Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050890.t1 | RHN49267.1 | 92.5 | 749 | 54 | 2 | 1 | 749 | 26 | 772 | 0.00E+00 | 1345.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050890.t1 | G7KYL7 | 92.5 | 749 | 54 | 2 | 1 | 749 | 1 | 747 | 0.0e+00 | 1345.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072484 | MS.gene050890 | PPI |
| MS.gene67159 | MS.gene050890 | PPI |
| MS.gene050889 | MS.gene050890 | PPI |
| MS.gene050890 | MS.gene050891 | PPI |
| MS.gene050890 | MS.gene78588 | PPI |
| MS.gene072481 | MS.gene050890 | PPI |
| MS.gene072542 | MS.gene050890 | PPI |
| MS.gene78588 | MS.gene050890 | PPI |
| MS.gene072483 | MS.gene050890 | PPI |
| MS.gene29350 | MS.gene050890 | PPI |
| MS.gene78584 | MS.gene050890 | PPI |
| MS.gene050890 | MS.gene072485 | PPI |
| MS.gene29352 | MS.gene050890 | PPI |
| MS.gene050738 | MS.gene050890 | PPI |
| MS.gene063225 | MS.gene050890 | PPI |
| MS.gene050890 | MS.gene78584 | PPI |
| MS.gene050890 | MS.gene78586 | PPI |
| MS.gene65461 | MS.gene050890 | PPI |
| MS.gene78587 | MS.gene050890 | PPI |
| MS.gene050890 | MS.gene050892 | PPI |
| MS.gene050893 | MS.gene050890 | PPI |
| MS.gene29351 | MS.gene050890 | PPI |
| MS.gene050890 | MS.gene050942 | PPI |
| MS.gene050942 | MS.gene050890 | PPI |
| MS.gene78585 | MS.gene050890 | PPI |
| MS.gene053360 | MS.gene050890 | PPI |
| MS.gene054416 | MS.gene050890 | PPI |
| MS.gene050890 | MS.gene072482 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050890.t1 | MTR_7g113280 | 92.523 | 749 | 54 | 2 | 1 | 749 | 1 | 747 | 0.0 | 1422 |
| MS.gene050890.t1 | MTR_1g041895 | 67.547 | 795 | 205 | 8 | 1 | 749 | 1 | 788 | 0.0 | 996 |
| MS.gene050890.t1 | MTR_7g113270 | 69.801 | 755 | 203 | 10 | 1 | 749 | 1 | 736 | 0.0 | 961 |
| MS.gene050890.t1 | MTR_7g113220 | 68.435 | 754 | 211 | 11 | 1 | 749 | 1 | 732 | 0.0 | 943 |
| MS.gene050890.t1 | MTR_7g113250 | 73.672 | 433 | 112 | 2 | 14 | 445 | 2 | 433 | 0.0 | 647 |
| MS.gene050890.t1 | MTR_7g113250 | 63.580 | 162 | 55 | 2 | 588 | 749 | 434 | 591 | 1.25e-51 | 191 |
| MS.gene050890.t1 | MTR_7g112390 | 59.780 | 455 | 87 | 6 | 105 | 537 | 1 | 381 | 9.64e-161 | 483 |
| MS.gene050890.t1 | MTR_7g112390 | 60.190 | 211 | 45 | 4 | 537 | 746 | 478 | 650 | 2.68e-59 | 214 |
| MS.gene050890.t1 | MTR_7g108470 | 46.921 | 341 | 169 | 4 | 68 | 401 | 140 | 475 | 7.00e-94 | 313 |
| MS.gene050890.t1 | MTR_4g119630 | 42.330 | 352 | 160 | 5 | 19 | 332 | 37 | 383 | 3.30e-84 | 275 |
| MS.gene050890.t1 | MTR_3g049350 | 74.556 | 169 | 42 | 1 | 278 | 445 | 3 | 171 | 2.11e-75 | 245 |
| MS.gene050890.t1 | MTR_3g049350 | 55.000 | 80 | 33 | 1 | 588 | 667 | 172 | 248 | 1.49e-17 | 84.0 |
| MS.gene050890.t1 | MTR_2g436970 | 37.705 | 305 | 178 | 5 | 26 | 330 | 17 | 309 | 6.26e-60 | 209 |
| MS.gene050890.t1 | MTR_7g113290 | 68.966 | 116 | 33 | 1 | 527 | 642 | 13 | 125 | 5.31e-41 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050890.t1 | AT1G09040 | 38.041 | 531 | 244 | 13 | 70 | 572 | 138 | 611 | 4.98e-94 | 313 |
| MS.gene050890.t1 | AT1G09050 | 45.968 | 372 | 182 | 7 | 73 | 435 | 145 | 506 | 2.00e-91 | 306 |
| MS.gene050890.t1 | AT1G09050 | 45.968 | 372 | 182 | 7 | 73 | 435 | 145 | 506 | 2.00e-91 | 306 |
| MS.gene050890.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 1.11e-86 | 291 |
| MS.gene050890.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 1.11e-86 | 291 |
| MS.gene050890.t1 | AT1G55050 | 37.066 | 518 | 273 | 11 | 73 | 580 | 128 | 602 | 8.78e-79 | 272 |
| MS.gene050890.t1 | AT1G55050 | 37.066 | 518 | 273 | 11 | 73 | 580 | 128 | 602 | 8.78e-79 | 272 |
Find 152 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAAGCCATCTGATTTC+AGG | 0.202807 | 7.1:+3093364 | MS.gene050890:CDS |
| TAACTGAATGACAGACATTT+TGG | 0.202825 | 7.1:-3094004 | None:intergenic |
| CCAAAAGTGTCGATCTCTTC+TGG | 0.207679 | 7.1:+3092962 | MS.gene050890:CDS |
| TAAAGATCATATAAAATTAA+TGG | 0.218425 | 7.1:+3093317 | MS.gene050890:CDS |
| TGCAAAGCTCTGTCTTCTTT+TGG | 0.219428 | 7.1:+3092889 | MS.gene050890:CDS |
| AAAGGGAGAAAATGTATAAT+AGG | 0.228776 | 7.1:+3092346 | MS.gene050890:CDS |
