7g113280 | 67.835 | 799 | 205 | 8 | 1 | 794 | 1 | 752 | 0.0 | 1018 |
| MS.gene063225.t1 | MTR_7g113250 | 73.043 | 460 | 95 | 3 | 13 | 470 | 1 | 433 | 0.0 | 658 |
| MS.gene063225.t1 | MTR_7g113250 | 64.646 | 198 | 66 | 3 | 634 | 829 | 436 | 631 | 1.05e-68 | 240 |
| MS.gene063225.t1 | MTR_7g112390 | 69.824 | 454 | 61 | 4 | 131 | 581 | 1 | 381 | 0.0 | 577 |
| MS.gene063225.t1 | MTR_7g112390 | 70.611 | 262 | 40 | 3 | 581 | 840 | 478 | 704 | 1.33e-101 | 331 |
| MS.gene063225.t1 | MTR_7g108470 | 43.038 | 474 | 215 | 9 | 4 | 426 | 6 | 475 | 1.76e-113 | 368 |
| MS.gene063225.t1 | MTR_4g119630 | 46.049 | 367 | 173 | 6 | 22 | 372 | 40 | 397 | 3.77e-98 | 314 |
| MS.gene063225.t1 | MTR_3g049350 | 79.882 | 169 | 32 | 1 | 304 | 470 | 3 | 171 | 2.71e-83 | 268 |
| MS.gene063225.t1 | MTR_3g049350 | 61.842 | 76 | 27 | 2 | 634 | 709 | 174 | 247 | 1.39e-19 | 90.1 |
| MS.gene063225.t1 | MTR_2g436970 | 38.369 | 331 | 164 | 11 | 26 | 355 | 17 | 308 | 3.50e-62 | 217 |
| MS.gene063225.t1 | MTR_7g113290 | 73.913 | 115 | 29 | 1 | 568 | 682 | 10 | 123 | 1.07e-42 | 158 |
| MS.gene063225.t1 | MTR_4g119640 | 30.159 | 126 | 57 | 4 | 31 | 144 | 27 | 133 | 3.42e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063225.t1 | AT1G09040 | 44.743 | 447 | 195 | 7 | 23 | 424 | 35 | 474 | 1.60e-111 | 362 |
| MS.gene063225.t1 | AT1G09050 | 44.072 | 447 | 198 | 7 | 23 | 424 | 35 | 474 | 7.47e-108 | 353 |
| MS.gene063225.t1 | AT1G09050 | 44.072 | 447 | 198 | 7 | 23 | 424 | 35 | 474 | 7.47e-108 | 353 |
| MS.gene063225.t1 | AT2G47820 | 41.328 | 467 | 216 | 10 | 18 | 433 | 30 | 489 | 8.01e-105 | 342 |
| MS.gene063225.t1 | AT2G47820 | 41.328 | 467 | 216 | 10 | 18 | 433 | 30 | 489 | 8.01e-105 | 342 |
| MS.gene063225.t1 | AT1G55050 | 43.049 | 446 | 200 | 9 | 26 | 433 | 27 | 456 | 4.34e-96 | 321 |
| MS.gene063225.t1 | AT1G55050 | 43.049 | 446 | 200 | 9 | 26 | 433 | 27 | 456 | 4.34e-96 | 321 |
Find 170 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCATTTGATCCCCTTTC+TGG | 0.062724 | 1.3:+25335155 | None:intergenic |
| GAGAACCGATGTTGCTTATT+TGG | 0.099155 | 1.3:-25334028 | MS.gene063225:CDS |
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 1.3:-25335339 | MS.gene063225:CDS |
| TGATTCTGCTGATGACTAAT+TGG | 0.230705 | 1.3:+25334315 | None:intergenic |
| ATACAGTTGTTCCTATTAAA+AGG | 0.233999 | 1.3:-25334470 | MS.gene063225:CDS |
| ACGTTGTTGCATTCTGTTTA+GGG | 0.255308 | 1.3:+25334886 | None:intergenic |
| CGCATTGTTGAGAATTCTTC+AGG | 0.256639 | 1.3:-25334411 | MS.gene063225:CDS |
| CCAAATGTAACGATCTCTTC+TGG | 0.272360 | 1.3:-25335427 | MS.gene063225:CDS |
| TCCTCGAGCACGAGAATATT+CGG | 0.276731 | 1.3:+25335212 | None:intergenic |
| AGCTGTTTGGCCCCGCTTAC+TGG | 0.290051 | 1.3:-25335402 | MS.gene063225:CDS |
| GTAACATAGCCTCGATTCTT+TGG | 0.306244 | 1.3:+25335356 | None:intergenic |
| TGGTACTCATGACCTATTCT+AGG | 0.307157 | 1.3:+25336396 | None:intergenic |
| ATCGCAAGATACTTTGTTAC+AGG | 0.312695 | 1.3:-25335905 | MS.gene063225:intron |
| TGATGCTTTATGATCCTCTT+TGG | 0.320294 | 1.3:+25334528 | None:intergenic |
| TAAAGATTGTATAAAGTTCA+TGG | 0.326893 | 1.3:-25335075 | MS.gene063225:CDS |
| TTTCTAGTGCTTTGTCTCCT+AGG | 0.328216 | 1.3:+25333985 | None:intergenic |
| AACGTTGTTGCATTCTGTTT+AGG | 0.332484 | 1.3:+25334885 | None:intergenic |
| TCCTTCCATGCTTAGGAAAT+CGG | 0.340779 | 1.3:-25336364 | MS.gene063225:CDS |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 1.3:-25335028 | MS.gene063225:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.348937 | 1.3:-25335415 | MS.gene063225:CDS |
| ACTTTACTCACTGAATTAAC+AGG | 0.353037 | 1.3:+25334990 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.354435 | 1.3:-25335500 | MS.gene063225:CDS |
| CTTCTTTGAAGTCTATTGTT+GGG | 0.354909 | 1.3:-25335631 | MS.gene063225:CDS |
| CCACAACGACTACTGGTCTT+TGG | 0.359141 | 1.3:-25334767 | MS.gene063225:CDS |
| CTAATTGGATCACAAACAAT+TGG | 0.362277 | 1.3:+25334330 | None:intergenic |
| AATATTTGACTGGAGGGTTT+CGG | 0.362845 | 1.3:-25335460 | MS.gene063225:CDS |
| CTTTATACAATCTTTATTGT+AGG | 0.364885 | 1.3:+25335082 | None:intergenic |
| TTGAAGTCTATTGTTGGGCT+TGG | 0.375908 | 1.3:-25335626 | MS.gene063225:CDS |
| TCTTCTTTGAAGTCTATTGT+TGG | 0.379550 | 1.3:-25335632 | MS.gene063225:CDS |
| TGAAAGGATCTTTGTGTGTC+TGG | 0.380371 | 1.3:+25333881 | None:intergenic |
| AAATCACTTTCCTTTGCAAT+TGG | 0.386218 | 1.3:-25336291 | MS.gene063225:CDS |
