Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050942.t1 | XP_013467079.1 | 74.9 | 860 | 180 | 6 | 1 | 845 | 1 | 839 | 0.00E+00 | 1179.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050942.t1 | A0A072VGE3 | 74.9 | 860 | 180 | 6 | 1 | 845 | 1 | 839 | 0.0e+00 | 1179.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050942 | MS.gene78584 | PPI |
| MS.gene78585 | MS.gene050942 | PPI |
| MS.gene78587 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene050892 | PPI |
| MS.gene29351 | MS.gene050942 | PPI |
| MS.gene050889 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene050891 | PPI |
| MS.gene053360 | MS.gene050942 | PPI |
| MS.gene054416 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene072482 | PPI |
| MS.gene072481 | MS.gene050942 | PPI |
| MS.gene072483 | MS.gene050942 | PPI |
| MS.gene78584 | MS.gene050942 | PPI |
| MS.gene072484 | MS.gene050942 | PPI |
| MS.gene67159 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene78588 | PPI |
| MS.gene063225 | MS.gene050942 | PPI |
| MS.gene072542 | MS.gene050942 | PPI |
| MS.gene050890 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene050890 | PPI |
| MS.gene78588 | MS.gene050942 | PPI |
| MS.gene29350 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene78586 | PPI |
| MS.gene050942 | MS.gene072485 | PPI |
| MS.gene29352 | MS.gene050942 | PPI |
| MS.gene050738 | MS.gene050942 | PPI |
| MS.gene65461 | MS.gene050942 | PPI |
| MS.gene050893 | MS.gene050942 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050942.t1 | MTR_1g041895 | 80.947 | 845 | 139 | 6 | 16 | 845 | 2 | 839 | 0.0 | 1333 |
| MS.gene050942.t1 | MTR_7g113220 | 69.667 | 811 | 174 | 11 | 16 | 813 | 2 | 753 | 0.0 | 1035 |
| MS.gene050942.t1 | MTR_7g113280 | 67.500 | 800 | 193 | 8 | 16 | 797 | 2 | 752 | 0.0 | 1029 |
| MS.gene050942.t1 | MTR_7g113270 | 68.750 | 816 | 177 | 12 | 16 | 813 | 2 | 757 | 0.0 | 1019 |
| MS.gene050942.t1 | MTR_7g112390 | 77.174 | 460 | 37 | 2 | 145 | 604 | 1 | 392 | 0.0 | 675 |
| MS.gene050942.t1 | MTR_7g112390 | 85.259 | 251 | 13 | 1 | 593 | 843 | 478 | 704 | 8.82e-131 | 407 |
| MS.gene050942.t1 | MTR_7g113250 | 73.261 | 460 | 89 | 4 | 27 | 479 | 1 | 433 | 0.0 | 673 |
| MS.gene050942.t1 | MTR_7g113250 | 63.317 | 199 | 62 | 2 | 644 | 832 | 434 | 631 | 4.75e-69 | 241 |
| MS.gene050942.t1 | MTR_7g108470 | 41.826 | 471 | 225 | 7 | 18 | 440 | 6 | 475 | 3.67e-107 | 352 |
| MS.gene050942.t1 | MTR_4g119630 | 45.504 | 367 | 175 | 6 | 36 | 386 | 40 | 397 | 1.29e-94 | 305 |
| MS.gene050942.t1 | MTR_3g049350 | 79.882 | 169 | 27 | 2 | 318 | 479 | 3 | 171 | 6.43e-83 | 267 |
| MS.gene050942.t1 | MTR_3g049350 | 57.143 | 77 | 32 | 1 | 644 | 720 | 172 | 247 | 8.17e-18 | 84.7 |
| MS.gene050942.t1 | MTR_2g436970 | 35.045 | 331 | 175 | 8 | 40 | 369 | 17 | 308 | 3.58e-58 | 206 |
| MS.gene050942.t1 | MTR_7g113290 | 73.043 | 115 | 30 | 1 | 583 | 697 | 13 | 126 | 2.50e-43 | 160 |
| MS.gene050942.t1 | MTR_5g007800 | 49.315 | 73 | 26 | 2 | 751 | 823 | 12 | 73 | 1.92e-12 | 63.5 |
| MS.gene050942.t1 | MTR_4g119640 | 33.621 | 116 | 66 | 3 | 45 | 158 | 27 | 133 | 1.98e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050942.t1 | AT1G09040 | 44.045 | 445 | 197 | 7 | 37 | 436 | 35 | 472 | 2.70e-109 | 357 |
| MS.gene050942.t1 | AT1G09050 | 41.372 | 481 | 228 | 8 | 1 | 436 | 1 | 472 | 3.36e-106 | 348 |
| MS.gene050942.t1 | AT1G09050 | 41.372 | 481 | 228 | 8 | 1 | 436 | 1 | 472 | 3.36e-106 | 348 |
| MS.gene050942.t1 | AT2G47820 | 39.468 | 489 | 235 | 11 | 10 | 447 | 11 | 489 | 3.10e-101 | 332 |
| MS.gene050942.t1 | AT2G47820 | 39.468 | 489 | 235 | 11 | 10 | 447 | 11 | 489 | 3.10e-101 | 332 |
| MS.gene050942.t1 | AT1G55050 | 42.377 | 446 | 203 | 10 | 40 | 447 | 27 | 456 | 9.10e-98 | 326 |
| MS.gene050942.t1 | AT1G55050 | 42.377 | 446 | 203 | 10 | 40 | 447 | 27 | 456 | 9.10e-98 | 326 |
Find 166 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 7.1:+3703642 | MS.gene050942:CDS |
| CTACTTGGTTTGTTTATGTT+TGG | 0.213716 | 7.1:+3702739 | MS.gene050942:CDS |
| TGACTCTGCTGATTACTAAT+TGG | 0.231314 | 7.1:-3704660 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.1:+3704920 | MS.gene050942:CDS |
| TCTTCGAGCACGAGAATATT+AGG | 0.253225 | 7.1:-3703769 | None:intergenic |
| CCAAATGTAATGATCTCTTC+TGG | 0.254135 | 7.1:+3703554 | MS.gene050942:CDS |
| GTTTCTAGTGCTCTGTCTCC+TGG | 0.283035 | 7.1:-3704964 | None:intergenic |
| TACTTGGTTTGTTTATGTTT+GGG | 0.295382 | 7.1:+3702740 | MS.gene050942:CDS |
| ACTTTACTAACTGAATTTAC+AGG | 0.296069 | 7.1:-3703991 | None:intergenic |
