Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78584.t1 | XP_024627185.1 | 92.5 | 742 | 55 | 1 | 1 | 741 | 1 | 742 | 0.00E+00 | 1337.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78584.t1 | G7KYL3 | 92.5 | 742 | 55 | 1 | 1 | 741 | 1 | 742 | 0.0e+00 | 1337.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65461 | MS.gene78584 | PPI |
| MS.gene78587 | MS.gene78584 | PPI |
| MS.gene050893 | MS.gene78584 | PPI |
| MS.gene29351 | MS.gene78584 | PPI |
| MS.gene050942 | MS.gene78584 | PPI |
| MS.gene050889 | MS.gene78584 | PPI |
| MS.gene78585 | MS.gene78584 | PPI |
| MS.gene78584 | MS.gene78588 | PPI |
| MS.gene053360 | MS.gene78584 | PPI |
| MS.gene054416 | MS.gene78584 | PPI |
| MS.gene78584 | MS.gene050890 | PPI |
| MS.gene072483 | MS.gene78584 | PPI |
| MS.gene072484 | MS.gene78584 | PPI |
| MS.gene78584 | MS.gene78586 | PPI |
| MS.gene78584 | MS.gene072485 | PPI |
| MS.gene67159 | MS.gene78584 | PPI |
| MS.gene78584 | MS.gene050892 | PPI |
| MS.gene063225 | MS.gene78584 | PPI |
| MS.gene072481 | MS.gene78584 | PPI |
| MS.gene072542 | MS.gene78584 | PPI |
| MS.gene78584 | MS.gene050942 | PPI |
| MS.gene050890 | MS.gene78584 | PPI |
| MS.gene78588 | MS.gene78584 | PPI |
| MS.gene29350 | MS.gene78584 | PPI |
| MS.gene29352 | MS.gene78584 | PPI |
| MS.gene050738 | MS.gene78584 | PPI |
| MS.gene78584 | MS.gene050891 | PPI |
| MS.gene78584 | MS.gene072482 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78584.t1 | MTR_7g113220 | 92.453 | 742 | 55 | 1 | 1 | 741 | 1 | 742 | 0.0 | 1352 |
| MS.gene78584.t1 | MTR_7g113270 | 88.282 | 751 | 73 | 3 | 1 | 741 | 1 | 746 | 0.0 | 1287 |
| MS.gene78584.t1 | MTR_1g041895 | 67.332 | 802 | 197 | 11 | 1 | 741 | 1 | 798 | 0.0 | 992 |
| MS.gene78584.t1 | MTR_7g113280 | 67.768 | 757 | 218 | 9 | 1 | 736 | 1 | 752 | 0.0 | 973 |
| MS.gene78584.t1 | MTR_7g113250 | 75.289 | 433 | 97 | 2 | 13 | 435 | 1 | 433 | 0.0 | 652 |
| MS.gene78584.t1 | MTR_7g113250 | 69.277 | 166 | 50 | 1 | 577 | 741 | 436 | 601 | 2.68e-65 | 229 |
| MS.gene78584.t1 | MTR_7g112390 | 62.642 | 439 | 90 | 6 | 105 | 538 | 1 | 370 | 1.52e-157 | 474 |
| MS.gene78584.t1 | MTR_7g112390 | 61.538 | 221 | 44 | 5 | 530 | 743 | 479 | 665 | 1.77e-63 | 225 |
| MS.gene78584.t1 | MTR_7g108470 | 47.550 | 347 | 165 | 5 | 64 | 400 | 136 | 475 | 1.61e-97 | 323 |
| MS.gene78584.t1 | MTR_4g119630 | 43.266 | 349 | 157 | 6 | 20 | 330 | 38 | 383 | 6.13e-86 | 280 |
| MS.gene78584.t1 | MTR_3g049350 | 73.373 | 169 | 36 | 1 | 276 | 435 | 3 | 171 | 1.95e-73 | 240 |
| MS.gene78584.t1 | MTR_3g049350 | 64.000 | 75 | 26 | 1 | 577 | 650 | 174 | 248 | 2.80e-21 | 94.7 |
| MS.gene78584.t1 | MTR_2g436970 | 40.328 | 305 | 166 | 10 | 26 | 327 | 17 | 308 | 2.11e-61 | 213 |
| MS.gene78584.t1 | MTR_7g113290 | 67.568 | 111 | 30 | 2 | 523 | 627 | 17 | 127 | 4.32e-36 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78584.t1 | AT1G09040 | 34.789 | 733 | 355 | 23 | 65 | 733 | 137 | 810 | 7.19e-104 | 340 |
| MS.gene78584.t1 | AT1G09050 | 35.063 | 713 | 373 | 22 | 71 | 733 | 143 | 815 | 3.51e-98 | 324 |
| MS.gene78584.t1 | AT1G09050 | 35.063 | 713 | 373 | 22 | 71 | 733 | 143 | 815 | 3.51e-98 | 324 |
| MS.gene78584.t1 | AT2G47820 | 46.176 | 340 | 167 | 8 | 74 | 403 | 152 | 485 | 4.47e-87 | 292 |
| MS.gene78584.t1 | AT2G47820 | 46.176 | 340 | 167 | 8 | 74 | 403 | 152 | 485 | 4.47e-87 | 292 |
| MS.gene78584.t1 | AT1G55050 | 38.661 | 463 | 203 | 10 | 19 | 419 | 20 | 463 | 2.14e-83 | 284 |
| MS.gene78584.t1 | AT1G55050 | 38.661 | 463 | 203 | 10 | 19 | 419 | 20 | 463 | 2.14e-83 | 284 |
Find 156 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGATGATTTCTGTTTAA+TGG | 0.114639 | 7.4:+3522302 | None:intergenic |
| ACAGATTTCAAACTCATTTA+TGG | 0.147220 | 7.4:-3523072 | MS.gene78584:intron |
| GTGGAAAGTCATCTGCTTTA+AGG | 0.169329 | 7.4:-3522416 | MS.gene78584:CDS |
| TGAAAATATCATTATAATTC+TGG | 0.213867 | 7.4:+3524260 | None:intergenic |
| TAACTGGACCACAAACATTT+TGG | 0.226397 | 7.4:+3521812 | None:intergenic |
| CTTTAGGCCTTGCTCATCTT+TGG | 0.228744 | 7.4:+3521594 | None:intergenic |
| CCCTTGCGATGTTGGTTCTT+TGG | 0.238317 | 7.4:-3521512 | MS.gene78584:CDS |
| TGTTACCTCCAATGATTATC+TGG | 0.258416 | 7.4:-3522733 | MS.gene78584:CDS |
| TTCAATATTTGACAGGATTT+CGG | 0.272657 | 7.4:-3522854 | MS.gene78584:CDS |
| CGGATTGTTGAGAATTCTTC+AGG | 0.282246 | 7.4:-3521877 | MS.gene78584:CDS |
| AGCTGTTTGGCCCCGCTTAC+TGG | 0.290051 | 7.4:-3522796 | MS.gene78584:CDS |
| GAGAATTCTTCAGGATGTTT+AGG | 0.290551 | 7.4:-3521868 | MS.gene78584:CDS |
