Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78587.t1 | RHN49267.1 | 92.5 | 749 | 54 | 2 | 1 | 749 | 26 | 772 | 0.00E+00 | 1347.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78587.t1 | G7KYL7 | 92.5 | 749 | 54 | 2 | 1 | 749 | 1 | 747 | 0.0e+00 | 1347.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78587 | MS.gene67159 | PPI |
| MS.gene78587 | MS.gene78584 | PPI |
| MS.gene67159 | MS.gene78587 | PPI |
| MS.gene78587 | MS.gene050892 | PPI |
| MS.gene78587 | MS.gene050942 | PPI |
| MS.gene78587 | MS.gene29350 | PPI |
| MS.gene78587 | MS.gene050891 | PPI |
| MS.gene050738 | MS.gene78587 | PPI |
| MS.gene78587 | MS.gene072482 | PPI |
| MS.gene78587 | MS.gene072542 | PPI |
| MS.gene78587 | MS.gene072481 | PPI |
| MS.gene78587 | MS.gene063225 | PPI |
| MS.gene78587 | MS.gene78588 | PPI |
| MS.gene78587 | MS.gene054416 | PPI |
| MS.gene78587 | MS.gene65461 | PPI |
| MS.gene78587 | MS.gene072483 | PPI |
| MS.gene78587 | MS.gene29351 | PPI |
| MS.gene78587 | MS.gene050890 | PPI |
| MS.gene78587 | MS.gene050893 | PPI |
| MS.gene78587 | MS.gene050738 | PPI |
| MS.gene78587 | MS.gene050889 | PPI |
| MS.gene78587 | MS.gene053360 | PPI |
| MS.gene78587 | MS.gene29352 | PPI |
| MS.gene78587 | MS.gene072484 | PPI |
| MS.gene78587 | MS.gene78586 | PPI |
| MS.gene78587 | MS.gene072485 | PPI |
| MS.gene78587 | MS.gene78585 | PPI |
| MS.gene072481 | MS.gene78587 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78587.t1 | MTR_7g113280 | 92.523 | 749 | 54 | 2 | 1 | 749 | 1 | 747 | 0.0 | 1422 |
| MS.gene78587.t1 | MTR_1g041895 | 65.680 | 845 | 221 | 10 | 1 | 783 | 1 | 838 | 0.0 | 1015 |
| MS.gene78587.t1 | MTR_7g113270 | 69.801 | 755 | 203 | 10 | 1 | 749 | 1 | 736 | 0.0 | 963 |
| MS.gene78587.t1 | MTR_7g113220 | 68.477 | 755 | 209 | 11 | 1 | 749 | 1 | 732 | 0.0 | 943 |
| MS.gene78587.t1 | MTR_7g113250 | 73.441 | 433 | 113 | 2 | 14 | 445 | 2 | 433 | 0.0 | 645 |
| MS.gene78587.t1 | MTR_7g113250 | 57.426 | 202 | 64 | 4 | 588 | 771 | 434 | 631 | 8.78e-56 | 203 |
| MS.gene78587.t1 | MTR_7g112390 | 59.560 | 455 | 88 | 6 | 105 | 537 | 1 | 381 | 6.03e-160 | 481 |
| MS.gene78587.t1 | MTR_7g112390 | 55.094 | 265 | 62 | 5 | 537 | 782 | 478 | 704 | 2.77e-66 | 234 |
| MS.gene78587.t1 | MTR_7g108470 | 46.921 | 341 | 169 | 4 | 68 | 401 | 140 | 475 | 8.39e-94 | 314 |
| MS.gene78587.t1 | MTR_4g119630 | 41.620 | 358 | 166 | 5 | 19 | 338 | 37 | 389 | 5.27e-84 | 275 |
| MS.gene78587.t1 | MTR_3g049350 | 73.964 | 169 | 43 | 1 | 278 | 445 | 3 | 171 | 1.17e-74 | 243 |
| MS.gene78587.t1 | MTR_3g049350 | 56.250 | 80 | 32 | 1 | 588 | 667 | 172 | 248 | 9.25e-19 | 87.4 |
| MS.gene78587.t1 | MTR_2g436970 | 37.705 | 305 | 178 | 5 | 26 | 330 | 17 | 309 | 7.98e-60 | 209 |
| MS.gene78587.t1 | MTR_7g113290 | 68.966 | 116 | 33 | 1 | 527 | 642 | 13 | 125 | 6.86e-41 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78587.t1 | AT1G09040 | 48.538 | 342 | 159 | 6 | 70 | 399 | 138 | 474 | 6.54e-94 | 313 |
| MS.gene78587.t1 | AT1G09050 | 48.060 | 335 | 161 | 5 | 73 | 399 | 145 | 474 | 7.48e-91 | 305 |
| MS.gene78587.t1 | AT1G09050 | 48.060 | 335 | 161 | 5 | 73 | 399 | 145 | 474 | 7.48e-91 | 305 |
| MS.gene78587.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 1.38e-86 | 291 |
| MS.gene78587.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 1.38e-86 | 291 |
| MS.gene78587.t1 | AT1G55050 | 38.050 | 523 | 261 | 14 | 73 | 580 | 128 | 602 | 1.41e-79 | 275 |
| MS.gene78587.t1 | AT1G55050 | 38.050 | 523 | 261 | 14 | 73 | 580 | 128 | 602 | 1.41e-79 | 275 |
Find 154 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAAGCCATCTGATTTC+AGG | 0.202807 | 7.4:+3498305 | MS.gene78587:CDS |
| TAACTGAATGACAGACATTT+TGG | 0.202825 | 7.4:-3498945 | None:intergenic |
| CCAAAAGTGTCGATCTCTTC+TGG | 0.207679 | 7.4:+3497903 | MS.gene78587:CDS |
| TAAAGATCATATAAAATTAA+TGG | 0.218425 | 7.4:+3498258 | MS.gene78587:CDS |
| TGCAAAGCTCTGTCTTCTTT+TGG | 0.219428 | 7.4:+3497830 | MS.gene78587:CDS |
| AAAGGGAGAAAATGTATAAT+AGG | 0.228776 | 7.4:+3497287 | MS.gene78587:CDS |
| ACCTTGTGATGTTGATTCTT+TGG | 0.236319 | 7.4:+3499260 | MS.gene78587:CDS |
| GGAATTTCTGCCTGGTATTC+AGG | 0.255405 | 7.4:-3496978 | None:intergenic |
