Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072485.t1 | XP_024627185.1 | 92.3 | 753 | 56 | 1 | 1 | 751 | 1 | 753 | 0.00E+00 | 1356.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072485.t1 | G7KYL3 | 92.3 | 753 | 56 | 1 | 1 | 751 | 1 | 753 | 0.0e+00 | 1356.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene053360 | MS.gene072485 | PPI |
| MS.gene072485 | MS.gene050892 | PPI |
| MS.gene054416 | MS.gene072485 | PPI |
| MS.gene072484 | MS.gene072485 | PPI |
| MS.gene050891 | MS.gene072485 | PPI |
| MS.gene072485 | MS.gene072482 | PPI |
| MS.gene67159 | MS.gene072485 | PPI |
| MS.gene050889 | MS.gene072485 | PPI |
| MS.gene072482 | MS.gene072485 | PPI |
| MS.gene072481 | MS.gene072485 | PPI |
| MS.gene072542 | MS.gene072485 | PPI |
| MS.gene050890 | MS.gene072485 | PPI |
| MS.gene78588 | MS.gene072485 | PPI |
| MS.gene072483 | MS.gene072485 | PPI |
| MS.gene29350 | MS.gene072485 | PPI |
| MS.gene072485 | MS.gene050891 | PPI |
| MS.gene78584 | MS.gene072485 | PPI |
| MS.gene29352 | MS.gene072485 | PPI |
| MS.gene050738 | MS.gene072485 | PPI |
| MS.gene063225 | MS.gene072485 | PPI |
| MS.gene072485 | MS.gene78586 | PPI |
| MS.gene050892 | MS.gene072485 | PPI |
| MS.gene78586 | MS.gene072485 | PPI |
| MS.gene65461 | MS.gene072485 | PPI |
| MS.gene78587 | MS.gene072485 | PPI |
| MS.gene050893 | MS.gene072485 | PPI |
| MS.gene29351 | MS.gene072485 | PPI |
| MS.gene050942 | MS.gene072485 | PPI |
| MS.gene78585 | MS.gene072485 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072485.t1 | MTR_7g113220 | 92.297 | 753 | 56 | 1 | 1 | 751 | 1 | 753 | 0.0 | 1368 |
| MS.gene072485.t1 | MTR_7g113270 | 88.189 | 762 | 74 | 3 | 1 | 751 | 1 | 757 | 0.0 | 1306 |
| MS.gene072485.t1 | MTR_1g041895 | 67.611 | 812 | 199 | 11 | 1 | 751 | 1 | 809 | 0.0 | 1012 |
| MS.gene072485.t1 | MTR_7g113280 | 67.857 | 756 | 218 | 8 | 1 | 735 | 1 | 752 | 0.0 | 975 |
| MS.gene072485.t1 | MTR_7g113250 | 75.520 | 433 | 95 | 3 | 13 | 434 | 1 | 433 | 0.0 | 649 |
| MS.gene072485.t1 | MTR_7g113250 | 70.115 | 174 | 51 | 1 | 576 | 748 | 436 | 609 | 5.95e-71 | 244 |
| MS.gene072485.t1 | MTR_7g112390 | 61.404 | 456 | 103 | 6 | 105 | 555 | 1 | 388 | 2.52e-158 | 476 |
| MS.gene072485.t1 | MTR_7g112390 | 61.739 | 230 | 47 | 5 | 529 | 751 | 479 | 674 | 2.61e-68 | 239 |
| MS.gene072485.t1 | MTR_7g108470 | 48.387 | 341 | 170 | 3 | 64 | 399 | 136 | 475 | 5.12e-98 | 324 |
| MS.gene072485.t1 | MTR_4g119630 | 42.980 | 349 | 158 | 6 | 20 | 330 | 38 | 383 | 1.26e-84 | 276 |
| MS.gene072485.t1 | MTR_3g049350 | 73.964 | 169 | 34 | 2 | 276 | 434 | 3 | 171 | 1.58e-72 | 237 |
| MS.gene072485.t1 | MTR_3g049350 | 65.333 | 75 | 25 | 1 | 576 | 649 | 174 | 248 | 6.59e-22 | 96.7 |
| MS.gene072485.t1 | MTR_2g436970 | 39.936 | 313 | 170 | 11 | 26 | 335 | 17 | 314 | 1.20e-60 | 211 |
| MS.gene072485.t1 | MTR_7g113290 | 67.568 | 111 | 30 | 2 | 522 | 626 | 17 | 127 | 2.95e-36 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072485.t1 | AT1G09040 | 35.694 | 720 | 365 | 21 | 65 | 732 | 137 | 810 | 1.50e-104 | 341 |
| MS.gene072485.t1 | AT1G09050 | 35.253 | 712 | 372 | 21 | 71 | 732 | 143 | 815 | 1.72e-99 | 328 |
| MS.gene072485.t1 | AT1G09050 | 35.253 | 712 | 372 | 21 | 71 | 732 | 143 | 815 | 1.72e-99 | 328 |
| MS.gene072485.t1 | AT2G47820 | 45.133 | 339 | 171 | 7 | 74 | 402 | 152 | 485 | 8.46e-86 | 288 |
| MS.gene072485.t1 | AT2G47820 | 45.133 | 339 | 171 | 7 | 74 | 402 | 152 | 485 | 8.46e-86 | 288 |
| MS.gene072485.t1 | AT1G55050 | 38.864 | 440 | 194 | 9 | 19 | 396 | 20 | 446 | 8.50e-83 | 283 |
| MS.gene072485.t1 | AT1G55050 | 38.864 | 440 | 194 | 9 | 19 | 396 | 20 | 446 | 8.50e-83 | 283 |
Find 160 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGATGATTTCTGTTTAA+TGG | 0.114639 | 7.3:+3677224 | None:intergenic |
| ACAGATTTCAAACTCATTTA+TGG | 0.147220 | 7.3:-3677991 | MS.gene072485:intron |
| GTGGAAAGTCATCTGCTTTA+AGG | 0.169329 | 7.3:-3677338 | MS.gene072485:CDS |
| TGAAAATATCATTATAATTC+TGG | 0.213867 | 7.3:+3679144 | None:intergenic |
| TAACTGGACCACAAACATTT+TGG | 0.226397 | 7.3:+3676734 | None:intergenic |
| CTTTAGGCCTTGCTCATCTT+TGG | 0.228744 | 7.3:+3676516 | None:intergenic |
| CCCTTGCGATGTTGGTTCTT+TGG | 0.238317 | 7.3:-3676434 | MS.gene072485:CDS |
| CCAAAAGTAATGATCTCTTC+TGG | 0.256574 | 7.3:-3677740 | MS.gene072485:CDS |
| TGTTACCTCCAATGATTATC+TGG | 0.258416 | 7.3:-3677652 | MS.gene072485:CDS |
| TTCAATATTTGACAGGATTT+CGG | 0.272657 | 7.3:-3677773 | MS.gene072485:CDS |
| CGGATTGTTGAGAATTCTTC+AGG | 0.282246 | 7.3:-3676799 | MS.gene072485:CDS |