| ATCATTATAATTCTGGTTAT+AGG | 0.291827 | 7.4:+3524267 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.309396 | 7.4:-3522891 | MS.gene78584:CDS |
| TCATTCTGCTGATGACTAAC+TGG | 0.315071 | 7.4:+3521796 | None:intergenic |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.4:-3522809 | MS.gene78584:CDS |
| GTTGCCTCGGTCCGGCAAAA+AGG | 0.319814 | 7.4:+3523852 | None:intergenic |
| ATGCAGCCGTTCCTATTAAA+AGG | 0.322696 | 7.4:-3521936 | MS.gene78584:CDS |
| CCTATTCGAGGACTGAATTC+AGG | 0.324603 | 7.4:+3524214 | None:intergenic |
| CGATTATTATCAAGATTATC+AGG | 0.334671 | 7.4:+3522018 | None:intergenic |
| ACTTTAGGTACCGAATTAAC+AGG | 0.355817 | 7.4:+3522378 | None:intergenic |
| TCAAAATCTACCTCAACTTT+AGG | 0.361337 | 7.4:+3522363 | None:intergenic |
| GAAATCTGTACCTGTTAATT+CGG | 0.363085 | 7.4:-3522388 | MS.gene78584:CDS |
| TCTTTGAGCACGAGAATATT+CGG | 0.365137 | 7.4:+3522606 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.371834 | 7.4:-3522445 | MS.gene78584:CDS |
| CTCATTGCAGCTACCAACTT+TGG | 0.379784 | 7.4:+3522572 | None:intergenic |
| TGTCTCCTCGGATTCATATC+AGG | 0.382635 | 7.4:+3521481 | None:intergenic |
| AATGAGGAAGAGCTAGAAAA+TGG | 0.383226 | 7.4:-3522555 | MS.gene78584:CDS |
| TTGAAGTCTACTGTTGGATT+CGG | 0.395238 | 7.4:-3523014 | MS.gene78584:CDS |
| TGGAAAGTCATCTGCTTTAA+GGG | 0.396000 | 7.4:-3522415 | MS.gene78584:CDS |
| ATGTCTAACATCTGCTTCTC+AGG | 0.403324 | 7.4:-3521560 | MS.gene78584:CDS |
| ACCAGGCTTGGCATGGAACC+TGG | 0.404253 | 7.4:-3522945 | MS.gene78584:CDS |
| TGGTATCAATAACCATGAAT+TGG | 0.410482 | 7.4:+3522451 | None:intergenic |
| AAAGGGAGAAAATGTATGAT+AGG | 0.419409 | 7.4:-3523881 | MS.gene78584:CDS |
| TAAACATCATATCCAATTCA+TGG | 0.423149 | 7.4:-3522463 | MS.gene78584:CDS |
| GATTCATTCTAAGCGAAATC+TGG | 0.424542 | 7.4:+3524146 | None:intergenic |
| TGGTCTTCCGAGAGAAAGTA+AGG | 0.433005 | 7.4:-3522169 | MS.gene78584:CDS |
| CTTTCCACCATGCACCAAAC+TGG | 0.434787 | 7.4:+3522431 | None:intergenic |
| CACTAACAGAATCAAAATAA+TGG | 0.438290 | 7.4:+3522655 | None:intergenic |
| TCTGTCTCTTTGGCACATGC+AGG | 0.442198 | 7.4:+3521401 | None:intergenic |
| TTGAGAATCCCTTGCGATGT+TGG | 0.445587 | 7.4:-3521520 | MS.gene78584:CDS |
| GAAGCATCTTCTAATTCAAC+TGG | 0.445905 | 7.4:+3522204 | None:intergenic |
| ATCATTAACTGTTAGAGCAT+TGG | 0.448693 | 7.4:-3521443 | MS.gene78584:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.4:+3522750 | None:intergenic |
| ATGAAAGGATCTTGTGTGTC+TGG | 0.451476 | 7.4:+3521365 | None:intergenic |
| TTTACTGTAAGTAGAAGATC+GGG | 0.453964 | 7.4:+3522482 | None:intergenic |
| AAGAATATCAATAAAACTGA+TGG | 0.458430 | 7.4:-3522084 | MS.gene78584:CDS |
| CCTGAATTCAGTCCTCGAAT+AGG | 0.459025 | 7.4:-3524214 | MS.gene78584:CDS |
| GAGATAATTCAATATTTGAC+AGG | 0.461702 | 7.4:-3522861 | MS.gene78584:CDS |
| CCCAGGTTCCATGCCAAGCC+TGG | 0.465012 | 7.4:+3522944 | None:intergenic |
| AGCAGACAGAAGTGTGGCAG+AGG | 0.467364 | 7.4:-3521758 | MS.gene78584:CDS |
| TGTTGGATTCGGCGTACTTG+TGG | 0.471367 | 7.4:-3523003 | MS.gene78584:CDS |
| CCAACCTCTTGCCAGTAAGC+GGG | 0.472085 | 7.4:+3522785 | None:intergenic |
| CAGGATGTTTAGGATTCTCT+CGG | 0.472696 | 7.4:-3521858 | MS.gene78584:CDS |
| ATCGTAGATGGTCGAAGTGC+AGG | 0.473282 | 7.4:-3523910 | MS.gene78584:CDS |
| GCCAACCTCTTGCCAGTAAG+CGG | 0.473500 | 7.4:+3522784 | None:intergenic |
| TTCATGGACCTTGCGTCTGA+TGG | 0.476929 | 7.4:-3524241 | MS.gene78584:CDS |
| AACGATTCATCGAGAACAAA+GGG | 0.478405 | 7.4:-3523985 | MS.gene78584:CDS |
| AGGAGAAGGGAGACCTTACC+AGG | 0.478906 | 7.4:-3522962 | MS.gene78584:CDS |
| AGAAGTGTGGCAGAGGATGA+TGG | 0.481252 | 7.4:-3521751 | MS.gene78584:CDS |
| GATGCAAACCAAAATGTTTG+TGG | 0.482630 | 7.4:-3521820 | MS.gene78584:CDS |
| CTTGTGGAAGCTGTAGGTAT+TGG | 0.483654 | 7.4:-3522987 | MS.gene78584:CDS |
| GAATCCAACAGTAGACTTCA+AGG | 0.489122 | 7.4:+3523016 | None:intergenic |
| AAAGCTTTGCAAGCTGGTGT+TGG | 0.490050 | 7.4:+3522903 | None:intergenic |
| AACGCTTGAACGTCCTTCCC+AGG | 0.490084 | 7.4:+3522927 | None:intergenic |
| TAGTTCATGTTGCCTCGGTC+CGG | 0.493742 | 7.4:+3523844 | None:intergenic |
| GATACCAATAGACTTTCTAA+AGG | 0.496879 | 7.4:-3522267 | MS.gene78584:CDS |
| TCATAAAACATCAACTCAAT+CGG | 0.499106 | 7.4:-3521984 | MS.gene78584:CDS |
| TTTCTAGAGCTCTGTCTCCT+CGG | 0.499320 | 7.4:+3521469 | None:intergenic |
| GAAGACAAAGCTTTGCAAGC+TGG | 0.500111 | 7.4:+3522897 | None:intergenic |
| CAAAGATGAGCAAGGCCTAA+AGG | 0.500939 | 7.4:-3521593 | MS.gene78584:CDS |