| CCAGAAGAGATCGTTACATT+TGG | 0.393588 | 1.3:+25335427 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.395919 | 1.3:-25335057 | MS.gene063225:CDS |
| CACAGGCGTGTTGATTTCTC+TGG | 0.401071 | 1.3:+25334568 | None:intergenic |
| AACTTATGATTCACCAAAGA+TGG | 0.407799 | 1.3:-25334721 | MS.gene063225:CDS |
| CACCATCATTGTTCAGATCA+TGG | 0.415384 | 1.3:-25333817 | MS.gene063225:CDS |
| TTGGCAGATGTTGTCCTTTG+AGG | 0.417875 | 1.3:-25336475 | None:intergenic |
| CTTTCACTTAGAACGAATCT+TGG | 0.419928 | 1.3:-25336336 | MS.gene063225:CDS |
| CAGAAATTCCTTCCATGCTT+AGG | 0.420911 | 1.3:-25336371 | MS.gene063225:CDS |
| AGACATCAATTCATGTCAAT+TGG | 0.429424 | 1.3:-25336217 | MS.gene063225:CDS |
| TGGTCTTTGGAGAGAATGTA+AGG | 0.432415 | 1.3:-25334754 | MS.gene063225:CDS |
| TTTATTGTAGGAAGAAGATC+GGG | 0.433582 | 1.3:+25335094 | None:intergenic |
| CAAATGTAACGATCTCTTCT+GGG | 0.441362 | 1.3:-25335426 | MS.gene063225:CDS |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 1.3:-25335599 | MS.gene063225:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 1.3:+25335020 | None:intergenic |
| TTCTGACGGAAGAGTATTGA+AGG | 0.458525 | 1.3:-25334838 | MS.gene063225:CDS |
| AAGGGAGGGAAACGTATGAT+AGG | 0.460668 | 1.3:-25335997 | MS.gene063225:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 1.3:+25335043 | None:intergenic |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 1.3:-25336240 | MS.gene063225:CDS |
| CTTGATTTGAGCCCTAGAAT+AGG | 0.471834 | 1.3:-25336408 | MS.gene063225:CDS |
| CCAACCTCTTGCCAGTAAGC+GGG | 0.472085 | 1.3:+25335391 | None:intergenic |
| GGAGCATCTTCTAATTCAAC+TGG | 0.473411 | 1.3:+25334789 | None:intergenic |
| GCCAACCTCTTGCCAGTAAG+CGG | 0.473500 | 1.3:+25335390 | None:intergenic |
| TGTCTCCTAGGATTTATGTC+AGG | 0.477106 | 1.3:+25333997 | None:intergenic |
| GGAAGACGAGCAACGCCTAA+AGG | 0.479187 | 1.3:-25334103 | MS.gene063225:CDS |
| TCATTATGTATCCATGTGAC+TGG | 0.486359 | 1.3:+25336258 | None:intergenic |
| GAAGACAAAGCTTTGCAAGT+TGG | 0.488718 | 1.3:+25335506 | None:intergenic |
| CTCGAAAACTTCTCAACACC+GGG | 0.489787 | 1.3:+25335305 | None:intergenic |
| TAATTGGATCACAAACAATT+GGG | 0.490571 | 1.3:+25334331 | None:intergenic |
| TGCCGCAGTACTCGAACAAA+AGG | 0.490980 | 1.3:-25333853 | MS.gene063225:CDS |
| TCATAAAGCATCAGTTCAAT+CGG | 0.495370 | 1.3:-25334518 | MS.gene063225:CDS |
| GATGCTCCCACAACGACTAC+TGG | 0.495943 | 1.3:-25334774 | MS.gene063225:CDS |
| CTATTCTAGGGCTCAAATCA+AGG | 0.497085 | 1.3:+25336409 | None:intergenic |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 1.3:-25335050 | MS.gene063225:CDS |
| CTTTATTGTAGGAAGAAGAT+CGG | 0.498545 | 1.3:+25335093 | None:intergenic |
| GCTCGACACCAAGCCTAGTA+AGG | 0.499492 | 1.3:+25335561 | None:intergenic |
| ATCGTAGATGGTCAGAGTGC+AGG | 0.501650 | 1.3:-25336026 | MS.gene063225:CDS |
| TCTTAGATAACAAGCGGATG+GGG | 0.502626 | 1.3:-25336095 | MS.gene063225:CDS |
| TGTTGGGCTTGGTGTTCTTG+TGG | 0.505949 | 1.3:-25335615 | MS.gene063225:CDS |
| AAACAGATGGATATCGTAGA+TGG | 0.508693 | 1.3:-25336038 | MS.gene063225:CDS |
| CTGGCCGATTGAGTAGCTCC+TGG | 0.509199 | 1.3:-25336191 | MS.gene063225:CDS |
| CCCGCTTACTGGCAAGAGGT+TGG | 0.511676 | 1.3:-25335391 | MS.gene063225:CDS |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.513384 | 1.3:-25335605 | MS.gene063225:CDS |
| AGGAGAAGAGAGACCTTACT+AGG | 0.516287 | 1.3:-25335574 | MS.gene063225:CDS |
| GACAAAAGTTCATGTTGCCT+CGG | 0.517703 | 1.3:+25335955 | None:intergenic |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 1.3:-25333959 | MS.gene063225:CDS |
| TAATGAGGAAGGGCCAGAAA+GGG | 0.523242 | 1.3:-25335168 | MS.gene063225:CDS |
| AACTACTTCCTGAGTGGCAG+CGG | 0.523324 | 1.3:+25334062 | None:intergenic |
| TGGATCACAAACAATTGGGT+TGG | 0.524562 | 1.3:+25334335 | None:intergenic |
| ACCATCATTGTTCAGATCAT+GGG | 0.524728 | 1.3:-25333816 | MS.gene063225:CDS |
| AAGAGAGACCTTACTAGGCT+TGG | 0.528520 | 1.3:-25335569 | MS.gene063225:CDS |
| TTCTTAGATAACAAGCGGAT+GGG | 0.531523 | 1.3:-25336096 | MS.gene063225:CDS |
| AATTCATGTCAATTGGCTCC+TGG | 0.531545 | 1.3:-25336210 | MS.gene063225:CDS |
| GAGAATTCTTCAGGAGGTGT+GGG | 0.536899 | 1.3:-25334402 | MS.gene063225:CDS |
| TAGAATAGGTCATGAGTACC+AGG | 0.538787 | 1.3:-25336394 | MS.gene063225:CDS |
| CAAAGACCAGTAGTCGTTGT+GGG | 0.539657 | 1.3:+25334768 | None:intergenic |
| TGAGAATTCTTCAGGAGGTG+TGG | 0.539949 | 1.3:-25334403 | MS.gene063225:CDS |
| GTTGGTAACTGTAATGAGGA+AGG | 0.540015 | 1.3:-25335179 | MS.gene063225:CDS |
| CTCGAGGAAGAAGCTAAAGT+TGG | 0.542576 | 1.3:-25335197 | MS.gene063225:CDS |