| TGGCTTTCAACCATCTTGTT+TGG | 0.265434 | 7.4:-3498688 | None:intergenic |
| AAGAAAGACCAGATATTCTT+TGG | 0.279773 | 7.4:-3497999 | None:intergenic |
| AGCTGTTTGGCCTCGATTAC+TGG | 0.281580 | 7.4:+3497928 | MS.gene78587:CDS |
| TCGGAGTGCAGGAAATTAAA+AGG | 0.293911 | 7.4:+3497269 | MS.gene78587:CDS |
| CCAGAAGAGATCGACACTTT+TGG | 0.296338 | 7.4:-3497903 | None:intergenic |
| TGTCTCCTTGGATTTATATC+AGG | 0.302477 | 7.4:-3499291 | None:intergenic |
| TTGAATTGGAAGATGCTTCT+AGG | 0.302937 | 7.4:+3498545 | MS.gene78587:CDS |
| ATGCAGCTGTTCCTATTAAA+AGG | 0.307883 | 7.4:+3498806 | MS.gene78587:CDS |
| ACTTTACAAACTGAATTAAC+AGG | 0.318377 | 7.4:-3498343 | None:intergenic |
| TGAGAATTCTTCAGGAGGTT+TGG | 0.326165 | 7.4:+3498873 | MS.gene78587:CDS |
| AATTCAACTGACGGATATTT+CGG | 0.333248 | 7.4:-3498529 | None:intergenic |
| TATCTGGTCTTTCTTATTCC+TGG | 0.333602 | 7.4:+3498007 | MS.gene78587:CDS |
| GAAATATCCGTCAGTTGAAT+TGG | 0.333878 | 7.4:+3498531 | MS.gene78587:CDS |
| TCTTCAAGCTCAAGAATATT+CGG | 0.336030 | 7.4:-3498118 | None:intergenic |
| GAGAATTCTTCAGGAGGTTT+GGG | 0.337535 | 7.4:+3498874 | MS.gene78587:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.339278 | 7.4:+3497915 | MS.gene78587:CDS |
| AATCCTTGACAGGAAGATTT+CGG | 0.340794 | 7.4:+3497870 | MS.gene78587:CDS |
| TATAATAGGGAAGAAACTTT+TGG | 0.348101 | 7.4:+3497301 | MS.gene78587:CDS |
| GCTGCTGGTGTAAAAGATAA+AGG | 0.352913 | 7.4:+3498376 | MS.gene78587:CDS |
| AAATCACTTTCCTCTGCAAT+AGG | 0.356126 | 7.4:+3497071 | MS.gene78587:CDS |
| AGGTTTGGGATCAGATAAAC+TGG | 0.360856 | 7.4:+3498888 | MS.gene78587:CDS |
| GATACCAGTTTGGTGCATAA+AGG | 0.364116 | 7.4:+3498286 | MS.gene78587:CDS |
| TTTCTAGTGCTCTGTCTCCT+TGG | 0.375889 | 7.4:-3499303 | None:intergenic |
| CACATCACTGAGAATTCTTC+AGG | 0.383165 | 7.4:+3498865 | MS.gene78587:CDS |
| CTTCTGTGTTTGATGATAAT+CGG | 0.390702 | 7.4:+3498725 | MS.gene78587:CDS |
| TGTTACCTCCAAAGAATATC+TGG | 0.396531 | 7.4:+3497991 | MS.gene78587:CDS |
| TTTATTGTAGGTAAAAGATC+GGG | 0.411701 | 7.4:-3498239 | None:intergenic |
| AAGGGAGAAAATGTATAATA+GGG | 0.412435 | 7.4:+3497288 | MS.gene78587:CDS |
| AAAGATCATATAAAATTAAT+GGG | 0.413384 | 7.4:+3498259 | MS.gene78587:CDS |
| AATGGGTATTGATACCAGTT+TGG | 0.424546 | 7.4:+3498276 | MS.gene78587:CDS |
| CTTTCCTTTATGCACCAAAC+TGG | 0.426656 | 7.4:-3498290 | None:intergenic |
| TTCAATCAGAGAGTAATATC+TGG | 0.436616 | 7.4:+3498772 | MS.gene78587:CDS |
| CAAAAGTGTCGATCTCTTCT+GGG | 0.438413 | 7.4:+3497904 | MS.gene78587:CDS |
| GTCGACATTTGTTCAGATCA+TGG | 0.451300 | 7.4:+3499466 | MS.gene78587:CDS |
| ACAGATTTCGATGGAACCTT+GGG | 0.459053 | 7.4:-3499126 | None:intergenic |
| CTCGAAAACTTCTCAACGCC+AGG | 0.461495 | 7.4:-3498025 | None:intergenic |
| AGGAAAGCCATCTGATTTCA+GGG | 0.463547 | 7.4:+3498306 | MS.gene78587:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.4:+3497258 | MS.gene78587:CDS |
| AACTGATGATTCACGAAGAA+TGG | 0.471427 | 7.4:+3498609 | MS.gene78587:CDS |
| TACAGATTTCGATGGAACCT+TGG | 0.472631 | 7.4:-3499127 | None:intergenic |
| AGGCCATGCTCACCTTTCTC+TGG | 0.475404 | 7.4:-3499174 | None:intergenic |
| GCAGAATTCGACAAAGTTGA+CGG | 0.478357 | 7.4:+3498453 | MS.gene78587:CDS |
| GTTCCACATCAAGCCTAGTA+AGG | 0.483315 | 7.4:-3497769 | None:intergenic |
| ATGTCTAGCATCAGCCGCTC+AGG | 0.485261 | 7.4:+3499212 | MS.gene78587:CDS |
| GATATAATTCAATCCTTGAC+AGG | 0.488303 | 7.4:+3497860 | MS.gene78587:CDS |
| AAAGTTGAGGCAGGTGCTGC+TGG | 0.488918 | 7.4:+3498361 | MS.gene78587:CDS |
| AAAGATTCATAGAGAACAAA+CGG | 0.491729 | 7.4:+3497183 | MS.gene78587:CDS |
| CTTGTGGAAGCAGTAAGTAT+TGG | 0.492851 | 7.4:+3497731 | MS.gene78587:CDS |
| AGGAGAAGGGAGACCTTACT+AGG | 0.496067 | 7.4:+3497756 | MS.gene78587:CDS |
| TCAGTTTGTAAAGTTGAGGC+AGG | 0.497900 | 7.4:+3498352 | MS.gene78587:CDS |
| CTTTATTGTAGGTAAAAGAT+CGG | 0.498545 | 7.4:-3498240 | None:intergenic |
| GTAACATAGCCTTGATACAT+TGG | 0.499915 | 7.4:-3497974 | None:intergenic |
| ATCATTGACAGTTAGAGCAT+TGG | 0.500083 | 7.4:+3499329 | MS.gene78587:CDS |
| ATGGTGACGGCGCCAGAGAA+AGG | 0.500312 | 7.4:+3499162 | MS.gene78587:CDS |
| AGTAAGTATTGGCAAGGAGA+AGG | 0.505358 | 7.4:+3497742 | MS.gene78587:CDS |
