Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053360.t1 | XP_013467079.1 | 84.9 | 843 | 119 | 3 | 1 | 839 | 1 | 839 | 0.00E+00 | 1376.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053360.t1 | A0A072VGE3 | 84.9 | 843 | 119 | 3 | 1 | 839 | 1 | 839 | 0.0e+00 | 1376.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050953 | MS.gene053360 | 0.800148 | 1.65E-48 | -1.69E-46 |
| MS.gene053360 | MS.gene063225 | 0.837077 | 6.43E-57 | -1.69E-46 |
| MS.gene053360 | MS.gene063859 | 0.805541 | 1.27E-49 | -1.69E-46 |
| MS.gene053360 | MS.gene073008 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene053360 | MS.gene65461 | 0.859486 | 4.00E-63 | -1.69E-46 |
| MS.gene053360 | MS.gene67159 | 0.908672 | 1.32E-81 | -1.69E-46 |
| MS.gene053360 | MS.gene73820 | 0.819253 | 1.28E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene053360 | MS.gene072485 | PPI |
| MS.gene67159 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene050889 | PPI |
| MS.gene053360 | MS.gene78584 | PPI |
| MS.gene053360 | MS.gene78586 | PPI |
| MS.gene053360 | MS.gene78585 | PPI |
| MS.gene072481 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene050892 | PPI |
| MS.gene053360 | MS.gene050942 | PPI |
| MS.gene050738 | MS.gene053360 | PPI |
| MS.gene063225 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene072482 | PPI |
| MS.gene053360 | MS.gene072542 | PPI |
| MS.gene053360 | MS.gene29350 | PPI |
| MS.gene65461 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene050891 | PPI |
| MS.gene78587 | MS.gene053360 | PPI |
| MS.gene050893 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene78588 | PPI |
| MS.gene29351 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene054416 | PPI |
| MS.gene053360 | MS.gene072483 | PPI |
| MS.gene053360 | MS.gene29351 | PPI |
| MS.gene053360 | MS.gene050890 | PPI |
| MS.gene78585 | MS.gene053360 | PPI |
| MS.gene053360 | MS.gene29352 | PPI |
| MS.gene053360 | MS.gene072484 | PPI |
| MS.gene054416 | MS.gene053360 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053360.t1 | MTR_1g041895 | 90.036 | 843 | 76 | 3 | 1 | 839 | 1 | 839 | 0.0 | 1518 |
| MS.gene053360.t1 | MTR_7g113270 | 69.240 | 816 | 183 | 12 | 1 | 807 | 1 | 757 | 0.0 | 1017 |
| MS.gene053360.t1 | MTR_7g113280 | 66.959 | 799 | 209 | 7 | 1 | 791 | 1 | 752 | 0.0 | 1003 |
| MS.gene053360.t1 | MTR_7g113220 | 68.382 | 816 | 186 | 12 | 1 | 807 | 1 | 753 | 0.0 | 1001 |
| MS.gene053360.t1 | MTR_7g113250 | 73.043 | 460 | 95 | 3 | 13 | 470 | 1 | 433 | 0.0 | 659 |
| MS.gene053360.t1 | MTR_7g113250 | 62.814 | 199 | 65 | 3 | 634 | 826 | 436 | 631 | 2.88e-64 | 228 |
| MS.gene053360.t1 | MTR_7g112390 | 69.824 | 454 | 61 | 4 | 131 | 581 | 1 | 381 | 0.0 | 576 |
| MS.gene053360.t1 | MTR_7g112390 | 69.962 | 263 | 37 | 4 | 581 | 837 | 478 | 704 | 1.68e-98 | 322 |
| MS.gene053360.t1 | MTR_7g108470 | 44.690 | 452 | 199 | 8 | 22 | 426 | 28 | 475 | 1.31e-113 | 369 |
| MS.gene053360.t1 | MTR_4g119630 | 45.777 | 367 | 174 | 6 | 22 | 372 | 40 | 397 | 7.00e-96 | 308 |
| MS.gene053360.t1 | MTR_3g049350 | 66.972 | 218 | 54 | 2 | 304 | 519 | 3 | 204 | 2.20e-83 | 268 |
| MS.gene053360.t1 | MTR_3g049350 | 58.667 | 75 | 30 | 1 | 634 | 708 | 174 | 247 | 3.50e-18 | 85.9 |
| MS.gene053360.t1 | MTR_2g436970 | 38.066 | 331 | 165 | 9 | 26 | 355 | 17 | 308 | 9.21e-63 | 218 |
| MS.gene053360.t1 | MTR_7g113290 | 73.504 | 117 | 30 | 1 | 568 | 684 | 10 | 125 | 1.25e-42 | 158 |
| MS.gene053360.t1 | MTR_4g119640 | 30.952 | 126 | 56 | 4 | 31 | 144 | 27 | 133 | 3.12e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053360.t1 | AT1G09040 | 44.072 | 447 | 198 | 7 | 23 | 424 | 35 | 474 | 1.86e-109 | 357 |
| MS.gene053360.t1 | AT1G09050 | 43.624 | 447 | 200 | 7 | 23 | 424 | 35 | 474 | 2.52e-106 | 348 |
| MS.gene053360.t1 | AT1G09050 | 43.624 | 447 | 200 | 7 | 23 | 424 | 35 | 474 | 2.52e-106 | 348 |
| MS.gene053360.t1 | AT2G47820 | 41.113 | 467 | 217 | 10 | 18 | 433 | 30 | 489 | 2.68e-102 | 335 |
| MS.gene053360.t1 | AT2G47820 | 41.113 | 467 | 217 | 10 | 18 | 433 | 30 | 489 | 2.68e-102 | 335 |
| MS.gene053360.t1 | AT1G55050 | 43.049 | 446 | 200 | 9 | 26 | 433 | 27 | 456 | 4.84e-96 | 321 |
| MS.gene053360.t1 | AT1G55050 | 43.049 | 446 | 200 | 9 | 26 | 433 | 27 | 456 | 4.84e-96 | 321 |
Find 177 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCATTTGATCCCCTTTC+TGG | 0.062724 | 1.4:+26765775 | None:intergenic |
| TGAGGAGCCTGTTGGTTATT+TGG | 0.173412 | 1.4:-26764663 | MS.gene053360:CDS |
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 1.4:-26765959 | MS.gene053360:CDS |
| CGATTCTGCTGATGACTAAT+TGG | 0.221295 | 1.4:+26764935 | None:intergenic |
| ATACAGTTGTTCCTATTAAA+AGG | 0.233999 | 1.4:-26765090 | MS.gene053360:CDS |
| ACGTTGTTGCATTCTGTTTA+GGG | 0.255308 | 1.4:+26765506 | None:intergenic |
| CGCATTGTTGAGAATTCTTC+AGG | 0.256639 | 1.4:-26765031 | MS.gene053360:CDS |