| ATCGCAAGATACTTTGTTAC+AGG | 0.312695 | 7.1:+3702978 | MS.gene050942:CDS |
| AGCTGTTTGGCCCCGCTTAT+TGG | 0.313727 | 7.1:+3703579 | MS.gene050942:CDS |
| CAATCACTTTCCTTTGCAAT+TGG | 0.316197 | 7.1:+3702592 | MS.gene050942:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.1:+3703566 | MS.gene050942:CDS |
| CTAATTGGATCACAAACATT+TGG | 0.325977 | 7.1:-3704645 | None:intergenic |
| TGGTACTCATGCCCTATTCT+AGG | 0.331873 | 7.1:-3702487 | None:intergenic |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 7.1:+3703953 | MS.gene050942:CDS |
| ATGCAGTTGATCCTATTAAA+AGG | 0.341204 | 7.1:+3704505 | MS.gene050942:CDS |
| AATCTTTGACCGGAGGATTT+CGG | 0.347413 | 7.1:+3703521 | MS.gene050942:CDS |
| CATGTATTGATTACCGTCAT+TGG | 0.349047 | 7.1:-3704745 | None:intergenic |
| TGCATCATTGAGAATTCTTC+AGG | 0.352473 | 7.1:+3704564 | MS.gene050942:CDS |
| TGTCTCCTGGGATTTATATC+AGG | 0.358743 | 7.1:-3704951 | None:intergenic |
| TGAAAATAGCAAAATGATAA+AGG | 0.363910 | 7.1:+3704839 | MS.gene050942:CDS |
| TGAAAGGATCTTTGTGGGTC+TGG | 0.367041 | 7.1:-3705067 | None:intergenic |
| TGAGAATTCTTCAGGAGGTC+TGG | 0.367894 | 7.1:+3704572 | MS.gene050942:CDS |
| TAATTGGATCACAAACATTT+GGG | 0.375096 | 7.1:-3704644 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.378866 | 7.1:+3703924 | MS.gene050942:CDS |
| TAAAGATCATATAAAATTCA+TGG | 0.383096 | 7.1:+3703906 | MS.gene050942:CDS |
| CCAGAAGAGATCATTACATT+TGG | 0.384833 | 7.1:-3703554 | None:intergenic |
| ATCTTAGCTTCCACCATCAT+TGG | 0.387710 | 7.1:-3704258 | None:intergenic |
| TTTATTGTAGGTAGCAGATC+GGG | 0.388475 | 7.1:-3703887 | None:intergenic |
| TCTTCTTTGAAGTCTATTGT+TGG | 0.388479 | 7.1:+3703349 | MS.gene050942:CDS |
| ACTAGGTTTGGTGTCGAACC+TGG | 0.389475 | 7.1:+3703424 | MS.gene050942:CDS |
| TGCAAAGCTCTGTCTTCTCT+TGG | 0.389509 | 7.1:+3703481 | MS.gene050942:CDS |
| TTGATTTGAGTCCTAGAATA+GGG | 0.416775 | 7.1:+3702476 | MS.gene050942:CDS |
| AAGAGAGACCTTACTAGGTT+TGG | 0.424779 | 7.1:+3703412 | MS.gene050942:CDS |
| TGCCGCAAGGCTCGAACAAA+AGG | 0.426599 | 7.1:+3705095 | MS.gene050942:CDS |
| CTTGATTTGAGTCCTAGAAT+AGG | 0.429697 | 7.1:+3702475 | MS.gene050942:CDS |
| TTGAAGTCTATTGTTGGACT+TGG | 0.435074 | 7.1:+3703355 | MS.gene050942:CDS |
| AGACATCAATTCATGTCAAT+TGG | 0.437759 | 7.1:+3702666 | MS.gene050942:CDS |
| TTTCTAGTGCTCTGTCTCCT+GGG | 0.444972 | 7.1:-3704963 | None:intergenic |
| CCAACATCACAAGGGATTCT+CGG | 0.446123 | 7.1:-3704912 | None:intergenic |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 7.1:+3703382 | MS.gene050942:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.1:-3703625 | None:intergenic |
| CTGGCAGATTGAGTAGCTCC+TGG | 0.448809 | 7.1:+3702692 | MS.gene050942:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 7.1:-3703961 | None:intergenic |
| CAAATGTAATGATCTCTTCT+GGG | 0.451033 | 7.1:+3703555 | MS.gene050942:CDS |
| CAGATAAACTAGGAATTTCT+CGG | 0.462819 | 7.1:+3704598 | MS.gene050942:CDS |
| CAATGAGAAAGAACCAGAAA+AGG | 0.464058 | 7.1:+3703813 | MS.gene050942:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.1:+3702857 | MS.gene050942:CDS |
| GAAAAGCATTTGATTAGAGA+TGG | 0.466052 | 7.1:+3705176 | MS.gene050942:CDS |
| CCGAGAATCCCTTGTGATGT+TGG | 0.466160 | 7.1:+3704912 | MS.gene050942:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 7.1:-3703938 | None:intergenic |
| AGGAGAAGAGAGACCTTACT+AGG | 0.469113 | 7.1:+3703407 | MS.gene050942:CDS |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 7.1:+3702643 | MS.gene050942:CDS |
| TGGTCTTCATAGAGAAAGTA+AGG | 0.471893 | 7.1:+3704212 | MS.gene050942:CDS |
| TTTCAGTTTCAACATGCCTC+AGG | 0.472552 | 7.1:+3704803 | MS.gene050942:CDS |
| CCCGCTTATTGGCAAGAGGT+TGG | 0.473043 | 7.1:+3703590 | MS.gene050942:CDS |
| GAGAATTCTTCAGGAGGTCT+GGG | 0.474898 | 7.1:+3704573 | MS.gene050942:CDS |
| GACAAAAGTTCTTGTTGCCT+CGG | 0.476314 | 7.1:-3702928 | None:intergenic |
| TCATTATGTATCAATGTGAC+TGG | 0.481414 | 7.1:-3702625 | None:intergenic |
| CAGGAGCTACTCAATCTGCC+AGG | 0.486972 | 7.1:-3702691 | None:intergenic |
| AAGGATTGAAAGGATCTTTG+TGG | 0.490321 | 7.1:-3705073 | None:intergenic |
| ATCATTATCATTCTCTTCAA+AGG | 0.492444 | 7.1:-3702380 | None:intergenic |
| TGTTGGACTTGGTGTTCTTG+TGG | 0.492469 | 7.1:+3703366 | MS.gene050942:CDS |
| CCAACCTCTTGCCAATAAGC+GGG | 0.493049 | 7.1:-3703590 | None:intergenic |
| CTGCTCTGATTTCTTAAGCA+TGG | 0.494102 | 7.1:-3702524 | None:intergenic |
| TCAGGTGTCTAAGTCATTTG+TGG | 0.494888 | 7.1:+3703297 | MS.gene050942:intron |
