Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072542.t1 | RHN78545.1 | 77 | 834 | 170 | 5 | 1 | 819 | 1 | 827 | 0.00E+00 | 1190.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072542.t1 | A0A072VGE3 | 77.0 | 834 | 170 | 5 | 1 | 819 | 13 | 839 | 0.0e+00 | 1190.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050738 | MS.gene072542 | 0.908634 | 1.38E-81 | -1.69E-46 |
| MS.gene054416 | MS.gene072542 | 0.809661 | 1.69E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29350 | MS.gene072542 | PPI |
| MS.gene29352 | MS.gene072542 | PPI |
| MS.gene050738 | MS.gene072542 | PPI |
| MS.gene072542 | MS.gene78588 | PPI |
| MS.gene063225 | MS.gene072542 | PPI |
| MS.gene072542 | MS.gene050890 | PPI |
| MS.gene072542 | MS.gene78586 | PPI |
| MS.gene072542 | MS.gene072485 | PPI |
| MS.gene65461 | MS.gene072542 | PPI |
| MS.gene78587 | MS.gene072542 | PPI |
| MS.gene050893 | MS.gene072542 | PPI |
| MS.gene29351 | MS.gene072542 | PPI |
| MS.gene072542 | MS.gene78584 | PPI |
| MS.gene78585 | MS.gene072542 | PPI |
| MS.gene053360 | MS.gene072542 | PPI |
| MS.gene054416 | MS.gene072542 | PPI |
| MS.gene072542 | MS.gene050892 | PPI |
| MS.gene072542 | MS.gene050942 | PPI |
| MS.gene072484 | MS.gene072542 | PPI |
| MS.gene67159 | MS.gene072542 | PPI |
| MS.gene050889 | MS.gene072542 | PPI |
| MS.gene072542 | MS.gene050891 | PPI |
| MS.gene072542 | MS.gene072482 | PPI |
| MS.gene072481 | MS.gene072542 | PPI |
| MS.gene072483 | MS.gene072542 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072542.t1 | MTR_1g041895 | 81.175 | 834 | 135 | 6 | 1 | 819 | 13 | 839 | 0.0 | 1321 |
| MS.gene072542.t1 | MTR_7g113220 | 69.875 | 800 | 169 | 11 | 1 | 787 | 13 | 753 | 0.0 | 1023 |
| MS.gene072542.t1 | MTR_7g113280 | 67.554 | 789 | 189 | 8 | 1 | 771 | 13 | 752 | 0.0 | 1015 |
| MS.gene072542.t1 | MTR_7g113270 | 68.820 | 805 | 173 | 12 | 1 | 787 | 13 | 757 | 0.0 | 1005 |
| MS.gene072542.t1 | MTR_7g113250 | 73.261 | 460 | 89 | 4 | 1 | 453 | 1 | 433 | 0.0 | 673 |
| MS.gene072542.t1 | MTR_7g113250 | 63.317 | 199 | 62 | 2 | 618 | 806 | 434 | 631 | 3.47e-69 | 241 |
| MS.gene072542.t1 | MTR_7g112390 | 76.957 | 460 | 38 | 2 | 119 | 578 | 1 | 392 | 0.0 | 672 |
| MS.gene072542.t1 | MTR_7g112390 | 85.657 | 251 | 12 | 1 | 567 | 817 | 478 | 704 | 2.44e-132 | 411 |
| MS.gene072542.t1 | MTR_7g108470 | 42.667 | 450 | 213 | 6 | 10 | 415 | 28 | 476 | 1.84e-106 | 349 |
| MS.gene072542.t1 | MTR_4g119630 | 45.504 | 367 | 175 | 6 | 10 | 360 | 40 | 397 | 6.05e-95 | 305 |
| MS.gene072542.t1 | MTR_3g049350 | 79.882 | 169 | 27 | 2 | 292 | 453 | 3 | 171 | 3.72e-83 | 267 |
| MS.gene072542.t1 | MTR_3g049350 | 57.143 | 77 | 32 | 1 | 618 | 694 | 172 | 247 | 7.70e-18 | 84.7 |
| MS.gene072542.t1 | MTR_2g436970 | 35.045 | 331 | 175 | 8 | 14 | 343 | 17 | 308 | 2.22e-58 | 206 |
| MS.gene072542.t1 | MTR_7g113290 | 73.043 | 115 | 30 | 1 | 557 | 671 | 13 | 126 | 1.89e-43 | 160 |
| MS.gene072542.t1 | MTR_4g119640 | 33.621 | 116 | 66 | 3 | 19 | 132 | 27 | 133 | 1.59e-12 | 65.9 |
| MS.gene072542.t1 | MTR_5g007800 | 49.315 | 73 | 26 | 2 | 725 | 797 | 12 | 73 | 2.26e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072542.t1 | AT1G09040 | 43.820 | 445 | 198 | 7 | 11 | 410 | 35 | 472 | 3.99e-109 | 355 |
| MS.gene072542.t1 | AT1G09050 | 43.371 | 445 | 200 | 7 | 11 | 410 | 35 | 472 | 2.63e-106 | 348 |
| MS.gene072542.t1 | AT1G09050 | 43.371 | 445 | 200 | 7 | 11 | 410 | 35 | 472 | 2.63e-106 | 348 |
| MS.gene072542.t1 | AT2G47820 | 40.471 | 467 | 220 | 10 | 6 | 421 | 30 | 489 | 5.97e-101 | 331 |
| MS.gene072542.t1 | AT2G47820 | 40.471 | 467 | 220 | 10 | 6 | 421 | 30 | 489 | 5.97e-101 | 331 |
| MS.gene072542.t1 | AT1G55050 | 42.377 | 446 | 203 | 10 | 14 | 421 | 27 | 456 | 6.65e-98 | 325 |
| MS.gene072542.t1 | AT1G55050 | 42.377 | 446 | 203 | 10 | 14 | 421 | 27 | 456 | 6.65e-98 | 325 |
Find 165 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 7.3:-4040346 | MS.gene072542:CDS |
| CTACTTGGTTTGTTTATGTT+TGG | 0.213716 | 7.3:-4041251 | MS.gene072542:CDS |
| TGACTCTGCTGATTACTAAT+TGG | 0.231314 | 7.3:+4039328 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.3:-4039068 | MS.gene072542:CDS |
| TCTTCGAGCACGAGAATATT+AGG | 0.253225 | 7.3:+4040219 | None:intergenic |
| CCAAATGTAATGATCTCTTC+TGG | 0.254135 | 7.3:-4040434 | MS.gene072542:CDS |
| GTTTCTAGTGCTCTGTCTCC+TGG | 0.283035 | 7.3:+4039024 | None:intergenic |
| TACTTGGTTTGTTTATGTTT+GGG | 0.295382 | 7.3:-4041250 | MS.gene072542:CDS |