| CTGAAGAATTCTCAACAATC+CGG | 0.501236 | 7.4:+3521878 | None:intergenic |
| TGTAGGTATTGGTAAGGAGA+AGG | 0.501342 | 7.4:-3522976 | MS.gene78584:CDS |
| TTAACATCTTCTGAATCAGC+AGG | 0.504806 | 7.4:+3524124 | None:intergenic |
| TCTTCCTTGAAGTCTACTGT+TGG | 0.506496 | 7.4:-3523020 | MS.gene78584:CDS |
| ATCTCAAAATGCTCTGTCAC+AGG | 0.509630 | 7.4:-3523789 | MS.gene78584:intron |
| CCCGCTTACTGGCAAGAGGT+TGG | 0.511676 | 7.4:-3522785 | MS.gene78584:CDS |
| GTAGGTATTGGTAAGGAGAA+GGG | 0.518232 | 7.4:-3522975 | MS.gene78584:CDS |
| GTTTACTGTAAGTAGAAGAT+CGG | 0.518897 | 7.4:+3522481 | None:intergenic |
| TCCTTTCATTCCTTGCTGCA+AGG | 0.521926 | 7.4:-3521351 | MS.gene78584:CDS |
| TCGAATAGGTCATGCATACC+AGG | 0.522827 | 7.4:-3524200 | MS.gene78584:CDS |
| CTATTCGAGGACTGAATTCA+GGG | 0.522868 | 7.4:+3524215 | None:intergenic |
| CTTGAAAACTTCTCAACACC+GGG | 0.523734 | 7.4:+3522699 | None:intergenic |
| GCTTGGCATGGAACCTGGGA+AGG | 0.523977 | 7.4:-3522940 | MS.gene78584:CDS |
| AAGGGAGACCTTACCAGGCT+TGG | 0.525550 | 7.4:-3522957 | MS.gene78584:CDS |
| AAACTGATGGATATCGTAGA+TGG | 0.528556 | 7.4:-3523922 | MS.gene78584:CDS |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.4:-3522681 | MS.gene78584:CDS |
| TTTCACCTTCAAAATACCTC+AGG | 0.530787 | 7.4:-3521659 | MS.gene78584:CDS |
| CGAGGAAGGTGGAAGCTAAG+AGG | 0.536516 | 7.4:-3522122 | MS.gene78584:CDS |
| TTCATCGAGAACAAAGGGAT+GGG | 0.536748 | 7.4:-3523980 | MS.gene78584:CDS |
| GAAGAAGGAGAAGCCAAAGT+TGG | 0.537968 | 7.4:-3522585 | MS.gene78584:CDS |
| ATTGATACCAGTTTGGTGCA+TGG | 0.543194 | 7.4:-3522438 | MS.gene78584:CDS |
| GAGCCACCCTTACTTTCTCT+CGG | 0.544937 | 7.4:+3522162 | None:intergenic |
| GTTCCATGCCAAGCCTGGTA+AGG | 0.545240 | 7.4:+3522949 | None:intergenic |
| ATTCTCGTGCTCAAAGAAGA+AGG | 0.545546 | 7.4:-3522600 | MS.gene78584:CDS |
| GTGCCAAATCAGAGAAAAGC+CGG | 0.546346 | 7.4:-3521897 | MS.gene78584:CDS |
| GCCTTGCAGCAAGGAATGAA+AGG | 0.550996 | 7.4:+3521350 | None:intergenic |
| CCAGGCTTGGCATGGAACCT+GGG | 0.556437 | 7.4:-3522944 | MS.gene78584:CDS |
| GACAATAGTTCATGTTGCCT+CGG | 0.558165 | 7.4:+3523839 | None:intergenic |
| AATTGATGATTCAGCGAGGA+AGG | 0.558519 | 7.4:-3522136 | MS.gene78584:CDS |
| TGGCCCCGCTTACTGGCAAG+AGG | 0.562669 | 7.4:-3522789 | MS.gene78584:CDS |
| TCCAAAGAACCAACATCGCA+AGG | 0.564093 | 7.4:+3521511 | None:intergenic |
| CCTTGAAAACTTCTCAACAC+CGG | 0.567703 | 7.4:+3522698 | None:intergenic |
| GGAAGCTGTAGGTATTGGTA+AGG | 0.569902 | 7.4:-3522982 | MS.gene78584:CDS |
| TGGTATGCATGACCTATTCG+AGG | 0.570623 | 7.4:+3524202 | None:intergenic |
| ATCACTCCATGTGTCTGACA+TGG | 0.571306 | 7.4:+3524069 | None:intergenic |
| GATGCTTCTACGATGACTAC+TGG | 0.571992 | 7.4:-3522189 | MS.gene78584:CDS |
| CTCAATCGGAGAGTAAGATC+AGG | 0.574025 | 7.4:-3521970 | MS.gene78584:CDS |
| AGAATATCAATAAAACTGAT+GGG | 0.576074 | 7.4:-3522083 | MS.gene78584:CDS |
| GATTTCAAACTCATTTATGG+AGG | 0.576306 | 7.4:-3523069 | MS.gene78584:CDS |
| ATCGGGGCTTGAGGTAACAT+TGG | 0.580406 | 7.4:+3522499 | None:intergenic |
| ACATGGGTAAATCAATTGCA+AGG | 0.580943 | 7.4:+3524086 | None:intergenic |
| AAATATTGAATTATCTCACT+AGG | 0.581479 | 7.4:+3522867 | None:intergenic |
| AAATAGCAAAACAGTGGCAA+TGG | 0.582256 | 7.4:-3521620 | MS.gene78584:CDS |
| AGACCTTACCAGGCTTGGCA+TGG | 0.583144 | 7.4:-3522952 | MS.gene78584:CDS |
| TGCTGCAAGGCTCGTACATG+AGG | 0.587898 | 7.4:-3521338 | MS.gene78584:CDS |
| GAAGGTGGAAGCTAAGAGGC+TGG | 0.588548 | 7.4:-3522118 | MS.gene78584:CDS |
| TCACAGAAGGAATTTCCGCC+TGG | 0.588830 | 7.4:+3524182 | None:intergenic |
| AAACGATTCATCGAGAACAA+AGG | 0.592118 | 7.4:-3523986 | MS.gene78584:CDS |
| AAGTAGAAGATCGGGGCTTG+AGG | 0.596284 | 7.4:+3522490 | None:intergenic |
| TGAGATTCTTCAGAGACATG+AGG | 0.601689 | 7.4:+3523806 | None:intergenic |
| CAACCTCTTGCCAGTAAGCG+GGG | 0.601857 | 7.4:+3522786 | None:intergenic |
| TCATCGAGAACAAAGGGATG+GGG | 0.604030 | 7.4:-3523979 | MS.gene78584:CDS |
| ATTCATCGAGAACAAAGGGA+TGG | 0.604530 | 7.4:-3523981 | MS.gene78584:CDS |
| TGATGATTCAGCGAGGAAGG+TGG | 0.617263 | 7.4:-3522133 | MS.gene78584:CDS |
| TCTGATTTCGCAATCACAGA+AGG | 0.618033 | 7.4:+3524169 | None:intergenic |
| ATTTCAAACTCATTTATGGA+GGG | 0.618189 | 7.4:-3523068 | MS.gene78584:CDS |
| CAGGGTCTCCATCAGACGCA+AGG | 0.618276 | 7.4:+3524233 | None:intergenic |
| CATGTACGAGCCTTGCAGCA+AGG | 0.618706 | 7.4:+3521341 | None:intergenic |
| TAATTCGGTACCTAAAGTTG+AGG | 0.619420 | 7.4:-3522373 | MS.gene78584:CDS |
| TGAGAAGCAGATGTTAGACA+TGG | 0.623383 | 7.4:+3521562 | None:intergenic |