| TAGAATAGGGCATGAGTACC+AGG | 0.495777 | 7.1:+3702489 | MS.gene050942:CDS |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 7.1:+3703931 | MS.gene050942:CDS |
| GCCAACCTCTTGCCAATAAG+CGG | 0.499224 | 7.1:-3703591 | None:intergenic |
| ATATGTCTAAAAGCATTAAA+CGG | 0.500870 | 7.1:+3704067 | MS.gene050942:CDS |
| TTTGCTCAGCCGAAATCCTC+CGG | 0.501641 | 7.1:-3703530 | None:intergenic |
| TGGATCACAAACATTTGGGT+TGG | 0.502365 | 7.1:-3704640 | None:intergenic |
| TTGTGTATCCGCATCACTCC+AGG | 0.502846 | 7.1:-3702710 | None:intergenic |
| GGAGCATCTTCTGATTCAAC+GGG | 0.506307 | 7.1:-3704177 | None:intergenic |
| GTTCGACACCAAACCTAGTA+AGG | 0.507637 | 7.1:-3703420 | None:intergenic |
| TGCACAGCTTCTGAATCAGC+AGG | 0.507765 | 7.1:-3702565 | None:intergenic |
| AGGATTGAAAGGATCTTTGT+GGG | 0.514560 | 7.1:-3705072 | None:intergenic |
| AGCAGACAGAAGCTTGGAAG+AGG | 0.521078 | 7.1:+3704701 | MS.gene050942:CDS |
| ATCGTCATTGTTCAGATCAC+GGG | 0.522866 | 7.1:+3705132 | MS.gene050942:CDS |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 7.1:+3704989 | MS.gene050942:CDS |
| GCCCCACGACTGTTCTTCCC+AGG | 0.523209 | 7.1:-3703442 | None:intergenic |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.1:-3703676 | None:intergenic |
| CTTTATTGTAGGTAGCAGAT+CGG | 0.523420 | 7.1:-3703888 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.528556 | 7.1:+3702845 | MS.gene050942:CDS |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.1:+3703694 | MS.gene050942:CDS |
| ACCTGATCTTACTCTCCGAT+TGG | 0.529963 | 7.1:-3704472 | None:intergenic |
| AGACAGAAGCTTGGAAGAGG+AGG | 0.535920 | 7.1:+3704704 | MS.gene050942:CDS |
| AATGAGAAAGAACCAGAAAA+GGG | 0.538329 | 7.1:+3703814 | MS.gene050942:CDS |
| TTCTTAGAGAACAAATCGAT+GGG | 0.539496 | 7.1:+3702787 | MS.gene050942:CDS |
| CTCGAAGAAGAAGCTAAAGT+TGG | 0.542576 | 7.1:+3703784 | MS.gene050942:CDS |
| TCTGATTTCTTAAGCATGGA+AGG | 0.545252 | 7.1:-3702520 | None:intergenic |
| CTATTCTAGGACTCAAATCA+AGG | 0.545701 | 7.1:-3702474 | None:intergenic |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.546113 | 7.1:+3703376 | MS.gene050942:CDS |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.546342 | 7.1:+3704884 | MS.gene050942:CDS |
| TCGCGAAGCATCAGTCCAAT+CGG | 0.548782 | 7.1:+3704457 | MS.gene050942:CDS |
| TCCTTTCAATCCTTGCCGCA+AGG | 0.548859 | 7.1:+3705082 | MS.gene050942:CDS |
| TTTGTTCGAGCCTTGCGGCA+AGG | 0.549687 | 7.1:-3705092 | None:intergenic |
| GCCTTGCGGCAAGGATTGAA+AGG | 0.549774 | 7.1:-3705083 | None:intergenic |
| AACTGATGATTCGCCAATGA+TGG | 0.550833 | 7.1:+3704245 | MS.gene050942:CDS |
| AGGAGCATCTTCTGATTCAA+CGG | 0.551120 | 7.1:-3704178 | None:intergenic |
| TGTGGAGCATGCATCTCTTG+AGG | 0.552068 | 7.1:+3702408 | MS.gene050942:CDS |
| ATTCTTAGAGAACAAATCGA+TGG | 0.554399 | 7.1:+3702786 | MS.gene050942:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 7.1:+3703954 | MS.gene050942:CDS |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 7.1:+3703387 | MS.gene050942:CDS |
| CATCGTCATTGTTCAGATCA+CGG | 0.563807 | 7.1:+3705131 | MS.gene050942:CDS |
| CTAGGTTTGGTGTCGAACCT+GGG | 0.565438 | 7.1:+3703425 | MS.gene050942:CDS |
| ATGTCTAACAGCTGCCACTC+AGG | 0.567399 | 7.1:+3704872 | MS.gene050942:CDS |
| TTCGTCAGCAGACAGAAGCT+TGG | 0.567530 | 7.1:+3704695 | MS.gene050942:CDS |
| AGGAGCTACTCAATCTGCCA+GGG | 0.569582 | 7.1:-3702690 | None:intergenic |
| TGTATCAATGTGACTGGGAT+GGG | 0.571927 | 7.1:-3702619 | None:intergenic |
| TGGCCCCGCTTATTGGCAAG+AGG | 0.575906 | 7.1:+3703586 | MS.gene050942:CDS |
| GAAATAATACAATCTTTGAC+CGG | 0.578933 | 7.1:+3703511 | MS.gene050942:CDS |
| ATGGAGCATGCGTCTCATGA+AGG | 0.580686 | 7.1:+3702451 | MS.gene050942:CDS |
| AATTCATGTCAATTGGCCCC+TGG | 0.580761 | 7.1:+3702673 | MS.gene050942:CDS |
| TCCAATCGGAGAGTAAGATC+AGG | 0.583223 | 7.1:+3704471 | MS.gene050942:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 7.1:-3704990 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.587239 | 7.1:-3704921 | None:intergenic |
| AAAGTTGATGTAGATGCTGC+TGG | 0.592230 | 7.1:+3704009 | MS.gene050942:CDS |
| GATGCTCCTACTGCTACTAC+TGG | 0.592956 | 7.1:+3704192 | MS.gene050942:CDS |
| AGATACACCTCTGCGACTGT+TGG | 0.594249 | 7.1:-3704313 | None:intergenic |
| AGGTAGCAGATCGGGGCTTG+AGG | 0.598766 | 7.1:-3703879 | None:intergenic |
| TGAAGACCAGTAGTAGCAGT+AGG | 0.600187 | 7.1:-3704198 | None:intergenic |
| AAAGATTGTATTATTTCACT+CGG | 0.605641 | 7.1:-3703505 | None:intergenic |
| TGATGATTCGCCAATGATGG+TGG | 0.608648 | 7.1:+3704248 | MS.gene050942:CDS |
| TGATACTGATGCAAACAAGA+TGG | 0.608686 | 7.1:+3704377 | MS.gene050942:CDS |