| ATGTCTAACCGCTGCCACTC+AGG | 0.543121 | 1.3:-25334070 | MS.gene063225:CDS |
| GATATAATACAATATTTGAC+TGG | 0.543181 | 1.3:-25335470 | MS.gene063225:CDS |
| GGTACTCATGACCTATTCTA+GGG | 0.546999 | 1.3:+25336397 | None:intergenic |
| TAATACAATATTTGACTGGA+GGG | 0.548345 | 1.3:-25335466 | MS.gene063225:CDS |
| GCCTTACGACTGTTCTTCAC+AGG | 0.550268 | 1.3:+25335539 | None:intergenic |
| ATCATCATCATTCTCCTCAA+AGG | 0.552364 | 1.3:+25336461 | None:intergenic |
| CGATAATGATGCAAACAAGA+TGG | 0.552574 | 1.3:-25334598 | MS.gene063225:CDS |
| CTTCTGTCTGCTGAAGAAGC+AGG | 0.553590 | 1.3:+25334285 | None:intergenic |
| CTGCTCCGATTTCCTAAGCA+TGG | 0.556683 | 1.3:+25336359 | None:intergenic |
| CAGTCCAGGAGCTACTCAAT+CGG | 0.558016 | 1.3:+25336187 | None:intergenic |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 1.3:-25335027 | MS.gene063225:CDS |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 1.3:-25335594 | MS.gene063225:CDS |
| TGGCCCCGCTTACTGGCAAG+AGG | 0.562669 | 1.3:-25335395 | MS.gene063225:CDS |
| AACAGCCTGACATAAATCCT+AGG | 0.564574 | 1.3:-25334002 | MS.gene063225:CDS |
| TCAGGTTTCTAAGTCATATG+TGG | 0.571418 | 1.3:-25335684 | MS.gene063225:intron |
| TAAAGTTGGTAACTGTAATG+AGG | 0.572386 | 1.3:-25335183 | MS.gene063225:CDS |
| GTAATGAGGAAGGGCCAGAA+AGG | 0.573026 | 1.3:-25335169 | MS.gene063225:CDS |
| ACCGAATATTCTCGTGCTCG+AGG | 0.573234 | 1.3:-25335213 | MS.gene063225:CDS |
| GCATGGAAGGAATTTCTGCC+TGG | 0.573591 | 1.3:+25336376 | None:intergenic |
| TCCGATTTCCTAAGCATGGA+AGG | 0.574902 | 1.3:+25336363 | None:intergenic |
| CAGGAGCTACTCAATCGGCC+AGG | 0.578566 | 1.3:+25336192 | None:intergenic |
| ATTCTTAGATAACAAGCGGA+TGG | 0.579016 | 1.3:-25336097 | MS.gene063225:CDS |
| AAAGTTGATGTAGATGCTGC+TGG | 0.579391 | 1.3:-25334972 | MS.gene063225:CDS |
| TTCAATCGGAGAGTAAGATC+AGG | 0.580927 | 1.3:-25334504 | MS.gene063225:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 1.3:+25333958 | None:intergenic |
| GCCTGTGAAGAACAGTCGTA+AGG | 0.584704 | 1.3:-25335540 | MS.gene063225:CDS |
| AGCAGACAGAAGCTTGTCAG+AGG | 0.585594 | 1.3:-25334274 | MS.gene063225:CDS |
| TCGAGGAGGAAACTTGTGAA+AGG | 0.586321 | 1.3:-25335287 | MS.gene063225:CDS |
| AAAGATTCTTAGATAACAAG+CGG | 0.587242 | 1.3:-25336101 | MS.gene063225:CDS |
| TGTATCCATGTGACTGGGAT+GGG | 0.589361 | 1.3:+25336264 | None:intergenic |
| TTTGTTCGAGTACTGCGGCA+AGG | 0.589919 | 1.3:+25333856 | None:intergenic |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.590481 | 1.3:-25334058 | MS.gene063225:CDS |
| CCTCGAAAACTTCTCAACAC+CGG | 0.591475 | 1.3:+25335304 | None:intergenic |
| AGGAAGAAGATCGGGGCTTG+AGG | 0.593579 | 1.3:+25335102 | None:intergenic |
| GTACTGCGGCAAGGATTGAA+AGG | 0.594679 | 1.3:+25333865 | None:intergenic |
| GGTGTGGGATCAGATAATCT+AGG | 0.597545 | 1.3:-25334387 | MS.gene063225:CDS |
| GAGATTGACTGCTTGTGCCA+AGG | 0.597834 | 1.3:-25334445 | MS.gene063225:CDS |
| GTTTACCCATCCCAGTCACA+TGG | 0.598464 | 1.3:-25336269 | MS.gene063225:CDS |
| GATACCAATCGACTTTCTGA+CGG | 0.601169 | 1.3:-25334852 | MS.gene063225:CDS |
| CAACCTCTTGCCAGTAAGCG+GGG | 0.601857 | 1.3:+25335392 | None:intergenic |
| TGAGTGGCAGCGGTTAGACA+TGG | 0.602024 | 1.3:+25334072 | None:intergenic |
| ATAATACAATATTTGACTGG+AGG | 0.602627 | 1.3:-25335467 | MS.gene063225:CDS |
| CCAAAGACCAGTAGTCGTTG+TGG | 0.603402 | 1.3:+25334767 | None:intergenic |
| TTGGTAACTGTAATGAGGAA+GGG | 0.605284 | 1.3:-25335178 | MS.gene063225:CDS |
| AGACAGAAGCTTGTCAGAGG+AGG | 0.609532 | 1.3:-25334271 | MS.gene063225:CDS |
| AGATACACCTCTGTGACTGT+CGG | 0.611254 | 1.3:+25334653 | None:intergenic |
| GGTTTCTAAGTCATATGTGG+AGG | 0.613495 | 1.3:-25335681 | MS.gene063225:CDS |
| ATGAAGCACGTTTCTCACGA+AGG | 0.616531 | 1.3:-25336432 | MS.gene063225:CDS |
| CTTAGATAACAAGCGGATGG+GGG | 0.617763 | 1.3:-25336094 | MS.gene063225:CDS |
| TCCCATGATCTGAACAATGA+TGG | 0.620934 | 1.3:+25333815 | None:intergenic |
| GAACCTAAAATGCTGATATG+TGG | 0.622268 | 1.3:-25334696 | MS.gene063225:CDS |
| CATTATGTATCCATGTGACT+GGG | 0.626289 | 1.3:+25336259 | None:intergenic |
| ATGTATCCATGTGACTGGGA+TGG | 0.628628 | 1.3:+25336263 | None:intergenic |
| TTATGATTCACCAAAGATGG+TGG | 0.628762 | 1.3:-25334718 | MS.gene063225:CDS |
| CAGATACATGAGTAATCAAG+CGG | 0.630619 | 1.3:+25335932 | None:intergenic |
| ATAAAGGGCGAAAATATACA+AGG | 0.632332 | 1.3:-25334941 | MS.gene063225:CDS |
| GCAACTCGAAAGCTAGAAGA+CGG | 0.633733 | 1.3:+25334357 | None:intergenic |