| ACCTTGTGATGTTGATTCTT+TGG | 0.236319 | 7.1:+3094319 | MS.gene050890:CDS |
| GGAATTTCTGCCTGGTATTC+AGG | 0.255405 | 7.1:-3092037 | None:intergenic |
| TGGCTTTCAACCATCTTGTT+TGG | 0.265434 | 7.1:-3093747 | None:intergenic |
| AAGAAAGACCAGATATTCTT+TGG | 0.279773 | 7.1:-3093058 | None:intergenic |
| AGCTGTTTGGCCTCGATTAC+TGG | 0.281580 | 7.1:+3092987 | MS.gene050890:CDS |
| TCGGAGTGCAGGAAATTAAA+AGG | 0.293911 | 7.1:+3092328 | MS.gene050890:CDS |
| CCAGAAGAGATCGACACTTT+TGG | 0.296338 | 7.1:-3092962 | None:intergenic |
| TGTCTCCTTGGATTTATATC+AGG | 0.302477 | 7.1:-3094350 | None:intergenic |
| TTGAATTGGAAGATGCTTCT+AGG | 0.302937 | 7.1:+3093604 | MS.gene050890:CDS |
| ATGCAGCTGTTCCTATTAAA+AGG | 0.307883 | 7.1:+3093865 | MS.gene050890:CDS |
| ACTTTACAAACTGAATTAAC+AGG | 0.318377 | 7.1:-3093402 | None:intergenic |
| TGAGAATTCTTCAGGAGGTT+TGG | 0.326165 | 7.1:+3093932 | MS.gene050890:CDS |
| AATTCAACTGACGGATATTT+CGG | 0.333248 | 7.1:-3093588 | None:intergenic |
| TATCTGGTCTTTCTTATTCC+TGG | 0.333602 | 7.1:+3093066 | MS.gene050890:CDS |
| GAAATATCCGTCAGTTGAAT+TGG | 0.333878 | 7.1:+3093590 | MS.gene050890:CDS |
| TCTTCAAGCTCAAGAATATT+CGG | 0.336030 | 7.1:-3093177 | None:intergenic |
| GAGAATTCTTCAGGAGGTTT+GGG | 0.337535 | 7.1:+3093933 | MS.gene050890:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.339278 | 7.1:+3092974 | MS.gene050890:CDS |
| AATCCTTGACAGGAAGATTT+CGG | 0.340794 | 7.1:+3092929 | MS.gene050890:CDS |
| TATAATAGGGAAGAAACTTT+TGG | 0.348101 | 7.1:+3092360 | MS.gene050890:CDS |
| GCTGCTGGTGTAAAAGATAA+AGG | 0.352913 | 7.1:+3093435 | MS.gene050890:CDS |
| AAATCACTTTCCTCTGCAAT+AGG | 0.356126 | 7.1:+3092130 | MS.gene050890:CDS |
| AGGTTTGGGATCAGATAAAC+TGG | 0.360856 | 7.1:+3093947 | MS.gene050890:CDS |
| GATACCAGTTTGGTGCATAA+AGG | 0.364116 | 7.1:+3093345 | MS.gene050890:CDS |
| TTTCTAGTGCTCTGTCTCCT+TGG | 0.375889 | 7.1:-3094362 | None:intergenic |
| CACATCACTGAGAATTCTTC+AGG | 0.383165 | 7.1:+3093924 | MS.gene050890:CDS |
| CTTCTGTGTTTGATGATAAT+CGG | 0.390702 | 7.1:+3093784 | MS.gene050890:CDS |
| TGTTACCTCCAAAGAATATC+TGG | 0.396531 | 7.1:+3093050 | MS.gene050890:CDS |
| TTTATTGTAGGTAAAAGATC+GGG | 0.411701 | 7.1:-3093298 | None:intergenic |
| AAGGGAGAAAATGTATAATA+GGG | 0.412435 | 7.1:+3092347 | MS.gene050890:CDS |
| AAAGATCATATAAAATTAAT+GGG | 0.413384 | 7.1:+3093318 | MS.gene050890:CDS |
| AATGGGTATTGATACCAGTT+TGG | 0.424546 | 7.1:+3093335 | MS.gene050890:CDS |
| CTTTCCTTTATGCACCAAAC+TGG | 0.426656 | 7.1:-3093349 | None:intergenic |
| TTCAATCAGAGAGTAATATC+TGG | 0.436616 | 7.1:+3093831 | MS.gene050890:CDS |
| CAAAAGTGTCGATCTCTTCT+GGG | 0.438413 | 7.1:+3092963 | MS.gene050890:CDS |
| CGTCGACATTGTTCAGATCA+TGG | 0.443605 | 7.1:+3094524 | MS.gene050890:CDS |
| CTCGAAAACTTCTCAACGCC+AGG | 0.461495 | 7.1:-3093084 | None:intergenic |
| AGGAAAGCCATCTGATTTCA+GGG | 0.463547 | 7.1:+3093365 | MS.gene050890:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.1:+3092317 | MS.gene050890:CDS |
| AACTGATGATTCACGAAGAA+TGG | 0.471427 | 7.1:+3093668 | MS.gene050890:CDS |
| ACAGATTTCGATGAAACCTT+GGG | 0.475240 | 7.1:-3094185 | None:intergenic |
| AGGCCATGCTCACCTTTCTC+TGG | 0.475404 | 7.1:-3094233 | None:intergenic |
| TACAGATTTCGATGAAACCT+TGG | 0.477217 | 7.1:-3094186 | None:intergenic |
| GCAGAATTCGACAAAGTTGA+CGG | 0.478357 | 7.1:+3093512 | MS.gene050890:CDS |
| GTTCCACATCAAGCCTAGTA+AGG | 0.483315 | 7.1:-3092828 | None:intergenic |
| ATGTCTAGCATCAGCCGCTC+AGG | 0.485261 | 7.1:+3094271 | MS.gene050890:CDS |
| GATATAATTCAATCCTTGAC+AGG | 0.488303 | 7.1:+3092919 | MS.gene050890:CDS |
| AAAGTTGAGGCAGGTGCTGC+TGG | 0.488918 | 7.1:+3093420 | MS.gene050890:CDS |
| AAAGATTCATAGAGAACAAA+CGG | 0.491729 | 7.1:+3092242 | MS.gene050890:CDS |
| CTTGTGGAAGCAGTAAGTAT+TGG | 0.492851 | 7.1:+3092790 | MS.gene050890:CDS |
| AGGAGAAGGGAGACCTTACT+AGG | 0.496067 | 7.1:+3092815 | MS.gene050890:CDS |
| TCAGTTTGTAAAGTTGAGGC+AGG | 0.497900 | 7.1:+3093411 | MS.gene050890:CDS |
| CTTTATTGTAGGTAAAAGAT+CGG | 0.498545 | 7.1:-3093299 | None:intergenic |
| GTAACATAGCCTTGATACAT+TGG | 0.499915 | 7.1:-3093033 | None:intergenic |
| ATCATTGACAGTTAGAGCAT+TGG | 0.500083 | 7.1:+3094388 | MS.gene050890:CDS |