| AGCTGTTTGGCCCCGCTTAC+TGG | 0.290051 | 7.3:-3677715 | MS.gene072485:CDS |
| GAGAATTCTTCAGGATGTTT+AGG | 0.290551 | 7.3:-3676790 | MS.gene072485:CDS |
| ATCATTATAATTCTGGTTAT+AGG | 0.291827 | 7.3:+3679151 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.309396 | 7.3:-3677810 | MS.gene072485:CDS |
| TCATTCTGCTGATGACTAAC+TGG | 0.315071 | 7.3:+3676718 | None:intergenic |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.3:-3677728 | MS.gene072485:CDS |
| GTTGCCTCGGTCCGGCAAAA+AGG | 0.319814 | 7.3:+3678736 | None:intergenic |
| ATGCAGCCGTTCCTATTAAA+AGG | 0.322696 | 7.3:-3676858 | MS.gene072485:CDS |
| CCAGAAGAGATCATTACTTT+TGG | 0.323183 | 7.3:+3677740 | None:intergenic |
| CCTATTCGAGGACTGAATTC+AGG | 0.324603 | 7.3:+3679098 | None:intergenic |
| CGATTATTATCAAGATTATC+AGG | 0.334671 | 7.3:+3676940 | None:intergenic |
| ACTTTAGGTACCGAATTAAC+AGG | 0.355817 | 7.3:+3677300 | None:intergenic |
| TCAAAATCTACCTCAACTTT+AGG | 0.361337 | 7.3:+3677285 | None:intergenic |
| GAAATCTGTACCTGTTAATT+CGG | 0.363085 | 7.3:-3677310 | MS.gene072485:CDS |
| TCTTTGAGCACGAGAATATT+CGG | 0.364431 | 7.3:+3677525 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.371834 | 7.3:-3677367 | MS.gene072485:CDS |
| CTCATTGCAGCTACCAACTT+TGG | 0.379784 | 7.3:+3677494 | None:intergenic |
| TGTCTCCTCGGATTCATATC+AGG | 0.382635 | 7.3:+3676403 | None:intergenic |
| AATGAGGAAGAGCTAGAAAA+TGG | 0.383226 | 7.3:-3677477 | MS.gene072485:CDS |
| TGAAAGGATCTTGGTGTGTC+TGG | 0.390334 | 7.3:+3676287 | None:intergenic |
| TTGAAGTCTACTGTTGGATT+CGG | 0.395238 | 7.3:-3677933 | MS.gene072485:CDS |
| TGGAAAGTCATCTGCTTTAA+GGG | 0.396000 | 7.3:-3677337 | MS.gene072485:CDS |
| ATGTCTAACATCTGCTTCTC+AGG | 0.403324 | 7.3:-3676482 | MS.gene072485:CDS |
| ACCAGGCTTGGCATGGAACC+TGG | 0.404253 | 7.3:-3677864 | MS.gene072485:CDS |
| TAAACATCATATCAAATTCA+TGG | 0.414091 | 7.3:-3677385 | MS.gene072485:CDS |
| AAAGGGAGAAAATGTATGAT+AGG | 0.419409 | 7.3:-3678765 | MS.gene072485:CDS |
| GATTCATTCTAAGCGAAATC+TGG | 0.424542 | 7.3:+3679030 | None:intergenic |
| TGGTCTTCCGAGAGAAAGTA+AGG | 0.433005 | 7.3:-3677091 | MS.gene072485:CDS |
| CTTTCCACCATGCACCAAAC+TGG | 0.434787 | 7.3:+3677353 | None:intergenic |
| CAAAAGTAATGATCTCTTCT+GGG | 0.437354 | 7.3:-3677739 | MS.gene072485:CDS |
| CACTAACAGAATCAAAATAA+TGG | 0.438290 | 7.3:+3677574 | None:intergenic |
| TCTGTCTCTTTGGCACATGC+AGG | 0.442198 | 7.3:+3676323 | None:intergenic |
| TTGAGAATCCCTTGCGATGT+TGG | 0.445587 | 7.3:-3676442 | MS.gene072485:CDS |
| GAAGCATCTTCTAATTCAAC+TGG | 0.445905 | 7.3:+3677126 | None:intergenic |
| ATCATTAACTGTTAGAGCAT+TGG | 0.448693 | 7.3:-3676365 | MS.gene072485:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.3:+3677669 | None:intergenic |
| TTTACTGTAAGTAGAAGATC+GGG | 0.453964 | 7.3:+3677404 | None:intergenic |
| AAGAATATCAATAAAACTGA+TGG | 0.458430 | 7.3:-3677006 | MS.gene072485:CDS |
| CCTGAATTCAGTCCTCGAAT+AGG | 0.459025 | 7.3:-3679098 | MS.gene072485:CDS |
| AGAAGTGTGGAAGAGGATGA+TGG | 0.459059 | 7.3:-3676673 | MS.gene072485:CDS |
| GAGATAATTCAATATTTGAC+AGG | 0.461702 | 7.3:-3677780 | MS.gene072485:CDS |
| CCCAGGTTCCATGCCAAGCC+TGG | 0.465012 | 7.3:+3677863 | None:intergenic |
| TGTTGGATTCGGCGTACTTG+TGG | 0.471367 | 7.3:-3677922 | MS.gene072485:CDS |
| CCAACCTCTTGCCAGTAAGC+GGG | 0.472085 | 7.3:+3677704 | None:intergenic |
| AGCAGACAGAAGTGTGGAAG+AGG | 0.472115 | 7.3:-3676680 | MS.gene072485:CDS |
| CAGGATGTTTAGGATTCTCT+CGG | 0.472696 | 7.3:-3676780 | MS.gene072485:CDS |
| ATCGTAGATGGTCGAAGTGC+AGG | 0.473282 | 7.3:-3678794 | MS.gene072485:CDS |
| GCCAACCTCTTGCCAGTAAG+CGG | 0.473500 | 7.3:+3677703 | None:intergenic |
| GAGGGCAGAACTTCTCTAGA+AGG | 0.475221 | 7.3:-3677969 | MS.gene072485:CDS |
| TTCATGGACCTTGCGTCTGA+TGG | 0.476929 | 7.3:-3679125 | MS.gene072485:CDS |
| AACGATTCATCGAGAACAAA+GGG | 0.478405 | 7.3:-3678869 | MS.gene072485:CDS |
| AGGAGAAGGGAGACCTTACC+AGG | 0.478906 | 7.3:-3677881 | MS.gene072485:CDS |
| GATGCAAACCAAAATGTTTG+TGG | 0.482630 | 7.3:-3676742 | MS.gene072485:CDS |
| CTTGTGGAAGCTGTAGGTAT+TGG | 0.483654 | 7.3:-3677906 | MS.gene072485:CDS |
| GAATCCAACAGTAGACTTCA+AGG | 0.489122 | 7.3:+3677935 | None:intergenic |
| AAAGCTTTGCAAGCTGGTGT+TGG | 0.490050 | 7.3:+3677822 | None:intergenic |
| AACGCTTGAACGTCCTTCCC+AGG | 0.490084 | 7.3:+3677846 | None:intergenic |
| TAGTTCATGTTGCCTCGGTC+CGG | 0.493742 | 7.3:+3678728 | None:intergenic |
| GATACCAATAGACTTTCTAA+AGG | 0.496879 | 7.3:-3677189 | MS.gene072485:CDS |