| AATGAGGAAGGGCCAGAAAG+GGG | 0.635015 | 1.3:-25335167 | MS.gene063225:CDS |
| TCTTCCGTCAGAAAGTCGAT+TGG | 0.635068 | 1.3:+25334848 | None:intergenic |
| TGGATACATAATGAAGAGTG+TGG | 0.635233 | 1.3:-25336249 | MS.gene063225:CDS |
| GATGGGTAAACCAATTGCAA+AGG | 0.641739 | 1.3:+25336281 | None:intergenic |
| CTTTGGAGAGAATGTAAGGG+TGG | 0.642079 | 1.3:-25334750 | MS.gene063225:CDS |
| CAGTTGTTCCTATTAAAAGG+AGG | 0.643452 | 1.3:-25334467 | MS.gene063225:CDS |
| AAGGAAAGTAAACCATAGCA+CGG | 0.647183 | 1.3:-25334922 | MS.gene063225:CDS |
| GTTTCTAAGTCATATGTGGA+GGG | 0.647748 | 1.3:-25335680 | MS.gene063225:CDS |
| TCAGAATTCGACAGAACCTG+AGG | 0.648451 | 1.3:+25334153 | None:intergenic |
| ATTGTTGAGAATTCTTCAGG+AGG | 0.651016 | 1.3:-25334408 | MS.gene063225:CDS |
| GGTCTTTGGAGAGAATGTAA+GGG | 0.652973 | 1.3:-25334753 | MS.gene063225:CDS |
| AGATACATGAGTAATCAAGC+GGG | 0.662972 | 1.3:+25335933 | None:intergenic |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 1.3:+25334056 | None:intergenic |
| TCATTGTTCAGATCATGGGA+AGG | 0.679797 | 1.3:-25333812 | MS.gene063225:CDS |
| TCGATTATCATCGAACACAC+AGG | 0.680583 | 1.3:+25334551 | None:intergenic |
| GCATCTTCTAATTCAACTGG+CGG | 0.683679 | 1.3:+25334792 | None:intergenic |
| TCTGAGCAACCAAAGAATCG+AGG | 0.695442 | 1.3:-25335365 | MS.gene063225:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 1.3:-25335047 | MS.gene063225:CDS |
| TAAGCAACATCGGTTCTCAG+AGG | 0.702005 | 1.3:+25334033 | None:intergenic |
| TTATTGTAGGAAGAAGATCG+GGG | 0.708515 | 1.3:+25335095 | None:intergenic |
| CACAGAGGTGTATCTAACAG+CGG | 0.712811 | 1.3:-25334645 | MS.gene063225:CDS |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 1.3:+25334412 | None:intergenic |
| AATAAAACCGACAGTCACAG+AGG | 0.723377 | 1.3:-25334660 | MS.gene063225:CDS |
| TCGATGATAATCGACCAAAG+AGG | 0.737307 | 1.3:-25334542 | MS.gene063225:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGATATATATATATAGC+TGG | + | chr1.3:25334492-25334511 | None:intergenic | 15.0% |
| !! | AAATAGAAAAATGATGGTAA+TGG | - | chr1.3:25336097-25336116 | MS.gene063225:CDS | 20.0% |
| !! | CTTTATACAATCTTTATTGT+AGG | + | chr1.3:25335148-25335167 | None:intergenic | 20.0% |
| !! | GATATAATACAATATTTGAC+TGG | - | chr1.3:25334757-25334776 | MS.gene063225:CDS | 20.0% |
| !! | TAAAGATTGTATAAAGTTCA+TGG | - | chr1.3:25335152-25335171 | MS.gene063225:CDS | 20.0% |
| !!! | TACTTGGTTTGTTTATTTTT+GGG | - | chr1.3:25334084-25334103 | MS.gene063225:CDS | 20.0% |
| !!! | TTCTGAAAATAGAAAAATGA+TGG | - | chr1.3:25336091-25336110 | MS.gene063225:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | + | chr1.3:25334896-25334915 | None:intergenic | 25.0% |
| ! | AAAGATTCTTAGATAACAAG+CGG | - | chr1.3:25334126-25334145 | MS.gene063225:CDS | 25.0% |
| ! | ATAATACAATATTTGACTGG+AGG | - | chr1.3:25334760-25334779 | MS.gene063225:CDS | 25.0% |
| ! | ATACAGTTGTTCCTATTAAA+AGG | - | chr1.3:25335757-25335776 | MS.gene063225:intron | 25.0% |
| ! | CAAGAAGAAAAACATTTGAT+TGG | - | chr1.3:25336449-25336468 | MS.gene063225:CDS | 25.0% |
| ! | CTGCTGGTAAAAAATATAAA+GGG | - | chr1.3:25335271-25335290 | MS.gene063225:CDS | 25.0% |
| ! | CTTTGCATATATTTATACTC+AGG | - | chr1.3:25334525-25334544 | MS.gene063225:CDS | 25.0% |
| ! | GAGAAAAACCAAATAATCTT+TGG | + | chr1.3:25334899-25334918 | None:intergenic | 25.0% |
| ! | GTATAAATATATGCAAAGTG+AGG | + | chr1.3:25334523-25334542 | None:intergenic | 25.0% |
| ! | TAATACAATATTTGACTGGA+GGG | - | chr1.3:25334761-25334780 | MS.gene063225:CDS | 25.0% |
| ! | TAATTGGATCACAAACAATT+GGG | + | chr1.3:25335899-25335918 | None:intergenic | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | + | chr1.3:25334465-25334484 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | - | chr1.3:25334155-25334174 | MS.gene063225:CDS | 25.0% |
| !! | GATACAAAAAGTTTTCTACT+TGG | - | chr1.3:25334068-25334087 | MS.gene063225:CDS | 25.0% |
| !! | TTTTTCCAAATAAGCAACAT+CGG | + | chr1.3:25336207-25336226 | None:intergenic | 25.0% |
| !!! | CTACTTGGTTTGTTTATTTT+TGG | - | chr1.3:25334083-25334102 | MS.gene063225:CDS | 25.0% |
| AAATCACTTTCCTTTGCAAT+TGG | - | chr1.3:25333936-25333955 | MS.gene063225:CDS | 30.0% | |
| AACTTATGATTCACCAAAGA+TGG | - | chr1.3:25335506-25335525 | MS.gene063225:CDS | 30.0% | |
| ACTTTACTCACTGAATTAAC+AGG | + | chr1.3:25335240-25335259 | None:intergenic | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | - | chr1.3:25334010-25334029 | MS.gene063225:CDS | 30.0% | |