| ATGGTGACGGCGCCAGAGAA+AGG | 0.500312 | 7.1:+3094221 | MS.gene050890:CDS |
| AGTAAGTATTGGCAAGGAGA+AGG | 0.505358 | 7.1:+3092801 | MS.gene050890:CDS |
| GCCCCAGGACTGTTCTTCCT+AGG | 0.508970 | 7.1:-3092850 | None:intergenic |
| ATACTCCATGTGACTGGGAT+GGG | 0.509555 | 7.1:-3092157 | None:intergenic |
| GAACCTAGGAAGAACAGTCC+TGG | 0.510751 | 7.1:+3092847 | MS.gene050890:CDS |
| CTGCTGGTGTAAAAGATAAA+GGG | 0.519980 | 7.1:+3093436 | MS.gene050890:CDS |
| CAATGAGGAAGAGCCAGAAA+AGG | 0.522275 | 7.1:+3093224 | MS.gene050890:CDS |
| TGAAACCTTGGGTCTGTTGA+GGG | 0.523167 | 7.1:-3094174 | None:intergenic |
| ATGAAACCTTGGGTCTGTTG+AGG | 0.523435 | 7.1:-3094175 | None:intergenic |
| TCTTATATGAAGTCTACTGT+TGG | 0.528919 | 7.1:+3092757 | MS.gene050890:CDS |
| TCTGATTGCTCAATCAAAGA+AGG | 0.529069 | 7.1:-3092058 | None:intergenic |
| TCGAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.1:+3093102 | MS.gene050890:CDS |
| AAACTGATGGATATCGTAGA+TGG | 0.530913 | 7.1:+3092305 | MS.gene050890:CDS |
| ATCATAATCATTCTGCTCAA+AGG | 0.531350 | 7.1:-3091960 | None:intergenic |
| TCAGCAATACTCCATGTGAC+TGG | 0.532987 | 7.1:-3092163 | None:intergenic |
| ATGAAGTCTACTGTTGGACT+TGG | 0.533142 | 7.1:+3092763 | MS.gene050890:CDS |
| TCGAATCGGTCCTGAATACC+AGG | 0.536009 | 7.1:+3092027 | MS.gene050890:CDS |
| GACACAAATAGCTTTGTACT+AGG | 0.536661 | 7.1:+3092184 | MS.gene050890:CDS |
| GACATGAATCATTTGCCTCT+AGG | 0.537768 | 7.1:-3094253 | None:intergenic |
| AGCCGCTCAGGAAGTAGTTG+AGG | 0.539080 | 7.1:+3094283 | MS.gene050890:CDS |
| TGTTGGACTTGGCGTTCTTG+TGG | 0.539550 | 7.1:+3092774 | MS.gene050890:CDS |
| GTTTGTGCTGAAAATGCCCC+AGG | 0.539944 | 7.1:-3092865 | None:intergenic |
| AACCTAGGAAGAACAGTCCT+GGG | 0.541835 | 7.1:+3092848 | MS.gene050890:CDS |
| TTCAAATCCCTGAAATCAGA+TGG | 0.542406 | 7.1:-3093372 | None:intergenic |
| TTTAATAGGAACAGCTGCAT+GGG | 0.543232 | 7.1:-3093862 | None:intergenic |
| CTTGAATTCAGTCCTCGAAT+CGG | 0.544267 | 7.1:+3092013 | MS.gene050890:CDS |
| TCATAGAGAACAAACGGATG+GGG | 0.548246 | 7.1:+3092248 | MS.gene050890:CDS |
| AATGAGGAAGAGCCAGAAAA+GGG | 0.549935 | 7.1:+3093225 | MS.gene050890:CDS |
| GTCGACATTGTTCAGATCAT+GGG | 0.552249 | 7.1:+3094525 | MS.gene050890:CDS |
| GTAAGTATTGGCAAGGAGAA+GGG | 0.554132 | 7.1:+3092802 | MS.gene050890:CDS |
| AAAGACCAGATATTCTTTGG+AGG | 0.555308 | 7.1:-3093055 | None:intergenic |
| CGGAGTGCAGGAAATTAAAA+GGG | 0.556354 | 7.1:+3092329 | MS.gene050890:CDS |
| CATTTCTCAACTTGAACGCA+AGG | 0.556373 | 7.1:-3094140 | None:intergenic |
| CAGCCGAAATCTTCCTGTCA+AGG | 0.558912 | 7.1:-3092932 | None:intergenic |
| GGGGCTTGAGGTAACATTGA+CGG | 0.564168 | 7.1:-3093278 | None:intergenic |
| TCTGAGCAACCAATGTATCA+AGG | 0.564748 | 7.1:+3093024 | MS.gene050890:CDS |
| CTCGATTACTGGCAAGAGGT+TGG | 0.566010 | 7.1:+3092998 | MS.gene050890:CDS |
| AGACCAGCTTTCACTTCGAA+CGG | 0.567796 | 7.1:+3092078 | MS.gene050890:CDS |
| GATCCGTTCGAAGTGAAAGC+TGG | 0.567844 | 7.1:-3092081 | None:intergenic |
| TTCATAGAGAACAAACGGAT+GGG | 0.571891 | 7.1:+3092247 | MS.gene050890:CDS |
| TGGTATTCAGGACCGATTCG+AGG | 0.572296 | 7.1:-3092025 | None:intergenic |
| AATCTTCTGAAAGAAAGTAA+AGG | 0.572900 | 7.1:+3093636 | MS.gene050890:CDS |
| AAGGAATGTAAAACATAGCA+AGG | 0.573770 | 7.1:+3093470 | MS.gene050890:CDS |
| TGGCCTCGATTACTGGCAAG+AGG | 0.576092 | 7.1:+3092994 | MS.gene050890:CDS |
| TCAAAGAAGGAATTTCTGCC+TGG | 0.578058 | 7.1:-3092045 | None:intergenic |
| GAATATTCTTGAGCTTGAAG+AGG | 0.578780 | 7.1:+3093179 | MS.gene050890:CDS |
| AGGTAAAAGATCGGGGCTTG+AGG | 0.579822 | 7.1:-3093290 | None:intergenic |
| AATACTCCATGTGACTGGGA+TGG | 0.580858 | 7.1:-3092158 | None:intergenic |
| GAGATTAACTGCTTGTGTCA+AGG | 0.581897 | 7.1:+3093890 | MS.gene050890:CDS |
| ATCTGTAAATATCAAAACAA+TGG | 0.583516 | 7.1:+3094202 | MS.gene050890:CDS |
| CTAGGCTTGATGTGGAACCT+AGG | 0.584890 | 7.1:+3092833 | MS.gene050890:CDS |
| TGATAGTGATCCAAACAAGA+TGG | 0.588516 | 7.1:+3093737 | MS.gene050890:CDS |
| TGCAGCAAGGTTCATACAAG+AGG | 0.588688 | 7.1:+3094488 | MS.gene050890:intron |
| TAATTCAGTTTGTAAAGTTG+AGG | 0.590421 | 7.1:+3093407 | MS.gene050890:CDS |