| ACTTTACTAACTGAATTTAC+AGG | 0.296069 | 7.3:+4039997 | None:intergenic |
| ATCGCAAGATACTTTGTTAC+AGG | 0.312695 | 7.3:-4041012 | MS.gene072542:intron |
| AGCTGTTTGGCCCCGCTTAT+TGG | 0.313727 | 7.3:-4040409 | MS.gene072542:CDS |
| CAATCACTTTCCTTTGCAAT+TGG | 0.316197 | 7.3:-4041398 | MS.gene072542:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.3:-4040422 | MS.gene072542:CDS |
| CTAATTGGATCACAAACATT+TGG | 0.325977 | 7.3:+4039343 | None:intergenic |
| TGGTACTCATGCCCTATTCT+AGG | 0.331873 | 7.3:+4041503 | None:intergenic |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 7.3:-4040035 | MS.gene072542:CDS |
| ATGCAGTTGATCCTATTAAA+AGG | 0.341204 | 7.3:-4039483 | MS.gene072542:CDS |
| AATCTTTGACCGGAGGATTT+CGG | 0.347413 | 7.3:-4040467 | MS.gene072542:CDS |
| CATGTATTGATTACCGTCAT+TGG | 0.349047 | 7.3:+4039243 | None:intergenic |
| TGCATCATTGAGAATTCTTC+AGG | 0.352473 | 7.3:-4039424 | MS.gene072542:CDS |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.354435 | 7.3:-4040507 | MS.gene072542:CDS |
| TGTCTCCTGGGATTTATATC+AGG | 0.358743 | 7.3:+4039037 | None:intergenic |
| TGAAAATAGCAAAATGATAA+AGG | 0.363910 | 7.3:-4039149 | MS.gene072542:CDS |
| TGAAAGGATCTTTGTGGGTC+TGG | 0.367041 | 7.3:+4038921 | None:intergenic |
| TGAGAATTCTTCAGGAGGTC+TGG | 0.367894 | 7.3:-4039416 | MS.gene072542:CDS |
| TAATTGGATCACAAACATTT+GGG | 0.375096 | 7.3:+4039344 | None:intergenic |
| CATGGTTATTGATACCAGTT+TGG | 0.378866 | 7.3:-4040064 | MS.gene072542:CDS |
| TAAAGATCATATAAAATTCA+TGG | 0.383096 | 7.3:-4040082 | MS.gene072542:CDS |
| CAAGAAGAAAAGCATTTGAT+TGG | 0.384292 | 7.3:-4038818 | MS.gene072542:CDS |
| CCAGAAGAGATCATTACATT+TGG | 0.384833 | 7.3:+4040434 | None:intergenic |
| ATCTTAGCTTCCACCATCAT+TGG | 0.387710 | 7.3:+4039730 | None:intergenic |
| TTTATTGTAGGTAGCAGATC+GGG | 0.388475 | 7.3:+4040101 | None:intergenic |
| TCTTCTTTGAAGTCTATTGT+TGG | 0.388479 | 7.3:-4040639 | MS.gene072542:CDS |
| ACTAGGTTTGGTGTCGAACC+TGG | 0.389475 | 7.3:-4040564 | MS.gene072542:CDS |
| TTGATTTGAGTCCTAGAATA+GGG | 0.416775 | 7.3:-4041514 | MS.gene072542:CDS |
| AAGAGAGACCTTACTAGGTT+TGG | 0.424779 | 7.3:-4040576 | MS.gene072542:CDS |
| TGCCGCAAGGCTCGAACAAA+AGG | 0.426599 | 7.3:-4038893 | MS.gene072542:CDS |
| CTTGATTTGAGTCCTAGAAT+AGG | 0.429697 | 7.3:-4041515 | MS.gene072542:CDS |
| TTGAAGTCTATTGTTGGACT+TGG | 0.435074 | 7.3:-4040633 | MS.gene072542:CDS |
| AGACATCAATTCATGTCAAT+TGG | 0.437759 | 7.3:-4041324 | MS.gene072542:CDS |
| TTTCTAGTGCTCTGTCTCCT+GGG | 0.444972 | 7.3:+4039025 | None:intergenic |
| CCAACATCACAAGGGATTCT+CGG | 0.446123 | 7.3:+4039076 | None:intergenic |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 7.3:-4040606 | MS.gene072542:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.3:+4040363 | None:intergenic |
| CTGGCAGATTGAGTAGCTCC+TGG | 0.448809 | 7.3:-4041298 | MS.gene072542:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 7.3:+4040027 | None:intergenic |
| CAAATGTAATGATCTCTTCT+GGG | 0.451033 | 7.3:-4040433 | MS.gene072542:CDS |
| GAAAAGCATTTGATTGGAGA+TGG | 0.462252 | 7.3:-4038812 | MS.gene072542:CDS |
| CAGATAAACTAGGAATTTCT+CGG | 0.462819 | 7.3:-4039390 | MS.gene072542:CDS |
| CAATGAGAAAGAACCAGAAA+AGG | 0.464058 | 7.3:-4040175 | MS.gene072542:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.3:-4041133 | MS.gene072542:CDS |
| CCGAGAATCCCTTGTGATGT+TGG | 0.466160 | 7.3:-4039076 | MS.gene072542:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 7.3:+4040050 | None:intergenic |
| AGGAGAAGAGAGACCTTACT+AGG | 0.469113 | 7.3:-4040581 | MS.gene072542:CDS |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 7.3:-4041347 | MS.gene072542:CDS |
| TGGTCTTCATAGAGAAAGTA+AGG | 0.471893 | 7.3:-4039776 | MS.gene072542:CDS |
| TTTCAGTTTCAACATGCCTC+AGG | 0.472552 | 7.3:-4039185 | MS.gene072542:CDS |
| CCCGCTTATTGGCAAGAGGT+TGG | 0.473043 | 7.3:-4040398 | MS.gene072542:CDS |
| GAGAATTCTTCAGGAGGTCT+GGG | 0.474898 | 7.3:-4039415 | MS.gene072542:CDS |
| GACAAAAGTTCTTGTTGCCT+CGG | 0.476314 | 7.3:+4041062 | None:intergenic |
| TCATTATGTATCAATGTGAC+TGG | 0.481414 | 7.3:+4041365 | None:intergenic |
| CAGGAGCTACTCAATCTGCC+AGG | 0.486972 | 7.3:+4041299 | None:intergenic |
| AAGGATTGAAAGGATCTTTG+TGG | 0.490321 | 7.3:+4038915 | None:intergenic |
| TGTTGGACTTGGTGTTCTTG+TGG | 0.492469 | 7.3:-4040622 | MS.gene072542:CDS |
| CCAACCTCTTGCCAATAAGC+GGG | 0.493049 | 7.3:+4040398 | None:intergenic |
| CTGCTCTGATTTCTTAAGCA+TGG | 0.494102 | 7.3:+4041466 | None:intergenic |
