Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29350.t1 | RHN49267.1 | 92.7 | 756 | 53 | 2 | 1 | 756 | 26 | 779 | 0.00E+00 | 1362.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29350.t1 | G7KYL7 | 92.7 | 756 | 53 | 2 | 1 | 756 | 1 | 754 | 0.0e+00 | 1362.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29350 | MS.gene072542 | PPI |
| MS.gene063225 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene050891 | PPI |
| MS.gene29350 | MS.gene78588 | PPI |
| MS.gene65461 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene050890 | PPI |
| MS.gene78587 | MS.gene29350 | PPI |
| MS.gene050893 | MS.gene29350 | PPI |
| MS.gene29351 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene29352 | PPI |
| MS.gene29350 | MS.gene072484 | PPI |
| MS.gene29350 | MS.gene78586 | PPI |
| MS.gene29350 | MS.gene072485 | PPI |
| MS.gene78585 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene050889 | PPI |
| MS.gene29350 | MS.gene78584 | PPI |
| MS.gene072484 | MS.gene29350 | PPI |
| MS.gene67159 | MS.gene29350 | PPI |
| MS.gene050889 | MS.gene29350 | PPI |
| MS.gene053360 | MS.gene29350 | PPI |
| MS.gene054416 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene050892 | PPI |
| MS.gene072481 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene050942 | PPI |
| MS.gene072483 | MS.gene29350 | PPI |
| MS.gene29350 | MS.gene072482 | PPI |
| MS.gene29352 | MS.gene29350 | PPI |
| MS.gene050738 | MS.gene29350 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29350.t1 | MTR_7g113280 | 92.725 | 756 | 53 | 2 | 1 | 756 | 1 | 754 | 0.0 | 1439 |
| MS.gene29350.t1 | MTR_1g041895 | 67.500 | 800 | 207 | 8 | 1 | 754 | 1 | 793 | 0.0 | 1003 |
| MS.gene29350.t1 | MTR_7g113270 | 69.868 | 760 | 204 | 10 | 1 | 754 | 1 | 741 | 0.0 | 971 |
| MS.gene29350.t1 | MTR_7g113220 | 68.511 | 759 | 212 | 11 | 1 | 754 | 1 | 737 | 0.0 | 954 |
| MS.gene29350.t1 | MTR_7g113250 | 73.672 | 433 | 112 | 2 | 14 | 445 | 2 | 433 | 0.0 | 647 |
| MS.gene29350.t1 | MTR_7g113250 | 64.671 | 167 | 55 | 2 | 588 | 754 | 434 | 596 | 7.57e-56 | 202 |
| MS.gene29350.t1 | MTR_7g112390 | 59.780 | 455 | 87 | 6 | 105 | 537 | 1 | 381 | 5.10e-161 | 483 |
| MS.gene29350.t1 | MTR_7g112390 | 59.091 | 220 | 51 | 4 | 537 | 755 | 478 | 659 | 7.70e-59 | 213 |
| MS.gene29350.t1 | MTR_7g108470 | 47.041 | 338 | 173 | 3 | 68 | 401 | 140 | 475 | 5.54e-94 | 313 |
| MS.gene29350.t1 | MTR_4g119630 | 41.620 | 358 | 166 | 5 | 19 | 338 | 37 | 389 | 1.99e-84 | 276 |
| MS.gene29350.t1 | MTR_3g049350 | 74.556 | 169 | 42 | 1 | 278 | 445 | 3 | 171 | 1.49e-75 | 245 |
| MS.gene29350.t1 | MTR_3g049350 | 56.250 | 80 | 32 | 1 | 588 | 667 | 172 | 248 | 6.90e-19 | 87.8 |