| AGCAAGGAATGAAAGGATCT+TGG | 0.497674 | 7.3:+3676278 | None:intergenic |
| TCATAAAACATCAACTCAAT+CGG | 0.499106 | 7.3:-3676906 | MS.gene072485:CDS |
| TTTCTAGAGCTCTGTCTCCT+CGG | 0.499320 | 7.3:+3676391 | None:intergenic |
| AATATTCTCGTGCTCAAAGA+AGG | 0.500036 | 7.3:-3677522 | MS.gene072485:CDS |
| GAAGACAAAGCTTTGCAAGC+TGG | 0.500111 | 7.3:+3677816 | None:intergenic |
| CAAAGATGAGCAAGGCCTAA+AGG | 0.500939 | 7.3:-3676515 | MS.gene072485:CDS |
| CTGAAGAATTCTCAACAATC+CGG | 0.501236 | 7.3:+3676800 | None:intergenic |
| TGTAGGTATTGGTAAGGAGA+AGG | 0.501342 | 7.3:-3677895 | MS.gene072485:CDS |
| TTAACATCTTCTGAATCAGC+AGG | 0.504806 | 7.3:+3679008 | None:intergenic |
| TCTTCCTTGAAGTCTACTGT+TGG | 0.506496 | 7.3:-3677939 | MS.gene072485:CDS |
| CTCAATCGGAGAGCAAGATC+AGG | 0.506705 | 7.3:-3676892 | MS.gene072485:CDS |
| ATCTCAAAATGCTCTGTCAC+AGG | 0.509630 | 7.3:-3678673 | MS.gene072485:intron |
| CCCGCTTACTGGCAAGAGGT+TGG | 0.511676 | 7.3:-3677704 | MS.gene072485:CDS |
| GTAGGTATTGGTAAGGAGAA+GGG | 0.518232 | 7.3:-3677894 | MS.gene072485:CDS |
| GTTTACTGTAAGTAGAAGAT+CGG | 0.518897 | 7.3:+3677403 | None:intergenic |
| TCCTTTCATTCCTTGCTGCA+AGG | 0.521926 | 7.3:-3676272 | MS.gene072485:CDS |
| TCGAATAGGTCATGCATACC+AGG | 0.522827 | 7.3:-3679084 | MS.gene072485:CDS |
| CTATTCGAGGACTGAATTCA+GGG | 0.522868 | 7.3:+3679099 | None:intergenic |
| CTTGAAAACTTCTCAACACC+GGG | 0.523734 | 7.3:+3677618 | None:intergenic |
| GCTTGGCATGGAACCTGGGA+AGG | 0.523977 | 7.3:-3677859 | MS.gene072485:CDS |
| AAGGGAGACCTTACCAGGCT+TGG | 0.525550 | 7.3:-3677876 | MS.gene072485:CDS |
| AAACTGATGGATATCGTAGA+TGG | 0.528556 | 7.3:-3678806 | MS.gene072485:CDS |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.3:-3677600 | MS.gene072485:CDS |
| TTTCACCTTCAAAATACCTC+AGG | 0.530787 | 7.3:-3676581 | MS.gene072485:CDS |
| CGAGGAAGGTGGAAGCTAAG+AGG | 0.536516 | 7.3:-3677044 | MS.gene072485:CDS |
| TTCATCGAGAACAAAGGGAT+GGG | 0.536748 | 7.3:-3678864 | MS.gene072485:CDS |
| CAGGAAGGTAAACCATAGAA+AGG | 0.539074 | 7.3:-3677259 | MS.gene072485:CDS |
| ATTGATACCAGTTTGGTGCA+TGG | 0.543194 | 7.3:-3677360 | MS.gene072485:CDS |
| GAGCCACCCTTACTTTCTCT+CGG | 0.544937 | 7.3:+3677084 | None:intergenic |
| GTTCCATGCCAAGCCTGGTA+AGG | 0.545240 | 7.3:+3677868 | None:intergenic |
| GTGCCAAATCAGAGAAAAGC+CGG | 0.546346 | 7.3:-3676819 | MS.gene072485:CDS |
| GCCTTGCAGCAAGGAATGAA+AGG | 0.550996 | 7.3:+3676271 | None:intergenic |
| AAAGAAGGAGAAGCCAAAGT+TGG | 0.552368 | 7.3:-3677507 | MS.gene072485:CDS |
| CCAGGCTTGGCATGGAACCT+GGG | 0.556437 | 7.3:-3677863 | MS.gene072485:CDS |
| GACAATAGTTCATGTTGCCT+CGG | 0.558165 | 7.3:+3678723 | None:intergenic |
| AATTGATGATTCAGCGAGGA+AGG | 0.558519 | 7.3:-3677058 | MS.gene072485:CDS |
| TGGCCCCGCTTACTGGCAAG+AGG | 0.562669 | 7.3:-3677708 | MS.gene072485:CDS |
| TCCAAAGAACCAACATCGCA+AGG | 0.564093 | 7.3:+3676433 | None:intergenic |
| CCTTGAAAACTTCTCAACAC+CGG | 0.567703 | 7.3:+3677617 | None:intergenic |
| GGAAGCTGTAGGTATTGGTA+AGG | 0.569902 | 7.3:-3677901 | MS.gene072485:CDS |
| TGGTATGCATGACCTATTCG+AGG | 0.570623 | 7.3:+3679086 | None:intergenic |
| ATCACTCCATGTGTCTGACA+TGG | 0.571306 | 7.3:+3678953 | None:intergenic |
| GATGCTTCTACGATGACTAC+TGG | 0.571992 | 7.3:-3677111 | MS.gene072485:CDS |
| AGAATATCAATAAAACTGAT+GGG | 0.576074 | 7.3:-3677005 | MS.gene072485:CDS |
| GATTTCAAACTCATTTATGG+AGG | 0.576306 | 7.3:-3677988 | MS.gene072485:CDS |
| ATCGGGGCTTGAGGTAACAT+TGG | 0.580406 | 7.3:+3677421 | None:intergenic |
| ACATGGGTAAATCAATTGCA+AGG | 0.580943 | 7.3:+3678970 | None:intergenic |
| AAATATTGAATTATCTCACT+AGG | 0.581479 | 7.3:+3677786 | None:intergenic |
| AAATAGCAAAACAGTGGCAA+TGG | 0.582256 | 7.3:-3676542 | MS.gene072485:CDS |
| AGACCTTACCAGGCTTGGCA+TGG | 0.583144 | 7.3:-3677871 | MS.gene072485:CDS |
| TGCTGCAAGGCTCGTACATG+AGG | 0.587898 | 7.3:-3676259 | None:intergenic |
| GAAGGTGGAAGCTAAGAGGC+TGG | 0.588548 | 7.3:-3677040 | MS.gene072485:CDS |
| TCACAGAAGGAATTTCCGCC+TGG | 0.588830 | 7.3:+3679066 | None:intergenic |
| AAACGATTCATCGAGAACAA+AGG | 0.592118 | 7.3:-3678870 | MS.gene072485:CDS |
| AAGTAGAAGATCGGGGCTTG+AGG | 0.596284 | 7.3:+3677412 | None:intergenic |
| TGAGATTCTTCAGAGACATG+AGG | 0.601689 | 7.3:+3678690 | None:intergenic |
| CAACCTCTTGCCAGTAAGCG+GGG | 0.601857 | 7.3:+3677705 | None:intergenic |
| TCATCGAGAACAAAGGGATG+GGG | 0.604030 | 7.3:-3678863 | MS.gene072485:CDS |
| ATTCATCGAGAACAAAGGGA+TGG | 0.604530 | 7.3:-3678865 | MS.gene072485:CDS |
| TGATGATTCAGCGAGGAAGG+TGG | 0.617263 | 7.3:-3677055 | MS.gene072485:CDS |