| GAAAGGTGAGCATGGCCTAG+AGG | 0.593104 | 7.1:+3094238 | MS.gene050890:CDS |
| TGAACATCTTCTGAATCAGT+AGG | 0.595610 | 7.1:-3092103 | None:intergenic |
| GATACCAATGGACTTTCCGA+AGG | 0.596842 | 7.1:+3093540 | MS.gene050890:CDS |
| CTGAAGAATTCTCAGTGATG+TGG | 0.597073 | 7.1:-3093923 | None:intergenic |
| ATTCATAGAGAACAAACGGA+TGG | 0.602448 | 7.1:+3092246 | MS.gene050890:CDS |
| ACATCACAAGGTGTTCTCAA+AGG | 0.603032 | 7.1:-3094308 | None:intergenic |
| TTGACGGTCATTGATACCAA+TGG | 0.605853 | 7.1:+3093528 | MS.gene050890:CDS |
| GCGCCAGAGAAAGGTGAGCA+TGG | 0.606459 | 7.1:+3094230 | MS.gene050890:CDS |
| TGATGATTCACGAAGAATGG+TGG | 0.607579 | 7.1:+3093671 | MS.gene050890:CDS |
| GCATCTTCCAATTCAACTGA+CGG | 0.608811 | 7.1:-3093597 | None:intergenic |
| AAATATCAAAACAATGGTGA+CGG | 0.614111 | 7.1:+3094208 | MS.gene050890:CDS |
| CAGCAATACTCCATGTGACT+GGG | 0.616407 | 7.1:-3092162 | None:intergenic |
| ATAAAGGGCAAAGTTATACA+AGG | 0.618599 | 7.1:+3093451 | MS.gene050890:CDS |
| GTTTGCCCATCCCAGTCACA+TGG | 0.618676 | 7.1:+3092152 | MS.gene050890:CDS |
| TTATTGTAGGTAAAAGATCG+GGG | 0.620178 | 7.1:-3093297 | None:intergenic |
| CAACCTCTTGCCAGTAATCG+AGG | 0.623252 | 7.1:-3092997 | None:intergenic |
| TTGATGATAATCGGATGAAG+AGG | 0.623283 | 7.1:+3093793 | MS.gene050890:CDS |
| ATCACTGAGAATTCTTCAGG+AGG | 0.625006 | 7.1:+3093927 | MS.gene050890:CDS |
| AACAGCCTGATATAAATCCA+AGG | 0.626073 | 7.1:+3094345 | MS.gene050890:CDS |
| GTTTCTAAATCATATGTCGA+TGG | 0.626151 | 7.1:+3092709 | MS.gene050890:CDS |
| AGACCTTACTAGGCTTGATG+TGG | 0.628161 | 7.1:+3092825 | MS.gene050890:CDS |
| TGAGATTTGTCAGAGACATG+AGG | 0.628677 | 7.1:-3092421 | None:intergenic |
| TCCAAAGAATCAACATCACA+AGG | 0.630329 | 7.1:-3094320 | None:intergenic |
| CATAGAGAACAAACGGATGG+GGG | 0.631391 | 7.1:+3092249 | MS.gene050890:CDS |
| AAGGATTGAATTATATCACT+AGG | 0.634298 | 7.1:-3092913 | None:intergenic |
| GGAAGCAGTAAGTATTGGCA+AGG | 0.637899 | 7.1:+3092795 | MS.gene050890:CDS |
| TAAAGTTCATAGCTGCAATG+AGG | 0.642923 | 7.1:+3093209 | MS.gene050890:CDS |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.1:+3092309 | MS.gene050890:CDS |
| GAAGCTAAGATGCTGATATG+TGG | 0.648506 | 7.1:+3093693 | MS.gene050890:CDS |
| TTACACCCTCAACAGACCCA+AGG | 0.648705 | 7.1:+3094169 | MS.gene050890:CDS |
| CAGCTGTTCCTATTAAAAGG+AGG | 0.650589 | 7.1:+3093868 | MS.gene050890:CDS |
| TTCTTTAGCAGACAGAAGTG+TGG | 0.672598 | 7.1:+3094064 | MS.gene050890:CDS |
| GATGGGCAAACCTATTGCAG+AGG | 0.681836 | 7.1:-3092140 | None:intergenic |
| TAGTGATGTCTTGAACAAAG+TGG | 0.700987 | 7.1:+3093146 | MS.gene050890:CDS |
| GGTTTGGGATCAGATAAACT+GGG | 0.714357 | 7.1:+3093948 | MS.gene050890:CDS |
| ACCTAGGAAGAACAGTCCTG+GGG | 0.724587 | 7.1:+3092849 | MS.gene050890:CDS |
| CTCCTCAACTACTTCCTGAG+CGG | 0.726279 | 7.1:-3094285 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATCATATAAAATTAAT+GGG | + | chr7.1:3093318-3093337 | MS.gene050890:CDS | 10.0% |
| !! | TAAAGATCATATAAAATTAA+TGG | + | chr7.1:3093317-3093336 | MS.gene050890:CDS | 10.0% |
| !!! | TTATTTAAAAAAAAAGGTAC+TGG | - | chr7.1:3092624-3092643 | None:intergenic | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | - | chr7.1:3093313-3093332 | None:intergenic | 15.0% |
| !! | ATCTGTAAATATCAAAACAA+TGG | + | chr7.1:3094202-3094221 | MS.gene050890:CDS | 20.0% |
| !!! | GAAATACTTACATTTTACTA+TGG | + | chr7.1:3092271-3092290 | MS.gene050890:CDS | 20.0% |
| !!! | TACTAGGTTTGTTTATTTTT+GGG | + | chr7.1:3092200-3092219 | MS.gene050890:CDS | 20.0% |
| ! | AAAGATTCATAGAGAACAAA+CGG | + | chr7.1:3092242-3092261 | MS.gene050890:CDS | 25.0% |
| ! | AAAGGGAGAAAATGTATAAT+AGG | + | chr7.1:3092346-3092365 | MS.gene050890:CDS | 25.0% |
| ! | AAATATCAAAACAATGGTGA+CGG | + | chr7.1:3094208-3094227 | MS.gene050890:CDS | 25.0% |
| ! | AAGGATTGAATTATATCACT+AGG | - | chr7.1:3092916-3092935 | None:intergenic | 25.0% |
| ! | AAGGGAGAAAATGTATAATA+GGG | + | chr7.1:3092347-3092366 | MS.gene050890:CDS | 25.0% |
| ! | ACTTTACAAACTGAATTAAC+AGG | - | chr7.1:3093405-3093424 | None:intergenic | 25.0% |
| ! | CTTTATTGTAGGTAAAAGAT+CGG | - | chr7.1:3093302-3093321 | None:intergenic | 25.0% |