| CCAAATGTAACGATCTCTTC+TGG | 0.272360 | 1.4:-26766047 | MS.gene053360:CDS |
| TCCTCGAGCACGAGAATATT+CGG | 0.276731 | 1.4:+26765832 | None:intergenic |
| AGCTGTTTGGCCCCGCTTAC+TGG | 0.290051 | 1.4:-26766022 | MS.gene053360:CDS |
| GTAACATAGCCTCGATTCTT+TGG | 0.306244 | 1.4:+26765976 | None:intergenic |
| ATCGCAAGATACTTTGTTAC+AGG | 0.312695 | 1.4:-26766523 | MS.gene053360:intron |
| TGATGCTTTATGATCCTCTT+TGG | 0.320294 | 1.4:+26765148 | None:intergenic |
| TAAAGATTGTATAAAGTTCA+TGG | 0.326893 | 1.4:-26765695 | MS.gene053360:CDS |
| TTTCTAGTGCTTTGTCTCCT+AGG | 0.328216 | 1.4:+26764614 | None:intergenic |
| AACGTTGTTGCATTCTGTTT+AGG | 0.332484 | 1.4:+26765505 | None:intergenic |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 1.4:-26765648 | MS.gene053360:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.348937 | 1.4:-26766035 | MS.gene053360:CDS |
| ACTTTACTCACTGAATTAAC+AGG | 0.353037 | 1.4:+26765610 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.354435 | 1.4:-26766120 | MS.gene053360:CDS |
| CTTCTTTGAAGTCTATTGTT+GGG | 0.354909 | 1.4:-26766251 | MS.gene053360:CDS |
| TGGTACTCATGACCTATTCT+AGG | 0.355398 | 1.4:+26767014 | None:intergenic |
| AATCTTTGACTGGAGGGTTT+CGG | 0.356679 | 1.4:-26766080 | MS.gene053360:CDS |
| CCACAACGACTACTGGTCTT+TGG | 0.359141 | 1.4:-26765387 | MS.gene053360:CDS |
| TCCTTCCATGCTTAAGAAAT+CGG | 0.361152 | 1.4:-26766982 | MS.gene053360:CDS |
| CTAATTGGATCACAAACAAT+TGG | 0.362277 | 1.4:+26764950 | None:intergenic |
| CCTTCTTTGAAGTCTATTGT+TGG | 0.362479 | 1.4:-26766252 | MS.gene053360:CDS |
| CTTTATACAATCTTTATTGT+AGG | 0.364885 | 1.4:+26765702 | None:intergenic |
| TTGAAGTCTATTGTTGGGCT+TGG | 0.375908 | 1.4:-26766246 | MS.gene053360:CDS |
| AAATCACTTTCCTTTGCAAT+TGG | 0.379600 | 1.4:-26766909 | MS.gene053360:CDS |
| TGAAAGGATCTTTGTGTGTC+TGG | 0.380371 | 1.4:+26764510 | None:intergenic |
| CCAGAAGAGATCGTTACATT+TGG | 0.393588 | 1.4:+26766047 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.395919 | 1.4:-26765677 | MS.gene053360:CDS |
| CACAGGCGTGTTGATTTCTC+TGG | 0.401071 | 1.4:+26765188 | None:intergenic |
| AACTTATGATTCACCAAAGA+TGG | 0.407799 | 1.4:-26765341 | MS.gene053360:CDS |
| TTTCATCATCCTCCTCTGCC+AGG | 0.413666 | 1.4:+26764882 | None:intergenic |
| CATCATCATTGTTCAGATCA+TGG | 0.417596 | 1.4:-26764446 | MS.gene053360:CDS |
| TGGCAATGGCGGAGGAAGGC+GGG | 0.427130 | 1.4:-26764739 | MS.gene053360:CDS |
| TGGTCTTTGGAGAGAAAGTA+AGG | 0.431040 | 1.4:-26765374 | MS.gene053360:CDS |
| TTTATTGTAGGAAGAAGATC+GGG | 0.433582 | 1.4:+26765714 | None:intergenic |
| AGACATCAATTCATGTCAAT+TGG | 0.437759 | 1.4:-26766835 | MS.gene053360:CDS |
| TGCCGAATTGCTCGAACAAA+AGG | 0.439726 | 1.4:-26764482 | MS.gene053360:CDS |
| CAAATGTAACGATCTCTTCT+GGG | 0.441362 | 1.4:-26766046 | MS.gene053360:CDS |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 1.4:-26766219 | MS.gene053360:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 1.4:+26765640 | None:intergenic |
| AAGGGAGGGAAACGTATGAT+AGG | 0.460668 | 1.4:-26766615 | MS.gene053360:CDS |
| TTCTGACGGAAAAGTATTGA+AGG | 0.461870 | 1.4:-26765458 | MS.gene053360:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 1.4:+26765663 | None:intergenic |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 1.4:-26766858 | MS.gene053360:CDS |
| CCAACCTCTTGCCAGTAAGC+GGG | 0.472085 | 1.4:+26766011 | None:intergenic |
| CTGGCCGATTGAGTAGCTCC+TGG | 0.472390 | 1.4:-26766809 | MS.gene053360:CDS |
| TTTCAGTTTCAACATGCCTC+AGG | 0.472552 | 1.4:-26764792 | MS.gene053360:CDS |
| GGAGCATCTTCTAATTCAAC+TGG | 0.473411 | 1.4:+26765409 | None:intergenic |
| GCCAACCTCTTGCCAGTAAG+CGG | 0.473500 | 1.4:+26766010 | None:intergenic |
| TGTCTCCTAGGATTTATGTC+AGG | 0.477106 | 1.4:+26764626 | None:intergenic |
| ATGGCAATGGCGGAGGAAGG+CGG | 0.478889 | 1.4:-26764740 | MS.gene053360:CDS |
| CTTGATTTGAGTCCTAGAAT+AGG | 0.483633 | 1.4:-26767026 | MS.gene053360:CDS |
| CAGGAGCTACTCAATCGGCC+AGG | 0.486259 | 1.4:+26766810 | None:intergenic |
| TCATTATGTATCCATGTGAC+TGG | 0.486359 | 1.4:+26766876 | None:intergenic |
| GAAGACAAAGCTTTGCAAGT+TGG | 0.488718 | 1.4:+26766126 | None:intergenic |
| CTCGAAAACTTCTCAACACC+GGG | 0.489787 | 1.4:+26765925 | None:intergenic |
| TAATTGGATCACAAACAATT+GGG | 0.490571 | 1.4:+26764951 | None:intergenic |
| TTCTGAAAATAGCAAAATGA+TGG | 0.492251 | 1.4:-26764759 | MS.gene053360:CDS |
| TCATAAAGCATCAGTTCAAT+CGG | 0.495370 | 1.4:-26765138 | MS.gene053360:CDS |
| GATGCTCCCACAACGACTAC+TGG | 0.495943 | 1.4:-26765394 | MS.gene053360:CDS |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 1.4:-26765670 | MS.gene053360:CDS |
| CTTTATTGTAGGAAGAAGAT+CGG | 0.498545 | 1.4:+26765713 | None:intergenic |
| GCTCGACACCAAGCCTAGTA+AGG | 0.499492 | 1.4:+26766181 | None:intergenic |
| ATCGTAGATGGTCAGAGTGC+AGG | 0.501650 | 1.4:-26766644 | MS.gene053360:CDS |