| ATGTATCAATGTGACTGGGA+TGG | 0.609324 | 7.1:-3702620 | None:intergenic |
| AACCTGGGAAGAACAGTCGT+GGG | 0.612237 | 7.1:+3703440 | MS.gene050942:CDS |
| TCAGAATTCGATGGAACCTG+AGG | 0.615327 | 7.1:-3704819 | None:intergenic |
| TTTGCTCAAGACATCACTAA+CGG | 0.620063 | 7.1:-3703734 | None:intergenic |
| GAACCTGGGAAGAACAGTCG+TGG | 0.620087 | 7.1:+3703439 | MS.gene050942:CDS |
| TTGATGATAATCAAGTGAAG+AGG | 0.620879 | 7.1:+3704433 | MS.gene050942:CDS |
| TTGATACATAATGAAGAGTG+TGG | 0.621005 | 7.1:+3702634 | MS.gene050942:CDS |
| GAGGAAAGTAAACCATGGCA+AGG | 0.627561 | 7.1:+3704044 | MS.gene050942:CDS |
| GACAGCCTGATATAAATCCC+AGG | 0.628120 | 7.1:+3704946 | MS.gene050942:CDS |
| GAGATTGACTGATTGTGCCA+AGG | 0.628845 | 7.1:+3704530 | MS.gene050942:CDS |
| ATCATTGAGAATTCTTCAGG+AGG | 0.629495 | 7.1:+3704567 | MS.gene050942:CDS |
| TTATTGTAGGTAGCAGATCG+GGG | 0.634121 | 7.1:-3703886 | None:intergenic |
| TGAGTGGCAGCTGTTAGACA+TGG | 0.636795 | 7.1:-3704870 | None:intergenic |
| ATAATACAATCTTTGACCGG+AGG | 0.640323 | 7.1:+3703514 | MS.gene050942:CDS |
| GCATCTTCTGATTCAACGGG+CGG | 0.643453 | 7.1:-3704174 | None:intergenic |
| CAACCTCTTGCCAATAAGCG+GGG | 0.645022 | 7.1:-3703589 | None:intergenic |
| GATGGGTAAGCCAATTGCAA+AGG | 0.645390 | 7.1:-3702602 | None:intergenic |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.1:+3702849 | MS.gene050942:CDS |
| CATTATGTATCAATGTGACT+GGG | 0.646100 | 7.1:-3702624 | None:intergenic |
| GTAGATGGTCGGAGTGCAGG+AGG | 0.647585 | 7.1:+3702860 | MS.gene050942:CDS |
| GAGTAGCTCCTGGAGTGATG+CGG | 0.647768 | 7.1:+3702702 | MS.gene050942:CDS |
| GAAGACAGAGCTTTGCAATG+TGG | 0.648974 | 7.1:-3703475 | None:intergenic |
| GCATGGAAGGAATTTCCACC+TGG | 0.654334 | 7.1:-3702507 | None:intergenic |
| GGTGTCTAAGTCATTTGTGG+AGG | 0.657517 | 7.1:+3703300 | MS.gene050942:intron |
| GGTCTGGGATCAGATAAACT+AGG | 0.658935 | 7.1:+3704588 | MS.gene050942:CDS |
| AATAAAACCAACAGTCGCAG+AGG | 0.660971 | 7.1:+3704306 | MS.gene050942:CDS |
| CGCAGAGGTGTATCTAACTG+TGG | 0.661071 | 7.1:+3704321 | MS.gene050942:CDS |
| CTTAGAGAACAAATCGATGG+GGG | 0.664727 | 7.1:+3702789 | MS.gene050942:CDS |
| GGAGCTACTCAATCTGCCAG+GGG | 0.669247 | 7.1:-3702689 | None:intergenic |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 7.1:-3704886 | None:intergenic |
| CAGTTGATCCTATTAAAAGG+AGG | 0.674014 | 7.1:+3704508 | MS.gene050942:CDS |
| TCTTAGAGAACAAATCGATG+GGG | 0.679364 | 7.1:+3702788 | MS.gene050942:CDS |
| TTGATTATCATCAAACACAC+AGG | 0.682319 | 7.1:-3704424 | None:intergenic |
| CATACGAGGAAAGTAAACCA+TGG | 0.695508 | 7.1:+3704039 | MS.gene050942:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.1:+3703616 | MS.gene050942:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 7.1:+3703934 | MS.gene050942:CDS |
| ACCTGGGAAGAACAGTCGTG+GGG | 0.700618 | 7.1:+3703441 | MS.gene050942:CDS |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.1:-3704920 | None:intergenic |
| AATAGGGCATGAGTACCAGG+TGG | 0.731216 | 7.1:+3702492 | MS.gene050942:CDS |
| ACATCACAAGGGATTCTCGG+AGG | 0.749240 | 7.1:-3704909 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGATCATATAAAATTCA+TGG | + | chr7.1:3703906-3703925 | MS.gene050942:CDS | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | - | chr7.1:3703902-3703921 | None:intergenic | 15.0% |
| !! | AAAGATTGTATTATTTCACT+CGG | - | chr7.1:3703508-3703527 | None:intergenic | 20.0% |
| !! | AAGAAAAACCAAATAATCTT+TGG | - | chr7.1:3703653-3703672 | None:intergenic | 20.0% |
| !! | TGAAAATAGCAAAATGATAA+AGG | + | chr7.1:3704839-3704858 | MS.gene050942:CDS | 20.0% |
| !!! | ATATGTCTAAAAGCATTAAA+CGG | + | chr7.1:3704067-3704086 | MS.gene050942:CDS | 20.0% |
| !!! | GAATGATAATGATATTTTCA+TGG | + | chr7.1:3702432-3702451 | MS.gene050942:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | - | chr7.1:3703650-3703669 | None:intergenic | 25.0% |
| ! | AATAGAGGTTCAAATAATCA+TGG | - | chr7.1:3703184-3703203 | None:intergenic | 25.0% |
| ! | ACTTTACTAACTGAATTTAC+AGG | - | chr7.1:3703994-3704013 | None:intergenic | 25.0% |
| ! | ATCATTATCATTCTCTTCAA+AGG | - | chr7.1:3702383-3702402 | None:intergenic | 25.0% |
| ! | CTTTGTGTATATTTATACTC+AGG | + | chr7.1:3703279-3703298 | MS.gene050942:intron | 25.0% |
| ! | GAAATAATACAATCTTTGAC+CGG | + | chr7.1:3703511-3703530 | MS.gene050942:CDS | 25.0% |
| ! | GTATAAATATACACAAAGTG+AGG | - | chr7.1:3703277-3703296 | None:intergenic | 25.0% |