| ! | CTTTGCTTATATTTATACTC+AGG | + | chr7.1:3092687-3092706 | MS.gene050890:intron | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | - | chr7.1:3092685-3092704 | None:intergenic | 25.0% |
| ! | TAATTCAGTTTGTAAAGTTG+AGG | + | chr7.1:3093407-3093426 | MS.gene050890:CDS | 25.0% |
| ! | TTTATTGTAGGTAAAAGATC+GGG | - | chr7.1:3093301-3093320 | None:intergenic | 25.0% |
| !! | AATCTTCTGAAAGAAAGTAA+AGG | + | chr7.1:3093636-3093655 | MS.gene050890:CDS | 25.0% |
| !! | ATCTCAAGATACATTTTTAC+AGG | + | chr7.1:3092438-3092457 | MS.gene050890:CDS | 25.0% |
| !! | TATAATAGGGAAGAAACTTT+TGG | + | chr7.1:3092360-3092379 | MS.gene050890:CDS | 25.0% |
| !! | TTTCTTCAATAGTTTTCCTT+CGG | - | chr7.1:3093559-3093578 | None:intergenic | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+TGG | + | chr7.1:3092199-3092218 | MS.gene050890:CDS | 25.0% |
| !!! | TAAAAAAAAAGGTACTGGTA+TGG | - | chr7.1:3092619-3092638 | None:intergenic | 25.0% |
| !!! | TAATGAAAAAAGCATTCTCA+AGG | + | chr7.1:3094094-3094113 | MS.gene050890:CDS | 25.0% |
| AAGAAAGACCAGATATTCTT+TGG | - | chr7.1:3093061-3093080 | None:intergenic | 30.0% | |
| AAGGAATGTAAAACATAGCA+AGG | + | chr7.1:3093470-3093489 | MS.gene050890:CDS | 30.0% | |
| ATAAAGGGCAAAGTTATACA+AGG | + | chr7.1:3093451-3093470 | MS.gene050890:CDS | 30.0% | |
| ATCATAATCATTCTGCTCAA+AGG | - | chr7.1:3091963-3091982 | None:intergenic | 30.0% | |
| ATGTGCAAAGTAGACAAAAA+AGG | + | chr7.1:3094435-3094454 | MS.gene050890:intron | 30.0% | |
| GATATAATTCAATCCTTGAC+AGG | + | chr7.1:3092919-3092938 | MS.gene050890:CDS | 30.0% | |
| GTTACAATGGTAATTGCAAT+GGG | + | chr7.1:3092577-3092596 | MS.gene050890:intron | 30.0% | |
| GTTTCTAAATCATATGTCGA+TGG | + | chr7.1:3092709-3092728 | MS.gene050890:CDS | 30.0% | |
| TCTTATATGAAGTCTACTGT+TGG | + | chr7.1:3092757-3092776 | MS.gene050890:CDS | 30.0% | |
| TCTTCAAGCTCAAGAATATT+CGG | - | chr7.1:3093180-3093199 | None:intergenic | 30.0% | |
| TGTTACAATGGTAATTGCAA+TGG | + | chr7.1:3092576-3092595 | MS.gene050890:intron | 30.0% | |
| TTATTGTAGGTAAAAGATCG+GGG | - | chr7.1:3093300-3093319 | None:intergenic | 30.0% | |
| TTCAATCAGAGAGTAATATC+TGG | + | chr7.1:3093831-3093850 | MS.gene050890:CDS | 30.0% | |
| ! | AATTCAACTGACGGATATTT+CGG | - | chr7.1:3093591-3093610 | None:intergenic | 30.0% |
| ! | CTTCTGTGTTTGATGATAAT+CGG | + | chr7.1:3093784-3093803 | MS.gene050890:CDS | 30.0% |
| ! | GTTAATCTCCTCCTTTTAAT+AGG | - | chr7.1:3093879-3093898 | None:intergenic | 30.0% |
| ! | TAACTGAATGACAGACATTT+TGG | - | chr7.1:3094007-3094026 | None:intergenic | 30.0% |
| !!! | CAGAAGTATGTTGATTTTTC+TGG | - | chr7.1:3093770-3093789 | None:intergenic | 30.0% |
| AAAGACCAGATATTCTTTGG+AGG | - | chr7.1:3093058-3093077 | None:intergenic | 35.0% | |
| AAAGTGAGGAATGAAGCAAA+TGG | - | chr7.1:3092671-3092690 | None:intergenic | 35.0% | |
| AAATCACTTTCCTCTGCAAT+AGG | + | chr7.1:3092130-3092149 | MS.gene050890:CDS | 35.0% | |
| AACAGCCTGATATAAATCCA+AGG | + | chr7.1:3094345-3094364 | MS.gene050890:CDS | 35.0% | |
| AACTGATGATTCACGAAGAA+TGG | + | chr7.1:3093668-3093687 | MS.gene050890:CDS | 35.0% | |
| AATCCTTGACAGGAAGATTT+CGG | + | chr7.1:3092929-3092948 | MS.gene050890:CDS | 35.0% | |
| ACAGATTTCGATGAAACCTT+GGG | - | chr7.1:3094188-3094207 | None:intergenic | 35.0% | |
| ATCATTGACAGTTAGAGCAT+TGG | + | chr7.1:3094388-3094407 | MS.gene050890:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+AGG | + | chr7.1:3093865-3093884 | MS.gene050890:CDS | 35.0% | |
| ATTCATAGAGAACAAACGGA+TGG | + | chr7.1:3092246-3092265 | MS.gene050890:CDS | 35.0% | |
| CTGCTGGTGTAAAAGATAAA+GGG | + | chr7.1:3093436-3093455 | MS.gene050890:CDS | 35.0% | |
| GAAATATCCGTCAGTTGAAT+TGG | + | chr7.1:3093590-3093609 | MS.gene050890:CDS | 35.0% | |
| GAATATTCTTGAGCTTGAAG+AGG | + | chr7.1:3093179-3093198 | MS.gene050890:CDS | 35.0% | |
| GCTATGTGCATATGTTACAA+TGG | + | chr7.1:3092564-3092583 | MS.gene050890:intron | 35.0% | |
| TAAAGTTCATAGCTGCAATG+AGG | + | chr7.1:3093209-3093228 | MS.gene050890:CDS | 35.0% | |
| TACAGATTTCGATGAAACCT+TGG | - | chr7.1:3094189-3094208 | None:intergenic | 35.0% | |
| TAGTGATGTCTTGAACAAAG+TGG | + | chr7.1:3093146-3093165 | MS.gene050890:CDS | 35.0% | |