| TCTGATTTCGCAATCACAGA+AGG | 0.618033 | 7.3:+3679053 | None:intergenic |
| ATTTCAAACTCATTTATGGA+GGG | 0.618189 | 7.3:-3677987 | MS.gene072485:CDS |
| CAGGGTCTCCATCAGACGCA+AGG | 0.618276 | 7.3:+3679117 | None:intergenic |
| CATGTACGAGCCTTGCAGCA+AGG | 0.618706 | 7.3:+3676262 | None:intergenic |
| TAATTCGGTACCTAAAGTTG+AGG | 0.619420 | 7.3:-3677295 | MS.gene072485:CDS |
| TGAGAAGCAGATGTTAGACA+TGG | 0.623383 | 7.3:+3676484 | None:intergenic |
| ATTTACCCATGTCAGACACA+TGG | 0.629487 | 7.3:-3678959 | MS.gene072485:CDS |
| ACATCGCAAGGGATTCTCAA+AGG | 0.629989 | 7.3:+3676445 | None:intergenic |
| TCAGACTTCGATGGTACCTG+AGG | 0.633461 | 7.3:+3676565 | None:intergenic |
| GGCGTACTTGTGGAAGCTGT+AGG | 0.638020 | 7.3:-3677912 | MS.gene072485:CDS |
| CATGGGTAAATCAATTGCAA+GGG | 0.639589 | 7.3:+3678971 | None:intergenic |
| AAATGAAGATGATCTGTCTG+AGG | 0.639665 | 7.3:-3677451 | MS.gene072485:CDS |
| CCAAAGAACCAACATCGCAA+GGG | 0.641761 | 7.3:+3676434 | None:intergenic |
| TCACTCCATGTGTCTGACAT+GGG | 0.643411 | 7.3:+3678954 | None:intergenic |
| CAAAGTTGGTAGCTGCAATG+AGG | 0.643587 | 7.3:-3677493 | MS.gene072485:CDS |
| ATGGCAGCCAAAGATGAGCA+AGG | 0.645766 | 7.3:-3676523 | MS.gene072485:CDS |
| CAGCCGTTCCTATTAAAAGG+AGG | 0.657310 | 7.3:-3676855 | MS.gene072485:CDS |
| AACAGCCTGATATGAATCCG+AGG | 0.663816 | 7.3:-3676408 | MS.gene072485:CDS |
| TTCTTCAGCAGACAGAAGTG+TGG | 0.665376 | 7.3:-3676686 | MS.gene072485:CDS |
| TGCAGTGGTGTATCTAACAG+TGG | 0.666374 | 7.3:-3676982 | MS.gene072485:CDS |
| GTCTGAAAATAGCAAAACAG+TGG | 0.675882 | 7.3:-3676548 | MS.gene072485:CDS |
| GGTCTTCCGAGAGAAAGTAA+GGG | 0.678263 | 7.3:-3677090 | MS.gene072485:CDS |
| CTTCCGAGAGAAAGTAAGGG+TGG | 0.678655 | 7.3:-3677087 | MS.gene072485:CDS |
| AATAAAACTGATGGGTGCAG+TGG | 0.689182 | 7.3:-3676997 | MS.gene072485:CDS |
| GATACCAGTTTGGTGCATGG+TGG | 0.695831 | 7.3:-3677357 | MS.gene072485:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.3:-3677678 | MS.gene072485:CDS |
| AATAGGTCATGCATACCAGG+CGG | 0.749167 | 7.3:-3679081 | MS.gene072485:CDS |
| TTACTGTAAGTAGAAGATCG+GGG | 0.758080 | 7.3:+3677405 | None:intergenic |
| TTGATAATAATCGATTAACG+AGG | 0.768384 | 7.3:-3676930 | MS.gene072485:CDS |
| CTACAATTGATGATTCAGCG+AGG | 0.781263 | 7.3:-3677062 | MS.gene072485:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAACTTCAAATAATTA+TGG | + | chr7.3:3677323-3677342 | None:intergenic | 15.0% |
| !! | TGAAAATATCATTATAATTC+TGG | + | chr7.3:3676278-3676297 | None:intergenic | 15.0% |
| !!! | AAAATACTTTCATTTTACTA+TGG | - | chr7.3:3676579-3676598 | MS.gene072485:CDS | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.3:3676278-3676297 | MS.gene072485:CDS | 15.0% |
| !! | AAATATTGAATTATCTCACT+AGG | + | chr7.3:3677636-3677655 | None:intergenic | 20.0% |
| !! | AAGAATATCAATAAAACTGA+TGG | - | chr7.3:3678413-3678432 | MS.gene072485:intron | 20.0% |
| !! | ACAAATGATATATATCTAAC+TGG | + | chr7.3:3677379-3677398 | None:intergenic | 20.0% |
| !! | AGAATATCAATAAAACTGAT+GGG | - | chr7.3:3678414-3678433 | MS.gene072485:intron | 20.0% |
| !! | TAAACATCATATCAAATTCA+TGG | - | chr7.3:3678034-3678053 | MS.gene072485:intron | 20.0% |
| !!! | ATCATTATAATTCTGGTTAT+AGG | + | chr7.3:3676271-3676290 | None:intergenic | 20.0% |
| !!! | ATTTAAAGAAAAAAAGGTAC+AGG | + | chr7.3:3677352-3677371 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAACAGTAATC+TGG | - | chr7.3:3677034-3677053 | MS.gene072485:CDS | 20.0% |
| !!! | TACTAGGTTTGTTTATTTTT+GGG | - | chr7.3:3676508-3676527 | MS.gene072485:CDS | 20.0% |
| ! | AAGAAAAACCAGATAATCAT+TGG | + | chr7.3:3677778-3677797 | None:intergenic | 25.0% |
| ! | ACAGATTTCAAACTCATTTA+TGG | - | chr7.3:3677428-3677447 | MS.gene072485:CDS | 25.0% |
| ! | ATGCATTTCATTAACAATAG+AGG | + | chr7.3:3676801-3676820 | None:intergenic | 25.0% |
| ! | ATTTCAAACTCATTTATGGA+GGG | - | chr7.3:3677432-3677451 | MS.gene072485:CDS | 25.0% |
| ! | CACTAACAGAATCAAAATAA+TGG | + | chr7.3:3677848-3677867 | None:intergenic | 25.0% |
| ! | CGATTATTATCAAGATTATC+AGG | + | chr7.3:3678482-3678501 | None:intergenic | 25.0% |
| ! | GAGATAATTCAATATTTGAC+AGG | - | chr7.3:3677639-3677658 | MS.gene072485:CDS | 25.0% |
| ! | GGAGTGATTTAAAGAAAAAA+AGG | + | chr7.3:3677358-3677377 | None:intergenic | 25.0% |
| ! | GTAAAAAAATACAAGTCACA+AGG | - | chr7.3:3677119-3677138 | MS.gene072485:CDS | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | + | chr7.3:3677408-3677427 | None:intergenic | 25.0% |
| ! | TCATAAAACATCAACTCAAT+CGG | - | chr7.3:3678513-3678532 | MS.gene072485:intron | 25.0% |