| TCAGGTTTCTAAGTTATATG+TGG | 0.501661 | 1.4:-26766304 | MS.gene053360:intron |
| TCTTAGATAACAAGCGGATG+GGG | 0.502626 | 1.4:-26766713 | MS.gene053360:CDS |
| TGTTGGGCTTGGTGTTCTTG+TGG | 0.505949 | 1.4:-26766235 | MS.gene053360:CDS |
| GGAAGGCGGGCAACACCTAA+AGG | 0.506307 | 1.4:-26764726 | MS.gene053360:CDS |
| AAACAGATGGATATCGTAGA+TGG | 0.508693 | 1.4:-26766656 | MS.gene053360:CDS |
| CCCGCTTACTGGCAAGAGGT+TGG | 0.511676 | 1.4:-26766011 | MS.gene053360:CDS |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.513384 | 1.4:-26766225 | MS.gene053360:CDS |
| AGGAGAAGAGAGACCTTACT+AGG | 0.516287 | 1.4:-26766194 | MS.gene053360:CDS |
| GACAAAAGTTCATGTTGCCT+CGG | 0.517703 | 1.4:+26766573 | None:intergenic |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 1.4:-26764588 | MS.gene053360:CDS |
| TAATGAGGAAGGGCCAGAAA+GGG | 0.523242 | 1.4:-26765788 | MS.gene053360:CDS |
| AGGAGCTACTCAATCGGCCA+GGG | 0.523652 | 1.4:+26766811 | None:intergenic |
| CTGCTCCGATTTCTTAAGCA+TGG | 0.523825 | 1.4:+26766977 | None:intergenic |
| TGGATCACAAACAATTGGGT+TGG | 0.524562 | 1.4:+26764955 | None:intergenic |
| ATCATCATTGTTCAGATCAT+GGG | 0.526314 | 1.4:-26764445 | MS.gene053360:CDS |
| AAGAGAGACCTTACTAGGCT+TGG | 0.528520 | 1.4:-26766189 | MS.gene053360:CDS |
| TTCTTAGATAACAAGCGGAT+GGG | 0.531523 | 1.4:-26766714 | MS.gene053360:CDS |
| GCATGGAAGGAATTTCTGCT+TGG | 0.531922 | 1.4:+26766994 | None:intergenic |
| GAGAATTCTTCAGGAGGTGT+GGG | 0.536899 | 1.4:-26765022 | MS.gene053360:CDS |
| CAAAGACCAGTAGTCGTTGT+GGG | 0.539657 | 1.4:+26765388 | None:intergenic |
| TGAGAATTCTTCAGGAGGTG+TGG | 0.539949 | 1.4:-26765023 | MS.gene053360:CDS |
| GTTGGTAACTGTAATGAGGA+AGG | 0.540015 | 1.4:-26765799 | MS.gene053360:CDS |
| GATATAATACAATCTTTGAC+TGG | 0.540698 | 1.4:-26766090 | MS.gene053360:CDS |
| CAAAATGATGGCAATGGCGG+AGG | 0.541360 | 1.4:-26764747 | MS.gene053360:CDS |
| CTCGAGGAAGAAGCTAAAGT+TGG | 0.542576 | 1.4:-26765817 | MS.gene053360:CDS |
| TCCGATTTCTTAAGCATGGA+AGG | 0.544650 | 1.4:+26766981 | None:intergenic |
| CTATTCTAGGACTCAAATCA+AGG | 0.544855 | 1.4:+26767027 | None:intergenic |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.548825 | 1.4:-26764681 | MS.gene053360:CDS |
| GCCTTACGACTGTTCTTCAC+AGG | 0.550268 | 1.4:+26766159 | None:intergenic |
| TTCTTCAGCAGACAGAATCC+TGG | 0.551369 | 1.4:-26764900 | MS.gene053360:CDS |
| CGATAATGATGCAAACAAGA+TGG | 0.552574 | 1.4:-26765218 | MS.gene053360:CDS |
| CTCAGCCTGACATAAATCCT+AGG | 0.553700 | 1.4:-26764631 | MS.gene053360:CDS |
| CTAGGATTTATGTCAGGCTG+AGG | 0.553918 | 1.4:+26764632 | None:intergenic |
| CAGTCCAGGAGCTACTCAAT+CGG | 0.558016 | 1.4:+26766805 | None:intergenic |
| TAATACAATCTTTGACTGGA+GGG | 0.558243 | 1.4:-26766086 | MS.gene053360:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 1.4:-26765647 | MS.gene053360:CDS |
| TGCACAGATTCTGAATCACC+AGG | 0.558519 | 1.4:+26766936 | None:intergenic |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 1.4:-26766214 | MS.gene053360:CDS |
| TTGGCAGATGTTGTCCGTTG+AGG | 0.560883 | 1.4:-26767093 | None:intergenic |
| GCAATTCGGCAAGGATTGAA+AGG | 0.561447 | 1.4:+26764494 | None:intergenic |
| CCAACAATAGACTTCAAAGA+AGG | 0.561675 | 1.4:+26766252 | None:intergenic |
| TGGCCCCGCTTACTGGCAAG+AGG | 0.562669 | 1.4:-26766015 | MS.gene053360:CDS |
| CTTTCACTTAGCAAGAATCC+TGG | 0.562726 | 1.4:-26766954 | MS.gene053360:CDS |
| AATTCATGTCAATTGGCCCC+TGG | 0.568515 | 1.4:-26766828 | MS.gene053360:CDS |
| TAAAGTTGGTAACTGTAATG+AGG | 0.572386 | 1.4:-26765803 | MS.gene053360:CDS |
| GTAATGAGGAAGGGCCAGAA+AGG | 0.573026 | 1.4:-26765789 | MS.gene053360:CDS |
| ACCGAATATTCTCGTGCTCG+AGG | 0.573234 | 1.4:-26765833 | MS.gene053360:CDS |
| GGTTTCTAAGTTATATGTGG+AGG | 0.574143 | 1.4:-26766301 | MS.gene053360:CDS |
| AGACAGAATCCTGGCAGAGG+AGG | 0.578378 | 1.4:-26764891 | MS.gene053360:CDS |
| ATGTCTAACAGATGCCACTC+AGG | 0.578658 | 1.4:-26764693 | MS.gene053360:CDS |
| ATAATACAATCTTTGACTGG+AGG | 0.578879 | 1.4:-26766087 | MS.gene053360:CDS |
| ATTCTTAGATAACAAGCGGA+TGG | 0.579016 | 1.4:-26766715 | MS.gene053360:CDS |
| AAAGTTGATGTAGATGCTGC+TGG | 0.579391 | 1.4:-26765592 | MS.gene053360:CDS |
| ATCATTATCATTCTCCTCAA+CGG | 0.580480 | 1.4:+26767079 | None:intergenic |
| TTCAATCGGAGAGTAAGATC+AGG | 0.580927 | 1.4:-26765124 | MS.gene053360:CDS |
| AGCAGACAGAATCCTGGCAG+AGG | 0.583112 | 1.4:-26764894 | MS.gene053360:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 1.4:+26764587 | None:intergenic |
| AAATAGCAAAATGATGGCAA+TGG | 0.584646 | 1.4:-26764753 | MS.gene053360:CDS |
| GCCTGTGAAGAACAGTCGTA+AGG | 0.584704 | 1.4:-26766160 | MS.gene053360:CDS |
| GTTTCTAAGTTATATGTGGA+GGG | 0.586089 | 1.4:-26766300 | MS.gene053360:CDS |
| TCGAGGAGGAAACTTGTGAA+AGG | 0.586321 | 1.4:-26765907 | MS.gene053360:CDS |
| ATGATGGCAATGGCGGAGGA+AGG | 0.586995 | 1.4:-26764743 | MS.gene053360:CDS |