| GCCCCAGGACTGTTCTTCCT+AGG | 0.508970 | 7.4:-3497791 | None:intergenic |
| ATACTCCATGTGACTGGGAT+GGG | 0.509555 | 7.4:-3497098 | None:intergenic |
| TGGAACCTTGGGTCTGTTGA+GGG | 0.510322 | 7.4:-3499115 | None:intergenic |
| GAACCTAGGAAGAACAGTCC+TGG | 0.510751 | 7.4:+3497788 | MS.gene78587:CDS |
| TCGACATTTGTTCAGATCAT+GGG | 0.513688 | 7.4:+3499467 | MS.gene78587:CDS |
| CTGCTGGTGTAAAAGATAAA+GGG | 0.519980 | 7.4:+3498377 | MS.gene78587:CDS |
| CAATGAGGAAGAGCCAGAAA+AGG | 0.522275 | 7.4:+3498165 | MS.gene78587:CDS |
| ATGGAACCTTGGGTCTGTTG+AGG | 0.523435 | 7.4:-3499116 | None:intergenic |
| TCTTATATGAAGTCTACTGT+TGG | 0.528919 | 7.4:+3497698 | MS.gene78587:CDS |
| TCTGATTGCTCAATCAAAGA+AGG | 0.529069 | 7.4:-3496999 | None:intergenic |
| TCGAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.4:+3498043 | MS.gene78587:CDS |
| TTGATATTTACAGATTTCGA+TGG | 0.530008 | 7.4:-3499135 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.530913 | 7.4:+3497246 | MS.gene78587:CDS |
| ATCATAATCATTCTGCTCAA+AGG | 0.531350 | 7.4:-3496901 | None:intergenic |
| TCAGCAATACTCCATGTGAC+TGG | 0.532987 | 7.4:-3497104 | None:intergenic |
| ATGAAGTCTACTGTTGGACT+TGG | 0.533142 | 7.4:+3497704 | MS.gene78587:CDS |
| TCGAATCGGTCCTGAATACC+AGG | 0.536009 | 7.4:+3496968 | MS.gene78587:CDS |
| GACACAAATAGCTTTGTACT+AGG | 0.536661 | 7.4:+3497125 | MS.gene78587:CDS |
| GACATGAATCATTTGCCTCT+AGG | 0.537768 | 7.4:-3499194 | None:intergenic |
| AGCCGCTCAGGAAGTAGTTG+AGG | 0.539080 | 7.4:+3499224 | MS.gene78587:CDS |
| TGTTGGACTTGGCGTTCTTG+TGG | 0.539550 | 7.4:+3497715 | MS.gene78587:CDS |
| GTTTGTGCTGAAAATGCCCC+AGG | 0.539944 | 7.4:-3497806 | None:intergenic |
| AACCTAGGAAGAACAGTCCT+GGG | 0.541835 | 7.4:+3497789 | MS.gene78587:CDS |
| TTCAAATCCCTGAAATCAGA+TGG | 0.542406 | 7.4:-3498313 | None:intergenic |
| TTTAATAGGAACAGCTGCAT+GGG | 0.543232 | 7.4:-3498803 | None:intergenic |
| CTTGAATTCAGTCCTCGAAT+CGG | 0.544267 | 7.4:+3496954 | MS.gene78587:CDS |
| TTGATTGAAGATGGCAGTGT+TGG | 0.547346 | 7.4:+3499520 | MS.gene78587:CDS |
| TCATAGAGAACAAACGGATG+GGG | 0.548246 | 7.4:+3497189 | MS.gene78587:CDS |
| AATGAGGAAGAGCCAGAAAA+GGG | 0.549935 | 7.4:+3498166 | MS.gene78587:CDS |
| GTAAGTATTGGCAAGGAGAA+GGG | 0.554132 | 7.4:+3497743 | MS.gene78587:CDS |
| AAAGACCAGATATTCTTTGG+AGG | 0.555308 | 7.4:-3497996 | None:intergenic |
| CGGAGTGCAGGAAATTAAAA+GGG | 0.556354 | 7.4:+3497270 | MS.gene78587:CDS |
| CATTTCTCAACTTGAACGCA+AGG | 0.556373 | 7.4:-3499081 | None:intergenic |
| CAGCCGAAATCTTCCTGTCA+AGG | 0.558912 | 7.4:-3497873 | None:intergenic |
| GGGGCTTGAGGTAACATTGA+CGG | 0.564168 | 7.4:-3498219 | None:intergenic |
| TCTGAGCAACCAATGTATCA+AGG | 0.564748 | 7.4:+3497965 | MS.gene78587:CDS |
| CTCGATTACTGGCAAGAGGT+TGG | 0.566010 | 7.4:+3497939 | MS.gene78587:CDS |
| AGACCAGCTTTCACTTCGAA+CGG | 0.567796 | 7.4:+3497019 | MS.gene78587:CDS |
| GATCCGTTCGAAGTGAAAGC+TGG | 0.567844 | 7.4:-3497022 | None:intergenic |
| TTCATAGAGAACAAACGGAT+GGG | 0.571891 | 7.4:+3497188 | MS.gene78587:CDS |
| TGGTATTCAGGACCGATTCG+AGG | 0.572296 | 7.4:-3496966 | None:intergenic |
| AATCTTCTGAAAGAAAGTAA+AGG | 0.572900 | 7.4:+3498577 | MS.gene78587:CDS |
| AAGGAATGTAAAACATAGCA+AGG | 0.573770 | 7.4:+3498411 | MS.gene78587:CDS |
| TGGCCTCGATTACTGGCAAG+AGG | 0.576092 | 7.4:+3497935 | MS.gene78587:CDS |
| TCAAAGAAGGAATTTCTGCC+TGG | 0.578058 | 7.4:-3496986 | None:intergenic |
| GAATATTCTTGAGCTTGAAG+AGG | 0.578780 | 7.4:+3498120 | MS.gene78587:CDS |
| AGGTAAAAGATCGGGGCTTG+AGG | 0.579822 | 7.4:-3498231 | None:intergenic |
| AATACTCCATGTGACTGGGA+TGG | 0.580858 | 7.4:-3497099 | None:intergenic |
| GAGATTAACTGCTTGTGTCA+AGG | 0.581897 | 7.4:+3498831 | MS.gene78587:CDS |
| ATCTGTAAATATCAAAACAA+TGG | 0.583516 | 7.4:+3499143 | MS.gene78587:CDS |
| CTAGGCTTGATGTGGAACCT+AGG | 0.584890 | 7.4:+3497774 | MS.gene78587:CDS |
| TGATAGTGATCCAAACAAGA+TGG | 0.588516 | 7.4:+3498678 | MS.gene78587:CDS |
| TGCAGCAAGGTTCATACAAG+AGG | 0.588688 | 7.4:+3499429 | MS.gene78587:intron |
| TAATTCAGTTTGTAAAGTTG+AGG | 0.590421 | 7.4:+3498348 | MS.gene78587:CDS |
| GAAAGGTGAGCATGGCCTAG+AGG | 0.593104 | 7.4:+3499179 | MS.gene78587:CDS |