| TCCAAAGAATCAACATCACA+AGG | - | chr7.1:3094323-3094342 | None:intergenic | 35.0% | |
| TCTGATTGCTCAATCAAAGA+AGG | - | chr7.1:3092061-3092080 | None:intergenic | 35.0% | |
| TGAACATCTTCTGAATCAGT+AGG | - | chr7.1:3092106-3092125 | None:intergenic | 35.0% | |
| TGCAAAACCTTCACAAGTTA+TGG | + | chr7.1:3092515-3092534 | MS.gene050890:intron | 35.0% | |
| TGCATTGTAACATCAAACGA+AGG | - | chr7.1:3092499-3092518 | None:intergenic | 35.0% | |
| TGTCTCCTTGGATTTATATC+AGG | - | chr7.1:3094353-3094372 | None:intergenic | 35.0% | |
| TGTTACCTCCAAAGAATATC+TGG | + | chr7.1:3093050-3093069 | MS.gene050890:CDS | 35.0% | |
| TTCAAATCCCTGAAATCAGA+TGG | - | chr7.1:3093375-3093394 | None:intergenic | 35.0% | |
| TTCATAGAGAACAAACGGAT+GGG | + | chr7.1:3092247-3092266 | MS.gene050890:CDS | 35.0% | |
| TTGAATTGGAAGATGCTTCT+AGG | + | chr7.1:3093604-3093623 | MS.gene050890:CDS | 35.0% | |
| TTTAATAGGAACAGCTGCAT+GGG | - | chr7.1:3093865-3093884 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | + | chr7.1:3092305-3092324 | MS.gene050890:CDS | 35.0% |
| ! | GGAAAGTTTTACGAAACTGA+TGG | + | chr7.1:3092292-3092311 | MS.gene050890:CDS | 35.0% |
| ! | GTAACATAGCCTTGATACAT+TGG | - | chr7.1:3093036-3093055 | None:intergenic | 35.0% |
| ! | TATCTGGTCTTTCTTATTCC+TGG | + | chr7.1:3093066-3093085 | MS.gene050890:CDS | 35.0% |
| ! | TCTTCATTTGATCCCTTTTC+TGG | - | chr7.1:3093240-3093259 | None:intergenic | 35.0% |
| ! | TGATAGTGATCCAAACAAGA+TGG | + | chr7.1:3093737-3093756 | MS.gene050890:CDS | 35.0% |
| ! | TTGATGATAATCGGATGAAG+AGG | + | chr7.1:3093793-3093812 | MS.gene050890:CDS | 35.0% |
| ! | TTTTAATAGGAACAGCTGCA+TGG | - | chr7.1:3093866-3093885 | None:intergenic | 35.0% |
| !! | AATGGGTATTGATACCAGTT+TGG | + | chr7.1:3093335-3093354 | MS.gene050890:CDS | 35.0% |
| !! | ACCTTGTGATGTTGATTCTT+TGG | + | chr7.1:3094319-3094338 | MS.gene050890:CDS | 35.0% |
| !! | GACACAAATAGCTTTGTACT+AGG | + | chr7.1:3092184-3092203 | MS.gene050890:CDS | 35.0% |
| !! | TGAATGACAGACATTTTGGT+TGG | - | chr7.1:3094003-3094022 | None:intergenic | 35.0% |
| AAGGAAAGCCATCTGATTTC+AGG | + | chr7.1:3093364-3093383 | MS.gene050890:CDS | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+GGG | + | chr7.1:3093225-3093244 | MS.gene050890:CDS | 40.0% | |
| AGGAAAGCCATCTGATTTCA+GGG | + | chr7.1:3093365-3093384 | MS.gene050890:CDS | 40.0% | |
| ATCACTGAGAATTCTTCAGG+AGG | + | chr7.1:3093927-3093946 | MS.gene050890:CDS | 40.0% | |
| ATGAAGTCTACTGTTGGACT+TGG | + | chr7.1:3092763-3092782 | MS.gene050890:CDS | 40.0% | |
| CACATCACTGAGAATTCTTC+AGG | + | chr7.1:3093924-3093943 | MS.gene050890:CDS | 40.0% | |
| CAGCTGTTCCTATTAAAAGG+AGG | + | chr7.1:3093868-3093887 | MS.gene050890:CDS | 40.0% | |
| CATTTCTCAACTTGAACGCA+AGG | - | chr7.1:3094143-3094162 | None:intergenic | 40.0% | |
| CGGAGTGCAGGAAATTAAAA+GGG | + | chr7.1:3092329-3092348 | MS.gene050890:CDS | 40.0% | |
| CTGAAGAATTCTCAGTGATG+TGG | - | chr7.1:3093926-3093945 | None:intergenic | 40.0% | |
| CTTGAATTCAGTCCTCGAAT+CGG | + | chr7.1:3092013-3092032 | MS.gene050890:CDS | 40.0% | |
| CTTGTGGAAGCAGTAAGTAT+TGG | + | chr7.1:3092790-3092809 | MS.gene050890:CDS | 40.0% | |
| CTTTCCTTTATGCACCAAAC+TGG | - | chr7.1:3093352-3093371 | None:intergenic | 40.0% | |
| GAAGCTAAGATGCTGATATG+TGG | + | chr7.1:3093693-3093712 | MS.gene050890:CDS | 40.0% | |
| GACATGAATCATTTGCCTCT+AGG | - | chr7.1:3094256-3094275 | None:intergenic | 40.0% | |
| GAGAATTCTTCAGGAGGTTT+GGG | + | chr7.1:3093933-3093952 | MS.gene050890:CDS | 40.0% | |
| GAGATTAACTGCTTGTGTCA+AGG | + | chr7.1:3093890-3093909 | MS.gene050890:CDS | 40.0% | |
| GCAGAATTCGACAAAGTTGA+CGG | + | chr7.1:3093512-3093531 | MS.gene050890:CDS | 40.0% | |
| GCATCTTCCAATTCAACTGA+CGG | - | chr7.1:3093600-3093619 | None:intergenic | 40.0% | |
| GCTGCTGGTGTAAAAGATAA+AGG | + | chr7.1:3093435-3093454 | MS.gene050890:CDS | 40.0% | |
| GTCGACATTGTTCAGATCAT+GGG | + | chr7.1:3094525-3094544 | MS.gene050890:CDS | 40.0% | |
| TCAAAGAAGGAATTTCTGCC+TGG | - | chr7.1:3092048-3092067 | None:intergenic | 40.0% | |
| TCAGTTTGTAAAGTTGAGGC+AGG | + | chr7.1:3093411-3093430 | MS.gene050890:CDS | 40.0% | |