| MS.gene29350.t1 | MTR_2g436970 | 37.829 | 304 | 177 | 5 | 26 | 329 | 17 | 308 | 4.47e-60 | 209 |
| MS.gene29350.t1 | MTR_7g113290 | 68.966 | 116 | 33 | 1 | 527 | 642 | 13 | 125 | 4.83e-41 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29350.t1 | AT1G09040 | 48.538 | 342 | 159 | 6 | 70 | 399 | 138 | 474 | 1.84e-94 | 314 |
| MS.gene29350.t1 | AT1G09050 | 45.968 | 372 | 182 | 7 | 73 | 435 | 145 | 506 | 1.03e-91 | 307 |
| MS.gene29350.t1 | AT1G09050 | 45.968 | 372 | 182 | 7 | 73 | 435 | 145 | 506 | 1.03e-91 | 307 |
| MS.gene29350.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 6.90e-87 | 291 |
| MS.gene29350.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 6.90e-87 | 291 |
| MS.gene29350.t1 | AT1G55050 | 37.066 | 518 | 273 | 11 | 73 | 580 | 128 | 602 | 2.57e-79 | 273 |
| MS.gene29350.t1 | AT1G55050 | 37.066 | 518 | 273 | 11 | 73 | 580 | 128 | 602 | 2.57e-79 | 273 |
Find 150 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAAGCCATCTGATTTC+AGG | 0.202807 | 7.2:+3887765 | MS.gene29350:CDS |
| TAACTGAATGACAGACATTT+TGG | 0.202825 | 7.2:-3888405 | None:intergenic |
| CCAAAAGTGTCGATCTCTTC+TGG | 0.207679 | 7.2:+3887363 | MS.gene29350:CDS |
| TAAAGATCATATAAAATTAA+TGG | 0.218425 | 7.2:+3887718 | MS.gene29350:CDS |
| TGCAAAGCTCTGTCTTCTTT+TGG | 0.219428 | 7.2:+3887290 | MS.gene29350:CDS |
| AAAGGGAGAAAATGTATAAT+AGG | 0.228776 | 7.2:+3886747 | MS.gene29350:CDS |
| ACCTTGTGATGTTGATTCTT+TGG | 0.236319 | 7.2:+3888720 | MS.gene29350:CDS |
| GGAATTTCTGCCTGGTATTC+AGG | 0.255405 | 7.2:-3886438 | None:intergenic |
| TGGCTTTCAACCATCTTGTT+TGG | 0.265434 | 7.2:-3888148 | None:intergenic |
| AAGAAAGACCAGATATTCTT+TGG | 0.279773 | 7.2:-3887459 | None:intergenic |
| AGCTGTTTGGCCTCGATTAC+TGG | 0.281580 | 7.2:+3887388 | MS.gene29350:CDS |
| TCGGAGTGCAGGAAATTAAA+AGG | 0.293911 | 7.2:+3886729 | MS.gene29350:CDS |
| CCAGAAGAGATCGACACTTT+TGG | 0.296338 | 7.2:-3887363 | None:intergenic |
| TGTCTCCTTGGATTTATATC+AGG | 0.302477 | 7.2:-3888751 | None:intergenic |
| TTGAATTGGAAGATGCTTCT+AGG | 0.302937 | 7.2:+3888005 | MS.gene29350:CDS |
| ATGCAGCTGTTCCTATTAAA+AGG | 0.307883 | 7.2:+3888266 | MS.gene29350:CDS |
| ACTTTACAAACTGAATTAAC+AGG | 0.318377 | 7.2:-3887803 | None:intergenic |
| TGAGAATTCTTCAGGAGGTT+TGG | 0.326165 | 7.2:+3888333 | MS.gene29350:CDS |
| AATTCAACTGACGGATATTT+CGG | 0.333248 | 7.2:-3887989 | None:intergenic |
| TATCTGGTCTTTCTTATTCC+TGG | 0.333602 | 7.2:+3887467 | MS.gene29350:CDS |
| GAAATATCCGTCAGTTGAAT+TGG | 0.333878 | 7.2:+3887991 | MS.gene29350:CDS |
| TCTTCAAGCTCAAGAATATT+CGG | 0.336030 | 7.2:-3887578 | None:intergenic |
| GAGAATTCTTCAGGAGGTTT+GGG | 0.337535 | 7.2:+3888334 | MS.gene29350:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.339278 | 7.2:+3887375 | MS.gene29350:CDS |