| ATAAAGGGCGAAAATATACA+AGG | - | chr1.3:25335286-25335305 | MS.gene063225:CDS | 30.0% | |
| CTAATTGGATCACAAACAAT+TGG | + | chr1.3:25335900-25335919 | None:intergenic | 30.0% | |
| CTTTATTGTAGGAAGAAGAT+CGG | + | chr1.3:25335137-25335156 | None:intergenic | 30.0% | |
| GAAAAACATTTGATTGGAGA+TGG | - | chr1.3:25336455-25336474 | MS.gene063225:CDS | 30.0% | |
| GCTGCTGGTAAAAAATATAA+AGG | - | chr1.3:25335270-25335289 | MS.gene063225:CDS | 30.0% | |
| GGTGTGATGTAATGAAAAAA+AGG | + | chr1.3:25334471-25334490 | None:intergenic | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | - | chr1.3:25334888-25334907 | MS.gene063225:CDS | 30.0% | |
| TTTATTGTAGGAAGAAGATC+GGG | + | chr1.3:25335136-25335155 | None:intergenic | 30.0% | |
| ! | ATAGGACAGAAACTTTTTAG+TGG | - | chr1.3:25334248-25334267 | MS.gene063225:CDS | 30.0% |
| ! | GGAAAGTTTTACAAAACAGA+TGG | - | chr1.3:25334176-25334195 | MS.gene063225:CDS | 30.0% |
| ! | TCATAAAGCATCAGTTCAAT+CGG | - | chr1.3:25335709-25335728 | MS.gene063225:intron | 30.0% |
| ! | TTTGAAGCATCTTATTGTGA+TGG | - | chr1.3:25334409-25334428 | MS.gene063225:CDS | 30.0% |
| !! | CTTCTTTGAAGTCTATTGTT+GGG | - | chr1.3:25334596-25334615 | MS.gene063225:CDS | 30.0% |
| !! | TAAAGTTGGTAACTGTAATG+AGG | - | chr1.3:25335044-25335063 | MS.gene063225:CDS | 30.0% |
| !! | TCTTCTTTGAAGTCTATTGT+TGG | - | chr1.3:25334595-25334614 | MS.gene063225:CDS | 30.0% |
| !!! | TATTTGGTTTTTCTCATTCC+CGG | - | chr1.3:25334904-25334923 | MS.gene063225:CDS | 30.0% |
| !!! | TTTTAGTTTCAACATACCTC+AGG | - | chr1.3:25336058-25336077 | MS.gene063225:CDS | 30.0% |
| AAACAGATGGATATCGTAGA+TGG | - | chr1.3:25334189-25334208 | MS.gene063225:CDS | 35.0% | |
| AACGTTGTTGCATTCTGTTT+AGG | + | chr1.3:25335345-25335364 | None:intergenic | 35.0% | |
| AAGGAAAGTAAACCATAGCA+CGG | - | chr1.3:25335305-25335324 | MS.gene063225:CDS | 35.0% | |
| AATATATGCAAAGTGAGGAC+TGG | + | chr1.3:25334518-25334537 | None:intergenic | 35.0% | |
| AATATTTGACTGGAGGGTTT+CGG | - | chr1.3:25334767-25334786 | MS.gene063225:CDS | 35.0% | |
| ACCATCATTGTTCAGATCAT+GGG | - | chr1.3:25336411-25336430 | MS.gene063225:CDS | 35.0% | |
| ACGTTGTTGCATTCTGTTTA+GGG | + | chr1.3:25335344-25335363 | None:intergenic | 35.0% | |
| AGATACATGAGTAATCAAGC+GGG | + | chr1.3:25334297-25334316 | None:intergenic | 35.0% | |
| ATCATCATCATTCTCCTCAA+AGG | + | chr1.3:25333769-25333788 | None:intergenic | 35.0% | |
| ATCGCAAGATACTTTGTTAC+AGG | - | chr1.3:25334322-25334341 | MS.gene063225:CDS | 35.0% | |
| ATTCTTAGATAACAAGCGGA+TGG | - | chr1.3:25334130-25334149 | MS.gene063225:CDS | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | - | chr1.3:25335177-25335196 | MS.gene063225:CDS | 35.0% | |
| ATTGTTGAGAATTCTTCAGG+AGG | - | chr1.3:25335819-25335838 | MS.gene063225:intron | 35.0% | |
| CAAATGTAACGATCTCTTCT+GGG | - | chr1.3:25334801-25334820 | MS.gene063225:CDS | 35.0% | |
| CAGATACATGAGTAATCAAG+CGG | + | chr1.3:25334298-25334317 | None:intergenic | 35.0% | |
| CAGTTGTTCCTATTAAAAGG+AGG | - | chr1.3:25335760-25335779 | MS.gene063225:intron | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr1.3:25335170-25335189 | MS.gene063225:CDS | 35.0% | |
| CATTATGTATCCATGTGACT+GGG | + | chr1.3:25333971-25333990 | None:intergenic | 35.0% | |
| CGATAATGATGCAAACAAGA+TGG | - | chr1.3:25335629-25335648 | MS.gene063225:CDS | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr1.3:25335818-25335837 | None:intergenic | 35.0% | |
| CTTTCACTTAGAACGAATCT+TGG | - | chr1.3:25333891-25333910 | MS.gene063225:CDS | 35.0% | |
| GAACCTAAAATGCTGATATG+TGG | - | chr1.3:25335531-25335550 | MS.gene063225:CDS | 35.0% | |
| GTTTCTAAGTCATATGTGGA+GGG | - | chr1.3:25334547-25334566 | MS.gene063225:CDS | 35.0% | |
| TCAGAGTGCAGGAAAAAAAA+GGG | - | chr1.3:25334212-25334231 | MS.gene063225:CDS | 35.0% | |
| TCAGGTTTCTAAGTCATATG+TGG | - | chr1.3:25334543-25334562 | MS.gene063225:CDS | 35.0% | |
| TCATTATGTATCCATGTGAC+TGG | + | chr1.3:25333972-25333991 | None:intergenic | 35.0% | |
| TGATGCTTTATGATCCTCTT+TGG | + | chr1.3:25335702-25335721 | None:intergenic | 35.0% | |
| TGATTCTGCTGATGACTAAT+TGG | + | chr1.3:25335915-25335934 | None:intergenic | 35.0% | |
| TGGATACATAATGAAGAGTG+TGG | - | chr1.3:25333978-25333997 | MS.gene063225:CDS | 35.0% | |
| TTATGATTCACCAAAGATGG+TGG | - | chr1.3:25335509-25335528 | MS.gene063225:CDS | 35.0% | |