| TGAACATCTTCTGAATCAGT+AGG | 0.595610 | 7.4:-3497044 | None:intergenic |
| GATACCAATGGACTTTCCGA+AGG | 0.596842 | 7.4:+3498481 | MS.gene78587:CDS |
| CTGAAGAATTCTCAGTGATG+TGG | 0.597073 | 7.4:-3498864 | None:intergenic |
| ATTCATAGAGAACAAACGGA+TGG | 0.602448 | 7.4:+3497187 | MS.gene78587:CDS |
| ACATCACAAGGTGTTCTCAA+AGG | 0.603032 | 7.4:-3499249 | None:intergenic |
| TTGACGGTCATTGATACCAA+TGG | 0.605853 | 7.4:+3498469 | MS.gene78587:CDS |
| GCGCCAGAGAAAGGTGAGCA+TGG | 0.606459 | 7.4:+3499171 | MS.gene78587:CDS |
| TGATGATTCACGAAGAATGG+TGG | 0.607579 | 7.4:+3498612 | MS.gene78587:CDS |
| GCATCTTCCAATTCAACTGA+CGG | 0.608811 | 7.4:-3498538 | None:intergenic |
| AAATATCAAAACAATGGTGA+CGG | 0.614111 | 7.4:+3499149 | MS.gene78587:CDS |
| CAGCAATACTCCATGTGACT+GGG | 0.616407 | 7.4:-3497103 | None:intergenic |
| ATAAAGGGCAAAGTTATACA+AGG | 0.618599 | 7.4:+3498392 | MS.gene78587:CDS |
| GTTTGCCCATCCCAGTCACA+TGG | 0.618676 | 7.4:+3497093 | MS.gene78587:CDS |
| TTATTGTAGGTAAAAGATCG+GGG | 0.620178 | 7.4:-3498238 | None:intergenic |
| CAACCTCTTGCCAGTAATCG+AGG | 0.623252 | 7.4:-3497938 | None:intergenic |
| TTGATGATAATCGGATGAAG+AGG | 0.623283 | 7.4:+3498734 | MS.gene78587:CDS |
| ATCACTGAGAATTCTTCAGG+AGG | 0.625006 | 7.4:+3498868 | MS.gene78587:CDS |
| AACAGCCTGATATAAATCCA+AGG | 0.626073 | 7.4:+3499286 | MS.gene78587:CDS |
| GTTTCTAAATCATATGTCGA+TGG | 0.626151 | 7.4:+3497650 | MS.gene78587:CDS |
| AGACCTTACTAGGCTTGATG+TGG | 0.628161 | 7.4:+3497766 | MS.gene78587:CDS |
| TGAGATTTGTCAGAGACATG+AGG | 0.628677 | 7.4:-3497362 | None:intergenic |
| TCCAAAGAATCAACATCACA+AGG | 0.630329 | 7.4:-3499261 | None:intergenic |
| CATAGAGAACAAACGGATGG+GGG | 0.631391 | 7.4:+3497190 | MS.gene78587:CDS |
| AAGGATTGAATTATATCACT+AGG | 0.634298 | 7.4:-3497854 | None:intergenic |
| GGAAGCAGTAAGTATTGGCA+AGG | 0.637899 | 7.4:+3497736 | MS.gene78587:CDS |
| TAAAGTTCATAGCTGCAATG+AGG | 0.642923 | 7.4:+3498150 | MS.gene78587:CDS |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.4:+3497250 | MS.gene78587:CDS |
| GAAGCTAAGATGCTGATATG+TGG | 0.648506 | 7.4:+3498634 | MS.gene78587:CDS |
| CAGCTGTTCCTATTAAAAGG+AGG | 0.650589 | 7.4:+3498809 | MS.gene78587:CDS |
| TTCTTTAGCAGACAGAAGTG+TGG | 0.672598 | 7.4:+3499005 | MS.gene78587:CDS |
| TTACACCCTCAACAGACCCA+AGG | 0.679268 | 7.4:+3499110 | MS.gene78587:CDS |
| GATGGGCAAACCTATTGCAG+AGG | 0.681836 | 7.4:-3497081 | None:intergenic |
| TAGTGATGTCTTGAACAAAG+TGG | 0.700987 | 7.4:+3498087 | MS.gene78587:CDS |
| GGTTTGGGATCAGATAAACT+GGG | 0.714357 | 7.4:+3498889 | MS.gene78587:CDS |
| ACCTAGGAAGAACAGTCCTG+GGG | 0.724587 | 7.4:+3497790 | MS.gene78587:CDS |
| CTCCTCAACTACTTCCTGAG+CGG | 0.726279 | 7.4:-3499226 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATCATATAAAATTAAT+GGG | + | chr7.4:3498259-3498278 | MS.gene78587:CDS | 10.0% |
| !! | TAAAGATCATATAAAATTAA+TGG | + | chr7.4:3498258-3498277 | MS.gene78587:CDS | 10.0% |
| !!! | TTATTTAAAAAAAAAGGTAC+TGG | - | chr7.4:3497565-3497584 | None:intergenic | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | - | chr7.4:3498254-3498273 | None:intergenic | 15.0% |
| !! | ATCTGTAAATATCAAAACAA+TGG | + | chr7.4:3499143-3499162 | MS.gene78587:CDS | 20.0% |
| !!! | GAAATACTTACATTTTACTA+TGG | + | chr7.4:3497212-3497231 | MS.gene78587:CDS | 20.0% |
| !!! | TACTAGGTTTGTTTATTTTT+GGG | + | chr7.4:3497141-3497160 | MS.gene78587:CDS | 20.0% |
| ! | AAAGATTCATAGAGAACAAA+CGG | + | chr7.4:3497183-3497202 | MS.gene78587:CDS | 25.0% |
| ! | AAAGGGAGAAAATGTATAAT+AGG | + | chr7.4:3497287-3497306 | MS.gene78587:CDS | 25.0% |
| ! | AAATATCAAAACAATGGTGA+CGG | + | chr7.4:3499149-3499168 | MS.gene78587:CDS | 25.0% |
| ! | AAGGATTGAATTATATCACT+AGG | - | chr7.4:3497857-3497876 | None:intergenic | 25.0% |
| ! | AAGGGAGAAAATGTATAATA+GGG | + | chr7.4:3497288-3497307 | MS.gene78587:CDS | 25.0% |
| ! | ACTTTACAAACTGAATTAAC+AGG | - | chr7.4:3498346-3498365 | None:intergenic | 25.0% |
| ! | CTTTATTGTAGGTAAAAGAT+CGG | - | chr7.4:3498243-3498262 | None:intergenic | 25.0% |
| ! | CTTTGCTTATATTTATACTC+AGG | + | chr7.4:3497628-3497647 | MS.gene78587:intron | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | - | chr7.4:3497626-3497645 | None:intergenic | 25.0% |