| TCAGGTGTCTAAGTCATTTG+TGG | 0.494888 | 7.3:-4040691 | MS.gene072542:intron |
| TAGAATAGGGCATGAGTACC+AGG | 0.495777 | 7.3:-4041501 | MS.gene072542:CDS |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 7.3:-4040057 | MS.gene072542:CDS |
| GCCAACCTCTTGCCAATAAG+CGG | 0.499224 | 7.3:+4040397 | None:intergenic |
| ATATGTCTAAAAGCATTAAA+CGG | 0.500870 | 7.3:-4039921 | MS.gene072542:CDS |
| TTTGCTCAGCCGAAATCCTC+CGG | 0.501641 | 7.3:+4040458 | None:intergenic |
| TGGATCACAAACATTTGGGT+TGG | 0.502365 | 7.3:+4039348 | None:intergenic |
| TTGTGTATCCGCATCACTCC+AGG | 0.502846 | 7.3:+4041280 | None:intergenic |
| GGAGCATCTTCTGATTCAAC+GGG | 0.506307 | 7.3:+4039811 | None:intergenic |
| GTTCGACACCAAACCTAGTA+AGG | 0.507637 | 7.3:+4040568 | None:intergenic |
| TGCACAGCTTCTGAATCAGC+AGG | 0.507765 | 7.3:+4041425 | None:intergenic |
| AGGATTGAAAGGATCTTTGT+GGG | 0.514560 | 7.3:+4038916 | None:intergenic |
| ATCGTCATTGTTCAGATCAC+GGG | 0.522866 | 7.3:-4038856 | MS.gene072542:CDS |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 7.3:-4038999 | MS.gene072542:CDS |
| GCCCCACGACTGTTCTTCCC+AGG | 0.523209 | 7.3:+4040546 | None:intergenic |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.3:+4040312 | None:intergenic |
| CTTTATTGTAGGTAGCAGAT+CGG | 0.523420 | 7.3:+4040100 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.528556 | 7.3:-4041145 | MS.gene072542:CDS |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.3:-4040294 | MS.gene072542:CDS |
| ACCTGATCTTACTCTCCGAT+TGG | 0.529963 | 7.3:+4039516 | None:intergenic |
| AGCAGACAGAAGCTTGGAAG+AGG | 0.533341 | 7.3:-4039287 | MS.gene072542:CDS |
| TTCTTCAGCAGACAGAAGCT+TGG | 0.535359 | 7.3:-4039293 | MS.gene072542:CDS |
| TCACGAAGCATCAGTCCAAT+CGG | 0.535452 | 7.3:-4039531 | MS.gene072542:CDS |
| AGACAGAAGCTTGGAAGAGG+AGG | 0.535920 | 7.3:-4039284 | MS.gene072542:CDS |
| AATGAGAAAGAACCAGAAAA+GGG | 0.538329 | 7.3:-4040174 | MS.gene072542:CDS |
| TTCTTAGAGAACAAATCGAT+GGG | 0.539496 | 7.3:-4041203 | MS.gene072542:CDS |
| CTCGAAGAAGAAGCTAAAGT+TGG | 0.542576 | 7.3:-4040204 | MS.gene072542:CDS |
| TCTGATTTCTTAAGCATGGA+AGG | 0.545252 | 7.3:+4041470 | None:intergenic |
| CTATTCTAGGACTCAAATCA+AGG | 0.545701 | 7.3:+4041516 | None:intergenic |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.546113 | 7.3:-4040612 | MS.gene072542:CDS |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.546342 | 7.3:-4039104 | MS.gene072542:CDS |
| TCCTTTCAATCCTTGCCGCA+AGG | 0.548859 | 7.3:-4038906 | MS.gene072542:CDS |
| TTTGTTCGAGCCTTGCGGCA+AGG | 0.549687 | 7.3:+4038896 | None:intergenic |
| GCCTTGCGGCAAGGATTGAA+AGG | 0.549774 | 7.3:+4038905 | None:intergenic |
| AACTGATGATTCGCCAATGA+TGG | 0.550833 | 7.3:-4039743 | MS.gene072542:CDS |
| AGGAGCATCTTCTGATTCAA+CGG | 0.551120 | 7.3:+4039810 | None:intergenic |
| ATTCTTAGAGAACAAATCGA+TGG | 0.554399 | 7.3:-4041204 | MS.gene072542:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 7.3:-4040034 | MS.gene072542:CDS |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 7.3:-4040601 | MS.gene072542:CDS |
| CATCGTCATTGTTCAGATCA+CGG | 0.563807 | 7.3:-4038857 | MS.gene072542:CDS |
| CTAGGTTTGGTGTCGAACCT+GGG | 0.565438 | 7.3:-4040563 | MS.gene072542:CDS |
| ATGTCTAACAGCTGCCACTC+AGG | 0.567399 | 7.3:-4039116 | MS.gene072542:CDS |
| AGGAGCTACTCAATCTGCCA+GGG | 0.569582 | 7.3:+4041300 | None:intergenic |
| TGTATCAATGTGACTGGGAT+GGG | 0.571927 | 7.3:+4041371 | None:intergenic |
| TGGCCCCGCTTATTGGCAAG+AGG | 0.575906 | 7.3:-4040402 | MS.gene072542:CDS |
| GAAATAATACAATCTTTGAC+CGG | 0.578933 | 7.3:-4040477 | MS.gene072542:CDS |
| ATGGAGCATGCGTCTCATGA+AGG | 0.580686 | 7.3:-4041539 | MS.gene072542:CDS |
| AATTCATGTCAATTGGCCCC+TGG | 0.580761 | 7.3:-4041317 | MS.gene072542:CDS |
| TCCAATCGGAGAGTAAGATC+AGG | 0.583223 | 7.3:-4039517 | MS.gene072542:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 7.3:+4038998 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.587239 | 7.3:+4039067 | None:intergenic |
| AAAGTTGATGTAGATGCTGC+TGG | 0.592230 | 7.3:-4039979 | MS.gene072542:CDS |
| GATGCTCCTACTGCTACTAC+TGG | 0.592956 | 7.3:-4039796 | MS.gene072542:CDS |
| AGATACACCTCTGCGACTGT+TGG | 0.594249 | 7.3:+4039675 | None:intergenic |
| AGGTAGCAGATCGGGGCTTG+AGG | 0.598766 | 7.3:+4040109 | None:intergenic |
| TGAAGACCAGTAGTAGCAGT+AGG | 0.600187 | 7.3:+4039790 | None:intergenic |
| AAAGATTGTATTATTTCACT+CGG | 0.605641 | 7.3:+4040483 | None:intergenic |
| TGATGATTCGCCAATGATGG+TGG | 0.608648 | 7.3:-4039740 | MS.gene072542:CDS |