| ! | TAATTGGATCACAAACATTT+GGG | - | chr7.1:3704647-3704666 | None:intergenic | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | - | chr7.1:3703213-3703232 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | + | chr7.1:3702811-3702830 | MS.gene050942:CDS | 25.0% |
| !!! | ATCATATGCTTCTTTTTTAC+TGG | - | chr7.1:3704352-3704371 | None:intergenic | 25.0% |
| !!! | GAATGATAATGATGTTTTTG+TGG | + | chr7.1:3702390-3702409 | MS.gene050942:CDS | 25.0% |
| !!! | TACTTGGTTTGTTTATGTTT+GGG | + | chr7.1:3702740-3702759 | MS.gene050942:CDS | 25.0% |
| !!! | TATTTGGTTTTTCTTATTCC+TGG | + | chr7.1:3703658-3703677 | MS.gene050942:CDS | 25.0% |
| AATGAGAAAGAACCAGAAAA+GGG | + | chr7.1:3703814-3703833 | MS.gene050942:CDS | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | + | chr7.1:3702666-3702685 | MS.gene050942:CDS | 30.0% | |
| ATGCAGTTGATCCTATTAAA+AGG | + | chr7.1:3704505-3704524 | MS.gene050942:CDS | 30.0% | |
| ATTCTTAGAGAACAAATCGA+TGG | + | chr7.1:3702786-3702805 | MS.gene050942:CDS | 30.0% | |
| CAAATGTAATGATCTCTTCT+GGG | + | chr7.1:3703555-3703574 | MS.gene050942:CDS | 30.0% | |
| CAATAAAAGGATAACTCACT+CGG | - | chr7.1:3703154-3703173 | None:intergenic | 30.0% | |
| CAGATAAACTAGGAATTTCT+CGG | + | chr7.1:3704598-3704617 | MS.gene050942:CDS | 30.0% | |
| CATTATGTATCAATGTGACT+GGG | - | chr7.1:3702627-3702646 | None:intergenic | 30.0% | |
| CTAATTGGATCACAAACATT+TGG | - | chr7.1:3704648-3704667 | None:intergenic | 30.0% | |
| GGTGTGATGTAATGAAAAAA+AGG | - | chr7.1:3703219-3703238 | None:intergenic | 30.0% | |
| TCATGGTACATCACAATAAA+AGG | - | chr7.1:3703167-3703186 | None:intergenic | 30.0% | |
| TCATTATGTATCAATGTGAC+TGG | - | chr7.1:3702628-3702647 | None:intergenic | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | + | chr7.1:3703642-3703661 | MS.gene050942:CDS | 30.0% | |
| TTCTTAGAGAACAAATCGAT+GGG | + | chr7.1:3702787-3702806 | MS.gene050942:CDS | 30.0% | |
| TTGATACATAATGAAGAGTG+TGG | + | chr7.1:3702634-3702653 | MS.gene050942:CDS | 30.0% | |
| TTGATTATCATCAAACACAC+AGG | - | chr7.1:3704427-3704446 | None:intergenic | 30.0% | |
| ! | GATACACAAAGTTTTCTACT+TGG | + | chr7.1:3702724-3702743 | MS.gene050942:CDS | 30.0% |
| ! | TTGATGATAATCAAGTGAAG+AGG | + | chr7.1:3704433-3704452 | MS.gene050942:CDS | 30.0% |
| ! | TTGATTTGAGTCCTAGAATA+GGG | + | chr7.1:3702476-3702495 | MS.gene050942:CDS | 30.0% |
| ! | TTTTCTGTCAGAAAGTCTAT+TGG | - | chr7.1:3704121-3704140 | None:intergenic | 30.0% |
| !! | ATGAAAAAAAGGTACTGGTA+TGG | - | chr7.1:3703208-3703227 | None:intergenic | 30.0% |
| !! | CTACTTGGTTTGTTTATGTT+TGG | + | chr7.1:3702739-3702758 | MS.gene050942:CDS | 30.0% |
| !! | GAAAAAAGCATTTCCAATGA+CGG | + | chr7.1:3704732-3704751 | MS.gene050942:CDS | 30.0% |
| !! | GAAAAGCATTTGATTAGAGA+TGG | + | chr7.1:3705176-3705195 | MS.gene050942:CDS | 30.0% |
| !! | TCTTCTTTGAAGTCTATTGT+TGG | + | chr7.1:3703349-3703368 | MS.gene050942:CDS | 30.0% |
| !! | TGAAAAAAAGGTACTGGTAT+GGG | - | chr7.1:3703207-3703226 | None:intergenic | 30.0% |
| !!! | TTGCTATTTTCAGAATTCGA+TGG | - | chr7.1:3704831-3704850 | None:intergenic | 30.0% |
| AAACATGAGATGAGATGAGA+TGG | - | chr7.1:3703016-3703035 | None:intergenic | 35.0% | |
| AAGGATTGAAAGGATCTTTG+TGG | - | chr7.1:3705076-3705095 | None:intergenic | 35.0% | |
| AGGATTGAAAGGATCTTTGT+GGG | - | chr7.1:3705075-3705094 | None:intergenic | 35.0% | |
| ATAATACAATCTTTGACCGG+AGG | + | chr7.1:3703514-3703533 | MS.gene050942:CDS | 35.0% | |
| ATCATTGAGAATTCTTCAGG+AGG | + | chr7.1:3704567-3704586 | MS.gene050942:CDS | 35.0% | |
| ATCGCAAGATACTTTGTTAC+AGG | + | chr7.1:3702978-3702997 | MS.gene050942:CDS | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | + | chr7.1:3703931-3703950 | MS.gene050942:CDS | 35.0% | |
| CAATCACTTTCCTTTGCAAT+TGG | + | chr7.1:3702592-3702611 | MS.gene050942:CDS | 35.0% | |
| CAATGAGAAAGAACCAGAAA+AGG | + | chr7.1:3703813-3703832 | MS.gene050942:CDS | 35.0% | |
| CAGTTGATCCTATTAAAAGG+AGG | + | chr7.1:3704508-3704527 | MS.gene050942:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | + | chr7.1:3703924-3703943 | MS.gene050942:CDS | 35.0% | |
| CCAAATGTAATGATCTCTTC+TGG | + | chr7.1:3703554-3703573 | MS.gene050942:CDS | 35.0% | |
| CCAGAAGAGATCATTACATT+TGG | - | chr7.1:3703557-3703576 | None:intergenic | 35.0% | |
| CTTTATTGTAGGTAGCAGAT+CGG | - | chr7.1:3703891-3703910 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | + | chr7.1:3703694-3703713 | MS.gene050942:CDS | 35.0% | |
| TCTGATTTCTTAAGCATGGA+AGG | - | chr7.1:3702523-3702542 | None:intergenic | 35.0% | |
| TCTTAGAGAACAAATCGATG+GGG | + | chr7.1:3702788-3702807 | MS.gene050942:CDS | 35.0% | |