| ! | TGTCCTACATGTATAATAAT+TGG | - | chr7.3:3677066-3677085 | MS.gene072485:CDS | 25.0% |
| ! | TTCAATATTTGACAGGATTT+CGG | - | chr7.3:3677646-3677665 | MS.gene072485:CDS | 25.0% |
| !! | AAATTTGAAACCACTAAATG+TGG | + | chr7.3:3676867-3676886 | None:intergenic | 25.0% |
| !! | AAGGCGATATTTAAAATTAC+AGG | + | chr7.3:3676968-3676987 | None:intergenic | 25.0% |
| !! | AGGCGATATTTAAAATTACA+GGG | + | chr7.3:3676967-3676986 | None:intergenic | 25.0% |
| !! | CTTTGATGATTTCTGTTTAA+TGG | + | chr7.3:3678198-3678217 | None:intergenic | 25.0% |
| !! | GATTTCTGTTTAATGGTTTT+AGG | + | chr7.3:3678191-3678210 | None:intergenic | 25.0% |
| !! | TTGATAATAATCGATTAACG+AGG | - | chr7.3:3678489-3678508 | MS.gene072485:intron | 25.0% |
| !!! | GATACAAATAGTTTTGTACT+AGG | - | chr7.3:3676492-3676511 | MS.gene072485:CDS | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+TGG | - | chr7.3:3676507-3676526 | MS.gene072485:CDS | 25.0% |
| !!! | GTGACTTGTATTTTTTTACA+TGG | + | chr7.3:3677118-3677137 | None:intergenic | 25.0% |
| !!! | TTTTCCTTTAGAAAGTCTAT+TGG | + | chr7.3:3678237-3678256 | None:intergenic | 25.0% |
| AAAAACCAGATAATCATTGG+AGG | + | chr7.3:3677775-3677794 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+AGG | - | chr7.3:3676654-3676673 | MS.gene072485:CDS | 30.0% | |
| AATATTACCACATTTCGAGA+AGG | + | chr7.3:3677000-3677019 | None:intergenic | 30.0% | |
| ACTAGCAAAGAAATTCACAT+TGG | + | chr7.3:3676927-3676946 | None:intergenic | 30.0% | |
| ATCATTAACTGTTAGAGCAT+TGG | - | chr7.3:3679054-3679073 | MS.gene072485:CDS | 30.0% | |
| CAAAAGTAATGATCTCTTCT+GGG | - | chr7.3:3677680-3677699 | MS.gene072485:CDS | 30.0% | |
| CAGCCAATTATTATACATGT+AGG | + | chr7.3:3677072-3677091 | None:intergenic | 30.0% | |
| GAAATCTGTACCTGTTAATT+CGG | - | chr7.3:3678109-3678128 | MS.gene072485:intron | 30.0% | |
| GATACCAATAGACTTTCTAA+AGG | - | chr7.3:3678230-3678249 | MS.gene072485:intron | 30.0% | |
| GATTTCAAACTCATTTATGG+AGG | - | chr7.3:3677431-3677450 | MS.gene072485:CDS | 30.0% | |
| GCAGTAAATAATAATTCGCT+CGG | + | chr7.3:3677294-3677313 | None:intergenic | 30.0% | |
| GTTAGTAAATCCGCAAAATA+TGG | + | chr7.3:3677096-3677115 | None:intergenic | 30.0% | |
| GTTTACTGTAAGTAGAAGAT+CGG | + | chr7.3:3678019-3678038 | None:intergenic | 30.0% | |
| TAGTTACAGTGTAATTACGA+TGG | - | chr7.3:3677263-3677282 | MS.gene072485:CDS | 30.0% | |
| TCAAAATCTACCTCAACTTT+AGG | + | chr7.3:3678137-3678156 | None:intergenic | 30.0% | |
| TTCATTAACAATAGAGGAGA+TGG | + | chr7.3:3676795-3676814 | None:intergenic | 30.0% | |
| TTTACTGTAAGTAGAAGATC+GGG | + | chr7.3:3678018-3678037 | None:intergenic | 30.0% | |
| TTTGTAACATTGAATTGCCT+AGG | + | chr7.3:3677179-3677198 | None:intergenic | 30.0% | |
| ! | AAGAAAAAAAGGTACAGGTA+TGG | + | chr7.3:3677347-3677366 | None:intergenic | 30.0% |
| ! | GGAACATTTTACAAAACTGA+TGG | - | chr7.3:3676600-3676619 | MS.gene072485:CDS | 30.0% |
| ! | GTCAATTTCCTCCTTTTAAT+AGG | + | chr7.3:3678575-3678594 | None:intergenic | 30.0% |
| ! | TAACAGTAATCTGGTTTATG+TGG | - | chr7.3:3677043-3677062 | MS.gene072485:CDS | 30.0% |
| ! | TCTTTCTTTTTCTGTCTCTT+TGG | + | chr7.3:3679109-3679128 | None:intergenic | 30.0% |
| ! | TTTCCTCCTTTTAATAGGAA+CGG | + | chr7.3:3678570-3678589 | None:intergenic | 30.0% |
| !!! | ATTATCAGGTGCTTTTTTAC+TGG | + | chr7.3:3678468-3678487 | None:intergenic | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+CGG | - | chr7.3:3677783-3677802 | MS.gene072485:CDS | 30.0% |
| AAACGATTCATCGAGAACAA+AGG | - | chr7.3:3676549-3676568 | MS.gene072485:CDS | 35.0% | |
| AAATAGCAAAACAGTGGCAA+TGG | - | chr7.3:3678877-3678896 | MS.gene072485:CDS | 35.0% | |
| AAATGAAGATGATCTGTCTG+AGG | - | chr7.3:3677968-3677987 | MS.gene072485:CDS | 35.0% | |
| AACGATTCATCGAGAACAAA+GGG | - | chr7.3:3676550-3676569 | MS.gene072485:CDS | 35.0% | |
| AATATTCTCGTGCTCAAAGA+AGG | - | chr7.3:3677897-3677916 | MS.gene072485:CDS | 35.0% | |
| AATGAGGAAGAGCTAGAAAA+TGG | - | chr7.3:3677942-3677961 | MS.gene072485:CDS | 35.0% | |
| ACATGGGTAAATCAATTGCA+AGG | + | chr7.3:3676452-3676471 | None:intergenic | 35.0% | |
| ACCACTAAATGTGGTCATAT+AGG | + | chr7.3:3676858-3676877 | None:intergenic | 35.0% | |
| ATTCCATTTGTCTGACAGAT+TGG | - | chr7.3:3676827-3676846 | MS.gene072485:CDS | 35.0% | |
| CATGGGTAAATCAATTGCAA+GGG | + | chr7.3:3676451-3676470 | None:intergenic | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.3:3678052-3678071 | MS.gene072485:intron | 35.0% | |
| CCAAAAGTAATGATCTCTTC+TGG | - | chr7.3:3677679-3677698 | MS.gene072485:CDS | 35.0% | |