| TGATACTGATGCAAACAAGA+TGG | 0.608686 | 7.3:-4039611 | MS.gene072542:CDS |
| ATGTATCAATGTGACTGGGA+TGG | 0.609324 | 7.3:+4041370 | None:intergenic |
| AACCTGGGAAGAACAGTCGT+GGG | 0.612237 | 7.3:-4040548 | MS.gene072542:CDS |
| TCAGAATTCGATGGAACCTG+AGG | 0.615327 | 7.3:+4039169 | None:intergenic |
| TTTGCTCAAGACATCACTAA+CGG | 0.620063 | 7.3:+4040254 | None:intergenic |
| GAACCTGGGAAGAACAGTCG+TGG | 0.620087 | 7.3:-4040549 | MS.gene072542:CDS |
| TTGATGATAATCAAGTGAAG+AGG | 0.620879 | 7.3:-4039555 | MS.gene072542:CDS |
| TTGATACATAATGAAGAGTG+TGG | 0.621005 | 7.3:-4041356 | MS.gene072542:CDS |
| GAGGAAAGTAAACCATGGCA+AGG | 0.627561 | 7.3:-4039944 | MS.gene072542:CDS |
| GACAGCCTGATATAAATCCC+AGG | 0.628120 | 7.3:-4039042 | MS.gene072542:CDS |
| GAGATTGACTGATTGTGCCA+AGG | 0.628845 | 7.3:-4039458 | MS.gene072542:CDS |
| ATCATTGAGAATTCTTCAGG+AGG | 0.629495 | 7.3:-4039421 | MS.gene072542:CDS |
| TTATTGTAGGTAGCAGATCG+GGG | 0.634121 | 7.3:+4040102 | None:intergenic |
| TGAGTGGCAGCTGTTAGACA+TGG | 0.636795 | 7.3:+4039118 | None:intergenic |
| ATAATACAATCTTTGACCGG+AGG | 0.640323 | 7.3:-4040474 | MS.gene072542:CDS |
| GAAGACAAAGCTTTGCAATG+TGG | 0.642154 | 7.3:+4040513 | None:intergenic |
| GCATCTTCTGATTCAACGGG+CGG | 0.643453 | 7.3:+4039814 | None:intergenic |
| CAACCTCTTGCCAATAAGCG+GGG | 0.645022 | 7.3:+4040399 | None:intergenic |
| GATGGGTAAGCCAATTGCAA+AGG | 0.645390 | 7.3:+4041388 | None:intergenic |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.3:-4041141 | MS.gene072542:CDS |
| CATTATGTATCAATGTGACT+GGG | 0.646100 | 7.3:+4041366 | None:intergenic |
| GTAGATGGTCGGAGTGCAGG+AGG | 0.647585 | 7.3:-4041130 | MS.gene072542:CDS |
| GAGTAGCTCCTGGAGTGATG+CGG | 0.647768 | 7.3:-4041288 | MS.gene072542:CDS |
| GCATGGAAGGAATTTCCACC+TGG | 0.654334 | 7.3:+4041483 | None:intergenic |
| GGTGTCTAAGTCATTTGTGG+AGG | 0.657517 | 7.3:-4040688 | MS.gene072542:CDS |
| GGTCTGGGATCAGATAAACT+AGG | 0.658935 | 7.3:-4039400 | MS.gene072542:CDS |
| AATAAAACCAACAGTCGCAG+AGG | 0.660971 | 7.3:-4039682 | MS.gene072542:CDS |
| CGCAGAGGTGTATCTAACTG+TGG | 0.661071 | 7.3:-4039667 | MS.gene072542:CDS |
| CTTAGAGAACAAATCGATGG+GGG | 0.664727 | 7.3:-4041201 | MS.gene072542:CDS |
| GGAGCTACTCAATCTGCCAG+GGG | 0.669247 | 7.3:+4041301 | None:intergenic |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 7.3:+4039102 | None:intergenic |
| CAGTTGATCCTATTAAAAGG+AGG | 0.674014 | 7.3:-4039480 | MS.gene072542:CDS |
| TCTTAGAGAACAAATCGATG+GGG | 0.679364 | 7.3:-4041202 | MS.gene072542:CDS |
| TTGATTATCATCAAACACAC+AGG | 0.682319 | 7.3:+4039564 | None:intergenic |
| CATACGAGGAAAGTAAACCA+TGG | 0.695508 | 7.3:-4039949 | MS.gene072542:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.3:-4040372 | MS.gene072542:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 7.3:-4040054 | MS.gene072542:CDS |
| ACCTGGGAAGAACAGTCGTG+GGG | 0.700618 | 7.3:-4040547 | MS.gene072542:CDS |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.3:+4039068 | None:intergenic |
| AATAGGGCATGAGTACCAGG+TGG | 0.731216 | 7.3:-4041498 | MS.gene072542:CDS |
| ACATCACAAGGGATTCTCGG+AGG | 0.749240 | 7.3:+4039079 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGATCATATAAAATTCA+TGG | - | chr7.3:4040256-4040275 | MS.gene072542:CDS | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | + | chr7.3:4040252-4040271 | None:intergenic | 15.0% |
| !! | AAAGATTGTATTATTTCACT+CGG | + | chr7.3:4039858-4039877 | None:intergenic | 20.0% |
| !! | AAGAAAAACCAAATAATCTT+TGG | + | chr7.3:4040003-4040022 | None:intergenic | 20.0% |
| !! | TGAAAATAGCAAAATGATAA+AGG | - | chr7.3:4041189-4041208 | MS.gene072542:CDS | 20.0% |
| !!! | ATATGTCTAAAAGCATTAAA+CGG | - | chr7.3:4040417-4040436 | MS.gene072542:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | + | chr7.3:4040000-4040019 | None:intergenic | 25.0% |
| ! | AATAGAGGTTCAAATAATCA+TGG | + | chr7.3:4039532-4039551 | None:intergenic | 25.0% |
| ! | ACTTTACTAACTGAATTTAC+AGG | + | chr7.3:4040344-4040363 | None:intergenic | 25.0% |
| ! | CTTTGTGTATATTTATACTC+AGG | - | chr7.3:4039629-4039648 | MS.gene072542:CDS | 25.0% |
| ! | GAAATAATACAATCTTTGAC+CGG | - | chr7.3:4039861-4039880 | MS.gene072542:CDS | 25.0% |
| ! | GTATAAATATACACAAAGTG+AGG | + | chr7.3:4039627-4039646 | None:intergenic | 25.0% |
| ! | TAATTGGATCACAAACATTT+GGG | + | chr7.3:4040997-4041016 | None:intergenic | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | + | chr7.3:4039561-4039580 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | - | chr7.3:4039159-4039178 | MS.gene072542:CDS | 25.0% |