| AATCCTTGACAGGAAGATTT+CGG | 0.340794 | 7.2:+3887330 | MS.gene29350:CDS |
| TATAATAGGGAAGAAACTTT+TGG | 0.348101 | 7.2:+3886761 | MS.gene29350:CDS |
| GCTGCTGGTGTAAAAGATAA+AGG | 0.352913 | 7.2:+3887836 | MS.gene29350:CDS |
| AAATCACTTTCCTCTGCAAT+AGG | 0.356126 | 7.2:+3886531 | MS.gene29350:CDS |
| AGGTTTGGGATCAGATAAAC+TGG | 0.360856 | 7.2:+3888348 | MS.gene29350:CDS |
| GATACCAGTTTGGTGCATAA+AGG | 0.364116 | 7.2:+3887746 | MS.gene29350:CDS |
| TTTCTAGTGCTCTGTCTCCT+TGG | 0.375889 | 7.2:-3888763 | None:intergenic |
| CACATCACTGAGAATTCTTC+AGG | 0.383165 | 7.2:+3888325 | MS.gene29350:CDS |
| CTTCTGTGTTTGATGATAAT+CGG | 0.390702 | 7.2:+3888185 | MS.gene29350:CDS |
| TGTTACCTCCAAAGAATATC+TGG | 0.396531 | 7.2:+3887451 | MS.gene29350:CDS |
| TTTATTGTAGGTAAAAGATC+GGG | 0.411701 | 7.2:-3887699 | None:intergenic |
| AAGGGAGAAAATGTATAATA+GGG | 0.412435 | 7.2:+3886748 | MS.gene29350:CDS |
| AAAGATCATATAAAATTAAT+GGG | 0.413384 | 7.2:+3887719 | MS.gene29350:CDS |
| AATGGGTATTGATACCAGTT+TGG | 0.424546 | 7.2:+3887736 | MS.gene29350:CDS |
| CTTTCCTTTATGCACCAAAC+TGG | 0.426656 | 7.2:-3887750 | None:intergenic |
| TTCAATCAGAGAGTAATATC+TGG | 0.436616 | 7.2:+3888232 | MS.gene29350:CDS |
| CAAAAGTGTCGATCTCTTCT+GGG | 0.438413 | 7.2:+3887364 | MS.gene29350:CDS |
| ACAGATTTCGATGGAACCTT+GGG | 0.459053 | 7.2:-3888586 | None:intergenic |
| CTCGAAAACTTCTCAACGCC+AGG | 0.461495 | 7.2:-3887485 | None:intergenic |
| AGGAAAGCCATCTGATTTCA+GGG | 0.463547 | 7.2:+3887766 | MS.gene29350:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.2:+3886718 | MS.gene29350:CDS |
| AACTGATGATTCACGAAGAA+TGG | 0.471427 | 7.2:+3888069 | MS.gene29350:CDS |
| TACAGATTTCGATGGAACCT+TGG | 0.472631 | 7.2:-3888587 | None:intergenic |
| AGGCCATGCTCACCTTTCTC+TGG | 0.475404 | 7.2:-3888634 | None:intergenic |
| GCAGAATTCGACAAAGTTGA+CGG | 0.478357 | 7.2:+3887913 | MS.gene29350:CDS |
| GTTCCACATCAAGCCTAGTA+AGG | 0.483315 | 7.2:-3887229 | None:intergenic |
| ATGTCTAGCATCAGCCGCTC+AGG | 0.485261 | 7.2:+3888672 | MS.gene29350:CDS |
| GATATAATTCAATCCTTGAC+AGG | 0.488303 | 7.2:+3887320 | MS.gene29350:CDS |
| AAAGTTGAGGCAGGTGCTGC+TGG | 0.488918 | 7.2:+3887821 | MS.gene29350:CDS |
| AAAGATTCATAGAGAACAAA+CGG | 0.491729 | 7.2:+3886643 | MS.gene29350:CDS |
| CTTGTGGAAGCAGTAAGTAT+TGG | 0.492851 | 7.2:+3887191 | MS.gene29350:CDS |
| AGGAGAAGGGAGACCTTACT+AGG | 0.496067 | 7.2:+3887216 | MS.gene29350:CDS |
| TCAGTTTGTAAAGTTGAGGC+AGG | 0.497900 | 7.2:+3887812 | MS.gene29350:CDS |
| CTTTATTGTAGGTAAAAGAT+CGG | 0.498545 | 7.2:-3887700 | None:intergenic |
| GTAACATAGCCTTGATACAT+TGG | 0.499915 | 7.2:-3887434 | None:intergenic |
| ATCATTGACAGTTAGAGCAT+TGG | 0.500083 | 7.2:+3888789 | MS.gene29350:CDS |