| AAAGATTCTTAGATAACAAG+CGG | 0.587242 | 1.4:-26766719 | MS.gene053360:CDS |
| TGTATCCATGTGACTGGGAT+GGG | 0.589361 | 1.4:+26766882 | None:intergenic |
| CCTCGAAAACTTCTCAACAC+CGG | 0.591475 | 1.4:+26765924 | None:intergenic |
| AGGAAGAAGATCGGGGCTTG+AGG | 0.593579 | 1.4:+26765722 | None:intergenic |
| GATACCAATCGACTTTCTGA+CGG | 0.594515 | 1.4:-26765472 | MS.gene053360:CDS |
| GGTGTGGGATCAGATAATCT+AGG | 0.597545 | 1.4:-26765007 | MS.gene053360:CDS |
| GAGATTGACTGCTTGTGCCA+AGG | 0.597834 | 1.4:-26765065 | MS.gene053360:CDS |
| GTTTACCCATCCCAGTCACA+TGG | 0.598464 | 1.4:-26766887 | MS.gene053360:CDS |
| CAACCTCTTGCCAGTAAGCG+GGG | 0.601857 | 1.4:+26766012 | None:intergenic |
| CCAAAGACCAGTAGTCGTTG+TGG | 0.603402 | 1.4:+26765387 | None:intergenic |
| TTGGTAACTGTAATGAGGAA+GGG | 0.605284 | 1.4:-26765798 | MS.gene053360:CDS |
| GAAGTAGTTGAGGAGCCTGT+TGG | 0.610422 | 1.4:-26764671 | MS.gene053360:CDS |
| AGATACACCTCTGTGACTGT+CGG | 0.611254 | 1.4:+26765273 | None:intergenic |
| TTTGTTCGAGCAATTCGGCA+AGG | 0.616285 | 1.4:+26764485 | None:intergenic |
| CTTAGATAACAAGCGGATGG+GGG | 0.617763 | 1.4:-26766712 | MS.gene053360:CDS |
| TAGCAAAATGATGGCAATGG+CGG | 0.620029 | 1.4:-26764750 | MS.gene053360:CDS |
| GAACCTAAAATGCTGATATG+TGG | 0.622268 | 1.4:-26765316 | MS.gene053360:CDS |
| CATTATGTATCCATGTGACT+GGG | 0.626289 | 1.4:+26766877 | None:intergenic |
| ATGTATCCATGTGACTGGGA+TGG | 0.628628 | 1.4:+26766881 | None:intergenic |
| TTATGATTCACCAAAGATGG+TGG | 0.628762 | 1.4:-26765338 | MS.gene053360:CDS |
| ATAAAGGGCGAAAATATACA+AGG | 0.632332 | 1.4:-26765561 | MS.gene053360:CDS |
| GCAACTCGAAAGCTAGAAGA+CGG | 0.633733 | 1.4:+26764977 | None:intergenic |
| AATGAGGAAGGGCCAGAAAG+GGG | 0.635015 | 1.4:-26765787 | MS.gene053360:CDS |
| TGGATACATAATGAAGAGTG+TGG | 0.635233 | 1.4:-26766867 | MS.gene053360:CDS |
| GGAGCTACTCAATCGGCCAG+GGG | 0.637073 | 1.4:+26766812 | None:intergenic |
| TCAGAATTCGACAGAACCTG+AGG | 0.637300 | 1.4:+26764776 | None:intergenic |
| GATGGGTAAACCAATTGCAA+AGG | 0.641739 | 1.4:+26766899 | None:intergenic |
| CAGTTGTTCCTATTAAAAGG+AGG | 0.643452 | 1.4:-26765087 | MS.gene053360:CDS |
| AAGGAAAGTAAACCATAGCA+CGG | 0.647183 | 1.4:-26765542 | MS.gene053360:CDS |
| TGAGTGGCATCTGTTAGACA+TGG | 0.649335 | 1.4:+26764695 | None:intergenic |
| ATTGTTGAGAATTCTTCAGG+AGG | 0.651016 | 1.4:-26765028 | MS.gene053360:CDS |
| GGTCTTTGGAGAGAAAGTAA+GGG | 0.652973 | 1.4:-26765373 | MS.gene053360:CDS |
| CTTTGGAGAGAAAGTAAGGG+TGG | 0.662141 | 1.4:-26765370 | MS.gene053360:CDS |
| CAGACACATGAGTAATCAAG+CGG | 0.664347 | 1.4:+26766550 | None:intergenic |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 1.4:+26764679 | None:intergenic |
| TCGATTATCATCGAACACAC+AGG | 0.680583 | 1.4:+26765171 | None:intergenic |
| GCATCTTCTAATTCAACTGG+CGG | 0.683679 | 1.4:+26765412 | None:intergenic |
| AGACACATGAGTAATCAAGC+GGG | 0.690477 | 1.4:+26766551 | None:intergenic |
| ATGGAGCACGTGTCTCACGA+AGG | 0.691068 | 1.4:-26767050 | MS.gene053360:CDS |
| TCTGAGCAACCAAAGAATCG+AGG | 0.695442 | 1.4:-26765985 | MS.gene053360:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 1.4:-26765667 | MS.gene053360:CDS |
| TTATTGTAGGAAGAAGATCG+GGG | 0.708515 | 1.4:+26765715 | None:intergenic |
| CACAGAGGTGTATCTAACAG+CGG | 0.712811 | 1.4:-26765265 | MS.gene053360:CDS |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 1.4:+26765032 | None:intergenic |
| AATAAAACCGACAGTCACAG+AGG | 0.723377 | 1.4:-26765280 | MS.gene053360:CDS |
| TCGATGATAATCGACCAAAG+AGG | 0.737307 | 1.4:-26765162 | MS.gene053360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTATACAATCTTTATTGT+AGG | + | chr1.4:26765775-26765794 | None:intergenic | 20.0% |
| !! | TAAAGATTGTATAAAGTTCA+TGG | - | chr1.4:26765779-26765798 | MS.gene053360:CDS | 20.0% |
| !!! | GAATGATAATGATATTTTCA+TGG | - | chr1.4:26764405-26764424 | MS.gene053360:CDS | 20.0% |
| !!! | TACTTGGTTTGTTTATTTTT+GGG | - | chr1.4:26764713-26764732 | MS.gene053360:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | + | chr1.4:26765523-26765542 | None:intergenic | 25.0% |
| ! | AAAGATTCTTAGATAACAAG+CGG | - | chr1.4:26764755-26764774 | MS.gene053360:CDS | 25.0% |
| ! | ATACAGTTGTTCCTATTAAA+AGG | - | chr1.4:26766384-26766403 | MS.gene053360:intron | 25.0% |
| ! | CAAGAAGAAAAACATTTGAT+TGG | - | chr1.4:26767067-26767086 | MS.gene053360:CDS | 25.0% |
| ! | CTGCTGGTAAAAAATATAAA+GGG | - | chr1.4:26765898-26765917 | MS.gene053360:CDS | 25.0% |
| ! | CTTTGCATATATTTATACTC+AGG | - | chr1.4:26765152-26765171 | MS.gene053360:CDS | 25.0% |
| ! | GAGAAAAACCAAATAATCTT+TGG | + | chr1.4:26765526-26765545 | None:intergenic | 25.0% |
| ! | GATATAATACAATCTTTGAC+TGG | - | chr1.4:26765384-26765403 | MS.gene053360:CDS | 25.0% |
| ! | GCAAATGATATATATATAGC+TGG | + | chr1.4:26765121-26765140 | None:intergenic | 25.0% |
| ! | GTATAAATATATGCAAAGTG+AGG | + | chr1.4:26765150-26765169 | None:intergenic | 25.0% |