| CTGAAGAATTCTCAACAATC+CGG | + | chr7.3:3678622-3678641 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGGATGTTT+AGG | - | chr7.3:3678629-3678648 | MS.gene072485:intron | 35.0% | |
| GATGCAAACCAAAATGTTTG+TGG | - | chr7.3:3678677-3678696 | MS.gene072485:CDS | 35.0% | |
| GATTCATTCTAAGCGAAATC+TGG | + | chr7.3:3676392-3676411 | None:intergenic | 35.0% | |
| GTCTGAAAATAGCAAAACAG+TGG | - | chr7.3:3678871-3678890 | MS.gene072485:CDS | 35.0% | |
| TAAACTTCCTTCTCGAAATG+TGG | - | chr7.3:3676990-3677009 | MS.gene072485:CDS | 35.0% | |
| TAATTCGGTACCTAAAGTTG+AGG | - | chr7.3:3678124-3678143 | MS.gene072485:intron | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.3:3677819-3677838 | MS.gene072485:CDS | 35.0% | |
| TCTTTGAGCACGAGAATATT+CGG | + | chr7.3:3677897-3677916 | None:intergenic | 35.0% | |
| TGGAAAGTCATCTGCTTTAA+GGG | - | chr7.3:3678082-3678101 | MS.gene072485:intron | 35.0% | |
| TGTTACCTCCAATGATTATC+TGG | - | chr7.3:3677767-3677786 | MS.gene072485:CDS | 35.0% | |
| TTAACATCTTCTGAATCAGC+AGG | + | chr7.3:3676414-3676433 | None:intergenic | 35.0% | |
| TTACTGTAAGTAGAAGATCG+GGG | + | chr7.3:3678017-3678036 | None:intergenic | 35.0% | |
| TTCGAGAAGGAAGTTTAAGA+AGG | + | chr7.3:3676987-3677006 | None:intergenic | 35.0% | |
| TTGAAGTCTACTGTTGGATT+CGG | - | chr7.3:3677486-3677505 | MS.gene072485:CDS | 35.0% | |
| TTTCACCTTCAAAATACCTC+AGG | - | chr7.3:3678838-3678857 | MS.gene072485:CDS | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | - | chr7.3:3676613-3676632 | MS.gene072485:CDS | 35.0% |
| ! | AATTGGCTGTCCATATTTTG+CGG | - | chr7.3:3677083-3677102 | MS.gene072485:CDS | 35.0% |
| ! | ATAGGACATAACCTTTTTGC+CGG | - | chr7.3:3676672-3676691 | MS.gene072485:CDS | 35.0% |
| ! | ATGCTTAGATTGTTTCTCCT+AGG | - | chr7.3:3677159-3677178 | MS.gene072485:CDS | 35.0% |
| ! | CCAGAAGAGATCATTACTTT+TGG | + | chr7.3:3677682-3677701 | None:intergenic | 35.0% |
| ! | CTGAAAGCTTCACTAGTTTA+TGG | - | chr7.3:3677199-3677218 | MS.gene072485:CDS | 35.0% |
| ! | GAAGCATCTTCTAATTCAAC+TGG | + | chr7.3:3678296-3678315 | None:intergenic | 35.0% |
| ! | TAACTGGACCACAAACATTT+TGG | + | chr7.3:3678688-3678707 | None:intergenic | 35.0% |
| !! | ACTTTAGGTACCGAATTAAC+AGG | + | chr7.3:3678122-3678141 | None:intergenic | 35.0% |
| !!! | GACATGGATTTTTTGCCTTT+AGG | + | chr7.3:3678922-3678941 | None:intergenic | 35.0% |
| !!! | TTGAGGTAGATTTTGATTGC+AGG | - | chr7.3:3678141-3678160 | MS.gene072485:intron | 35.0% |
| !!! | TTGCTATTTTCAGACTTCGA+TGG | + | chr7.3:3678866-3678885 | None:intergenic | 35.0% |
| AAAGAAGGAGAAGCCAAAGT+TGG | - | chr7.3:3677912-3677931 | MS.gene072485:CDS | 40.0% | |
| AAGCCAATCTGTCAGACAAA+TGG | + | chr7.3:3676833-3676852 | None:intergenic | 40.0% | |
| AGCAAGGAATGAAAGGATCT+TGG | + | chr7.3:3679144-3679163 | None:intergenic | 40.0% | |
| ATCTCAAAATGCTCTGTCAC+AGG | - | chr7.3:3676746-3676765 | MS.gene072485:CDS | 40.0% | |
| ATGCAGCCGTTCCTATTAAA+AGG | - | chr7.3:3678561-3678580 | MS.gene072485:intron | 40.0% | |
| ATGTCTAACATCTGCTTCTC+AGG | - | chr7.3:3678937-3678956 | MS.gene072485:CDS | 40.0% | |
| ATTCATCGAGAACAAAGGGA+TGG | - | chr7.3:3676554-3676573 | MS.gene072485:CDS | 40.0% | |
| ATTTACCCATGTCAGACACA+TGG | - | chr7.3:3676460-3676479 | MS.gene072485:CDS | 40.0% | |
| CAGGAAGGTAAACCATAGAA+AGG | - | chr7.3:3678160-3678179 | MS.gene072485:intron | 40.0% | |
| CCTTGAAAACTTCTCAACAC+CGG | + | chr7.3:3677805-3677824 | None:intergenic | 40.0% | |
| CGAAGTGCAGGAAGAAAAAA+GGG | - | chr7.3:3676637-3676656 | MS.gene072485:CDS | 40.0% | |
| CGGATTGTTGAGAATTCTTC+AGG | - | chr7.3:3678620-3678639 | MS.gene072485:intron | 40.0% | |
| CTATTCGAGGACTGAATTCA+GGG | + | chr7.3:3676323-3676342 | None:intergenic | 40.0% | |
| CTTGAAAACTTCTCAACACC+GGG | + | chr7.3:3677804-3677823 | None:intergenic | 40.0% | |
| GAATCCAACAGTAGACTTCA+AGG | + | chr7.3:3677487-3677506 | None:intergenic | 40.0% | |
| GACAATAGTTCATGTTGCCT+CGG | + | chr7.3:3676699-3676718 | None:intergenic | 40.0% | |
| GCCTATATGACCACATTTAG+TGG | - | chr7.3:3676854-3676873 | MS.gene072485:CDS | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.3:3677753-3677772 | None:intergenic | 40.0% | |
| GTGGAAAGTCATCTGCTTTA+AGG | - | chr7.3:3678081-3678100 | MS.gene072485:intron | 40.0% | |
| TCATTCTGCTGATGACTAAC+TGG | + | chr7.3:3678704-3678723 | None:intergenic | 40.0% | |
| TCGAAGTGCAGGAAGAAAAA+AGG | - | chr7.3:3676636-3676655 | MS.gene072485:CDS | 40.0% | |
| TCTGATTTCGCAATCACAGA+AGG | + | chr7.3:3676369-3676388 | None:intergenic | 40.0% | |