| ! | TAATTCAGTTTGTAAAGTTG+AGG | + | chr7.4:3498348-3498367 | MS.gene78587:CDS | 25.0% |
| ! | TTGATATTTACAGATTTCGA+TGG | - | chr7.4:3499138-3499157 | None:intergenic | 25.0% |
| ! | TTTATTGTAGGTAAAAGATC+GGG | - | chr7.4:3498242-3498261 | None:intergenic | 25.0% |
| !! | AATCTTCTGAAAGAAAGTAA+AGG | + | chr7.4:3498577-3498596 | MS.gene78587:CDS | 25.0% |
| !! | ATCTCAAGATACATTTTTAC+AGG | + | chr7.4:3497379-3497398 | MS.gene78587:CDS | 25.0% |
| !! | TATAATAGGGAAGAAACTTT+TGG | + | chr7.4:3497301-3497320 | MS.gene78587:CDS | 25.0% |
| !! | TTTCTTCAATAGTTTTCCTT+CGG | - | chr7.4:3498500-3498519 | None:intergenic | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+TGG | + | chr7.4:3497140-3497159 | MS.gene78587:CDS | 25.0% |
| !!! | TAAAAAAAAAGGTACTGGTA+TGG | - | chr7.4:3497560-3497579 | None:intergenic | 25.0% |
| !!! | TAATGAAAAAAGCATTCTCA+AGG | + | chr7.4:3499035-3499054 | MS.gene78587:CDS | 25.0% |
| AAGAAAGACCAGATATTCTT+TGG | - | chr7.4:3498002-3498021 | None:intergenic | 30.0% | |
| AAGGAATGTAAAACATAGCA+AGG | + | chr7.4:3498411-3498430 | MS.gene78587:CDS | 30.0% | |
| ATAAAGGGCAAAGTTATACA+AGG | + | chr7.4:3498392-3498411 | MS.gene78587:CDS | 30.0% | |
| ATCATAATCATTCTGCTCAA+AGG | - | chr7.4:3496904-3496923 | None:intergenic | 30.0% | |
| ATGTGCAAAGTAGACAAAAA+AGG | + | chr7.4:3499376-3499395 | MS.gene78587:intron | 30.0% | |
| GATATAATTCAATCCTTGAC+AGG | + | chr7.4:3497860-3497879 | MS.gene78587:CDS | 30.0% | |
| GTTACAATGGTAATTGCAAT+GGG | + | chr7.4:3497518-3497537 | MS.gene78587:intron | 30.0% | |
| GTTTCTAAATCATATGTCGA+TGG | + | chr7.4:3497650-3497669 | MS.gene78587:CDS | 30.0% | |
| TCTTATATGAAGTCTACTGT+TGG | + | chr7.4:3497698-3497717 | MS.gene78587:CDS | 30.0% | |
| TCTTCAAGCTCAAGAATATT+CGG | - | chr7.4:3498121-3498140 | None:intergenic | 30.0% | |
| TGTTACAATGGTAATTGCAA+TGG | + | chr7.4:3497517-3497536 | MS.gene78587:intron | 30.0% | |
| TTATTGTAGGTAAAAGATCG+GGG | - | chr7.4:3498241-3498260 | None:intergenic | 30.0% | |
| TTCAATCAGAGAGTAATATC+TGG | + | chr7.4:3498772-3498791 | MS.gene78587:CDS | 30.0% | |
| ! | AATTCAACTGACGGATATTT+CGG | - | chr7.4:3498532-3498551 | None:intergenic | 30.0% |
| ! | CTTCTGTGTTTGATGATAAT+CGG | + | chr7.4:3498725-3498744 | MS.gene78587:CDS | 30.0% |
| ! | GTTAATCTCCTCCTTTTAAT+AGG | - | chr7.4:3498820-3498839 | None:intergenic | 30.0% |
| ! | TAACTGAATGACAGACATTT+TGG | - | chr7.4:3498948-3498967 | None:intergenic | 30.0% |
| !! | CAGTTTTAGTACAAGAAGAA+AGG | + | chr7.4:3499494-3499513 | MS.gene78587:CDS | 30.0% |
| !!! | CAGAAGTATGTTGATTTTTC+TGG | - | chr7.4:3498711-3498730 | None:intergenic | 30.0% |
| AAAGACCAGATATTCTTTGG+AGG | - | chr7.4:3497999-3498018 | None:intergenic | 35.0% | |
| AAAGTGAGGAATGAAGCAAA+TGG | - | chr7.4:3497612-3497631 | None:intergenic | 35.0% | |
| AAATCACTTTCCTCTGCAAT+AGG | + | chr7.4:3497071-3497090 | MS.gene78587:CDS | 35.0% | |
| AACAGCCTGATATAAATCCA+AGG | + | chr7.4:3499286-3499305 | MS.gene78587:CDS | 35.0% | |
| AACTGATGATTCACGAAGAA+TGG | + | chr7.4:3498609-3498628 | MS.gene78587:CDS | 35.0% | |
| AATCCTTGACAGGAAGATTT+CGG | + | chr7.4:3497870-3497889 | MS.gene78587:CDS | 35.0% | |
| ATCATTGACAGTTAGAGCAT+TGG | + | chr7.4:3499329-3499348 | MS.gene78587:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+AGG | + | chr7.4:3498806-3498825 | MS.gene78587:CDS | 35.0% | |
| ATTCATAGAGAACAAACGGA+TGG | + | chr7.4:3497187-3497206 | MS.gene78587:CDS | 35.0% | |
| CTGCTGGTGTAAAAGATAAA+GGG | + | chr7.4:3498377-3498396 | MS.gene78587:CDS | 35.0% | |
| GAAATATCCGTCAGTTGAAT+TGG | + | chr7.4:3498531-3498550 | MS.gene78587:CDS | 35.0% | |
| GAATATTCTTGAGCTTGAAG+AGG | + | chr7.4:3498120-3498139 | MS.gene78587:CDS | 35.0% | |
| GCTATGTGCATATGTTACAA+TGG | + | chr7.4:3497505-3497524 | MS.gene78587:intron | 35.0% | |
| TAAAGTTCATAGCTGCAATG+AGG | + | chr7.4:3498150-3498169 | MS.gene78587:CDS | 35.0% | |
| TAGTGATGTCTTGAACAAAG+TGG | + | chr7.4:3498087-3498106 | MS.gene78587:CDS | 35.0% | |
| TCCAAAGAATCAACATCACA+AGG | - | chr7.4:3499264-3499283 | None:intergenic | 35.0% | |
| TCGACATTTGTTCAGATCAT+GGG | + | chr7.4:3499467-3499486 | MS.gene78587:CDS | 35.0% | |