| ! | TAATTGGATCACAAACAATT+GGG | + | chr1.4:26766526-26766545 | None:intergenic | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | + | chr1.4:26765094-26765113 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | - | chr1.4:26764784-26764803 | MS.gene053360:CDS | 25.0% |
| !! | GATACAAAAAGTTTTCTACT+TGG | - | chr1.4:26764697-26764716 | MS.gene053360:CDS | 25.0% |
| !! | TTCTGAAAATAGCAAAATGA+TGG | - | chr1.4:26766715-26766734 | MS.gene053360:CDS | 25.0% |
| !!! | CTACTTGGTTTGTTTATTTT+TGG | - | chr1.4:26764712-26764731 | MS.gene053360:CDS | 25.0% |
| AAATAGCAAAATGATGGCAA+TGG | - | chr1.4:26766721-26766740 | MS.gene053360:CDS | 30.0% | |
| AAATCACTTTCCTTTGCAAT+TGG | - | chr1.4:26764565-26764584 | MS.gene053360:CDS | 30.0% | |
| AACTTATGATTCACCAAAGA+TGG | - | chr1.4:26766133-26766152 | MS.gene053360:CDS | 30.0% | |
| ACTTTACTCACTGAATTAAC+AGG | + | chr1.4:26765867-26765886 | None:intergenic | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | - | chr1.4:26764639-26764658 | MS.gene053360:CDS | 30.0% | |
| ATAAAGGGCGAAAATATACA+AGG | - | chr1.4:26765913-26765932 | MS.gene053360:CDS | 30.0% | |
| ATAATACAATCTTTGACTGG+AGG | - | chr1.4:26765387-26765406 | MS.gene053360:CDS | 30.0% | |
| ATCATCATTGTTCAGATCAT+GGG | - | chr1.4:26767029-26767048 | MS.gene053360:CDS | 30.0% | |
| ATCATTATCATTCTCCTCAA+CGG | + | chr1.4:26764398-26764417 | None:intergenic | 30.0% | |
| CTAATTGGATCACAAACAAT+TGG | + | chr1.4:26766527-26766546 | None:intergenic | 30.0% | |
| CTTTATTGTAGGAAGAAGAT+CGG | + | chr1.4:26765764-26765783 | None:intergenic | 30.0% | |
| GAAAAACATTTGATTGGAGA+TGG | - | chr1.4:26767073-26767092 | MS.gene053360:CDS | 30.0% | |
| GCTGCTGGTAAAAAATATAA+AGG | - | chr1.4:26765897-26765916 | MS.gene053360:CDS | 30.0% | |
| GTTTCTAAGTTATATGTGGA+GGG | - | chr1.4:26765174-26765193 | MS.gene053360:CDS | 30.0% | |
| TAATACAATCTTTGACTGGA+GGG | - | chr1.4:26765388-26765407 | MS.gene053360:CDS | 30.0% | |
| TCAGGTTTCTAAGTTATATG+TGG | - | chr1.4:26765170-26765189 | MS.gene053360:CDS | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | - | chr1.4:26765515-26765534 | MS.gene053360:CDS | 30.0% | |
| TTTATTGTAGGAAGAAGATC+GGG | + | chr1.4:26765763-26765782 | None:intergenic | 30.0% | |
| ! | ATAGGACAGAAACTTTTTAG+TGG | - | chr1.4:26764877-26764896 | MS.gene053360:CDS | 30.0% |
| ! | GGAAAGTTTTACAAAACAGA+TGG | - | chr1.4:26764805-26764824 | MS.gene053360:CDS | 30.0% |
| ! | TCATAAAGCATCAGTTCAAT+CGG | - | chr1.4:26766336-26766355 | MS.gene053360:intron | 30.0% |
| ! | TGTTTTTCCAAATAACCAAC+AGG | + | chr1.4:26766821-26766840 | None:intergenic | 30.0% |
| ! | TTTGAAGCATCTTATTGTGA+TGG | - | chr1.4:26765038-26765057 | MS.gene053360:CDS | 30.0% |
| !! | CTTCTTTGAAGTCTATTGTT+GGG | - | chr1.4:26765223-26765242 | MS.gene053360:CDS | 30.0% |
| !! | TAAAGTTGGTAACTGTAATG+AGG | - | chr1.4:26765671-26765690 | MS.gene053360:CDS | 30.0% |
| !!! | TATTTGGTTTTTCTCATTCC+CGG | - | chr1.4:26765531-26765550 | MS.gene053360:CDS | 30.0% |
| AAACAGATGGATATCGTAGA+TGG | - | chr1.4:26764818-26764837 | MS.gene053360:CDS | 35.0% | |
| AACGTTGTTGCATTCTGTTT+AGG | + | chr1.4:26765972-26765991 | None:intergenic | 35.0% | |
| AAGGAAAGTAAACCATAGCA+CGG | - | chr1.4:26765932-26765951 | MS.gene053360:CDS | 35.0% | |
| AATATATGCAAAGTGAGGAC+TGG | + | chr1.4:26765145-26765164 | None:intergenic | 35.0% | |
| ACGTTGTTGCATTCTGTTTA+GGG | + | chr1.4:26765971-26765990 | None:intergenic | 35.0% | |
| ATCGCAAGATACTTTGTTAC+AGG | - | chr1.4:26764951-26764970 | MS.gene053360:CDS | 35.0% | |
| ATTCTTAGATAACAAGCGGA+TGG | - | chr1.4:26764759-26764778 | MS.gene053360:CDS | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | - | chr1.4:26765804-26765823 | MS.gene053360:CDS | 35.0% | |
| ATTGTTGAGAATTCTTCAGG+AGG | - | chr1.4:26766446-26766465 | MS.gene053360:intron | 35.0% | |
| CAAATGTAACGATCTCTTCT+GGG | - | chr1.4:26765428-26765447 | MS.gene053360:CDS | 35.0% | |
| CAGTTGTTCCTATTAAAAGG+AGG | - | chr1.4:26766387-26766406 | MS.gene053360:intron | 35.0% | |
| CATCATCATTGTTCAGATCA+TGG | - | chr1.4:26767028-26767047 | MS.gene053360:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr1.4:26765797-26765816 | MS.gene053360:CDS | 35.0% | |
| CATTATGTATCCATGTGACT+GGG | + | chr1.4:26764600-26764619 | None:intergenic | 35.0% | |
| CCAACAATAGACTTCAAAGA+AGG | + | chr1.4:26765225-26765244 | None:intergenic | 35.0% | |
| CGATAATGATGCAAACAAGA+TGG | - | chr1.4:26766256-26766275 | MS.gene053360:CDS | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr1.4:26766445-26766464 | None:intergenic | 35.0% | |
| GAACCTAAAATGCTGATATG+TGG | - | chr1.4:26766158-26766177 | MS.gene053360:CDS | 35.0% | |
| GGTGCGATGTAATGAAAAAA+AGG | + | chr1.4:26765100-26765119 | None:intergenic | 35.0% | |
| GGTTTCTAAGTTATATGTGG+AGG | - | chr1.4:26765173-26765192 | MS.gene053360:CDS | 35.0% | |