| TCTTCCTTGAAGTCTACTGT+TGG | - | chr7.3:3677480-3677499 | MS.gene072485:CDS | 40.0% | |
| TGAGAAGCAGATGTTAGACA+TGG | + | chr7.3:3678938-3678957 | None:intergenic | 40.0% | |
| TGAGATTCTTCAGAGACATG+AGG | + | chr7.3:3676732-3676751 | None:intergenic | 40.0% | |
| TTCATCGAGAACAAAGGGAT+GGG | - | chr7.3:3676555-3676574 | MS.gene072485:CDS | 40.0% | |
| ! | AATAAAACTGATGGGTGCAG+TGG | - | chr7.3:3678422-3678441 | MS.gene072485:intron | 40.0% |
| ! | AATCCGGCTTTTCTCTGATT+TGG | + | chr7.3:3678606-3678625 | None:intergenic | 40.0% |
| ! | AATTGATGATTCAGCGAGGA+AGG | - | chr7.3:3678361-3678380 | MS.gene072485:intron | 40.0% |
| ! | CAGGATGTTTAGGATTCTCT+CGG | - | chr7.3:3678639-3678658 | MS.gene072485:intron | 40.0% |
| ! | CTACAATTGATGATTCAGCG+AGG | - | chr7.3:3678357-3678376 | MS.gene072485:intron | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.3:3677609-3677628 | MS.gene072485:CDS | 40.0% |
| ! | TTTTAGGCGCATCCTTTCTA+TGG | + | chr7.3:3678175-3678194 | None:intergenic | 40.0% |
| !! | ATTGATACCAGTTTGGTGCA+TGG | - | chr7.3:3678059-3678078 | MS.gene072485:intron | 40.0% |
| !! | GTAGGTATTGGTAAGGAGAA+GGG | - | chr7.3:3677525-3677544 | MS.gene072485:CDS | 40.0% |
| !! | TGGTACCTGAGGTATTTTGA+AGG | + | chr7.3:3678846-3678865 | None:intergenic | 40.0% |
| !! | TGTAGGTATTGGTAAGGAGA+AGG | - | chr7.3:3677524-3677543 | MS.gene072485:CDS | 40.0% |
| !!! | GGTAGATTTTGATTGCAGGA+AGG | - | chr7.3:3678145-3678164 | MS.gene072485:intron | 40.0% |
| AAAGCTTTGCAAGCTGGTGT+TGG | + | chr7.3:3677600-3677619 | None:intergenic | 45.0% | |
| AACAGCCTGATATGAATCCG+AGG | - | chr7.3:3679011-3679030 | MS.gene072485:CDS | 45.0% | |
| AATAGGTCATGCATACCAGG+CGG | - | chr7.3:3676338-3676357 | MS.gene072485:CDS | 45.0% | |
| ACATCGCAAGGGATTCTCAA+AGG | + | chr7.3:3678977-3678996 | None:intergenic | 45.0% | |
| ATCACTCCATGTGTCTGACA+TGG | + | chr7.3:3676469-3676488 | None:intergenic | 45.0% | |
| CAAAGATGAGCAAGGCCTAA+AGG | - | chr7.3:3678904-3678923 | MS.gene072485:CDS | 45.0% | |
| CAGCCGTTCCTATTAAAAGG+AGG | - | chr7.3:3678564-3678583 | MS.gene072485:intron | 45.0% | |
| CCAAAGAACCAACATCGCAA+GGG | + | chr7.3:3678988-3679007 | None:intergenic | 45.0% | |
| CCTATTCGAGGACTGAATTC+AGG | + | chr7.3:3676324-3676343 | None:intergenic | 45.0% | |
| CCTGAATTCAGTCCTCGAAT+AGG | - | chr7.3:3676321-3676340 | MS.gene072485:CDS | 45.0% | |
| CTCATTGCAGCTACCAACTT+TGG | + | chr7.3:3677928-3677947 | None:intergenic | 45.0% | |
| CTTGTGGAAGCTGTAGGTAT+TGG | - | chr7.3:3677513-3677532 | MS.gene072485:CDS | 45.0% | |
| CTTTAGGCCTTGCTCATCTT+TGG | + | chr7.3:3678906-3678925 | None:intergenic | 45.0% | |
| GAAGACAAAGCTTTGCAAGC+TGG | + | chr7.3:3677606-3677625 | None:intergenic | 45.0% | |
| GATGCTTCTACGATGACTAC+TGG | - | chr7.3:3678308-3678327 | MS.gene072485:intron | 45.0% | |
| GGTCTTCCGAGAGAAAGTAA+GGG | - | chr7.3:3678329-3678348 | MS.gene072485:intron | 45.0% | |
| GTGCCAAATCAGAGAAAAGC+CGG | - | chr7.3:3678600-3678619 | MS.gene072485:intron | 45.0% | |
| TCACTCCATGTGTCTGACAT+GGG | + | chr7.3:3676468-3676487 | None:intergenic | 45.0% | |
| TCATCGAGAACAAAGGGATG+GGG | - | chr7.3:3676556-3676575 | MS.gene072485:CDS | 45.0% | |
| TCCAAAGAACCAACATCGCA+AGG | + | chr7.3:3678989-3679008 | None:intergenic | 45.0% | |
| TCCTTTCATTCCTTGCTGCA+AGG | - | chr7.3:3679147-3679166 | MS.gene072485:CDS | 45.0% | |
| TCGAATAGGTCATGCATACC+AGG | - | chr7.3:3676335-3676354 | MS.gene072485:CDS | 45.0% | |
| TGCAGTGGTGTATCTAACAG+TGG | - | chr7.3:3678437-3678456 | MS.gene072485:intron | 45.0% | |
| TGGTATGCATGACCTATTCG+AGG | + | chr7.3:3676336-3676355 | None:intergenic | 45.0% | |
| TGGTCTTCCGAGAGAAAGTA+AGG | - | chr7.3:3678328-3678347 | MS.gene072485:intron | 45.0% | |
| TGTCTCCTCGGATTCATATC+AGG | + | chr7.3:3679019-3679038 | None:intergenic | 45.0% | |
| TTCTTCAGCAGACAGAAGTG+TGG | - | chr7.3:3678733-3678752 | MS.gene072485:CDS | 45.0% | |
| TTGAGAATCCCTTGCGATGT+TGG | - | chr7.3:3678977-3678996 | MS.gene072485:CDS | 45.0% | |
| ! | AGAAGTGTGGAAGAGGATGA+TGG | - | chr7.3:3678746-3678765 | MS.gene072485:CDS | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.3:3677691-3677710 | MS.gene072485:CDS | 45.0% |
| ! | TGAAAGGATCTTGGTGTGTC+TGG | + | chr7.3:3679135-3679154 | None:intergenic | 45.0% |
| !! | CAAAGTTGGTAGCTGCAATG+AGG | - | chr7.3:3677926-3677945 | MS.gene072485:CDS | 45.0% |
| !! | CCGGTGTTGAGAAGTTTTCA+AGG | - | chr7.3:3677802-3677821 | MS.gene072485:CDS | 45.0% |
| !! | GGAAGCTGTAGGTATTGGTA+AGG | - | chr7.3:3677518-3677537 | MS.gene072485:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.3:3677741-3677760 | MS.gene072485:CDS | 45.0% |