| TTATTGTAGGAAGAAGATCG+GGG | + | chr1.3:25335135-25335154 | None:intergenic | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | + | chr1.3:25335210-25335229 | None:intergenic | 35.0% | |
| TTCTTAGATAACAAGCGGAT+GGG | - | chr1.3:25334131-25334150 | MS.gene063225:CDS | 35.0% | |
| ! | AATGAAGAGTGTGGATATCA+TGG | - | chr1.3:25333987-25334006 | MS.gene063225:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | + | chr1.3:25335771-25335790 | None:intergenic | 35.0% |
| ! | TTGCCACATATCAGCATTTT+AGG | + | chr1.3:25335537-25335556 | None:intergenic | 35.0% |
| ! | TTGGTAACTGTAATGAGGAA+GGG | - | chr1.3:25335049-25335068 | MS.gene063225:CDS | 35.0% |
| ! | TTTTAGACATATCCGTGCTA+TGG | + | chr1.3:25335320-25335339 | None:intergenic | 35.0% |
| !! | AAAAATGATGGTAATGGCAG+AGG | - | chr1.3:25336103-25336122 | MS.gene063225:CDS | 35.0% |
| !! | ATGAAAAAAAGGTACTGGTG+TGG | + | chr1.3:25334460-25334479 | None:intergenic | 35.0% |
| !! | TGAAAAAAAGGTACTGGTGT+GGG | + | chr1.3:25334459-25334478 | None:intergenic | 35.0% |
| !!! | ATTTTAGGTTCCACCATCTT+TGG | + | chr1.3:25335522-25335541 | None:intergenic | 35.0% |
| AACAGCCTGACATAAATCCT+AGG | - | chr1.3:25336225-25336244 | MS.gene063225:CDS | 40.0% | |
| AATAAAACCGACAGTCACAG+AGG | - | chr1.3:25335567-25335586 | MS.gene063225:CDS | 40.0% | |
| AGTGCAGGAAAAAAAAGGGA+GGG | - | chr1.3:25334216-25334235 | MS.gene063225:CDS | 40.0% | |
| CACCATCATTGTTCAGATCA+TGG | - | chr1.3:25336410-25336429 | MS.gene063225:CDS | 40.0% | |
| CAGAAATTCCTTCCATGCTT+AGG | - | chr1.3:25333856-25333875 | MS.gene063225:CDS | 40.0% | |
| CCAAATGTAACGATCTCTTC+TGG | - | chr1.3:25334800-25334819 | MS.gene063225:CDS | 40.0% | |
| CCAGAAGAGATCGTTACATT+TGG | + | chr1.3:25334803-25334822 | None:intergenic | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr1.3:25335816-25335835 | MS.gene063225:intron | 40.0% | |
| GAAGACAAAGCTTTGCAAGT+TGG | + | chr1.3:25334724-25334743 | None:intergenic | 40.0% | |
| GACAAAAGTTCATGTTGCCT+CGG | + | chr1.3:25334275-25334294 | None:intergenic | 40.0% | |
| GATGGGTAAACCAATTGCAA+AGG | + | chr1.3:25333949-25333968 | None:intergenic | 40.0% | |
| GCATCTTCTAATTCAACTGG+CGG | + | chr1.3:25335438-25335457 | None:intergenic | 40.0% | |
| GGTACTCATGACCTATTCTA+GGG | + | chr1.3:25333833-25333852 | None:intergenic | 40.0% | |
| GGTTTCTAAGTCATATGTGG+AGG | - | chr1.3:25334546-25334565 | MS.gene063225:CDS | 40.0% | |
| GTAACATAGCCTCGATTCTT+TGG | + | chr1.3:25334874-25334893 | None:intergenic | 40.0% | |
| GTCAGAGTGCAGGAAAAAAA+AGG | - | chr1.3:25334211-25334230 | MS.gene063225:CDS | 40.0% | |
| TAGAATAGGTCATGAGTACC+AGG | - | chr1.3:25333833-25333852 | MS.gene063225:CDS | 40.0% | |
| TCATTGTTCAGATCATGGGA+AGG | - | chr1.3:25336415-25336434 | MS.gene063225:CDS | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | + | chr1.3:25336272-25336291 | None:intergenic | 40.0% | |
| TCCCATGATCTGAACAATGA+TGG | + | chr1.3:25336415-25336434 | None:intergenic | 40.0% | |
| TCCTTCCATGCTTAGGAAAT+CGG | - | chr1.3:25333863-25333882 | MS.gene063225:CDS | 40.0% | |
| TCGATGATAATCGACCAAAG+AGG | - | chr1.3:25335685-25335704 | MS.gene063225:intron | 40.0% | |
| TCGATTATCATCGAACACAC+AGG | + | chr1.3:25335679-25335698 | None:intergenic | 40.0% | |
| TCTTAGATAACAAGCGGATG+GGG | - | chr1.3:25334132-25334151 | MS.gene063225:CDS | 40.0% | |
| TCTTCATTTGATCCCCTTTC+TGG | + | chr1.3:25335075-25335094 | None:intergenic | 40.0% | |
| TGAAAGGATCTTTGTGTGTC+TGG | + | chr1.3:25336349-25336368 | None:intergenic | 40.0% | |
| TGGATCACAAACAATTGGGT+TGG | + | chr1.3:25335895-25335914 | None:intergenic | 40.0% | |
| TGGTACTCATGACCTATTCT+AGG | + | chr1.3:25333834-25333853 | None:intergenic | 40.0% | |
| TGTCTCCTAGGATTTATGTC+AGG | + | chr1.3:25336233-25336252 | None:intergenic | 40.0% | |
| TTCAATCGGAGAGTAAGATC+AGG | - | chr1.3:25335723-25335742 | MS.gene063225:intron | 40.0% | |
| TTGAAGTCTATTGTTGGGCT+TGG | - | chr1.3:25334601-25334620 | MS.gene063225:CDS | 40.0% | |
| ! | AATTCATGTCAATTGGCTCC+TGG | - | chr1.3:25334017-25334036 | MS.gene063225:CDS | 40.0% |
| ! | CTTGATTTGAGCCCTAGAAT+AGG | - | chr1.3:25333819-25333838 | MS.gene063225:CDS | 40.0% |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr1.3:25336142-25336161 | None:intergenic | 40.0% |
| ! | GAGAACCGATGTTGCTTATT+TGG | - | chr1.3:25336199-25336218 | MS.gene063225:CDS | 40.0% |
| ! | GATACCAATCGACTTTCTGA+CGG | - | chr1.3:25335375-25335394 | MS.gene063225:CDS | 40.0% |
| ! | GGAGCATCTTCTAATTCAAC+TGG | + | chr1.3:25335441-25335460 | None:intergenic | 40.0% |