| ATTTACCCATGTCAGACACA+TGG | 0.629487 | 7.4:-3524075 | MS.gene78584:CDS |
| ACATCGCAAGGGATTCTCAA+AGG | 0.629989 | 7.4:+3521523 | None:intergenic |
| TCAGACTTCGATGGTACCTG+AGG | 0.633461 | 7.4:+3521643 | None:intergenic |
| GGCGTACTTGTGGAAGCTGT+AGG | 0.638020 | 7.4:-3522993 | MS.gene78584:CDS |
| CATGGGTAAATCAATTGCAA+GGG | 0.639589 | 7.4:+3524087 | None:intergenic |
| CAGGAAGGTAAACCATAGCA+AGG | 0.639889 | 7.4:-3522337 | MS.gene78584:CDS |
| CCAAAGAACCAACATCGCAA+GGG | 0.641761 | 7.4:+3521512 | None:intergenic |
| TCACTCCATGTGTCTGACAT+GGG | 0.643411 | 7.4:+3524070 | None:intergenic |
| CAAAGTTGGTAGCTGCAATG+AGG | 0.643587 | 7.4:-3522571 | MS.gene78584:CDS |
| AAATGAAGATGATCTGTCTG+AGG | 0.644403 | 7.4:-3522529 | MS.gene78584:CDS |
| ATGGCAGCCAAAGATGAGCA+AGG | 0.645766 | 7.4:-3521601 | MS.gene78584:CDS |
| CAGCCGTTCCTATTAAAAGG+AGG | 0.657310 | 7.4:-3521933 | MS.gene78584:CDS |
| AACAGCCTGATATGAATCCG+AGG | 0.663816 | 7.4:-3521486 | MS.gene78584:CDS |
| TGCAGTGGTGTATCTAACAG+TGG | 0.666374 | 7.4:-3522060 | MS.gene78584:CDS |
| GTCTGAAAATAGCAAAACAG+TGG | 0.675882 | 7.4:-3521626 | MS.gene78584:CDS |
| GGTCTTCCGAGAGAAAGTAA+GGG | 0.678263 | 7.4:-3522168 | MS.gene78584:CDS |
| CTTCCGAGAGAAAGTAAGGG+TGG | 0.678655 | 7.4:-3522165 | MS.gene78584:CDS |
| AATAAAACTGATGGGTGCAG+TGG | 0.689182 | 7.4:-3522075 | MS.gene78584:CDS |
| GATACCAGTTTGGTGCATGG+TGG | 0.695831 | 7.4:-3522435 | MS.gene78584:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.4:-3522759 | MS.gene78584:CDS |
| TTCTTCAGCAGACAGAAGTG+TGG | 0.699588 | 7.4:-3521764 | MS.gene78584:CDS |
| AATAGGTCATGCATACCAGG+CGG | 0.749167 | 7.4:-3524197 | MS.gene78584:CDS |
| TTACTGTAAGTAGAAGATCG+GGG | 0.758080 | 7.4:+3522483 | None:intergenic |
| TTGATAATAATCGATTAACG+AGG | 0.768384 | 7.4:-3522008 | MS.gene78584:CDS |
| CTACAATTGATGATTCAGCG+AGG | 0.781263 | 7.4:-3522140 | MS.gene78584:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATACTTTCATTTTATTA+TGG | - | chr7.4:3521648-3521667 | MS.gene78584:CDS | 10.0% |
| !! | CATAAAACTTCAAATAATTA+TGG | + | chr7.4:3522427-3522446 | None:intergenic | 15.0% |
| !! | TGAAAATATCATTATAATTC+TGG | + | chr7.4:3521347-3521366 | None:intergenic | 15.0% |
| !!! | ATTTAAAGAAAAAAAGGTAT+AGG | + | chr7.4:3522456-3522475 | None:intergenic | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.4:3521347-3521366 | MS.gene78584:CDS | 15.0% |
| !! | AAATATTGAATTATCTCACT+AGG | + | chr7.4:3522740-3522759 | None:intergenic | 20.0% |
| !! | AAGAATATCAATAAAACTGA+TGG | - | chr7.4:3523520-3523539 | MS.gene78584:intron | 20.0% |
| !! | ACAAATGATATATATCTAAC+TGG | + | chr7.4:3522483-3522502 | None:intergenic | 20.0% |
| !! | AGAATATCAATAAAACTGAT+GGG | - | chr7.4:3523521-3523540 | MS.gene78584:intron | 20.0% |
| !!! | AAATTTGAAACCACTAAATA+TGG | + | chr7.4:3521936-3521955 | None:intergenic | 20.0% |
| !!! | AAGGCTATATTTAAAATTAC+AGG | + | chr7.4:3522037-3522056 | None:intergenic | 20.0% |
| !!! | AGGCTATATTTAAAATTACA+GGG | + | chr7.4:3522036-3522055 | None:intergenic | 20.0% |
| !!! | ATAAGGGATAAATTATCTTT+TGG | - | chr7.4:3522212-3522231 | MS.gene78584:CDS | 20.0% |
| !!! | ATCATTATAATTCTGGTTAT+AGG | + | chr7.4:3521340-3521359 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAACAGTAATC+TGG | - | chr7.4:3522103-3522122 | MS.gene78584:CDS | 20.0% |
| !!! | TACTAGGTTTGTTTATTTTT+GGG | - | chr7.4:3521577-3521596 | MS.gene78584:CDS | 20.0% |
| ! | AAAAAGTAATGATCTCTTCT+GGG | - | chr7.4:3522784-3522803 | MS.gene78584:CDS | 25.0% |
| ! | AAGAAAAACCAGATAATCAT+TGG | + | chr7.4:3522882-3522901 | None:intergenic | 25.0% |
| ! | ACAGATTTCAAACTCATTTA+TGG | - | chr7.4:3522532-3522551 | MS.gene78584:CDS | 25.0% |
| ! | ATAGTTACAGTGTAATTACA+TGG | - | chr7.4:3522367-3522386 | MS.gene78584:CDS | 25.0% |
| ! | ATGCATTTCATTAACAATAG+AGG | + | chr7.4:3521870-3521889 | None:intergenic | 25.0% |
| ! | ATTTCAAACTCATTTATGGA+GGG | - | chr7.4:3522536-3522555 | MS.gene78584:CDS | 25.0% |
| ! | CACTAACAGAATCAAAATAA+TGG | + | chr7.4:3522952-3522971 | None:intergenic | 25.0% |
| ! | CGATTATTATCAAGATTATC+AGG | + | chr7.4:3523589-3523608 | None:intergenic | 25.0% |
| ! | GAGATAATTCAATATTTGAC+AGG | - | chr7.4:3522743-3522762 | MS.gene78584:CDS | 25.0% |
| ! | GGAGTGATTTAAAGAAAAAA+AGG | + | chr7.4:3522462-3522481 | None:intergenic | 25.0% |
| ! | GTAAAAAAATACAAGTCACA+AGG | - | chr7.4:3522188-3522207 | MS.gene78584:CDS | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | + | chr7.4:3522512-3522531 | None:intergenic | 25.0% |