| TGATACTGATGCAAACAAGA+TGG | + | chr7.1:3704377-3704396 | MS.gene050942:CDS | 35.0% | |
| TGCATCATTGAGAATTCTTC+AGG | + | chr7.1:3704564-3704583 | MS.gene050942:CDS | 35.0% | |
| TGGTCTTCATAGAGAAAGTA+AGG | + | chr7.1:3704212-3704231 | MS.gene050942:CDS | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | - | chr7.1:3703964-3703983 | None:intergenic | 35.0% | |
| TTGAAGTCTATTGTTGGACT+TGG | + | chr7.1:3703355-3703374 | MS.gene050942:CDS | 35.0% | |
| TTTATTGTAGGTAGCAGATC+GGG | - | chr7.1:3703890-3703909 | None:intergenic | 35.0% | |
| TTTGCTCAAGACATCACTAA+CGG | - | chr7.1:3703737-3703756 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | + | chr7.1:3702845-3702864 | MS.gene050942:CDS | 35.0% |
| ! | AATGAAGAGTGTGGATATCA+TGG | + | chr7.1:3702643-3702662 | MS.gene050942:CDS | 35.0% |
| ! | ACAGGACAGAAACTTTTTAC+TGG | + | chr7.1:3702904-3702923 | MS.gene050942:CDS | 35.0% |
| ! | CTTGATTTGAGTCCTAGAAT+AGG | + | chr7.1:3702475-3702494 | MS.gene050942:CDS | 35.0% |
| ! | GGAGAGTTTTACAAAACTGA+TGG | + | chr7.1:3702832-3702851 | MS.gene050942:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | - | chr7.1:3704519-3704538 | None:intergenic | 35.0% |
| ! | TCTTCATTTGATCCCTTTTC+TGG | - | chr7.1:3703829-3703848 | None:intergenic | 35.0% |
| ! | TGACTCTGCTGATTACTAAT+TGG | - | chr7.1:3704663-3704682 | None:intergenic | 35.0% |
| ! | TTTTAGACATATCCTTGCCA+TGG | - | chr7.1:3704059-3704078 | None:intergenic | 35.0% |
| !! | CATGTATTGATTACCGTCAT+TGG | - | chr7.1:3704748-3704767 | None:intergenic | 35.0% |
| !! | CTATTCTAGGACTCAAATCA+AGG | - | chr7.1:3702477-3702496 | None:intergenic | 35.0% |
| AACTGATGATTCGCCAATGA+TGG | + | chr7.1:3704245-3704264 | MS.gene050942:CDS | 40.0% | |
| AAGAGAGACCTTACTAGGTT+TGG | + | chr7.1:3703412-3703431 | MS.gene050942:CDS | 40.0% | |
| AATAAAACCAACAGTCGCAG+AGG | + | chr7.1:3704306-3704325 | MS.gene050942:CDS | 40.0% | |
| AATCTTTGACCGGAGGATTT+CGG | + | chr7.1:3703521-3703540 | MS.gene050942:CDS | 40.0% | |
| ATCGTCATTGTTCAGATCAC+GGG | + | chr7.1:3705132-3705151 | MS.gene050942:CDS | 40.0% | |
| ATCTTAGCTTCCACCATCAT+TGG | - | chr7.1:3704261-3704280 | None:intergenic | 40.0% | |
| ATGTATCAATGTGACTGGGA+TGG | - | chr7.1:3702623-3702642 | None:intergenic | 40.0% | |
| CATACGAGGAAAGTAAACCA+TGG | + | chr7.1:3704039-3704058 | MS.gene050942:CDS | 40.0% | |
| CATCGTCATTGTTCAGATCA+CGG | + | chr7.1:3705131-3705150 | MS.gene050942:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | - | chr7.1:3704923-3704942 | None:intergenic | 40.0% | |
| CTCGAAGAAGAAGCTAAAGT+TGG | + | chr7.1:3703784-3703803 | MS.gene050942:CDS | 40.0% | |
| CTGCTCTGATTTCTTAAGCA+TGG | - | chr7.1:3702527-3702546 | None:intergenic | 40.0% | |
| CTGCTGGTAAAAAACATACG+AGG | + | chr7.1:3704025-3704044 | MS.gene050942:CDS | 40.0% | |
| CTTAGAGAACAAATCGATGG+GGG | + | chr7.1:3702789-3702808 | MS.gene050942:CDS | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | - | chr7.1:3703679-3703698 | None:intergenic | 40.0% | |
| GACAAAAGTTCTTGTTGCCT+CGG | - | chr7.1:3702931-3702950 | None:intergenic | 40.0% | |
| GCTCTGTGCATTTGATACAA+TGG | + | chr7.1:3703111-3703130 | MS.gene050942:intron | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | - | chr7.1:3703628-3703647 | None:intergenic | 40.0% | |
| TCAGGTGTCTAAGTCATTTG+TGG | + | chr7.1:3703297-3703316 | MS.gene050942:intron | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | - | chr7.1:3704924-3704943 | None:intergenic | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | - | chr7.1:3704993-3705012 | None:intergenic | 40.0% | |
| TCTTCGAGCACGAGAATATT+AGG | - | chr7.1:3703772-3703791 | None:intergenic | 40.0% | |
| TGGATCACAAACATTTGGGT+TGG | - | chr7.1:3704643-3704662 | None:intergenic | 40.0% | |
| TGTATCAATGTGACTGGGAT+GGG | - | chr7.1:3702622-3702641 | None:intergenic | 40.0% | |
| TGTCTCCTGGGATTTATATC+AGG | - | chr7.1:3704954-3704973 | None:intergenic | 40.0% | |
| TTATTGTAGGTAGCAGATCG+GGG | - | chr7.1:3703889-3703908 | None:intergenic | 40.0% | |
| TTTCAGTTTCAACATGCCTC+AGG | + | chr7.1:3704803-3704822 | MS.gene050942:CDS | 40.0% | |
| ! | AGAAACTTTTTACTGGACCG+AGG | + | chr7.1:3702911-3702930 | MS.gene050942:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | + | chr7.1:3702849-3702868 | MS.gene050942:CDS | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | + | chr7.1:3704009-3704028 | MS.gene050942:CDS | 40.0% |
| !! | AGGAGCATCTTCTGATTCAA+CGG | - | chr7.1:3704181-3704200 | None:intergenic | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | + | chr7.1:3703677-3703696 | MS.gene050942:CDS | 40.0% |