| TCAGAGTGCAGGAAAAAAAA+GGG | - | chr1.4:26764841-26764860 | MS.gene053360:CDS | 35.0% | |
| TCATTATGTATCCATGTGAC+TGG | + | chr1.4:26764601-26764620 | None:intergenic | 35.0% | |
| TCCTTCCATGCTTAAGAAAT+CGG | - | chr1.4:26764492-26764511 | MS.gene053360:CDS | 35.0% | |
| TGATGCTTTATGATCCTCTT+TGG | + | chr1.4:26766329-26766348 | None:intergenic | 35.0% | |
| TGGATACATAATGAAGAGTG+TGG | - | chr1.4:26764607-26764626 | MS.gene053360:CDS | 35.0% | |
| TTATGATTCACCAAAGATGG+TGG | - | chr1.4:26766136-26766155 | MS.gene053360:CDS | 35.0% | |
| TTATTGTAGGAAGAAGATCG+GGG | + | chr1.4:26765762-26765781 | None:intergenic | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | + | chr1.4:26765837-26765856 | None:intergenic | 35.0% | |
| TTCTTAGATAACAAGCGGAT+GGG | - | chr1.4:26764760-26764779 | MS.gene053360:CDS | 35.0% | |
| ! | AATGAAGAGTGTGGATATCA+TGG | - | chr1.4:26764616-26764635 | MS.gene053360:CDS | 35.0% |
| ! | CTTGATTTGAGTCCTAGAAT+AGG | - | chr1.4:26764448-26764467 | MS.gene053360:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | + | chr1.4:26766398-26766417 | None:intergenic | 35.0% |
| ! | TTGCCACATATCAGCATTTT+AGG | + | chr1.4:26766164-26766183 | None:intergenic | 35.0% |
| ! | TTGGTAACTGTAATGAGGAA+GGG | - | chr1.4:26765676-26765695 | MS.gene053360:CDS | 35.0% |
| ! | TTTTAGACATATCCGTGCTA+TGG | + | chr1.4:26765947-26765966 | None:intergenic | 35.0% |
| !! | ATGAAAAAAAGGTACTGGTG+TGG | + | chr1.4:26765089-26765108 | None:intergenic | 35.0% |
| !! | CCTTCTTTGAAGTCTATTGT+TGG | - | chr1.4:26765222-26765241 | MS.gene053360:CDS | 35.0% |
| !! | CTATTCTAGGACTCAAATCA+AGG | + | chr1.4:26764450-26764469 | None:intergenic | 35.0% |
| !! | TGAAAAAAAGGTACTGGTGT+GGG | + | chr1.4:26765088-26765107 | None:intergenic | 35.0% |
| !! | TTCTGACGGAAAAGTATTGA+AGG | - | chr1.4:26766016-26766035 | MS.gene053360:CDS | 35.0% |
| !!! | ATTTTAGGTTCCACCATCTT+TGG | + | chr1.4:26766149-26766168 | None:intergenic | 35.0% |
| AATAAAACCGACAGTCACAG+AGG | - | chr1.4:26766194-26766213 | MS.gene053360:CDS | 40.0% | |
| AATCTTTGACTGGAGGGTTT+CGG | - | chr1.4:26765394-26765413 | MS.gene053360:CDS | 40.0% | |
| AGACACATGAGTAATCAAGC+GGG | + | chr1.4:26764926-26764945 | None:intergenic | 40.0% | |
| AGTGCAGGAAAAAAAAGGGA+GGG | - | chr1.4:26764845-26764864 | MS.gene053360:CDS | 40.0% | |
| CAGACACATGAGTAATCAAG+CGG | + | chr1.4:26764927-26764946 | None:intergenic | 40.0% | |
| CCAAATGTAACGATCTCTTC+TGG | - | chr1.4:26765427-26765446 | MS.gene053360:CDS | 40.0% | |
| CCAGAAGAGATCGTTACATT+TGG | + | chr1.4:26765430-26765449 | None:intergenic | 40.0% | |
| CGATTCTGCTGATGACTAAT+TGG | + | chr1.4:26766542-26766561 | None:intergenic | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr1.4:26766443-26766462 | MS.gene053360:intron | 40.0% | |
| CTTTCACTTAGCAAGAATCC+TGG | - | chr1.4:26764520-26764539 | MS.gene053360:CDS | 40.0% | |
| GAAGACAAAGCTTTGCAAGT+TGG | + | chr1.4:26765351-26765370 | None:intergenic | 40.0% | |
| GACAAAAGTTCATGTTGCCT+CGG | + | chr1.4:26764904-26764923 | None:intergenic | 40.0% | |
| GATGGGTAAACCAATTGCAA+AGG | + | chr1.4:26764578-26764597 | None:intergenic | 40.0% | |
| GCATCTTCTAATTCAACTGG+CGG | + | chr1.4:26766065-26766084 | None:intergenic | 40.0% | |
| GTAACATAGCCTCGATTCTT+TGG | + | chr1.4:26765501-26765520 | None:intergenic | 40.0% | |
| GTCAGAGTGCAGGAAAAAAA+AGG | - | chr1.4:26764840-26764859 | MS.gene053360:CDS | 40.0% | |
| TAGCAAAATGATGGCAATGG+CGG | - | chr1.4:26766724-26766743 | MS.gene053360:CDS | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | + | chr1.4:26766890-26766909 | None:intergenic | 40.0% | |
| TCCGATTTCTTAAGCATGGA+AGG | + | chr1.4:26764496-26764515 | None:intergenic | 40.0% | |
| TCGATGATAATCGACCAAAG+AGG | - | chr1.4:26766312-26766331 | MS.gene053360:intron | 40.0% | |
| TCGATTATCATCGAACACAC+AGG | + | chr1.4:26766306-26766325 | None:intergenic | 40.0% | |
| TCTTAGATAACAAGCGGATG+GGG | - | chr1.4:26764761-26764780 | MS.gene053360:CDS | 40.0% | |
| TCTTCATTTGATCCCCTTTC+TGG | + | chr1.4:26765702-26765721 | None:intergenic | 40.0% | |
| TGAAAGGATCTTTGTGTGTC+TGG | + | chr1.4:26766967-26766986 | None:intergenic | 40.0% | |
| TGGATCACAAACAATTGGGT+TGG | + | chr1.4:26766522-26766541 | None:intergenic | 40.0% | |
| TGGTACTCATGACCTATTCT+AGG | + | chr1.4:26764463-26764482 | None:intergenic | 40.0% | |
| TGTCTCCTAGGATTTATGTC+AGG | + | chr1.4:26766851-26766870 | None:intergenic | 40.0% | |
| TTCAATCGGAGAGTAAGATC+AGG | - | chr1.4:26766350-26766369 | MS.gene053360:intron | 40.0% | |
| TTGAAGTCTATTGTTGGGCT+TGG | - | chr1.4:26765228-26765247 | MS.gene053360:CDS | 40.0% | |
| TTTCAGTTTCAACATGCCTC+AGG | - | chr1.4:26766682-26766701 | MS.gene053360:CDS | 40.0% | |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr1.4:26766766-26766785 | None:intergenic | 40.0% |
| ! | GATACCAATCGACTTTCTGA+CGG | - | chr1.4:26766002-26766021 | MS.gene053360:CDS | 40.0% |