| ! | GGTCTTTGGAGAGAATGTAA+GGG | - | chr1.3:25335474-25335493 | MS.gene063225:CDS | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr1.3:25334727-25334746 | MS.gene063225:CDS | 40.0% |
| ! | TGGTCTTTGGAGAGAATGTA+AGG | - | chr1.3:25335473-25335492 | MS.gene063225:CDS | 40.0% |
| ! | TTTCTAGTGCTTTGTCTCCT+AGG | + | chr1.3:25336245-25336264 | None:intergenic | 40.0% |
| ! | TTTTGTATCTGCATCAGTCC+AGG | + | chr1.3:25334057-25334076 | None:intergenic | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | - | chr1.3:25335255-25335274 | MS.gene063225:CDS | 40.0% |
| !! | AGAAACTTTTTAGTGGACCG+AGG | - | chr1.3:25334255-25334274 | MS.gene063225:CDS | 40.0% |
| !! | CTATTCTAGGGCTCAAATCA+AGG | + | chr1.3:25333821-25333840 | None:intergenic | 40.0% |
| !! | GTTGGTAACTGTAATGAGGA+AGG | - | chr1.3:25335048-25335067 | MS.gene063225:CDS | 40.0% |
| !! | TTCTGACGGAAGAGTATTGA+AGG | - | chr1.3:25335389-25335408 | MS.gene063225:CDS | 40.0% |
| AAGAGAGACCTTACTAGGCT+TGG | - | chr1.3:25334658-25334677 | MS.gene063225:CDS | 45.0% | |
| AAGGGAGGGAAACGTATGAT+AGG | - | chr1.3:25334230-25334249 | MS.gene063225:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | - | chr1.3:25336268-25336287 | MS.gene063225:CDS | 45.0% | |
| AGATACACCTCTGTGACTGT+CGG | + | chr1.3:25335577-25335596 | None:intergenic | 45.0% | |
| AGGAGAAGAGAGACCTTACT+AGG | - | chr1.3:25334653-25334672 | MS.gene063225:CDS | 45.0% | |
| ATGAAGCACGTTTCTCACGA+AGG | - | chr1.3:25333795-25333814 | MS.gene063225:CDS | 45.0% | |
| ATGTATCCATGTGACTGGGA+TGG | + | chr1.3:25333967-25333986 | None:intergenic | 45.0% | |
| CAAAGACCAGTAGTCGTTGT+GGG | + | chr1.3:25335462-25335481 | None:intergenic | 45.0% | |
| CCTCGAAAACTTCTCAACAC+CGG | + | chr1.3:25334926-25334945 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | - | chr1.3:25335200-25335219 | MS.gene063225:CDS | 45.0% | |
| CTCGAAAACTTCTCAACACC+GGG | + | chr1.3:25334925-25334944 | None:intergenic | 45.0% | |
| CTCGAGGAAGAAGCTAAAGT+TGG | - | chr1.3:25335030-25335049 | MS.gene063225:CDS | 45.0% | |
| CTTAGATAACAAGCGGATGG+GGG | - | chr1.3:25334133-25334152 | MS.gene063225:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | - | chr1.3:25334628-25334647 | MS.gene063225:CDS | 45.0% | |
| GAGTGCAGGAAAAAAAAGGG+AGG | - | chr1.3:25334215-25334234 | MS.gene063225:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | - | chr1.3:25335180-25335199 | MS.gene063225:CDS | 45.0% | |
| GCAACTCGAAAGCTAGAAGA+CGG | + | chr1.3:25335873-25335892 | None:intergenic | 45.0% | |
| GGTGTGGGATCAGATAATCT+AGG | - | chr1.3:25335840-25335859 | MS.gene063225:intron | 45.0% | |
| TAATGAGGAAGGGCCAGAAA+GGG | - | chr1.3:25335059-25335078 | MS.gene063225:CDS | 45.0% | |
| TCAGAATTCGACAGAACCTG+AGG | + | chr1.3:25336077-25336096 | None:intergenic | 45.0% | |
| TCCGATTTCCTAAGCATGGA+AGG | + | chr1.3:25333867-25333886 | None:intergenic | 45.0% | |
| TCCTCGAGCACGAGAATATT+CGG | + | chr1.3:25335018-25335037 | None:intergenic | 45.0% | |
| TCGAGGAGGAAACTTGTGAA+AGG | - | chr1.3:25334940-25334959 | MS.gene063225:CDS | 45.0% | |
| TCTGAGCAACCAAAGAATCG+AGG | - | chr1.3:25334862-25334881 | MS.gene063225:CDS | 45.0% | |
| TCTTCCGTCAGAAAGTCGAT+TGG | + | chr1.3:25335382-25335401 | None:intergenic | 45.0% | |
| TGAGAATTCTTCAGGAGGTG+TGG | - | chr1.3:25335824-25335843 | MS.gene063225:intron | 45.0% | |
| TGTATCCATGTGACTGGGAT+GGG | + | chr1.3:25333966-25333985 | None:intergenic | 45.0% | |
| ! | AATGCGGCTTTTCTCTTCCT+TGG | + | chr1.3:25335802-25335821 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr1.3:25334812-25334831 | MS.gene063225:CDS | 45.0% |
| ! | CACAGAGGTGTATCTAACAG+CGG | - | chr1.3:25335582-25335601 | MS.gene063225:CDS | 45.0% |
| ! | CTTTGGAGAGAATGTAAGGG+TGG | - | chr1.3:25335477-25335496 | MS.gene063225:CDS | 45.0% |
| ! | GAGAATTCTTCAGGAGGTGT+GGG | - | chr1.3:25335825-25335844 | MS.gene063225:intron | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | - | chr1.3:25334633-25334652 | MS.gene063225:CDS | 45.0% |
| !! | GTGTTGAGAAGTTTTCGAGG+AGG | - | chr1.3:25334926-25334945 | MS.gene063225:CDS | 45.0% |
| !! | TAAGCAACATCGGTTCTCAG+AGG | + | chr1.3:25336197-25336216 | None:intergenic | 45.0% |
| !! | TGCCTTTTGTTCGAGTACTG+CGG | + | chr1.3:25336379-25336398 | None:intergenic | 45.0% |
| AACTACTTCCTGAGTGGCAG+CGG | + | chr1.3:25336168-25336187 | None:intergenic | 50.0% | |
| AATGAGGAAGGGCCAGAAAG+GGG | - | chr1.3:25335060-25335079 | MS.gene063225:CDS | 50.0% | |