| !!! | CACAGGCGTGTTGATTTTTA+TGG | - | chr7.1:3704410-3704429 | None:intergenic | 40.0% |
| AATTCATGTCAATTGGCCCC+TGG | + | chr7.1:3702673-3702692 | MS.gene050942:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | + | chr7.1:3704989-3705008 | MS.gene050942:CDS | 45.0% | |
| ACCTGATCTTACTCTCCGAT+TGG | - | chr7.1:3704475-3704494 | None:intergenic | 45.0% | |
| AGGAGAAGAGAGACCTTACT+AGG | + | chr7.1:3703407-3703426 | MS.gene050942:CDS | 45.0% | |
| CCAACATCACAAGGGATTCT+CGG | - | chr7.1:3704915-3704934 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | + | chr7.1:3703954-3703973 | MS.gene050942:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | + | chr7.1:3703382-3703401 | MS.gene050942:CDS | 45.0% | |
| GAAGACAGAGCTTTGCAATG+TGG | - | chr7.1:3703478-3703497 | None:intergenic | 45.0% | |
| GACAGCCTGATATAAATCCC+AGG | + | chr7.1:3704946-3704965 | MS.gene050942:CDS | 45.0% | |
| GAGAATTCTTCAGGAGGTCT+GGG | + | chr7.1:3704573-3704592 | MS.gene050942:CDS | 45.0% | |
| GAGATTGACTGATTGTGCCA+AGG | + | chr7.1:3704530-3704549 | MS.gene050942:CDS | 45.0% | |
| GAGGAAAGTAAACCATGGCA+AGG | + | chr7.1:3704044-3704063 | MS.gene050942:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | + | chr7.1:3703934-3703953 | MS.gene050942:CDS | 45.0% | |
| GATGGGTAAGCCAATTGCAA+AGG | - | chr7.1:3702605-3702624 | None:intergenic | 45.0% | |
| GGTGTCTAAGTCATTTGTGG+AGG | + | chr7.1:3703300-3703319 | MS.gene050942:intron | 45.0% | |
| GTTCGACACCAAACCTAGTA+AGG | - | chr7.1:3703423-3703442 | None:intergenic | 45.0% | |
| TAGAATAGGGCATGAGTACC+AGG | + | chr7.1:3702489-3702508 | MS.gene050942:CDS | 45.0% | |
| TCAGAATTCGATGGAACCTG+AGG | - | chr7.1:3704822-3704841 | None:intergenic | 45.0% | |
| TCCAATCGGAGAGTAAGATC+AGG | + | chr7.1:3704471-3704490 | MS.gene050942:CDS | 45.0% | |
| TGAAAGGATCTTTGTGGGTC+TGG | - | chr7.1:3705070-3705089 | None:intergenic | 45.0% | |
| TGAAGACCAGTAGTAGCAGT+AGG | - | chr7.1:3704201-3704220 | None:intergenic | 45.0% | |
| TGAGAATTCTTCAGGAGGTC+TGG | + | chr7.1:3704572-3704591 | MS.gene050942:CDS | 45.0% | |
| TGATGATTCGCCAATGATGG+TGG | + | chr7.1:3704248-3704267 | MS.gene050942:CDS | 45.0% | |
| TGCAAAGCTCTGTCTTCTCT+TGG | + | chr7.1:3703481-3703500 | MS.gene050942:CDS | 45.0% | |
| TGGTACTCATGCCCTATTCT+AGG | - | chr7.1:3702490-3702509 | None:intergenic | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | + | chr7.1:3703566-3703585 | MS.gene050942:CDS | 45.0% |
| ! | GATGCAGCTTTTCTCTTCCT+TGG | - | chr7.1:3704550-3704569 | None:intergenic | 45.0% |
| ! | GGAGCATCTTCTGATTCAAC+GGG | - | chr7.1:3704180-3704199 | None:intergenic | 45.0% |
| ! | GGTCTGGGATCAGATAAACT+AGG | + | chr7.1:3704588-3704607 | MS.gene050942:CDS | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+GGG | - | chr7.1:3704966-3704985 | None:intergenic | 45.0% |
| !! | AGGTACTGGTATGGGAATAG+AGG | - | chr7.1:3703199-3703218 | None:intergenic | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | + | chr7.1:3704920-3704939 | MS.gene050942:CDS | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | + | chr7.1:3703387-3703406 | MS.gene050942:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | + | chr7.1:3703616-3703635 | MS.gene050942:CDS | 45.0% |
| !! | TGTTGGACTTGGTGTTCTTG+TGG | + | chr7.1:3703366-3703385 | MS.gene050942:CDS | 45.0% |
| AAAGGGGGGAAACGTATGAC+AGG | + | chr7.1:3702886-3702905 | MS.gene050942:CDS | 50.0% | |
| AACCTGGGAAGAACAGTCGT+GGG | + | chr7.1:3703440-3703459 | MS.gene050942:CDS | 50.0% | |
| AATAGGGCATGAGTACCAGG+TGG | + | chr7.1:3702492-3702511 | MS.gene050942:CDS | 50.0% | |
| ACATCACAAGGGATTCTCGG+AGG | - | chr7.1:3704912-3704931 | None:intergenic | 50.0% | |
| AGACAGAAGCTTGGAAGAGG+AGG | + | chr7.1:3704704-3704723 | MS.gene050942:CDS | 50.0% | |
| AGATACACCTCTGCGACTGT+TGG | - | chr7.1:3704316-3704335 | None:intergenic | 50.0% | |
| AGCAGACAGAAGCTTGGAAG+AGG | + | chr7.1:3704701-3704720 | MS.gene050942:CDS | 50.0% | |
| AGGAGCTACTCAATCTGCCA+GGG | - | chr7.1:3702693-3702712 | None:intergenic | 50.0% | |
| AGTGCAGGAGGAAAAAAGGG+GGG | + | chr7.1:3702872-3702891 | MS.gene050942:CDS | 50.0% | |
| ATGGAGCATGCGTCTCATGA+AGG | + | chr7.1:3702451-3702470 | MS.gene050942:CDS | 50.0% | |
| ATGTCTAACAGCTGCCACTC+AGG | + | chr7.1:3704872-3704891 | MS.gene050942:CDS | 50.0% | |
| CAACCTCTTGCCAATAAGCG+GGG | - | chr7.1:3703592-3703611 | None:intergenic | 50.0% | |
| CACACACACACACACACAAC+TGG | - | chr7.1:3703240-3703259 | None:intergenic | 50.0% | |