| !!! | ATCATATGCTTCTTTTTTAC+TGG | + | chr7.3:4040702-4040721 | None:intergenic | 25.0% |
| !!! | TACTTGGTTTGTTTATGTTT+GGG | - | chr7.3:4039088-4039107 | MS.gene072542:CDS | 25.0% |
| !!! | TATTTGGTTTTTCTTATTCC+TGG | - | chr7.3:4040008-4040027 | MS.gene072542:CDS | 25.0% |
| AATGAGAAAGAACCAGAAAA+GGG | - | chr7.3:4040164-4040183 | MS.gene072542:CDS | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | - | chr7.3:4039014-4039033 | MS.gene072542:CDS | 30.0% | |
| ATGCAGTTGATCCTATTAAA+AGG | - | chr7.3:4040855-4040874 | MS.gene072542:intron | 30.0% | |
| ATTCTTAGAGAACAAATCGA+TGG | - | chr7.3:4039134-4039153 | MS.gene072542:CDS | 30.0% | |
| CAAATGTAATGATCTCTTCT+GGG | - | chr7.3:4039905-4039924 | MS.gene072542:CDS | 30.0% | |
| CAATAAAAGGATAACTCACT+CGG | + | chr7.3:4039502-4039521 | None:intergenic | 30.0% | |
| CAGATAAACTAGGAATTTCT+CGG | - | chr7.3:4040948-4040967 | MS.gene072542:intron | 30.0% | |
| CATTATGTATCAATGTGACT+GGG | + | chr7.3:4038975-4038994 | None:intergenic | 30.0% | |
| CTAATTGGATCACAAACATT+TGG | + | chr7.3:4040998-4041017 | None:intergenic | 30.0% | |
| GGTGTGATGTAATGAAAAAA+AGG | + | chr7.3:4039567-4039586 | None:intergenic | 30.0% | |
| TCATGGTACATCACAATAAA+AGG | + | chr7.3:4039515-4039534 | None:intergenic | 30.0% | |
| TCATTATGTATCAATGTGAC+TGG | + | chr7.3:4038976-4038995 | None:intergenic | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | - | chr7.3:4039992-4040011 | MS.gene072542:CDS | 30.0% | |
| TTCTTAGAGAACAAATCGAT+GGG | - | chr7.3:4039135-4039154 | MS.gene072542:CDS | 30.0% | |
| TTGATACATAATGAAGAGTG+TGG | - | chr7.3:4038982-4039001 | MS.gene072542:CDS | 30.0% | |
| TTGATTATCATCAAACACAC+AGG | + | chr7.3:4040777-4040796 | None:intergenic | 30.0% | |
| ! | GATACACAAAGTTTTCTACT+TGG | - | chr7.3:4039072-4039091 | MS.gene072542:CDS | 30.0% |
| ! | TTGATGATAATCAAGTGAAG+AGG | - | chr7.3:4040783-4040802 | MS.gene072542:intron | 30.0% |
| ! | TTGATTTGAGTCCTAGAATA+GGG | - | chr7.3:4038824-4038843 | MS.gene072542:CDS | 30.0% |
| ! | TTTTCTGTCAGAAAGTCTAT+TGG | + | chr7.3:4040471-4040490 | None:intergenic | 30.0% |
| !! | ATGAAAAAAAGGTACTGGTA+TGG | + | chr7.3:4039556-4039575 | None:intergenic | 30.0% |
| !! | CAAGAAGAAAAGCATTTGAT+TGG | - | chr7.3:4041520-4041539 | MS.gene072542:CDS | 30.0% |
| !! | CTACTTGGTTTGTTTATGTT+TGG | - | chr7.3:4039087-4039106 | MS.gene072542:CDS | 30.0% |
| !! | GAAAAAAGCATTTCCAATGA+CGG | - | chr7.3:4041082-4041101 | MS.gene072542:CDS | 30.0% |
| !! | TCTTCTTTGAAGTCTATTGT+TGG | - | chr7.3:4039699-4039718 | MS.gene072542:CDS | 30.0% |
| !! | TGAAAAAAAGGTACTGGTAT+GGG | + | chr7.3:4039555-4039574 | None:intergenic | 30.0% |
| !!! | TTGCTATTTTCAGAATTCGA+TGG | + | chr7.3:4041181-4041200 | None:intergenic | 30.0% |
| AAACATGAGATGAGATGAGA+TGG | + | chr7.3:4039364-4039383 | None:intergenic | 35.0% | |
| AAGGATTGAAAGGATCTTTG+TGG | + | chr7.3:4041426-4041445 | None:intergenic | 35.0% | |
| AGGATTGAAAGGATCTTTGT+GGG | + | chr7.3:4041425-4041444 | None:intergenic | 35.0% | |
| ATAATACAATCTTTGACCGG+AGG | - | chr7.3:4039864-4039883 | MS.gene072542:CDS | 35.0% | |
| ATCATTGAGAATTCTTCAGG+AGG | - | chr7.3:4040917-4040936 | MS.gene072542:intron | 35.0% | |
| ATCGCAAGATACTTTGTTAC+AGG | - | chr7.3:4039326-4039345 | MS.gene072542:CDS | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | - | chr7.3:4040281-4040300 | MS.gene072542:CDS | 35.0% | |
| CAATCACTTTCCTTTGCAAT+TGG | - | chr7.3:4038940-4038959 | MS.gene072542:CDS | 35.0% | |
| CAATGAGAAAGAACCAGAAA+AGG | - | chr7.3:4040163-4040182 | MS.gene072542:CDS | 35.0% | |
| CAGTTGATCCTATTAAAAGG+AGG | - | chr7.3:4040858-4040877 | MS.gene072542:intron | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.3:4040274-4040293 | MS.gene072542:CDS | 35.0% | |
| CCAAATGTAATGATCTCTTC+TGG | - | chr7.3:4039904-4039923 | MS.gene072542:CDS | 35.0% | |
| CCAGAAGAGATCATTACATT+TGG | + | chr7.3:4039907-4039926 | None:intergenic | 35.0% | |
| CTTTATTGTAGGTAGCAGAT+CGG | + | chr7.3:4040241-4040260 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.3:4040044-4040063 | MS.gene072542:CDS | 35.0% | |
| TCTGATTTCTTAAGCATGGA+AGG | + | chr7.3:4038871-4038890 | None:intergenic | 35.0% | |
| TCTTAGAGAACAAATCGATG+GGG | - | chr7.3:4039136-4039155 | MS.gene072542:CDS | 35.0% | |
| TGATACTGATGCAAACAAGA+TGG | - | chr7.3:4040727-4040746 | MS.gene072542:intron | 35.0% | |
| TGCATCATTGAGAATTCTTC+AGG | - | chr7.3:4040914-4040933 | MS.gene072542:intron | 35.0% | |