| TCATAGAGAACAAACGGATG+GGG | + | chr7.1:3092248-3092267 | MS.gene050890:CDS | 40.0% | |
| TCGAGGAGAAAACTTGTGAA+AGG | + | chr7.1:3093102-3093121 | MS.gene050890:CDS | 40.0% | |
| TCGGAGTGCAGGAAATTAAA+AGG | + | chr7.1:3092328-3092347 | MS.gene050890:CDS | 40.0% | |
| TCTGAGCAACCAATGTATCA+AGG | + | chr7.1:3093024-3093043 | MS.gene050890:CDS | 40.0% | |
| TGAGAATTCTTCAGGAGGTT+TGG | + | chr7.1:3093932-3093951 | MS.gene050890:CDS | 40.0% | |
| TGAGATTTGTCAGAGACATG+AGG | - | chr7.1:3092424-3092443 | None:intergenic | 40.0% | |
| TGATGATTCACGAAGAATGG+TGG | + | chr7.1:3093671-3093690 | MS.gene050890:CDS | 40.0% | |
| TGGCTTTCAACCATCTTGTT+TGG | - | chr7.1:3093750-3093769 | None:intergenic | 40.0% | |
| TTCTTTAGCAGACAGAAGTG+TGG | + | chr7.1:3094064-3094083 | MS.gene050890:CDS | 40.0% | |
| TTGACGGTCATTGATACCAA+TGG | + | chr7.1:3093528-3093547 | MS.gene050890:CDS | 40.0% | |
| ! | ACATCACAAGGTGTTCTCAA+AGG | - | chr7.1:3094311-3094330 | None:intergenic | 40.0% |
| ! | AGATGCTCCATAACTTGTGA+AGG | - | chr7.1:3092525-3092544 | None:intergenic | 40.0% |
| ! | AGGTTTGGGATCAGATAAAC+TGG | + | chr7.1:3093947-3093966 | MS.gene050890:CDS | 40.0% |
| ! | ATAGGGAAGAAACTTTTGGC+TGG | + | chr7.1:3092364-3092383 | MS.gene050890:CDS | 40.0% |
| ! | GGTTTGGGATCAGATAAACT+GGG | + | chr7.1:3093948-3093967 | MS.gene050890:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | + | chr7.1:3092309-3092328 | MS.gene050890:CDS | 40.0% |
| ! | TGCAAAGCTCTGTCTTCTTT+TGG | + | chr7.1:3092889-3092908 | MS.gene050890:CDS | 40.0% |
| ! | TTTTCCTTCGGAAAGTCCAT+TGG | - | chr7.1:3093547-3093566 | None:intergenic | 40.0% |
| !! | AGTAAGTATTGGCAAGGAGA+AGG | + | chr7.1:3092801-3092820 | MS.gene050890:CDS | 40.0% |
| !! | CAAAAGTGTCGATCTCTTCT+GGG | + | chr7.1:3092963-3092982 | MS.gene050890:CDS | 40.0% |
| !! | GATACCAGTTTGGTGCATAA+AGG | + | chr7.1:3093345-3093364 | MS.gene050890:CDS | 40.0% |
| !! | GTAAGTATTGGCAAGGAGAA+GGG | + | chr7.1:3092802-3092821 | MS.gene050890:CDS | 40.0% |
| AACCTAGGAAGAACAGTCCT+GGG | + | chr7.1:3092848-3092867 | MS.gene050890:CDS | 45.0% | |
| AATACTCCATGTGACTGGGA+TGG | - | chr7.1:3092161-3092180 | None:intergenic | 45.0% | |
| ACCTTGCTGCAAGGATTGAA+AGG | - | chr7.1:3094479-3094498 | None:intergenic | 45.0% | |
| AGACCAGCTTTCACTTCGAA+CGG | + | chr7.1:3092078-3092097 | MS.gene050890:CDS | 45.0% | |
| AGACCTTACTAGGCTTGATG+TGG | + | chr7.1:3092825-3092844 | MS.gene050890:CDS | 45.0% | |
| ATACTCCATGTGACTGGGAT+GGG | - | chr7.1:3092160-3092179 | None:intergenic | 45.0% | |
| ATGAAACCTTGGGTCTGTTG+AGG | - | chr7.1:3094178-3094197 | None:intergenic | 45.0% | |
| CAATGAGGAAGAGCCAGAAA+AGG | + | chr7.1:3093224-3093243 | MS.gene050890:CDS | 45.0% | |
| CAGCAATACTCCATGTGACT+GGG | - | chr7.1:3092165-3092184 | None:intergenic | 45.0% | |
| CATAGAGAACAAACGGATGG+GGG | + | chr7.1:3092249-3092268 | MS.gene050890:CDS | 45.0% | |
| CGTCGACATTGTTCAGATCA+TGG | + | chr7.1:3094524-3094543 | MS.gene050890:CDS | 45.0% | |
| CTTGTATGAACCTTGCTGCA+AGG | - | chr7.1:3094488-3094507 | None:intergenic | 45.0% | |
| GGAATTTCTGCCTGGTATTC+AGG | - | chr7.1:3092040-3092059 | None:intergenic | 45.0% | |
| GTTCCACATCAAGCCTAGTA+AGG | - | chr7.1:3092831-3092850 | None:intergenic | 45.0% | |
| TCAGCAATACTCCATGTGAC+TGG | - | chr7.1:3092166-3092185 | None:intergenic | 45.0% | |
| TCCTTTCAATCCTTGCAGCA+AGG | + | chr7.1:3094475-3094494 | MS.gene050890:intron | 45.0% | |
| TGAAACCTTGGGTCTGTTGA+GGG | - | chr7.1:3094177-3094196 | None:intergenic | 45.0% | |
| TGCAGCAAGGTTCATACAAG+AGG | + | chr7.1:3094488-3094507 | MS.gene050890:intron | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | + | chr7.1:3092974-3092993 | MS.gene050890:CDS | 45.0% |
| ! | CCAGAAGAGATCGACACTTT+TGG | - | chr7.1:3092965-3092984 | None:intergenic | 45.0% |
| ! | GATACCAATGGACTTTCCGA+AGG | + | chr7.1:3093540-3093559 | MS.gene050890:CDS | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+TGG | - | chr7.1:3094365-3094384 | None:intergenic | 45.0% |
| !! | CCAAAAGTGTCGATCTCTTC+TGG | + | chr7.1:3092962-3092981 | MS.gene050890:CDS | 45.0% |