| TCTGATTGCTCAATCAAAGA+AGG | - | chr7.4:3497002-3497021 | None:intergenic | 35.0% | |
| TGAACATCTTCTGAATCAGT+AGG | - | chr7.4:3497047-3497066 | None:intergenic | 35.0% | |
| TGCAAAACCTTCACAAGTTA+TGG | + | chr7.4:3497456-3497475 | MS.gene78587:intron | 35.0% | |
| TGCATTGTAACATCAAACGA+AGG | - | chr7.4:3497440-3497459 | None:intergenic | 35.0% | |
| TGTCTCCTTGGATTTATATC+AGG | - | chr7.4:3499294-3499313 | None:intergenic | 35.0% | |
| TGTTACCTCCAAAGAATATC+TGG | + | chr7.4:3497991-3498010 | MS.gene78587:CDS | 35.0% | |
| TTCAAATCCCTGAAATCAGA+TGG | - | chr7.4:3498316-3498335 | None:intergenic | 35.0% | |
| TTCATAGAGAACAAACGGAT+GGG | + | chr7.4:3497188-3497207 | MS.gene78587:CDS | 35.0% | |
| TTGAATTGGAAGATGCTTCT+AGG | + | chr7.4:3498545-3498564 | MS.gene78587:CDS | 35.0% | |
| TTTAATAGGAACAGCTGCAT+GGG | - | chr7.4:3498806-3498825 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | + | chr7.4:3497246-3497265 | MS.gene78587:CDS | 35.0% |
| ! | GGAAAGTTTTACGAAACTGA+TGG | + | chr7.4:3497233-3497252 | MS.gene78587:CDS | 35.0% |
| ! | GTAACATAGCCTTGATACAT+TGG | - | chr7.4:3497977-3497996 | None:intergenic | 35.0% |
| ! | TATCTGGTCTTTCTTATTCC+TGG | + | chr7.4:3498007-3498026 | MS.gene78587:CDS | 35.0% |
| ! | TCTTCATTTGATCCCTTTTC+TGG | - | chr7.4:3498181-3498200 | None:intergenic | 35.0% |
| ! | TGATAGTGATCCAAACAAGA+TGG | + | chr7.4:3498678-3498697 | MS.gene78587:CDS | 35.0% |
| ! | TTGATGATAATCGGATGAAG+AGG | + | chr7.4:3498734-3498753 | MS.gene78587:CDS | 35.0% |
| ! | TTTTAATAGGAACAGCTGCA+TGG | - | chr7.4:3498807-3498826 | None:intergenic | 35.0% |
| !! | AATGGGTATTGATACCAGTT+TGG | + | chr7.4:3498276-3498295 | MS.gene78587:CDS | 35.0% |
| !! | ACCTTGTGATGTTGATTCTT+TGG | + | chr7.4:3499260-3499279 | MS.gene78587:CDS | 35.0% |
| !! | GAAAGGCTTTTGATTGAAGA+TGG | + | chr7.4:3499511-3499530 | MS.gene78587:CDS | 35.0% |
| !! | GACACAAATAGCTTTGTACT+AGG | + | chr7.4:3497125-3497144 | MS.gene78587:CDS | 35.0% |
| !! | TGAATGACAGACATTTTGGT+TGG | - | chr7.4:3498944-3498963 | None:intergenic | 35.0% |
| AAGGAAAGCCATCTGATTTC+AGG | + | chr7.4:3498305-3498324 | MS.gene78587:CDS | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+GGG | + | chr7.4:3498166-3498185 | MS.gene78587:CDS | 40.0% | |
| ACAGATTTCGATGGAACCTT+GGG | - | chr7.4:3499129-3499148 | None:intergenic | 40.0% | |
| AGGAAAGCCATCTGATTTCA+GGG | + | chr7.4:3498306-3498325 | MS.gene78587:CDS | 40.0% | |
| ATCACTGAGAATTCTTCAGG+AGG | + | chr7.4:3498868-3498887 | MS.gene78587:CDS | 40.0% | |
| ATGAAGTCTACTGTTGGACT+TGG | + | chr7.4:3497704-3497723 | MS.gene78587:CDS | 40.0% | |
| CACATCACTGAGAATTCTTC+AGG | + | chr7.4:3498865-3498884 | MS.gene78587:CDS | 40.0% | |
| CAGCTGTTCCTATTAAAAGG+AGG | + | chr7.4:3498809-3498828 | MS.gene78587:CDS | 40.0% | |
| CATTTCTCAACTTGAACGCA+AGG | - | chr7.4:3499084-3499103 | None:intergenic | 40.0% | |
| CGGAGTGCAGGAAATTAAAA+GGG | + | chr7.4:3497270-3497289 | MS.gene78587:CDS | 40.0% | |
| CTGAAGAATTCTCAGTGATG+TGG | - | chr7.4:3498867-3498886 | None:intergenic | 40.0% | |
| CTTGAATTCAGTCCTCGAAT+CGG | + | chr7.4:3496954-3496973 | MS.gene78587:CDS | 40.0% | |
| CTTGTGGAAGCAGTAAGTAT+TGG | + | chr7.4:3497731-3497750 | MS.gene78587:CDS | 40.0% | |
| CTTTCCTTTATGCACCAAAC+TGG | - | chr7.4:3498293-3498312 | None:intergenic | 40.0% | |
| GAAGCTAAGATGCTGATATG+TGG | + | chr7.4:3498634-3498653 | MS.gene78587:CDS | 40.0% | |
| GACATGAATCATTTGCCTCT+AGG | - | chr7.4:3499197-3499216 | None:intergenic | 40.0% | |
| GAGAATTCTTCAGGAGGTTT+GGG | + | chr7.4:3498874-3498893 | MS.gene78587:CDS | 40.0% | |
| GAGATTAACTGCTTGTGTCA+AGG | + | chr7.4:3498831-3498850 | MS.gene78587:CDS | 40.0% | |
| GCAGAATTCGACAAAGTTGA+CGG | + | chr7.4:3498453-3498472 | MS.gene78587:CDS | 40.0% | |
| GCATCTTCCAATTCAACTGA+CGG | - | chr7.4:3498541-3498560 | None:intergenic | 40.0% | |
| GCTGCTGGTGTAAAAGATAA+AGG | + | chr7.4:3498376-3498395 | MS.gene78587:CDS | 40.0% | |
| GTCGACATTTGTTCAGATCA+TGG | + | chr7.4:3499466-3499485 | MS.gene78587:CDS | 40.0% | |
| TACAGATTTCGATGGAACCT+TGG | - | chr7.4:3499130-3499149 | None:intergenic | 40.0% | |