| ! | GGAGCATCTTCTAATTCAAC+TGG | + | chr1.4:26766068-26766087 | None:intergenic | 40.0% |
| ! | GGTCTTTGGAGAGAAAGTAA+GGG | - | chr1.4:26766101-26766120 | MS.gene053360:CDS | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr1.4:26765354-26765373 | MS.gene053360:CDS | 40.0% |
| ! | TGCCTTTTGTTCGAGCAATT+CGG | + | chr1.4:26766997-26767016 | None:intergenic | 40.0% |
| ! | TGGTCTTTGGAGAGAAAGTA+AGG | - | chr1.4:26766100-26766119 | MS.gene053360:CDS | 40.0% |
| ! | TTTCTAGTGCTTTGTCTCCT+AGG | + | chr1.4:26766863-26766882 | None:intergenic | 40.0% |
| ! | TTTTCCGTCAGAAAGTCGAT+TGG | + | chr1.4:26766009-26766028 | None:intergenic | 40.0% |
| ! | TTTTGTATCTGCATCAGTCC+AGG | + | chr1.4:26764686-26764705 | None:intergenic | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | - | chr1.4:26765882-26765901 | MS.gene053360:CDS | 40.0% |
| !! | AGAAACTTTTTAGTGGACCG+AGG | - | chr1.4:26764884-26764903 | MS.gene053360:CDS | 40.0% |
| !! | GTTGGTAACTGTAATGAGGA+AGG | - | chr1.4:26765675-26765694 | MS.gene053360:CDS | 40.0% |
| AAGAGAGACCTTACTAGGCT+TGG | - | chr1.4:26765285-26765304 | MS.gene053360:CDS | 45.0% | |
| AAGGGAGGGAAACGTATGAT+AGG | - | chr1.4:26764859-26764878 | MS.gene053360:CDS | 45.0% | |
| AATTCATGTCAATTGGCCCC+TGG | - | chr1.4:26764646-26764665 | MS.gene053360:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | - | chr1.4:26766886-26766905 | MS.gene053360:CDS | 45.0% | |
| AGATACACCTCTGTGACTGT+CGG | + | chr1.4:26766204-26766223 | None:intergenic | 45.0% | |
| AGGAGAAGAGAGACCTTACT+AGG | - | chr1.4:26765280-26765299 | MS.gene053360:CDS | 45.0% | |
| ATGTATCCATGTGACTGGGA+TGG | + | chr1.4:26764596-26764615 | None:intergenic | 45.0% | |
| ATGTCTAACAGATGCCACTC+AGG | - | chr1.4:26766781-26766800 | MS.gene053360:CDS | 45.0% | |
| CAAAGACCAGTAGTCGTTGT+GGG | + | chr1.4:26766089-26766108 | None:intergenic | 45.0% | |
| CCTCGAAAACTTCTCAACAC+CGG | + | chr1.4:26765553-26765572 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | - | chr1.4:26765827-26765846 | MS.gene053360:CDS | 45.0% | |
| CTAGGATTTATGTCAGGCTG+AGG | + | chr1.4:26766845-26766864 | None:intergenic | 45.0% | |
| CTCAGCCTGACATAAATCCT+AGG | - | chr1.4:26766843-26766862 | MS.gene053360:CDS | 45.0% | |
| CTCGAAAACTTCTCAACACC+GGG | + | chr1.4:26765552-26765571 | None:intergenic | 45.0% | |
| CTCGAGGAAGAAGCTAAAGT+TGG | - | chr1.4:26765657-26765676 | MS.gene053360:CDS | 45.0% | |
| CTGCTCCGATTTCTTAAGCA+TGG | + | chr1.4:26764500-26764519 | None:intergenic | 45.0% | |
| CTTAGATAACAAGCGGATGG+GGG | - | chr1.4:26764762-26764781 | MS.gene053360:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | - | chr1.4:26765255-26765274 | MS.gene053360:CDS | 45.0% | |
| GAGTGCAGGAAAAAAAAGGG+AGG | - | chr1.4:26764844-26764863 | MS.gene053360:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | - | chr1.4:26765807-26765826 | MS.gene053360:CDS | 45.0% | |
| GCAACTCGAAAGCTAGAAGA+CGG | + | chr1.4:26766500-26766519 | None:intergenic | 45.0% | |
| GCAATTCGGCAAGGATTGAA+AGG | + | chr1.4:26766983-26767002 | None:intergenic | 45.0% | |
| GCATGGAAGGAATTTCTGCT+TGG | + | chr1.4:26764483-26764502 | None:intergenic | 45.0% | |
| GGTGTGGGATCAGATAATCT+AGG | - | chr1.4:26766467-26766486 | MS.gene053360:intron | 45.0% | |
| TAATGAGGAAGGGCCAGAAA+GGG | - | chr1.4:26765686-26765705 | MS.gene053360:CDS | 45.0% | |
| TCAGAATTCGACAGAACCTG+AGG | + | chr1.4:26766701-26766720 | None:intergenic | 45.0% | |
| TCCTCGAGCACGAGAATATT+CGG | + | chr1.4:26765645-26765664 | None:intergenic | 45.0% | |
| TCGAGGAGGAAACTTGTGAA+AGG | - | chr1.4:26765567-26765586 | MS.gene053360:CDS | 45.0% | |
| TCTGAGCAACCAAAGAATCG+AGG | - | chr1.4:26765489-26765508 | MS.gene053360:CDS | 45.0% | |
| TGAGAATTCTTCAGGAGGTG+TGG | - | chr1.4:26766451-26766470 | MS.gene053360:intron | 45.0% | |
| TGAGTGGCATCTGTTAGACA+TGG | + | chr1.4:26766782-26766801 | None:intergenic | 45.0% | |
| TGCACAGATTCTGAATCACC+AGG | + | chr1.4:26764541-26764560 | None:intergenic | 45.0% | |
| TGCCGAATTGCTCGAACAAA+AGG | - | chr1.4:26766992-26767011 | MS.gene053360:CDS | 45.0% | |
| TGTATCCATGTGACTGGGAT+GGG | + | chr1.4:26764595-26764614 | None:intergenic | 45.0% | |
| TTCTTCAGCAGACAGAATCC+TGG | - | chr1.4:26766574-26766593 | MS.gene053360:CDS | 45.0% | |
| TTTGTTCGAGCAATTCGGCA+AGG | + | chr1.4:26766992-26767011 | None:intergenic | 45.0% | |
| ! | AATGCGGCTTTTCTCTTCCT+TGG | + | chr1.4:26766429-26766448 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr1.4:26765439-26765458 | MS.gene053360:CDS | 45.0% |
| ! | CACAGAGGTGTATCTAACAG+CGG | - | chr1.4:26766209-26766228 | MS.gene053360:CDS | 45.0% |
| ! | CTTTGGAGAGAAAGTAAGGG+TGG | - | chr1.4:26766104-26766123 | MS.gene053360:CDS | 45.0% |
| ! | GAGAATTCTTCAGGAGGTGT+GGG | - | chr1.4:26766452-26766471 | MS.gene053360:intron | 45.0% |