| !! | GGAAGCAGTAAGTATTGGCA+AGG | + | chr7.1:3092795-3092814 | MS.gene050890:CDS | 45.0% |
| !! | AAAAAGTTATTTAAAAAAAA+AGG | - | chr7.1:3092630-3092649 | None:intergenic | 5.0% |
| ACCTAGGAAGAACAGTCCTG+GGG | + | chr7.1:3092849-3092868 | MS.gene050890:CDS | 50.0% | |
| AGCTGTTTGGCCTCGATTAC+TGG | + | chr7.1:3092987-3093006 | MS.gene050890:CDS | 50.0% | |
| AGGAGAAGGGAGACCTTACT+AGG | + | chr7.1:3092815-3092834 | MS.gene050890:CDS | 50.0% | |
| AGGTAAAAGATCGGGGCTTG+AGG | - | chr7.1:3093293-3093312 | None:intergenic | 50.0% | |
| CAACCTCTTGCCAGTAATCG+AGG | - | chr7.1:3093000-3093019 | None:intergenic | 50.0% | |
| CAATGGGAACCTGTGCTCTA+TGG | + | chr7.1:3092593-3092612 | MS.gene050890:intron | 50.0% | |
| CAGCCGAAATCTTCCTGTCA+AGG | - | chr7.1:3092935-3092954 | None:intergenic | 50.0% | |
| CTAGGCTTGATGTGGAACCT+AGG | + | chr7.1:3092833-3092852 | MS.gene050890:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+CGG | - | chr7.1:3094288-3094307 | None:intergenic | 50.0% | |
| CTCGAAAACTTCTCAACGCC+AGG | - | chr7.1:3093087-3093106 | None:intergenic | 50.0% | |
| CTCGATTACTGGCAAGAGGT+TGG | + | chr7.1:3092998-3093017 | MS.gene050890:CDS | 50.0% | |
| GAACCTAGGAAGAACAGTCC+TGG | + | chr7.1:3092847-3092866 | MS.gene050890:CDS | 50.0% | |
| GATCCGTTCGAAGTGAAAGC+TGG | - | chr7.1:3092084-3092103 | None:intergenic | 50.0% | |
| GATGGGCAAACCTATTGCAG+AGG | - | chr7.1:3092143-3092162 | None:intergenic | 50.0% | |
| GGGGCTTGAGGTAACATTGA+CGG | - | chr7.1:3093281-3093300 | None:intergenic | 50.0% | |
| GTTTGTGCTGAAAATGCCCC+AGG | - | chr7.1:3092868-3092887 | None:intergenic | 50.0% | |
| TATCAGCAGCAGCAGCAGAA+AGG | + | chr7.1:3094029-3094048 | MS.gene050890:CDS | 50.0% | |
| TCGAATCGGTCCTGAATACC+AGG | + | chr7.1:3092027-3092046 | MS.gene050890:CDS | 50.0% | |
| TGTTGGACTTGGCGTTCTTG+TGG | + | chr7.1:3092774-3092793 | MS.gene050890:CDS | 50.0% | |
| TTACACCCTCAACAGACCCA+AGG | + | chr7.1:3094169-3094188 | MS.gene050890:CDS | 50.0% | |
| !! | AGAAACTTTTGGCTGGAGCG+AGG | + | chr7.1:3092371-3092390 | MS.gene050890:CDS | 50.0% |
| !! | CTGGCGTTGAGAAGTTTTCG+AGG | + | chr7.1:3093085-3093104 | MS.gene050890:CDS | 50.0% |
| !! | TGGTATTCAGGACCGATTCG+AGG | - | chr7.1:3092028-3092047 | None:intergenic | 50.0% |
| AGCCGCTCAGGAAGTAGTTG+AGG | + | chr7.1:3094283-3094302 | MS.gene050890:CDS | 55.0% | |
| AGGCCATGCTCACCTTTCTC+TGG | - | chr7.1:3094236-3094255 | None:intergenic | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | + | chr7.1:3092317-3092336 | MS.gene050890:CDS | 55.0% | |
| ATGTCTAGCATCAGCCGCTC+AGG | + | chr7.1:3094271-3094290 | MS.gene050890:CDS | 55.0% | |
| CTGGTATGGCCATAGAGCAC+AGG | - | chr7.1:3092605-3092624 | None:intergenic | 55.0% | |
| GAAAGGTGAGCATGGCCTAG+AGG | + | chr7.1:3094238-3094257 | MS.gene050890:CDS | 55.0% | |
| GTTTGCCCATCCCAGTCACA+TGG | + | chr7.1:3092152-3092171 | MS.gene050890:CDS | 55.0% | |
| TGGCCTCGATTACTGGCAAG+AGG | + | chr7.1:3092994-3093013 | MS.gene050890:CDS | 55.0% | |
| ! | AAAGTTGAGGCAGGTGCTGC+TGG | + | chr7.1:3093420-3093439 | MS.gene050890:CDS | 55.0% |
| GCCCCAGGACTGTTCTTCCT+AGG | - | chr7.1:3092853-3092872 | None:intergenic | 60.0% | |
| GCGCCAGAGAAAGGTGAGCA+TGG | + | chr7.1:3094230-3094249 | MS.gene050890:CDS | 60.0% | |
| !! | ATGGTGACGGCGCCAGAGAA+AGG | + | chr7.1:3094221-3094240 | MS.gene050890:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3091953 | 3094560 | 3091953 | ID=MS.gene050890 |
| chr7.1 | mRNA | 3091953 | 3094560 | 3091953 | ID=MS.gene050890.t1;Parent=MS.gene050890 |
| chr7.1 | exon | 3091953 | 3092459 | 3091953 | ID=MS.gene050890.t1.exon1;Parent=MS.gene050890.t1 |
| chr7.1 | CDS | 3091953 | 3092459 | 3091953 | ID=cds.MS.gene050890.t1;Parent=MS.gene050890.t1 |
| chr7.1 | exon | 3092709 | 3094443 | 3092709 | ID=MS.gene050890.t1.exon2;Parent=MS.gene050890.t1 |
| chr7.1 | CDS | 3092709 | 3094443 | 3092709 | ID=cds.MS.gene050890.t1;Parent=MS.gene050890.t1 |
| chr7.1 | exon | 3094493 | 3094560 | 3094493 | ID=MS.gene050890.t1.exon3;Parent=MS.gene050890.t1 |
| chr7.1 | CDS | 3094493 | 3094560 | 3094493 | ID=cds.MS.gene050890.t1;Parent=MS.gene050890.t1 |
| Gene Sequence |
| Protein sequence |