| TCAAAGAAGGAATTTCTGCC+TGG | - | chr7.4:3496989-3497008 | None:intergenic | 40.0% | |
| TCAGTTTGTAAAGTTGAGGC+AGG | + | chr7.4:3498352-3498371 | MS.gene78587:CDS | 40.0% | |
| TCATAGAGAACAAACGGATG+GGG | + | chr7.4:3497189-3497208 | MS.gene78587:CDS | 40.0% | |
| TCGAGGAGAAAACTTGTGAA+AGG | + | chr7.4:3498043-3498062 | MS.gene78587:CDS | 40.0% | |
| TCGGAGTGCAGGAAATTAAA+AGG | + | chr7.4:3497269-3497288 | MS.gene78587:CDS | 40.0% | |
| TCTGAGCAACCAATGTATCA+AGG | + | chr7.4:3497965-3497984 | MS.gene78587:CDS | 40.0% | |
| TGAGAATTCTTCAGGAGGTT+TGG | + | chr7.4:3498873-3498892 | MS.gene78587:CDS | 40.0% | |
| TGAGATTTGTCAGAGACATG+AGG | - | chr7.4:3497365-3497384 | None:intergenic | 40.0% | |
| TGATGATTCACGAAGAATGG+TGG | + | chr7.4:3498612-3498631 | MS.gene78587:CDS | 40.0% | |
| TGGCTTTCAACCATCTTGTT+TGG | - | chr7.4:3498691-3498710 | None:intergenic | 40.0% | |
| TTCTTTAGCAGACAGAAGTG+TGG | + | chr7.4:3499005-3499024 | MS.gene78587:CDS | 40.0% | |
| TTGACGGTCATTGATACCAA+TGG | + | chr7.4:3498469-3498488 | MS.gene78587:CDS | 40.0% | |
| TTGATTGAAGATGGCAGTGT+TGG | + | chr7.4:3499520-3499539 | MS.gene78587:CDS | 40.0% | |
| ! | ACATCACAAGGTGTTCTCAA+AGG | - | chr7.4:3499252-3499271 | None:intergenic | 40.0% |
| ! | AGATGCTCCATAACTTGTGA+AGG | - | chr7.4:3497466-3497485 | None:intergenic | 40.0% |
| ! | AGGTTTGGGATCAGATAAAC+TGG | + | chr7.4:3498888-3498907 | MS.gene78587:CDS | 40.0% |
| ! | ATAGGGAAGAAACTTTTGGC+TGG | + | chr7.4:3497305-3497324 | MS.gene78587:CDS | 40.0% |
| ! | GGTTTGGGATCAGATAAACT+GGG | + | chr7.4:3498889-3498908 | MS.gene78587:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | + | chr7.4:3497250-3497269 | MS.gene78587:CDS | 40.0% |
| ! | TGCAAAGCTCTGTCTTCTTT+TGG | + | chr7.4:3497830-3497849 | MS.gene78587:CDS | 40.0% |
| ! | TTTTCCTTCGGAAAGTCCAT+TGG | - | chr7.4:3498488-3498507 | None:intergenic | 40.0% |
| !! | AGTAAGTATTGGCAAGGAGA+AGG | + | chr7.4:3497742-3497761 | MS.gene78587:CDS | 40.0% |
| !! | CAAAAGTGTCGATCTCTTCT+GGG | + | chr7.4:3497904-3497923 | MS.gene78587:CDS | 40.0% |
| !! | GATACCAGTTTGGTGCATAA+AGG | + | chr7.4:3498286-3498305 | MS.gene78587:CDS | 40.0% |
| !! | GTAAGTATTGGCAAGGAGAA+GGG | + | chr7.4:3497743-3497762 | MS.gene78587:CDS | 40.0% |
| AACCTAGGAAGAACAGTCCT+GGG | + | chr7.4:3497789-3497808 | MS.gene78587:CDS | 45.0% | |
| AATACTCCATGTGACTGGGA+TGG | - | chr7.4:3497102-3497121 | None:intergenic | 45.0% | |
| ACCTTGCTGCAAGGATTGAA+AGG | - | chr7.4:3499420-3499439 | None:intergenic | 45.0% | |
| AGACCAGCTTTCACTTCGAA+CGG | + | chr7.4:3497019-3497038 | MS.gene78587:CDS | 45.0% | |
| AGACCTTACTAGGCTTGATG+TGG | + | chr7.4:3497766-3497785 | MS.gene78587:CDS | 45.0% | |
| ATACTCCATGTGACTGGGAT+GGG | - | chr7.4:3497101-3497120 | None:intergenic | 45.0% | |
| CAATGAGGAAGAGCCAGAAA+AGG | + | chr7.4:3498165-3498184 | MS.gene78587:CDS | 45.0% | |
| CAGCAATACTCCATGTGACT+GGG | - | chr7.4:3497106-3497125 | None:intergenic | 45.0% | |
| CATAGAGAACAAACGGATGG+GGG | + | chr7.4:3497190-3497209 | MS.gene78587:CDS | 45.0% | |
| CTTGTATGAACCTTGCTGCA+AGG | - | chr7.4:3499429-3499448 | None:intergenic | 45.0% | |
| GGAATTTCTGCCTGGTATTC+AGG | - | chr7.4:3496981-3497000 | None:intergenic | 45.0% | |
| GTTCCACATCAAGCCTAGTA+AGG | - | chr7.4:3497772-3497791 | None:intergenic | 45.0% | |
| TCAGCAATACTCCATGTGAC+TGG | - | chr7.4:3497107-3497126 | None:intergenic | 45.0% | |
| TCCTTTCAATCCTTGCAGCA+AGG | + | chr7.4:3499416-3499435 | MS.gene78587:intron | 45.0% | |
| TGCAGCAAGGTTCATACAAG+AGG | + | chr7.4:3499429-3499448 | MS.gene78587:intron | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | + | chr7.4:3497915-3497934 | MS.gene78587:CDS | 45.0% |
| ! | CCAGAAGAGATCGACACTTT+TGG | - | chr7.4:3497906-3497925 | None:intergenic | 45.0% |
| ! | GATACCAATGGACTTTCCGA+AGG | + | chr7.4:3498481-3498500 | MS.gene78587:CDS | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+TGG | - | chr7.4:3499306-3499325 | None:intergenic | 45.0% |
| !! | CCAAAAGTGTCGATCTCTTC+TGG | + | chr7.4:3497903-3497922 | MS.gene78587:CDS | 45.0% |
| !! | GGAAGCAGTAAGTATTGGCA+AGG | + | chr7.4:3497736-3497755 | MS.gene78587:CDS | 45.0% |