| TGGTCTTCATAGAGAAAGTA+AGG | - | chr7.3:4040562-4040581 | MS.gene072542:CDS | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | + | chr7.3:4040314-4040333 | None:intergenic | 35.0% | |
| TTGAAGTCTATTGTTGGACT+TGG | - | chr7.3:4039705-4039724 | MS.gene072542:CDS | 35.0% | |
| TTTATTGTAGGTAGCAGATC+GGG | + | chr7.3:4040240-4040259 | None:intergenic | 35.0% | |
| TTTGCTCAAGACATCACTAA+CGG | + | chr7.3:4040087-4040106 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | - | chr7.3:4039193-4039212 | MS.gene072542:CDS | 35.0% |
| ! | AATGAAGAGTGTGGATATCA+TGG | - | chr7.3:4038991-4039010 | MS.gene072542:CDS | 35.0% |
| ! | ACAGGACAGAAACTTTTTAC+TGG | - | chr7.3:4039252-4039271 | MS.gene072542:CDS | 35.0% |
| ! | CTTGATTTGAGTCCTAGAAT+AGG | - | chr7.3:4038823-4038842 | MS.gene072542:CDS | 35.0% |
| ! | GGAGAGTTTTACAAAACTGA+TGG | - | chr7.3:4039180-4039199 | MS.gene072542:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | + | chr7.3:4040869-4040888 | None:intergenic | 35.0% |
| ! | TCATCATTTGATCCCTTTTC+TGG | + | chr7.3:4040179-4040198 | None:intergenic | 35.0% |
| ! | TGACTCTGCTGATTACTAAT+TGG | + | chr7.3:4041013-4041032 | None:intergenic | 35.0% |
| ! | TTTTAGACATATCCTTGCCA+TGG | + | chr7.3:4040409-4040428 | None:intergenic | 35.0% |
| !! | CATGTATTGATTACCGTCAT+TGG | + | chr7.3:4041098-4041117 | None:intergenic | 35.0% |
| !! | CTATTCTAGGACTCAAATCA+AGG | + | chr7.3:4038825-4038844 | None:intergenic | 35.0% |
| !! | GAAAAGCATTTGATTGGAGA+TGG | - | chr7.3:4041526-4041545 | MS.gene072542:CDS | 35.0% |
| AACTGATGATTCGCCAATGA+TGG | - | chr7.3:4040595-4040614 | MS.gene072542:CDS | 40.0% | |
| AAGAGAGACCTTACTAGGTT+TGG | - | chr7.3:4039762-4039781 | MS.gene072542:CDS | 40.0% | |
| AATAAAACCAACAGTCGCAG+AGG | - | chr7.3:4040656-4040675 | MS.gene072542:CDS | 40.0% | |
| AATCTTTGACCGGAGGATTT+CGG | - | chr7.3:4039871-4039890 | MS.gene072542:CDS | 40.0% | |
| ATCGTCATTGTTCAGATCAC+GGG | - | chr7.3:4041482-4041501 | MS.gene072542:CDS | 40.0% | |
| ATCTTAGCTTCCACCATCAT+TGG | + | chr7.3:4040611-4040630 | None:intergenic | 40.0% | |
| ATGTATCAATGTGACTGGGA+TGG | + | chr7.3:4038971-4038990 | None:intergenic | 40.0% | |
| CATACGAGGAAAGTAAACCA+TGG | - | chr7.3:4040389-4040408 | MS.gene072542:CDS | 40.0% | |
| CATCGTCATTGTTCAGATCA+CGG | - | chr7.3:4041481-4041500 | MS.gene072542:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | + | chr7.3:4041273-4041292 | None:intergenic | 40.0% | |
| CTCGAAGAAGAAGCTAAAGT+TGG | - | chr7.3:4040134-4040153 | MS.gene072542:CDS | 40.0% | |
| CTGCTCTGATTTCTTAAGCA+TGG | + | chr7.3:4038875-4038894 | None:intergenic | 40.0% | |
| CTGCTGGTAAAAAACATACG+AGG | - | chr7.3:4040375-4040394 | MS.gene072542:CDS | 40.0% | |
| CTTAGAGAACAAATCGATGG+GGG | - | chr7.3:4039137-4039156 | MS.gene072542:CDS | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | + | chr7.3:4040029-4040048 | None:intergenic | 40.0% | |
| GAAGACAAAGCTTTGCAATG+TGG | + | chr7.3:4039828-4039847 | None:intergenic | 40.0% | |
| GACAAAAGTTCTTGTTGCCT+CGG | + | chr7.3:4039279-4039298 | None:intergenic | 40.0% | |
| GCTCTGTGCATTTGATACAA+TGG | - | chr7.3:4039459-4039478 | MS.gene072542:CDS | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.3:4039978-4039997 | None:intergenic | 40.0% | |
| TCAGGTGTCTAAGTCATTTG+TGG | - | chr7.3:4039647-4039666 | MS.gene072542:CDS | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | + | chr7.3:4041274-4041293 | None:intergenic | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | + | chr7.3:4041343-4041362 | None:intergenic | 40.0% | |
| TCTTCGAGCACGAGAATATT+AGG | + | chr7.3:4040122-4040141 | None:intergenic | 40.0% | |
| TGGATCACAAACATTTGGGT+TGG | + | chr7.3:4040993-4041012 | None:intergenic | 40.0% | |
| TGTATCAATGTGACTGGGAT+GGG | + | chr7.3:4038970-4038989 | None:intergenic | 40.0% | |
| TGTCTCCTGGGATTTATATC+AGG | + | chr7.3:4041304-4041323 | None:intergenic | 40.0% | |
| TTATTGTAGGTAGCAGATCG+GGG | + | chr7.3:4040239-4040258 | None:intergenic | 40.0% | |
| TTTCAGTTTCAACATGCCTC+AGG | - | chr7.3:4041153-4041172 | MS.gene072542:CDS | 40.0% | |
| ! | AGAAACTTTTTACTGGACCG+AGG | - | chr7.3:4039259-4039278 | MS.gene072542:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | - | chr7.3:4039197-4039216 | MS.gene072542:CDS | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.3:4039831-4039850 | MS.gene072542:CDS | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | - | chr7.3:4040359-4040378 | MS.gene072542:CDS | 40.0% |