| ! | TAAACATCATATCCAATTCA+TGG | - | chr7.4:3523141-3523160 | MS.gene78584:intron | 25.0% |
| ! | TCATAAAACATCAACTCAAT+CGG | - | chr7.4:3523620-3523639 | MS.gene78584:intron | 25.0% |
| ! | TGTCCTACATGTATAATAAT+TGG | - | chr7.4:3522135-3522154 | MS.gene78584:CDS | 25.0% |
| ! | TTCAATATTTGACAGGATTT+CGG | - | chr7.4:3522750-3522769 | MS.gene78584:CDS | 25.0% |
| !! | AAGAAAAAAAGGTATAGGTA+TGG | + | chr7.4:3522451-3522470 | None:intergenic | 25.0% |
| !! | CTTTGATGATTTCTGTTTAA+TGG | + | chr7.4:3523305-3523324 | None:intergenic | 25.0% |
| !! | GATTTCTGTTTAATGGTTTT+AGG | + | chr7.4:3523298-3523317 | None:intergenic | 25.0% |
| !! | TTGATAATAATCGATTAACG+AGG | - | chr7.4:3523596-3523615 | MS.gene78584:intron | 25.0% |
| !!! | GATACAAATAGTTTTGTACT+AGG | - | chr7.4:3521561-3521580 | MS.gene78584:CDS | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+TGG | - | chr7.4:3521576-3521595 | MS.gene78584:CDS | 25.0% |
| !!! | GTGACTTGTATTTTTTTACA+TGG | + | chr7.4:3522187-3522206 | None:intergenic | 25.0% |
| !!! | TTTTCCTTTAGAAAGTCTAT+TGG | + | chr7.4:3523344-3523363 | None:intergenic | 25.0% |
| AAAAACCAGATAATCATTGG+AGG | + | chr7.4:3522879-3522898 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+AGG | - | chr7.4:3521723-3521742 | MS.gene78584:CDS | 30.0% | |
| AATACAAGTCACAAGGAATA+AGG | - | chr7.4:3522195-3522214 | MS.gene78584:CDS | 30.0% | |
| AATATTACCACATTTCGAGA+AGG | + | chr7.4:3522069-3522088 | None:intergenic | 30.0% | |
| ACCACTAAATATGGTCATAT+AGG | + | chr7.4:3521927-3521946 | None:intergenic | 30.0% | |
| ATACAAGTCACAAGGAATAA+GGG | - | chr7.4:3522196-3522215 | MS.gene78584:CDS | 30.0% | |
| ATCAATATCAGAACTTGCAA+AGG | + | chr7.4:3522008-3522027 | None:intergenic | 30.0% | |
| ATCATTAACTGTTAGAGCAT+TGG | - | chr7.4:3524161-3524180 | MS.gene78584:CDS | 30.0% | |
| CAAAAAGTAATGATCTCTTC+TGG | - | chr7.4:3522783-3522802 | MS.gene78584:CDS | 30.0% | |
| CAGCCAATTATTATACATGT+AGG | + | chr7.4:3522141-3522160 | None:intergenic | 30.0% | |
| GAAATCTGTACCTGTTAATT+CGG | - | chr7.4:3523216-3523235 | MS.gene78584:intron | 30.0% | |
| GATACCAATAGACTTTCTAA+AGG | - | chr7.4:3523337-3523356 | MS.gene78584:intron | 30.0% | |
| GATTTCAAACTCATTTATGG+AGG | - | chr7.4:3522535-3522554 | MS.gene78584:CDS | 30.0% | |
| GTTAGTAAATCCGCAAAATA+TGG | + | chr7.4:3522165-3522184 | None:intergenic | 30.0% | |
| GTTTACTGTAAGTAGAAGAT+CGG | + | chr7.4:3523126-3523145 | None:intergenic | 30.0% | |
| TCAAAATCTACCTCAACTTT+AGG | + | chr7.4:3523244-3523263 | None:intergenic | 30.0% | |
| TGGTATCAATAACCATGAAT+TGG | + | chr7.4:3523156-3523175 | None:intergenic | 30.0% | |
| TTCATTAACAATAGAGGAGA+TGG | + | chr7.4:3521864-3521883 | None:intergenic | 30.0% | |
| TTTACTGTAAGTAGAAGATC+GGG | + | chr7.4:3523125-3523144 | None:intergenic | 30.0% | |
| TTTGTAACATTGAATTGCCT+AGG | + | chr7.4:3522284-3522303 | None:intergenic | 30.0% | |
| ! | GGAACATTTTACAAAACTGA+TGG | - | chr7.4:3521669-3521688 | MS.gene78584:CDS | 30.0% |
| ! | GTCAATTTCCTCCTTTTAAT+AGG | + | chr7.4:3523682-3523701 | None:intergenic | 30.0% |
| ! | TAACAGTAATCTGGTTTATG+TGG | - | chr7.4:3522112-3522131 | MS.gene78584:CDS | 30.0% |
| ! | TCTTTCTTTTTCTGTCTCTT+TGG | + | chr7.4:3524216-3524235 | None:intergenic | 30.0% |
| ! | TTTCCTCCTTTTAATAGGAA+CGG | + | chr7.4:3523677-3523696 | None:intergenic | 30.0% |
| !!! | ATTATCAGGTGCTTTTTTAC+TGG | + | chr7.4:3523575-3523594 | None:intergenic | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+CGG | - | chr7.4:3522887-3522906 | MS.gene78584:CDS | 30.0% |
| AAACGATTCATCGAGAACAA+AGG | - | chr7.4:3521618-3521637 | MS.gene78584:CDS | 35.0% | |
| AAATAGCAAAACAGTGGCAA+TGG | - | chr7.4:3523984-3524003 | MS.gene78584:CDS | 35.0% | |
| AAATGAAGATGATCTGTCTG+AGG | - | chr7.4:3523075-3523094 | MS.gene78584:intron | 35.0% | |
| AACGATTCATCGAGAACAAA+GGG | - | chr7.4:3521619-3521638 | MS.gene78584:CDS | 35.0% | |
| AATGAGGAAGAGCTAGAAAA+TGG | - | chr7.4:3523049-3523068 | MS.gene78584:CDS | 35.0% | |
| ACATGGGTAAATCAATTGCA+AGG | + | chr7.4:3521521-3521540 | None:intergenic | 35.0% | |
| ACTTGCAAAGGAATTCACAT+TGG | + | chr7.4:3521996-3522015 | None:intergenic | 35.0% | |
| ATTCCATTTGTCTGACAGAT+TGG | - | chr7.4:3521896-3521915 | MS.gene78584:CDS | 35.0% | |
| CATGGGTAAATCAATTGCAA+GGG | + | chr7.4:3521520-3521539 | None:intergenic | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.4:3523159-3523178 | MS.gene78584:intron | 35.0% | |
| CTGAAGAATTCTCAACAATC+CGG | + | chr7.4:3523729-3523748 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGGATGTTT+AGG | - | chr7.4:3523736-3523755 | MS.gene78584:intron | 35.0% | |