| ! | TGAGGAGCCTGTTGGTTATT+TGG | - | chr1.4:26766811-26766830 | MS.gene053360:CDS | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | - | chr1.4:26765260-26765279 | MS.gene053360:CDS | 45.0% |
| !! | GTGTTGAGAAGTTTTCGAGG+AGG | - | chr1.4:26765553-26765572 | MS.gene053360:CDS | 45.0% |
| AATGAGGAAGGGCCAGAAAG+GGG | - | chr1.4:26765687-26765706 | MS.gene053360:CDS | 50.0% | |
| ACCGAATATTCTCGTGCTCG+AGG | - | chr1.4:26765641-26765660 | MS.gene053360:CDS | 50.0% | |
| ATCGTAGATGGTCAGAGTGC+AGG | - | chr1.4:26764830-26764849 | MS.gene053360:CDS | 50.0% | |
| CAAAATGATGGCAATGGCGG+AGG | - | chr1.4:26766727-26766746 | MS.gene053360:CDS | 50.0% | |
| CAGTCCAGGAGCTACTCAAT+CGG | + | chr1.4:26764672-26764691 | None:intergenic | 50.0% | |
| CCAAAGACCAGTAGTCGTTG+TGG | + | chr1.4:26766090-26766109 | None:intergenic | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | + | chr1.4:26766798-26766817 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | + | chr1.4:26765814-26765833 | None:intergenic | 50.0% | |
| GAAGTAGTTGAGGAGCCTGT+TGG | - | chr1.4:26766803-26766822 | MS.gene053360:CDS | 50.0% | |
| GAGATTGACTGCTTGTGCCA+AGG | - | chr1.4:26766409-26766428 | MS.gene053360:intron | 50.0% | |
| GCCTGTGAAGAACAGTCGTA+AGG | - | chr1.4:26765314-26765333 | MS.gene053360:CDS | 50.0% | |
| GCCTTACGACTGTTCTTCAC+AGG | + | chr1.4:26765318-26765337 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | - | chr1.4:26765826-26765845 | MS.gene053360:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | - | chr1.4:26765249-26765268 | MS.gene053360:CDS | 50.0% | |
| GTAATGAGGAAGGGCCAGAA+AGG | - | chr1.4:26765685-26765704 | MS.gene053360:CDS | 50.0% | |
| GTTTACCCATCCCAGTCACA+TGG | - | chr1.4:26764587-26764606 | MS.gene053360:CDS | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | - | chr1.4:26766793-26766812 | MS.gene053360:CDS | 50.0% | |
| TTTCATCATCCTCCTCTGCC+AGG | + | chr1.4:26766595-26766614 | None:intergenic | 50.0% | |
| !! | CACAGGCGTGTTGATTTCTC+TGG | + | chr1.4:26766289-26766308 | None:intergenic | 50.0% |
| !! | CCACAACGACTACTGGTCTT+TGG | - | chr1.4:26766087-26766106 | MS.gene053360:CDS | 50.0% |
| !! | CCGGTGTTGAGAAGTTTTCG+AGG | - | chr1.4:26765550-26765569 | MS.gene053360:CDS | 50.0% |
| !! | TGTTGGGCTTGGTGTTCTTG+TGG | - | chr1.4:26765239-26765258 | MS.gene053360:CDS | 50.0% |
| AGACAGAATCCTGGCAGAGG+AGG | - | chr1.4:26766583-26766602 | MS.gene053360:CDS | 55.0% | |
| AGCAGACAGAATCCTGGCAG+AGG | - | chr1.4:26766580-26766599 | MS.gene053360:CDS | 55.0% | |
| AGGAAGAAGATCGGGGCTTG+AGG | + | chr1.4:26765755-26765774 | None:intergenic | 55.0% | |
| AGGAGCTACTCAATCGGCCA+GGG | + | chr1.4:26764666-26764685 | None:intergenic | 55.0% | |
| ATGGAGCACGTGTCTCACGA+AGG | - | chr1.4:26764424-26764443 | MS.gene053360:CDS | 55.0% | |
| CAACCTCTTGCCAGTAAGCG+GGG | + | chr1.4:26765465-26765484 | None:intergenic | 55.0% | |
| CCAACCTCTTGCCAGTAAGC+GGG | + | chr1.4:26765466-26765485 | None:intergenic | 55.0% | |
| GATGCTCCCACAACGACTAC+TGG | - | chr1.4:26766080-26766099 | MS.gene053360:CDS | 55.0% | |
| GCCAACCTCTTGCCAGTAAG+CGG | + | chr1.4:26765467-26765486 | None:intergenic | 55.0% | |
| GCTCGACACCAAGCCTAGTA+AGG | + | chr1.4:26765296-26765315 | None:intergenic | 55.0% | |
| ! | ATGATGGCAATGGCGGAGGA+AGG | - | chr1.4:26766731-26766750 | MS.gene053360:CDS | 55.0% |
| !! | AGGTACTGGTGTGGGCATAG+AGG | + | chr1.4:26765080-26765099 | None:intergenic | 55.0% |
| AGCTGTTTGGCCCCGCTTAC+TGG | - | chr1.4:26765452-26765471 | MS.gene053360:CDS | 60.0% | |
| CAGGAGCTACTCAATCGGCC+AGG | + | chr1.4:26764667-26764686 | None:intergenic | 60.0% | |
| CCCGCTTACTGGCAAGAGGT+TGG | - | chr1.4:26765463-26765482 | MS.gene053360:CDS | 60.0% | |
| CTGGCCGATTGAGTAGCTCC+TGG | - | chr1.4:26764665-26764684 | MS.gene053360:CDS | 60.0% | |
| GGAAGGCGGGCAACACCTAA+AGG | - | chr1.4:26766748-26766767 | MS.gene053360:CDS | 60.0% | |
| GGAGCTACTCAATCGGCCAG+GGG | + | chr1.4:26764665-26764684 | None:intergenic | 60.0% | |
| ! | ATGGCAATGGCGGAGGAAGG+CGG | - | chr1.4:26766734-26766753 | MS.gene053360:CDS | 60.0% |
| TGGCCCCGCTTACTGGCAAG+AGG | - | chr1.4:26765459-26765478 | MS.gene053360:CDS | 65.0% | |
| ! | TGGCAATGGCGGAGGAAGGC+GGG | - | chr1.4:26766735-26766754 | MS.gene053360:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 26764388 | 26767108 | 26764388 | ID=MS.gene053360 |
| chr1.4 | mRNA | 26764388 | 26767108 | 26764388 | ID=MS.gene053360.t1;Parent=MS.gene053360 |
| chr1.4 | exon | 26766524 | 26767108 | 26766524 | ID=MS.gene053360.t1.exon1;Parent=MS.gene053360.t1 |
| chr1.4 | CDS | 26766524 | 26767108 | 26766524 | ID=cds.MS.gene053360.t1;Parent=MS.gene053360.t1 |
| chr1.4 | exon | 26764388 | 26766322 | 26764388 | ID=MS.gene053360.t1.exon2;Parent=MS.gene053360.t1 |
| chr1.4 | CDS | 26764388 | 26766322 | 26764388 | ID=cds.MS.gene053360.t1;Parent=MS.gene053360.t1 |
| Gene Sequence |
| Protein sequence |