| !! | AGGAGCATCTTCTGATTCAA+CGG | + | chr7.3:4040531-4040550 | None:intergenic | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | - | chr7.3:4040027-4040046 | MS.gene072542:CDS | 40.0% |
| !!! | CACAGGCGTGTTGATTTTTA+TGG | + | chr7.3:4040760-4040779 | None:intergenic | 40.0% |
| AATTCATGTCAATTGGCCCC+TGG | - | chr7.3:4039021-4039040 | MS.gene072542:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | - | chr7.3:4041339-4041358 | MS.gene072542:CDS | 45.0% | |
| ACCTGATCTTACTCTCCGAT+TGG | + | chr7.3:4040825-4040844 | None:intergenic | 45.0% | |
| AGGAGAAGAGAGACCTTACT+AGG | - | chr7.3:4039757-4039776 | MS.gene072542:CDS | 45.0% | |
| CCAACATCACAAGGGATTCT+CGG | + | chr7.3:4041265-4041284 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | - | chr7.3:4040304-4040323 | MS.gene072542:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | - | chr7.3:4039732-4039751 | MS.gene072542:CDS | 45.0% | |
| GACAGCCTGATATAAATCCC+AGG | - | chr7.3:4041296-4041315 | MS.gene072542:CDS | 45.0% | |
| GAGAATTCTTCAGGAGGTCT+GGG | - | chr7.3:4040923-4040942 | MS.gene072542:intron | 45.0% | |
| GAGATTGACTGATTGTGCCA+AGG | - | chr7.3:4040880-4040899 | MS.gene072542:intron | 45.0% | |
| GAGGAAAGTAAACCATGGCA+AGG | - | chr7.3:4040394-4040413 | MS.gene072542:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | - | chr7.3:4040284-4040303 | MS.gene072542:CDS | 45.0% | |
| GATGGGTAAGCCAATTGCAA+AGG | + | chr7.3:4038953-4038972 | None:intergenic | 45.0% | |
| GGTGTCTAAGTCATTTGTGG+AGG | - | chr7.3:4039650-4039669 | MS.gene072542:CDS | 45.0% | |
| GTTCGACACCAAACCTAGTA+AGG | + | chr7.3:4039773-4039792 | None:intergenic | 45.0% | |
| TAGAATAGGGCATGAGTACC+AGG | - | chr7.3:4038837-4038856 | MS.gene072542:CDS | 45.0% | |
| TCAGAATTCGATGGAACCTG+AGG | + | chr7.3:4041172-4041191 | None:intergenic | 45.0% | |
| TCCAATCGGAGAGTAAGATC+AGG | - | chr7.3:4040821-4040840 | MS.gene072542:intron | 45.0% | |
| TGAAAGGATCTTTGTGGGTC+TGG | + | chr7.3:4041420-4041439 | None:intergenic | 45.0% | |
| TGAAGACCAGTAGTAGCAGT+AGG | + | chr7.3:4040551-4040570 | None:intergenic | 45.0% | |
| TGAGAATTCTTCAGGAGGTC+TGG | - | chr7.3:4040922-4040941 | MS.gene072542:intron | 45.0% | |
| TGATGATTCGCCAATGATGG+TGG | - | chr7.3:4040598-4040617 | MS.gene072542:CDS | 45.0% | |
| TGGTACTCATGCCCTATTCT+AGG | + | chr7.3:4038838-4038857 | None:intergenic | 45.0% | |
| TTCTTCAGCAGACAGAAGCT+TGG | - | chr7.3:4041045-4041064 | MS.gene072542:CDS | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.3:4039916-4039935 | MS.gene072542:CDS | 45.0% |
| ! | GATGCAGCTTTTCTCTTCCT+TGG | + | chr7.3:4040900-4040919 | None:intergenic | 45.0% |
| ! | GGAGCATCTTCTGATTCAAC+GGG | + | chr7.3:4040530-4040549 | None:intergenic | 45.0% |
| ! | GGTCTGGGATCAGATAAACT+AGG | - | chr7.3:4040938-4040957 | MS.gene072542:intron | 45.0% |
| ! | TCACGAAGCATCAGTCCAAT+CGG | - | chr7.3:4040807-4040826 | MS.gene072542:intron | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+GGG | + | chr7.3:4041316-4041335 | None:intergenic | 45.0% |
| !! | AGGTACTGGTATGGGAATAG+AGG | + | chr7.3:4039547-4039566 | None:intergenic | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | - | chr7.3:4041270-4041289 | MS.gene072542:CDS | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | - | chr7.3:4039737-4039756 | MS.gene072542:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.3:4039966-4039985 | MS.gene072542:CDS | 45.0% |
| !! | TGTTGGACTTGGTGTTCTTG+TGG | - | chr7.3:4039716-4039735 | MS.gene072542:CDS | 45.0% |
| AAAGGGGGGAAACGTATGAC+AGG | - | chr7.3:4039234-4039253 | MS.gene072542:CDS | 50.0% | |
| AACCTGGGAAGAACAGTCGT+GGG | - | chr7.3:4039790-4039809 | MS.gene072542:CDS | 50.0% | |
| AATAGGGCATGAGTACCAGG+TGG | - | chr7.3:4038840-4038859 | MS.gene072542:CDS | 50.0% | |
| ACATCACAAGGGATTCTCGG+AGG | + | chr7.3:4041262-4041281 | None:intergenic | 50.0% | |
| AGACAGAAGCTTGGAAGAGG+AGG | - | chr7.3:4041054-4041073 | MS.gene072542:CDS | 50.0% | |
| AGATACACCTCTGCGACTGT+TGG | + | chr7.3:4040666-4040685 | None:intergenic | 50.0% | |
| AGCAGACAGAAGCTTGGAAG+AGG | - | chr7.3:4041051-4041070 | MS.gene072542:CDS | 50.0% | |
| AGGAGCTACTCAATCTGCCA+GGG | + | chr7.3:4039041-4039060 | None:intergenic | 50.0% | |
| AGTGCAGGAGGAAAAAAGGG+GGG | - | chr7.3:4039220-4039239 | MS.gene072542:CDS | 50.0% | |
| ATGGAGCATGCGTCTCATGA+AGG | - | chr7.3:4038799-4038818 | MS.gene072542:CDS | 50.0% | |
| ATGTCTAACAGCTGCCACTC+AGG | - | chr7.3:4041222-4041241 | MS.gene072542:CDS | 50.0% | |