| GATGCAAACCAAAATGTTTG+TGG | - | chr7.4:3523784-3523803 | MS.gene78584:intron | 35.0% | |
| GATTCATTCTAAGCGAAATC+TGG | + | chr7.4:3521461-3521480 | None:intergenic | 35.0% | |
| GCAGTAAATGATAATTCGCT+CGG | + | chr7.4:3522398-3522417 | None:intergenic | 35.0% | |
| GCCTATATGACCATATTTAG+TGG | - | chr7.4:3521923-3521942 | MS.gene78584:CDS | 35.0% | |
| GTCTGAAAATAGCAAAACAG+TGG | - | chr7.4:3523978-3523997 | MS.gene78584:CDS | 35.0% | |
| TAAACTTCCTTCTCGAAATG+TGG | - | chr7.4:3522059-3522078 | MS.gene78584:CDS | 35.0% | |
| TAATTCGGTACCTAAAGTTG+AGG | - | chr7.4:3523231-3523250 | MS.gene78584:intron | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.4:3522923-3522942 | MS.gene78584:CDS | 35.0% | |
| TCTTTGAGCACGAGAATATT+CGG | + | chr7.4:3523001-3523020 | None:intergenic | 35.0% | |
| TGGAAAGTCATCTGCTTTAA+GGG | - | chr7.4:3523189-3523208 | MS.gene78584:intron | 35.0% | |
| TGTTACCTCCAATGATTATC+TGG | - | chr7.4:3522871-3522890 | MS.gene78584:CDS | 35.0% | |
| TTAACATCTTCTGAATCAGC+AGG | + | chr7.4:3521483-3521502 | None:intergenic | 35.0% | |
| TTACTGTAAGTAGAAGATCG+GGG | + | chr7.4:3523124-3523143 | None:intergenic | 35.0% | |
| TTCGAGAAGGAAGTTTAAGA+AGG | + | chr7.4:3522056-3522075 | None:intergenic | 35.0% | |
| TTGAAGTCTACTGTTGGATT+CGG | - | chr7.4:3522590-3522609 | MS.gene78584:CDS | 35.0% | |
| TTTCACCTTCAAAATACCTC+AGG | - | chr7.4:3523945-3523964 | MS.gene78584:CDS | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | - | chr7.4:3521682-3521701 | MS.gene78584:CDS | 35.0% |
| ! | AATTGGCTGTCCATATTTTG+CGG | - | chr7.4:3522152-3522171 | MS.gene78584:CDS | 35.0% |
| ! | ATAGGACATAACCTTTTTGC+CGG | - | chr7.4:3521741-3521760 | MS.gene78584:CDS | 35.0% |
| ! | ATGCTTAGATTGTTTCTCCT+AGG | - | chr7.4:3522264-3522283 | MS.gene78584:CDS | 35.0% |
| ! | CTGAAAGCTTCACTAGTTTA+TGG | - | chr7.4:3522304-3522323 | MS.gene78584:CDS | 35.0% |
| ! | GAAACAATCTAAGCATCGTT+CGG | + | chr7.4:3522260-3522279 | None:intergenic | 35.0% |
| ! | GAAGCATCTTCTAATTCAAC+TGG | + | chr7.4:3523403-3523422 | None:intergenic | 35.0% |
| ! | TAACTGGACCACAAACATTT+TGG | + | chr7.4:3523795-3523814 | None:intergenic | 35.0% |
| !! | ACTTTAGGTACCGAATTAAC+AGG | + | chr7.4:3523229-3523248 | None:intergenic | 35.0% |
| !!! | GACATGGATTTTTTGCCTTT+AGG | + | chr7.4:3524029-3524048 | None:intergenic | 35.0% |
| !!! | TTGAGGTAGATTTTGATTGC+AGG | - | chr7.4:3523248-3523267 | MS.gene78584:intron | 35.0% |
| !!! | TTGCTATTTTCAGACTTCGA+TGG | + | chr7.4:3523973-3523992 | None:intergenic | 35.0% |
| AAGCCAATCTGTCAGACAAA+TGG | + | chr7.4:3521902-3521921 | None:intergenic | 40.0% | |
| ATCTCAAAATGCTCTGTCAC+AGG | - | chr7.4:3521815-3521834 | MS.gene78584:CDS | 40.0% | |
| ATGAAAGGATCTTGTGTGTC+TGG | + | chr7.4:3524242-3524261 | None:intergenic | 40.0% | |
| ATGCAGCCGTTCCTATTAAA+AGG | - | chr7.4:3523668-3523687 | MS.gene78584:intron | 40.0% | |
| ATGTCTAACATCTGCTTCTC+AGG | - | chr7.4:3524044-3524063 | MS.gene78584:CDS | 40.0% | |
| ATTCATCGAGAACAAAGGGA+TGG | - | chr7.4:3521623-3521642 | MS.gene78584:CDS | 40.0% | |
| ATTCTCGTGCTCAAAGAAGA+AGG | - | chr7.4:3523004-3523023 | MS.gene78584:CDS | 40.0% | |
| ATTTACCCATGTCAGACACA+TGG | - | chr7.4:3521529-3521548 | MS.gene78584:CDS | 40.0% | |
| CCTTGAAAACTTCTCAACAC+CGG | + | chr7.4:3522909-3522928 | None:intergenic | 40.0% | |
| CGAAGTGCAGGAAGAAAAAA+GGG | - | chr7.4:3521706-3521725 | MS.gene78584:CDS | 40.0% | |
| CGGATTGTTGAGAATTCTTC+AGG | - | chr7.4:3523727-3523746 | MS.gene78584:intron | 40.0% | |
| CTATTCGAGGACTGAATTCA+GGG | + | chr7.4:3521392-3521411 | None:intergenic | 40.0% | |
| CTTGAAAACTTCTCAACACC+GGG | + | chr7.4:3522908-3522927 | None:intergenic | 40.0% | |
| GAATCCAACAGTAGACTTCA+AGG | + | chr7.4:3522591-3522610 | None:intergenic | 40.0% | |
| GACAATAGTTCATGTTGCCT+CGG | + | chr7.4:3521768-3521787 | None:intergenic | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.4:3522857-3522876 | None:intergenic | 40.0% | |
| GTGGAAAGTCATCTGCTTTA+AGG | - | chr7.4:3523188-3523207 | MS.gene78584:intron | 40.0% | |
| TCATTCTGCTGATGACTAAC+TGG | + | chr7.4:3523811-3523830 | None:intergenic | 40.0% | |
| TCGAAGTGCAGGAAGAAAAA+AGG | - | chr7.4:3521705-3521724 | MS.gene78584:CDS | 40.0% | |
| TCTGATTTCGCAATCACAGA+AGG | + | chr7.4:3521438-3521457 | None:intergenic | 40.0% | |
| TCTTCCTTGAAGTCTACTGT+TGG | - | chr7.4:3522584-3522603 | MS.gene78584:CDS | 40.0% | |