| !! | TTTCTAGAGCTCTGTCTCCT+CGG | + | chr7.3:3679031-3679050 | None:intergenic | 45.0% |
| AAGTAGAAGATCGGGGCTTG+AGG | + | chr7.3:3678010-3678029 | None:intergenic | 50.0% | |
| ATCGGGGCTTGAGGTAACAT+TGG | + | chr7.3:3678001-3678020 | None:intergenic | 50.0% | |
| ATCGTAGATGGTCGAAGTGC+AGG | - | chr7.3:3676625-3676644 | MS.gene072485:CDS | 50.0% | |
| ATGGCAGCCAAAGATGAGCA+AGG | - | chr7.3:3678896-3678915 | MS.gene072485:CDS | 50.0% | |
| CTCAATCGGAGAGCAAGATC+AGG | - | chr7.3:3678527-3678546 | MS.gene072485:intron | 50.0% | |
| CTTCCGAGAGAAAGTAAGGG+TGG | - | chr7.3:3678332-3678351 | MS.gene072485:intron | 50.0% | |
| CTTTCCACCATGCACCAAAC+TGG | + | chr7.3:3678069-3678088 | None:intergenic | 50.0% | |
| GAGCCACCCTTACTTTCTCT+CGG | + | chr7.3:3678338-3678357 | None:intergenic | 50.0% | |
| GAGGGCAGAACTTCTCTAGA+AGG | - | chr7.3:3677450-3677469 | MS.gene072485:CDS | 50.0% | |
| GCCTTGCAGCAAGGAATGAA+AGG | + | chr7.3:3679151-3679170 | None:intergenic | 50.0% | |
| TAGTTCATGTTGCCTCGGTC+CGG | + | chr7.3:3676694-3676713 | None:intergenic | 50.0% | |
| TCACAGAAGGAATTTCCGCC+TGG | + | chr7.3:3676356-3676375 | None:intergenic | 50.0% | |
| TCAGACTTCGATGGTACCTG+AGG | + | chr7.3:3678857-3678876 | None:intergenic | 50.0% | |
| TCTGTCTCTTTGGCACATGC+AGG | + | chr7.3:3679099-3679118 | None:intergenic | 50.0% | |
| TGATGATTCAGCGAGGAAGG+TGG | - | chr7.3:3678364-3678383 | MS.gene072485:intron | 50.0% | |
| TGTTGGATTCGGCGTACTTG+TGG | - | chr7.3:3677497-3677516 | MS.gene072485:CDS | 50.0% | |
| TTCATGGACCTTGCGTCTGA+TGG | - | chr7.3:3676294-3676313 | MS.gene072485:CDS | 50.0% | |
| ! | AGCAGACAGAAGTGTGGAAG+AGG | - | chr7.3:3678739-3678758 | MS.gene072485:CDS | 50.0% |
| ! | ATAACCTTTTTGCCGGACCG+AGG | - | chr7.3:3676679-3676698 | MS.gene072485:CDS | 50.0% |
| !! | CCCTTGCGATGTTGGTTCTT+TGG | - | chr7.3:3678985-3679004 | MS.gene072485:CDS | 50.0% |
| !! | GATACCAGTTTGGTGCATGG+TGG | - | chr7.3:3678062-3678081 | MS.gene072485:intron | 50.0% |
| AACGCTTGAACGTCCTTCCC+AGG | + | chr7.3:3677576-3677595 | None:intergenic | 55.0% | |
| AAGGGAGACCTTACCAGGCT+TGG | - | chr7.3:3677543-3677562 | MS.gene072485:CDS | 55.0% | |
| AGACCTTACCAGGCTTGGCA+TGG | - | chr7.3:3677548-3677567 | MS.gene072485:CDS | 55.0% | |
| AGGAGAAGGGAGACCTTACC+AGG | - | chr7.3:3677538-3677557 | MS.gene072485:CDS | 55.0% | |
| CAACCTCTTGCCAGTAAGCG+GGG | + | chr7.3:3677717-3677736 | None:intergenic | 55.0% | |
| CATGTACGAGCCTTGCAGCA+AGG | + | chr7.3:3679160-3679179 | None:intergenic | 55.0% | |
| CCAACCTCTTGCCAGTAAGC+GGG | + | chr7.3:3677718-3677737 | None:intergenic | 55.0% | |
| CGAGGAAGGTGGAAGCTAAG+AGG | - | chr7.3:3678375-3678394 | MS.gene072485:intron | 55.0% | |
| GAAGGTGGAAGCTAAGAGGC+TGG | - | chr7.3:3678379-3678398 | MS.gene072485:intron | 55.0% | |
| GCCAACCTCTTGCCAGTAAG+CGG | + | chr7.3:3677719-3677738 | None:intergenic | 55.0% | |
| GGCGTACTTGTGGAAGCTGT+AGG | - | chr7.3:3677507-3677526 | MS.gene072485:CDS | 55.0% | |
| GTTCCATGCCAAGCCTGGTA+AGG | + | chr7.3:3677554-3677573 | None:intergenic | 55.0% | |
| ACCAGGCTTGGCATGGAACC+TGG | - | chr7.3:3677555-3677574 | MS.gene072485:CDS | 60.0% | |
| AGCTGTTTGGCCCCGCTTAC+TGG | - | chr7.3:3677704-3677723 | MS.gene072485:CDS | 60.0% | |
| CAGGGTCTCCATCAGACGCA+AGG | + | chr7.3:3676305-3676324 | None:intergenic | 60.0% | |
| CCAGGCTTGGCATGGAACCT+GGG | - | chr7.3:3677556-3677575 | MS.gene072485:CDS | 60.0% | |
| CCCGCTTACTGGCAAGAGGT+TGG | - | chr7.3:3677715-3677734 | MS.gene072485:CDS | 60.0% | |
| GCTTGGCATGGAACCTGGGA+AGG | - | chr7.3:3677560-3677579 | MS.gene072485:CDS | 60.0% | |
| GTTGCCTCGGTCCGGCAAAA+AGG | + | chr7.3:3676686-3676705 | None:intergenic | 60.0% | |
| CCCAGGTTCCATGCCAAGCC+TGG | + | chr7.3:3677559-3677578 | None:intergenic | 65.0% | |
| TGGCCCCGCTTACTGGCAAG+AGG | - | chr7.3:3677711-3677730 | MS.gene072485:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3676261 | 3679180 | 3676261 | ID=MS.gene072485 |
| chr7.3 | mRNA | 3676261 | 3679180 | 3676261 | ID=MS.gene072485.t1;Parent=MS.gene072485 |
| chr7.3 | exon | 3678674 | 3679180 | 3678674 | ID=MS.gene072485.t1.exon1;Parent=MS.gene072485.t1 |
| chr7.3 | CDS | 3678674 | 3679180 | 3678674 | ID=cds.MS.gene072485.t1;Parent=MS.gene072485.t1 |
| chr7.3 | exon | 3676261 | 3678009 | 3676261 | ID=MS.gene072485.t1.exon2;Parent=MS.gene072485.t1 |
| chr7.3 | CDS | 3676261 | 3678009 | 3676261 | ID=cds.MS.gene072485.t1;Parent=MS.gene072485.t1 |
| Gene Sequence |
| Protein sequence |