| CAACCTCTTGCCAATAAGCG+GGG | + | chr7.3:4039942-4039961 | None:intergenic | 50.0% | |
| CACACACACACACACACAAC+TGG | + | chr7.3:4039588-4039607 | None:intergenic | 50.0% | |
| CCAACCTCTTGCCAATAAGC+GGG | + | chr7.3:4039943-4039962 | None:intergenic | 50.0% | |
| CCGAGAATCCCTTGTGATGT+TGG | - | chr7.3:4041262-4041281 | MS.gene072542:CDS | 50.0% | |
| CGGAGTGCAGGAGGAAAAAA+GGG | - | chr7.3:4039217-4039236 | MS.gene072542:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | + | chr7.3:4041239-4041258 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | + | chr7.3:4040291-4040310 | None:intergenic | 50.0% | |
| GAGTGCAGGAGGAAAAAAGG+GGG | - | chr7.3:4039219-4039238 | MS.gene072542:CDS | 50.0% | |
| GATGCTCCTACTGCTACTAC+TGG | - | chr7.3:4040542-4040561 | MS.gene072542:CDS | 50.0% | |
| GCATCTTCTGATTCAACGGG+CGG | + | chr7.3:4040527-4040546 | None:intergenic | 50.0% | |
| GCATGGAAGGAATTTCCACC+TGG | + | chr7.3:4038858-4038877 | None:intergenic | 50.0% | |
| GCCAACCTCTTGCCAATAAG+CGG | + | chr7.3:4039944-4039963 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | - | chr7.3:4040303-4040322 | MS.gene072542:CDS | 50.0% | |
| GGAGTGCAGGAGGAAAAAAG+GGG | - | chr7.3:4039218-4039237 | MS.gene072542:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | - | chr7.3:4039726-4039745 | MS.gene072542:CDS | 50.0% | |
| TCCTTTCAATCCTTGCCGCA+AGG | - | chr7.3:4041432-4041451 | MS.gene072542:CDS | 50.0% | |
| TCGGAGTGCAGGAGGAAAAA+AGG | - | chr7.3:4039216-4039235 | MS.gene072542:CDS | 50.0% | |
| TGAGTGGCAGCTGTTAGACA+TGG | + | chr7.3:4041223-4041242 | None:intergenic | 50.0% | |
| TGCACAGCTTCTGAATCAGC+AGG | + | chr7.3:4038916-4038935 | None:intergenic | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | - | chr7.3:4041234-4041253 | MS.gene072542:CDS | 50.0% | |
| TTGTGTATCCGCATCACTCC+AGG | + | chr7.3:4039061-4039080 | None:intergenic | 50.0% | |
| TTTGCTCAGCCGAAATCCTC+CGG | + | chr7.3:4039883-4039902 | None:intergenic | 50.0% | |
| ! | CGCAGAGGTGTATCTAACTG+TGG | - | chr7.3:4040671-4040690 | MS.gene072542:CDS | 50.0% |
| ! | TGCCTTTTGTTCGAGCCTTG+CGG | + | chr7.3:4041450-4041469 | None:intergenic | 50.0% |
| !! | ACTAGGTTTGGTGTCGAACC+TGG | - | chr7.3:4039774-4039793 | MS.gene072542:CDS | 50.0% |
| !! | CTAGGTTTGGTGTCGAACCT+GGG | - | chr7.3:4039775-4039794 | MS.gene072542:CDS | 50.0% |
| !! | GTTTCTAGTGCTCTGTCTCC+TGG | + | chr7.3:4041317-4041336 | None:intergenic | 50.0% |
| ACCTGGGAAGAACAGTCGTG+GGG | - | chr7.3:4039791-4039810 | MS.gene072542:CDS | 55.0% | |
| AGCTGTTTGGCCCCGCTTAT+TGG | - | chr7.3:4039929-4039948 | MS.gene072542:CDS | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | - | chr7.3:4039205-4039224 | MS.gene072542:CDS | 55.0% | |
| CAGGAGCTACTCAATCTGCC+AGG | + | chr7.3:4039042-4039061 | None:intergenic | 55.0% | |
| CCCGCTTATTGGCAAGAGGT+TGG | - | chr7.3:4039940-4039959 | MS.gene072542:CDS | 55.0% | |
| CTGGCAGATTGAGTAGCTCC+TGG | - | chr7.3:4039040-4039059 | MS.gene072542:CDS | 55.0% | |
| GAACCTGGGAAGAACAGTCG+TGG | - | chr7.3:4039789-4039808 | MS.gene072542:CDS | 55.0% | |
| GAGTAGCTCCTGGAGTGATG+CGG | - | chr7.3:4039050-4039069 | MS.gene072542:CDS | 55.0% | |
| GCCTTGCGGCAAGGATTGAA+AGG | + | chr7.3:4041436-4041455 | None:intergenic | 55.0% | |
| GGAGCTACTCAATCTGCCAG+GGG | + | chr7.3:4039040-4039059 | None:intergenic | 55.0% | |
| TGCCGCAAGGCTCGAACAAA+AGG | - | chr7.3:4041445-4041464 | MS.gene072542:CDS | 55.0% | |
| TTTGTTCGAGCCTTGCGGCA+AGG | + | chr7.3:4041445-4041464 | None:intergenic | 55.0% | |
| AGGTAGCAGATCGGGGCTTG+AGG | + | chr7.3:4040232-4040251 | None:intergenic | 60.0% | |
| GTAGATGGTCGGAGTGCAGG+AGG | - | chr7.3:4039208-4039227 | MS.gene072542:CDS | 60.0% | |
| TGGCCCCGCTTATTGGCAAG+AGG | - | chr7.3:4039936-4039955 | MS.gene072542:CDS | 60.0% | |
| GCCCCACGACTGTTCTTCCC+AGG | + | chr7.3:4039795-4039814 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4038799 | 4041561 | 4038799 | ID=MS.gene072542 |
| chr7.3 | mRNA | 4038799 | 4041561 | 4038799 | ID=MS.gene072542.t1;Parent=MS.gene072542 |
| chr7.3 | exon | 4041013 | 4041561 | 4041013 | ID=MS.gene072542.t1.exon1;Parent=MS.gene072542.t1 |
| chr7.3 | CDS | 4041013 | 4041561 | 4041013 | ID=cds.MS.gene072542.t1;Parent=MS.gene072542.t1 |
| chr7.3 | exon | 4038799 | 4040709 | 4038799 | ID=MS.gene072542.t1.exon2;Parent=MS.gene072542.t1 |
| chr7.3 | CDS | 4038799 | 4040709 | 4038799 | ID=cds.MS.gene072542.t1;Parent=MS.gene072542.t1 |
| Gene Sequence |
| Protein sequence |