| TGAGAAGCAGATGTTAGACA+TGG | + | chr7.4:3524045-3524064 | None:intergenic | 40.0% | |
| TGAGATTCTTCAGAGACATG+AGG | + | chr7.4:3521801-3521820 | None:intergenic | 40.0% | |
| TTCATCGAGAACAAAGGGAT+GGG | - | chr7.4:3521624-3521643 | MS.gene78584:CDS | 40.0% | |
| ! | AATAAAACTGATGGGTGCAG+TGG | - | chr7.4:3523529-3523548 | MS.gene78584:intron | 40.0% |
| ! | AATCCGGCTTTTCTCTGATT+TGG | + | chr7.4:3523713-3523732 | None:intergenic | 40.0% |
| ! | AATTGATGATTCAGCGAGGA+AGG | - | chr7.4:3523468-3523487 | MS.gene78584:intron | 40.0% |
| ! | CAGGATGTTTAGGATTCTCT+CGG | - | chr7.4:3523746-3523765 | MS.gene78584:intron | 40.0% |
| ! | CTACAATTGATGATTCAGCG+AGG | - | chr7.4:3523464-3523483 | MS.gene78584:intron | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.4:3522713-3522732 | MS.gene78584:CDS | 40.0% |
| !! | ATTGATACCAGTTTGGTGCA+TGG | - | chr7.4:3523166-3523185 | MS.gene78584:intron | 40.0% |
| !! | GTAGGTATTGGTAAGGAGAA+GGG | - | chr7.4:3522629-3522648 | MS.gene78584:CDS | 40.0% |
| !! | TGGTACCTGAGGTATTTTGA+AGG | + | chr7.4:3523953-3523972 | None:intergenic | 40.0% |
| !! | TGTAGGTATTGGTAAGGAGA+AGG | - | chr7.4:3522628-3522647 | MS.gene78584:CDS | 40.0% |
| !!! | GGTAGATTTTGATTGCAGGA+AGG | - | chr7.4:3523252-3523271 | MS.gene78584:intron | 40.0% |
| AAAGCTTTGCAAGCTGGTGT+TGG | + | chr7.4:3522704-3522723 | None:intergenic | 45.0% | |
| AACAGCCTGATATGAATCCG+AGG | - | chr7.4:3524118-3524137 | MS.gene78584:CDS | 45.0% | |
| AATAGGTCATGCATACCAGG+CGG | - | chr7.4:3521407-3521426 | MS.gene78584:CDS | 45.0% | |
| ACATCGCAAGGGATTCTCAA+AGG | + | chr7.4:3524084-3524103 | None:intergenic | 45.0% | |
| ATCACTCCATGTGTCTGACA+TGG | + | chr7.4:3521538-3521557 | None:intergenic | 45.0% | |
| CAAAGATGAGCAAGGCCTAA+AGG | - | chr7.4:3524011-3524030 | MS.gene78584:CDS | 45.0% | |
| CAGCCGTTCCTATTAAAAGG+AGG | - | chr7.4:3523671-3523690 | MS.gene78584:intron | 45.0% | |
| CAGGAAGGTAAACCATAGCA+AGG | - | chr7.4:3523267-3523286 | MS.gene78584:intron | 45.0% | |
| CCAAAGAACCAACATCGCAA+GGG | + | chr7.4:3524095-3524114 | None:intergenic | 45.0% | |
| CCTATTCGAGGACTGAATTC+AGG | + | chr7.4:3521393-3521412 | None:intergenic | 45.0% | |
| CCTGAATTCAGTCCTCGAAT+AGG | - | chr7.4:3521390-3521409 | MS.gene78584:CDS | 45.0% | |
| CTCAATCGGAGAGTAAGATC+AGG | - | chr7.4:3523634-3523653 | MS.gene78584:intron | 45.0% | |
| CTCATTGCAGCTACCAACTT+TGG | + | chr7.4:3523035-3523054 | None:intergenic | 45.0% | |
| CTTGTGGAAGCTGTAGGTAT+TGG | - | chr7.4:3522617-3522636 | MS.gene78584:CDS | 45.0% | |
| CTTTAGGCCTTGCTCATCTT+TGG | + | chr7.4:3524013-3524032 | None:intergenic | 45.0% | |
| GAAGAAGGAGAAGCCAAAGT+TGG | - | chr7.4:3523019-3523038 | MS.gene78584:CDS | 45.0% | |
| GAAGACAAAGCTTTGCAAGC+TGG | + | chr7.4:3522710-3522729 | None:intergenic | 45.0% | |
| GATGCTTCTACGATGACTAC+TGG | - | chr7.4:3523415-3523434 | MS.gene78584:intron | 45.0% | |
| GGTCTTCCGAGAGAAAGTAA+GGG | - | chr7.4:3523436-3523455 | MS.gene78584:intron | 45.0% | |
| GTGCCAAATCAGAGAAAAGC+CGG | - | chr7.4:3523707-3523726 | MS.gene78584:intron | 45.0% | |
| TCACTCCATGTGTCTGACAT+GGG | + | chr7.4:3521537-3521556 | None:intergenic | 45.0% | |
| TCATCGAGAACAAAGGGATG+GGG | - | chr7.4:3521625-3521644 | MS.gene78584:CDS | 45.0% | |
| TCCAAAGAACCAACATCGCA+AGG | + | chr7.4:3524096-3524115 | None:intergenic | 45.0% | |
| TCCTTTCATTCCTTGCTGCA+AGG | - | chr7.4:3524253-3524272 | MS.gene78584:CDS | 45.0% | |
| TCGAATAGGTCATGCATACC+AGG | - | chr7.4:3521404-3521423 | MS.gene78584:CDS | 45.0% | |
| TGCAGTGGTGTATCTAACAG+TGG | - | chr7.4:3523544-3523563 | MS.gene78584:intron | 45.0% | |
| TGGTATGCATGACCTATTCG+AGG | + | chr7.4:3521405-3521424 | None:intergenic | 45.0% | |
| TGGTCTTCCGAGAGAAAGTA+AGG | - | chr7.4:3523435-3523454 | MS.gene78584:intron | 45.0% | |
| TGTCTCCTCGGATTCATATC+AGG | + | chr7.4:3524126-3524145 | None:intergenic | 45.0% | |
| TTCTTCAGCAGACAGAAGTG+TGG | - | chr7.4:3523840-3523859 | MS.gene78584:CDS | 45.0% | |
| TTGAGAATCCCTTGCGATGT+TGG | - | chr7.4:3524084-3524103 | MS.gene78584:CDS | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.4:3522795-3522814 | MS.gene78584:CDS | 45.0% |
| ! | TTTTAGGCGCATCCTTGCTA+TGG | + | chr7.4:3523282-3523301 | None:intergenic | 45.0% |
| !! | CAAAGTTGGTAGCTGCAATG+AGG | - | chr7.4:3523033-3523052 | MS.gene78584:CDS | 45.0% |
| !! | CCGGTGTTGAGAAGTTTTCA+AGG | - | chr7.4:3522906-3522925 | MS.gene78584:CDS | 45.0% |
| !! | GGAAGCTGTAGGTATTGGTA+AGG | - | chr7.4:3522622-3522641 | MS.gene78584:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.4:3522845-3522864 | MS.gene78584:CDS | 45.0% |