| CCAACCTCTTGCCAATAAGC+GGG | - | chr7.1:3703593-3703612 | None:intergenic | 50.0% | |
| CCGAGAATCCCTTGTGATGT+TGG | + | chr7.1:3704912-3704931 | MS.gene050942:CDS | 50.0% | |
| CGGAGTGCAGGAGGAAAAAA+GGG | + | chr7.1:3702869-3702888 | MS.gene050942:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | - | chr7.1:3704889-3704908 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | - | chr7.1:3703941-3703960 | None:intergenic | 50.0% | |
| GAGTGCAGGAGGAAAAAAGG+GGG | + | chr7.1:3702871-3702890 | MS.gene050942:CDS | 50.0% | |
| GATGCTCCTACTGCTACTAC+TGG | + | chr7.1:3704192-3704211 | MS.gene050942:CDS | 50.0% | |
| GCATCTTCTGATTCAACGGG+CGG | - | chr7.1:3704177-3704196 | None:intergenic | 50.0% | |
| GCATGGAAGGAATTTCCACC+TGG | - | chr7.1:3702510-3702529 | None:intergenic | 50.0% | |
| GCCAACCTCTTGCCAATAAG+CGG | - | chr7.1:3703594-3703613 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | + | chr7.1:3703953-3703972 | MS.gene050942:CDS | 50.0% | |
| GGAGTGCAGGAGGAAAAAAG+GGG | + | chr7.1:3702870-3702889 | MS.gene050942:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | + | chr7.1:3703376-3703395 | MS.gene050942:CDS | 50.0% | |
| TCCTTTCAATCCTTGCCGCA+AGG | + | chr7.1:3705082-3705101 | MS.gene050942:CDS | 50.0% | |
| TCGGAGTGCAGGAGGAAAAA+AGG | + | chr7.1:3702868-3702887 | MS.gene050942:CDS | 50.0% | |
| TGAGTGGCAGCTGTTAGACA+TGG | - | chr7.1:3704873-3704892 | None:intergenic | 50.0% | |
| TGCACAGCTTCTGAATCAGC+AGG | - | chr7.1:3702568-3702587 | None:intergenic | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | + | chr7.1:3704884-3704903 | MS.gene050942:CDS | 50.0% | |
| TGTGGAGCATGCATCTCTTG+AGG | + | chr7.1:3702408-3702427 | MS.gene050942:CDS | 50.0% | |
| TTCGTCAGCAGACAGAAGCT+TGG | + | chr7.1:3704695-3704714 | MS.gene050942:CDS | 50.0% | |
| TTGTGTATCCGCATCACTCC+AGG | - | chr7.1:3702713-3702732 | None:intergenic | 50.0% | |
| TTTGCTCAGCCGAAATCCTC+CGG | - | chr7.1:3703533-3703552 | None:intergenic | 50.0% | |
| ! | CGCAGAGGTGTATCTAACTG+TGG | + | chr7.1:3704321-3704340 | MS.gene050942:CDS | 50.0% |
| ! | TCGCGAAGCATCAGTCCAAT+CGG | + | chr7.1:3704457-3704476 | MS.gene050942:CDS | 50.0% |
| ! | TGCCTTTTGTTCGAGCCTTG+CGG | - | chr7.1:3705100-3705119 | None:intergenic | 50.0% |
| !! | ACTAGGTTTGGTGTCGAACC+TGG | + | chr7.1:3703424-3703443 | MS.gene050942:CDS | 50.0% |
| !! | CTAGGTTTGGTGTCGAACCT+GGG | + | chr7.1:3703425-3703444 | MS.gene050942:CDS | 50.0% |
| !! | GTTTCTAGTGCTCTGTCTCC+TGG | - | chr7.1:3704967-3704986 | None:intergenic | 50.0% |
| ACCTGGGAAGAACAGTCGTG+GGG | + | chr7.1:3703441-3703460 | MS.gene050942:CDS | 55.0% | |
| AGCTGTTTGGCCCCGCTTAT+TGG | + | chr7.1:3703579-3703598 | MS.gene050942:CDS | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | + | chr7.1:3702857-3702876 | MS.gene050942:CDS | 55.0% | |
| CAGGAGCTACTCAATCTGCC+AGG | - | chr7.1:3702694-3702713 | None:intergenic | 55.0% | |
| CCCGCTTATTGGCAAGAGGT+TGG | + | chr7.1:3703590-3703609 | MS.gene050942:CDS | 55.0% | |
| CTGGCAGATTGAGTAGCTCC+TGG | + | chr7.1:3702692-3702711 | MS.gene050942:CDS | 55.0% | |
| GAACCTGGGAAGAACAGTCG+TGG | + | chr7.1:3703439-3703458 | MS.gene050942:CDS | 55.0% | |
| GAGTAGCTCCTGGAGTGATG+CGG | + | chr7.1:3702702-3702721 | MS.gene050942:CDS | 55.0% | |
| GCCTTGCGGCAAGGATTGAA+AGG | - | chr7.1:3705086-3705105 | None:intergenic | 55.0% | |
| GGAGCTACTCAATCTGCCAG+GGG | - | chr7.1:3702692-3702711 | None:intergenic | 55.0% | |
| TGCCGCAAGGCTCGAACAAA+AGG | + | chr7.1:3705095-3705114 | MS.gene050942:CDS | 55.0% | |
| TTTGTTCGAGCCTTGCGGCA+AGG | - | chr7.1:3705095-3705114 | None:intergenic | 55.0% | |
| AGGTAGCAGATCGGGGCTTG+AGG | - | chr7.1:3703882-3703901 | None:intergenic | 60.0% | |
| GTAGATGGTCGGAGTGCAGG+AGG | + | chr7.1:3702860-3702879 | MS.gene050942:CDS | 60.0% | |
| TGGCCCCGCTTATTGGCAAG+AGG | + | chr7.1:3703586-3703605 | MS.gene050942:CDS | 60.0% | |
| GCCCCACGACTGTTCTTCCC+AGG | - | chr7.1:3703445-3703464 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3702373 | 3705211 | 3702373 | ID=MS.gene050942 |
| chr7.1 | mRNA | 3702373 | 3705211 | 3702373 | ID=MS.gene050942.t1;Parent=MS.gene050942 |
| chr7.1 | exon | 3702373 | 3702999 | 3702373 | ID=MS.gene050942.t1.exon1;Parent=MS.gene050942.t1 |
| chr7.1 | CDS | 3702373 | 3702999 | 3702373 | ID=cds.MS.gene050942.t1;Parent=MS.gene050942.t1 |
| chr7.1 | exon | 3703301 | 3705211 | 3703301 | ID=MS.gene050942.t1.exon2;Parent=MS.gene050942.t1 |
| chr7.1 | CDS | 3703301 | 3705211 | 3703301 | ID=cds.MS.gene050942.t1;Parent=MS.gene050942.t1 |
| Gene Sequence |
| Protein sequence |