| !! | AAAAAGTTATTTAAAAAAAA+AGG | - | chr7.4:3497571-3497590 | None:intergenic | 5.0% |
| ACCTAGGAAGAACAGTCCTG+GGG | + | chr7.4:3497790-3497809 | MS.gene78587:CDS | 50.0% | |
| AGCTGTTTGGCCTCGATTAC+TGG | + | chr7.4:3497928-3497947 | MS.gene78587:CDS | 50.0% | |
| AGGAGAAGGGAGACCTTACT+AGG | + | chr7.4:3497756-3497775 | MS.gene78587:CDS | 50.0% | |
| AGGTAAAAGATCGGGGCTTG+AGG | - | chr7.4:3498234-3498253 | None:intergenic | 50.0% | |
| ATGGAACCTTGGGTCTGTTG+AGG | - | chr7.4:3499119-3499138 | None:intergenic | 50.0% | |
| CAACCTCTTGCCAGTAATCG+AGG | - | chr7.4:3497941-3497960 | None:intergenic | 50.0% | |
| CAATGGGAACCTGTGCTCTA+TGG | + | chr7.4:3497534-3497553 | MS.gene78587:intron | 50.0% | |
| CAGCCGAAATCTTCCTGTCA+AGG | - | chr7.4:3497876-3497895 | None:intergenic | 50.0% | |
| CTAGGCTTGATGTGGAACCT+AGG | + | chr7.4:3497774-3497793 | MS.gene78587:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+CGG | - | chr7.4:3499229-3499248 | None:intergenic | 50.0% | |
| CTCGAAAACTTCTCAACGCC+AGG | - | chr7.4:3498028-3498047 | None:intergenic | 50.0% | |
| CTCGATTACTGGCAAGAGGT+TGG | + | chr7.4:3497939-3497958 | MS.gene78587:CDS | 50.0% | |
| GAACCTAGGAAGAACAGTCC+TGG | + | chr7.4:3497788-3497807 | MS.gene78587:CDS | 50.0% | |
| GATCCGTTCGAAGTGAAAGC+TGG | - | chr7.4:3497025-3497044 | None:intergenic | 50.0% | |
| GATGGGCAAACCTATTGCAG+AGG | - | chr7.4:3497084-3497103 | None:intergenic | 50.0% | |
| GGGGCTTGAGGTAACATTGA+CGG | - | chr7.4:3498222-3498241 | None:intergenic | 50.0% | |
| GTTTGTGCTGAAAATGCCCC+AGG | - | chr7.4:3497809-3497828 | None:intergenic | 50.0% | |
| TATCAGCAGCAGCAGCAGAA+AGG | + | chr7.4:3498970-3498989 | MS.gene78587:CDS | 50.0% | |
| TCGAATCGGTCCTGAATACC+AGG | + | chr7.4:3496968-3496987 | MS.gene78587:CDS | 50.0% | |
| TGGAACCTTGGGTCTGTTGA+GGG | - | chr7.4:3499118-3499137 | None:intergenic | 50.0% | |
| TGTTGGACTTGGCGTTCTTG+TGG | + | chr7.4:3497715-3497734 | MS.gene78587:CDS | 50.0% | |
| TTACACCCTCAACAGACCCA+AGG | + | chr7.4:3499110-3499129 | MS.gene78587:CDS | 50.0% | |
| !! | AGAAACTTTTGGCTGGAGCG+AGG | + | chr7.4:3497312-3497331 | MS.gene78587:CDS | 50.0% |
| !! | CTGGCGTTGAGAAGTTTTCG+AGG | + | chr7.4:3498026-3498045 | MS.gene78587:CDS | 50.0% |
| !! | TGGTATTCAGGACCGATTCG+AGG | - | chr7.4:3496969-3496988 | None:intergenic | 50.0% |
| AGCCGCTCAGGAAGTAGTTG+AGG | + | chr7.4:3499224-3499243 | MS.gene78587:CDS | 55.0% | |
| AGGCCATGCTCACCTTTCTC+TGG | - | chr7.4:3499177-3499196 | None:intergenic | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | + | chr7.4:3497258-3497277 | MS.gene78587:CDS | 55.0% | |
| ATGTCTAGCATCAGCCGCTC+AGG | + | chr7.4:3499212-3499231 | MS.gene78587:CDS | 55.0% | |
| CTGGTATGGCCATAGAGCAC+AGG | - | chr7.4:3497546-3497565 | None:intergenic | 55.0% | |
| GAAAGGTGAGCATGGCCTAG+AGG | + | chr7.4:3499179-3499198 | MS.gene78587:CDS | 55.0% | |
| GTTTGCCCATCCCAGTCACA+TGG | + | chr7.4:3497093-3497112 | MS.gene78587:CDS | 55.0% | |
| TGGCCTCGATTACTGGCAAG+AGG | + | chr7.4:3497935-3497954 | MS.gene78587:CDS | 55.0% | |
| ! | AAAGTTGAGGCAGGTGCTGC+TGG | + | chr7.4:3498361-3498380 | MS.gene78587:CDS | 55.0% |
| GCCCCAGGACTGTTCTTCCT+AGG | - | chr7.4:3497794-3497813 | None:intergenic | 60.0% | |
| GCGCCAGAGAAAGGTGAGCA+TGG | + | chr7.4:3499171-3499190 | MS.gene78587:CDS | 60.0% | |
| !! | ATGGTGACGGCGCCAGAGAA+AGG | + | chr7.4:3499162-3499181 | MS.gene78587:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3496894 | 3499546 | 3496894 | ID=MS.gene78587 |
| chr7.4 | mRNA | 3496894 | 3499546 | 3496894 | ID=MS.gene78587.t1;Parent=MS.gene78587 |
| chr7.4 | exon | 3496894 | 3497400 | 3496894 | ID=MS.gene78587.t1.exon1;Parent=MS.gene78587.t1 |
| chr7.4 | CDS | 3496894 | 3497400 | 3496894 | ID=cds.MS.gene78587.t1;Parent=MS.gene78587.t1 |
| chr7.4 | exon | 3497650 | 3499384 | 3497650 | ID=MS.gene78587.t1.exon2;Parent=MS.gene78587.t1 |
| chr7.4 | CDS | 3497650 | 3499384 | 3497650 | ID=cds.MS.gene78587.t1;Parent=MS.gene78587.t1 |
| chr7.4 | exon | 3499434 | 3499546 | 3499434 | ID=MS.gene78587.t1.exon3;Parent=MS.gene78587.t1 |
| chr7.4 | CDS | 3499434 | 3499546 | 3499434 | ID=cds.MS.gene78587.t1;Parent=MS.gene78587.t1 |
| Gene Sequence |
| Protein sequence |