| !! | TTTCTAGAGCTCTGTCTCCT+CGG | + | chr7.4:3524138-3524157 | None:intergenic | 45.0% |
| AAGTAGAAGATCGGGGCTTG+AGG | + | chr7.4:3523117-3523136 | None:intergenic | 50.0% | |
| ATCGGGGCTTGAGGTAACAT+TGG | + | chr7.4:3523108-3523127 | None:intergenic | 50.0% | |
| ATCGTAGATGGTCGAAGTGC+AGG | - | chr7.4:3521694-3521713 | MS.gene78584:CDS | 50.0% | |
| ATGGCAGCCAAAGATGAGCA+AGG | - | chr7.4:3524003-3524022 | MS.gene78584:CDS | 50.0% | |
| CTTCCGAGAGAAAGTAAGGG+TGG | - | chr7.4:3523439-3523458 | MS.gene78584:intron | 50.0% | |
| CTTTCCACCATGCACCAAAC+TGG | + | chr7.4:3523176-3523195 | None:intergenic | 50.0% | |
| GAGCCACCCTTACTTTCTCT+CGG | + | chr7.4:3523445-3523464 | None:intergenic | 50.0% | |
| GCCTTGCAGCAAGGAATGAA+AGG | + | chr7.4:3524257-3524276 | None:intergenic | 50.0% | |
| TAGTTCATGTTGCCTCGGTC+CGG | + | chr7.4:3521763-3521782 | None:intergenic | 50.0% | |
| TCACAGAAGGAATTTCCGCC+TGG | + | chr7.4:3521425-3521444 | None:intergenic | 50.0% | |
| TCAGACTTCGATGGTACCTG+AGG | + | chr7.4:3523964-3523983 | None:intergenic | 50.0% | |
| TCTGTCTCTTTGGCACATGC+AGG | + | chr7.4:3524206-3524225 | None:intergenic | 50.0% | |
| TGATGATTCAGCGAGGAAGG+TGG | - | chr7.4:3523471-3523490 | MS.gene78584:intron | 50.0% | |
| TGTTGGATTCGGCGTACTTG+TGG | - | chr7.4:3522601-3522620 | MS.gene78584:CDS | 50.0% | |
| TTCATGGACCTTGCGTCTGA+TGG | - | chr7.4:3521363-3521382 | MS.gene78584:CDS | 50.0% | |
| ! | AGAAGTGTGGCAGAGGATGA+TGG | - | chr7.4:3523853-3523872 | MS.gene78584:CDS | 50.0% |
| ! | ATAACCTTTTTGCCGGACCG+AGG | - | chr7.4:3521748-3521767 | MS.gene78584:CDS | 50.0% |
| !! | CCCTTGCGATGTTGGTTCTT+TGG | - | chr7.4:3524092-3524111 | MS.gene78584:CDS | 50.0% |
| !! | GATACCAGTTTGGTGCATGG+TGG | - | chr7.4:3523169-3523188 | MS.gene78584:intron | 50.0% |
| AACGCTTGAACGTCCTTCCC+AGG | + | chr7.4:3522680-3522699 | None:intergenic | 55.0% | |
| AAGGGAGACCTTACCAGGCT+TGG | - | chr7.4:3522647-3522666 | MS.gene78584:CDS | 55.0% | |
| AGACCTTACCAGGCTTGGCA+TGG | - | chr7.4:3522652-3522671 | MS.gene78584:CDS | 55.0% | |
| AGGAGAAGGGAGACCTTACC+AGG | - | chr7.4:3522642-3522661 | MS.gene78584:CDS | 55.0% | |
| CAACCTCTTGCCAGTAAGCG+GGG | + | chr7.4:3522821-3522840 | None:intergenic | 55.0% | |
| CATGTACGAGCCTTGCAGCA+AGG | + | chr7.4:3524266-3524285 | None:intergenic | 55.0% | |
| CCAACCTCTTGCCAGTAAGC+GGG | + | chr7.4:3522822-3522841 | None:intergenic | 55.0% | |
| CGAGGAAGGTGGAAGCTAAG+AGG | - | chr7.4:3523482-3523501 | MS.gene78584:intron | 55.0% | |
| GAAGGTGGAAGCTAAGAGGC+TGG | - | chr7.4:3523486-3523505 | MS.gene78584:intron | 55.0% | |
| GCCAACCTCTTGCCAGTAAG+CGG | + | chr7.4:3522823-3522842 | None:intergenic | 55.0% | |
| GGCGTACTTGTGGAAGCTGT+AGG | - | chr7.4:3522611-3522630 | MS.gene78584:CDS | 55.0% | |
| GTTCCATGCCAAGCCTGGTA+AGG | + | chr7.4:3522658-3522677 | None:intergenic | 55.0% | |
| TGCTGCAAGGCTCGTACATG+AGG | - | chr7.4:3524266-3524285 | MS.gene78584:CDS | 55.0% | |
| ! | AGCAGACAGAAGTGTGGCAG+AGG | - | chr7.4:3523846-3523865 | MS.gene78584:CDS | 55.0% |
| ACCAGGCTTGGCATGGAACC+TGG | - | chr7.4:3522659-3522678 | MS.gene78584:CDS | 60.0% | |
| AGCTGTTTGGCCCCGCTTAC+TGG | - | chr7.4:3522808-3522827 | MS.gene78584:CDS | 60.0% | |
| CAGGGTCTCCATCAGACGCA+AGG | + | chr7.4:3521374-3521393 | None:intergenic | 60.0% | |
| CCAGGCTTGGCATGGAACCT+GGG | - | chr7.4:3522660-3522679 | MS.gene78584:CDS | 60.0% | |
| CCCGCTTACTGGCAAGAGGT+TGG | - | chr7.4:3522819-3522838 | MS.gene78584:CDS | 60.0% | |
| GCTTGGCATGGAACCTGGGA+AGG | - | chr7.4:3522664-3522683 | MS.gene78584:CDS | 60.0% | |
| GTTGCCTCGGTCCGGCAAAA+AGG | + | chr7.4:3521755-3521774 | None:intergenic | 60.0% | |
| CCCAGGTTCCATGCCAAGCC+TGG | + | chr7.4:3522663-3522682 | None:intergenic | 65.0% | |
| TGGCCCCGCTTACTGGCAAG+AGG | - | chr7.4:3522815-3522834 | MS.gene78584:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3521330 | 3524296 | 3521330 | ID=MS.gene78584 |
| chr7.4 | mRNA | 3521330 | 3524296 | 3521330 | ID=MS.gene78584.t1;Parent=MS.gene78584 |
| chr7.4 | exon | 3523790 | 3524296 | 3523790 | ID=MS.gene78584.t1.exon1;Parent=MS.gene78584.t1 |
| chr7.4 | CDS | 3523790 | 3524296 | 3523790 | ID=cds.MS.gene78584.t1;Parent=MS.gene78584.t1 |
| chr7.4 | exon | 3521330 | 3523090 | 3521330 | ID=MS.gene78584.t1.exon2;Parent=MS.gene78584.t1 |
| chr7.4 | CDS | 3521330 | 3523090 | 3521330 | ID=cds.MS.gene78584.t1;Parent=MS.gene78584.t1 |
| Gene Sequence |
| Protein sequence |