| ACCGAATATTCTCGTGCTCG+AGG | - | chr1.3:25335014-25335033 | MS.gene063225:CDS | 50.0% | |
| AGACAGAAGCTTGTCAGAGG+AGG | - | chr1.3:25335956-25335975 | MS.gene063225:CDS | 50.0% | |
| AGCAGACAGAAGCTTGTCAG+AGG | - | chr1.3:25335953-25335972 | MS.gene063225:CDS | 50.0% | |
| ATCGTAGATGGTCAGAGTGC+AGG | - | chr1.3:25334201-25334220 | MS.gene063225:CDS | 50.0% | |
| CAGTCCAGGAGCTACTCAAT+CGG | + | chr1.3:25334043-25334062 | None:intergenic | 50.0% | |
| CCAAAGACCAGTAGTCGTTG+TGG | + | chr1.3:25335463-25335482 | None:intergenic | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | + | chr1.3:25336174-25336193 | None:intergenic | 50.0% | |
| CTGCTCCGATTTCCTAAGCA+TGG | + | chr1.3:25333871-25333890 | None:intergenic | 50.0% | |
| CTTCTGTCTGCTGAAGAAGC+AGG | + | chr1.3:25335945-25335964 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | + | chr1.3:25335187-25335206 | None:intergenic | 50.0% | |
| GAGATTGACTGCTTGTGCCA+AGG | - | chr1.3:25335782-25335801 | MS.gene063225:intron | 50.0% | |
| GCATGGAAGGAATTTCTGCC+TGG | + | chr1.3:25333854-25333873 | None:intergenic | 50.0% | |
| GCCTGTGAAGAACAGTCGTA+AGG | - | chr1.3:25334687-25334706 | MS.gene063225:CDS | 50.0% | |
| GCCTTACGACTGTTCTTCAC+AGG | + | chr1.3:25334691-25334710 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | - | chr1.3:25335199-25335218 | MS.gene063225:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | - | chr1.3:25334622-25334641 | MS.gene063225:CDS | 50.0% | |
| GTAATGAGGAAGGGCCAGAA+AGG | - | chr1.3:25335058-25335077 | MS.gene063225:CDS | 50.0% | |
| GTACTGCGGCAAGGATTGAA+AGG | + | chr1.3:25336365-25336384 | None:intergenic | 50.0% | |
| GTTTACCCATCCCAGTCACA+TGG | - | chr1.3:25333958-25333977 | MS.gene063225:CDS | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | - | chr1.3:25336169-25336188 | MS.gene063225:CDS | 50.0% | |
| TGCCGCAGTACTCGAACAAA+AGG | - | chr1.3:25336374-25336393 | MS.gene063225:CDS | 50.0% | |
| ! | TTTGTTCGAGTACTGCGGCA+AGG | + | chr1.3:25336374-25336393 | None:intergenic | 50.0% |
| !! | CACAGGCGTGTTGATTTCTC+TGG | + | chr1.3:25335662-25335681 | None:intergenic | 50.0% |
| !! | CCACAACGACTACTGGTCTT+TGG | - | chr1.3:25335460-25335479 | MS.gene063225:CDS | 50.0% |
| !! | CCGGTGTTGAGAAGTTTTCG+AGG | - | chr1.3:25334923-25334942 | MS.gene063225:CDS | 50.0% |
| !! | TGTTGGGCTTGGTGTTCTTG+TGG | - | chr1.3:25334612-25334631 | MS.gene063225:CDS | 50.0% |
| AGGAAGAAGATCGGGGCTTG+AGG | + | chr1.3:25335128-25335147 | None:intergenic | 55.0% | |
| ATGTCTAACCGCTGCCACTC+AGG | - | chr1.3:25336157-25336176 | MS.gene063225:CDS | 55.0% | |
| CAACCTCTTGCCAGTAAGCG+GGG | + | chr1.3:25334838-25334857 | None:intergenic | 55.0% | |
| CCAACCTCTTGCCAGTAAGC+GGG | + | chr1.3:25334839-25334858 | None:intergenic | 55.0% | |
| GATGCTCCCACAACGACTAC+TGG | - | chr1.3:25335453-25335472 | MS.gene063225:CDS | 55.0% | |
| GCCAACCTCTTGCCAGTAAG+CGG | + | chr1.3:25334840-25334859 | None:intergenic | 55.0% | |
| GCTCGACACCAAGCCTAGTA+AGG | + | chr1.3:25334669-25334688 | None:intergenic | 55.0% | |
| GGAAGACGAGCAACGCCTAA+AGG | - | chr1.3:25336124-25336143 | MS.gene063225:CDS | 55.0% | |
| TGAGTGGCAGCGGTTAGACA+TGG | + | chr1.3:25336158-25336177 | None:intergenic | 55.0% | |
| !! | AGGTACTGGTGTGGGCATAG+AGG | + | chr1.3:25334451-25334470 | None:intergenic | 55.0% |
| AGCTGTTTGGCCCCGCTTAC+TGG | - | chr1.3:25334825-25334844 | MS.gene063225:CDS | 60.0% | |
| CAGGAGCTACTCAATCGGCC+AGG | + | chr1.3:25334038-25334057 | None:intergenic | 60.0% | |
| CCCGCTTACTGGCAAGAGGT+TGG | - | chr1.3:25334836-25334855 | MS.gene063225:CDS | 60.0% | |
| CTGGCCGATTGAGTAGCTCC+TGG | - | chr1.3:25334036-25334055 | MS.gene063225:CDS | 60.0% | |
| TGGCCCCGCTTACTGGCAAG+AGG | - | chr1.3:25334832-25334851 | MS.gene063225:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 25333759 | 25336490 | 25333759 | ID=MS.gene063225 |
| chr1.3 | mRNA | 25333759 | 25336490 | 25333759 | ID=MS.gene063225.t1;Parent=MS.gene063225 |
| chr1.3 | exon | 25335906 | 25336490 | 25335906 | ID=MS.gene063225.t1.exon1;Parent=MS.gene063225.t1 |
| chr1.3 | CDS | 25335906 | 25336490 | 25335906 | ID=cds.MS.gene063225.t1;Parent=MS.gene063225.t1 |
| chr1.3 | exon | 25333759 | 25335702 | 25333759 | ID=MS.gene063225.t1.exon2;Parent=MS.gene063225.t1 |
| chr1.3 | CDS | 25333759 | 25335702 | 25333759 | ID=cds.MS.gene063225.t1;Parent=MS.gene063225.t1 |
| Gene Sequence |
| Protein sequence |