| ATGGTGACGGCGCCAGAGAA+AGG | 0.500312 | 7.2:+3888622 | MS.gene29350:CDS |
| AGTAAGTATTGGCAAGGAGA+AGG | 0.505358 | 7.2:+3887202 | MS.gene29350:CDS |
| GCCCCAGGACTGTTCTTCCT+AGG | 0.508970 | 7.2:-3887251 | None:intergenic |
| ATACTCCATGTGACTGGGAT+GGG | 0.509555 | 7.2:-3886558 | None:intergenic |
| TGGAACCTTGGGTCTGTTGA+GGG | 0.510322 | 7.2:-3888575 | None:intergenic |
| GAACCTAGGAAGAACAGTCC+TGG | 0.510751 | 7.2:+3887248 | MS.gene29350:CDS |
| CTGCTGGTGTAAAAGATAAA+GGG | 0.519980 | 7.2:+3887837 | MS.gene29350:CDS |
| CAATGAGGAAGAGCCAGAAA+AGG | 0.522275 | 7.2:+3887625 | MS.gene29350:CDS |
| ATGGAACCTTGGGTCTGTTG+AGG | 0.523435 | 7.2:-3888576 | None:intergenic |
| TCTTATATGAAGTCTACTGT+TGG | 0.528919 | 7.2:+3887158 | MS.gene29350:CDS |
| TCTGATTGCTCAATCAAAGA+AGG | 0.529069 | 7.2:-3886459 | None:intergenic |
| TCGAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.2:+3887503 | MS.gene29350:CDS |
| TTGATATTTACAGATTTCGA+TGG | 0.530008 | 7.2:-3888595 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.530913 | 7.2:+3886706 | MS.gene29350:CDS |
| ATCATAATCATTCTGCTCAA+AGG | 0.531350 | 7.2:-3886361 | None:intergenic |
| TCAGCAATACTCCATGTGAC+TGG | 0.532987 | 7.2:-3886564 | None:intergenic |
| ATGAAGTCTACTGTTGGACT+TGG | 0.533142 | 7.2:+3887164 | MS.gene29350:CDS |
| TCGAATCGGTCCTGAATACC+AGG | 0.536009 | 7.2:+3886428 | MS.gene29350:CDS |
| GACACAAATAGCTTTGTACT+AGG | 0.536661 | 7.2:+3886585 | MS.gene29350:CDS |
| GACATGAATCATTTGCCTCT+AGG | 0.537768 | 7.2:-3888654 | None:intergenic |
| AGCCGCTCAGGAAGTAGTTG+AGG | 0.539080 | 7.2:+3888684 | MS.gene29350:CDS |
| TGTTGGACTTGGCGTTCTTG+TGG | 0.539550 | 7.2:+3887175 | MS.gene29350:CDS |
| GTTTGTGCTGAAAATGCCCC+AGG | 0.539944 | 7.2:-3887266 | None:intergenic |
| AACCTAGGAAGAACAGTCCT+GGG | 0.541835 | 7.2:+3887249 | MS.gene29350:CDS |
| TTCAAATCCCTGAAATCAGA+TGG | 0.542406 | 7.2:-3887773 | None:intergenic |
| TTTAATAGGAACAGCTGCAT+GGG | 0.543232 | 7.2:-3888263 | None:intergenic |
| CTTGAATTCAGTCCTCGAAT+CGG | 0.544267 | 7.2:+3886414 | MS.gene29350:CDS |
| TCATAGAGAACAAACGGATG+GGG | 0.548246 | 7.2:+3886649 | MS.gene29350:CDS |
| AATGAGGAAGAGCCAGAAAA+GGG | 0.549935 | 7.2:+3887626 | MS.gene29350:CDS |
| GTAAGTATTGGCAAGGAGAA+GGG | 0.554132 | 7.2:+3887203 | MS.gene29350:CDS |
| AAAGACCAGATATTCTTTGG+AGG | 0.555308 | 7.2:-3887456 | None:intergenic |
| CGGAGTGCAGGAAATTAAAA+GGG | 0.556354 | 7.2:+3886730 | MS.gene29350:CDS |
| CATTTCTCAACTTGAACGCA+AGG | 0.556373 | 7.2:-3888541 | None:intergenic |
| CAGCCGAAATCTTCCTGTCA+AGG | 0.558912 | 7.2:-3887333 | None:intergenic |
| GGGGCTTGAGGTAACATTGA+CGG | 0.564168 | 7.2:-3887679 | None:intergenic |
| TCTGAGCAACCAATGTATCA+AGG | 0.564748 | 7.2:+3887425 | MS.gene29350:CDS |
| CTCGATTACTGGCAAGAGGT+TGG | 0.566010 | 7.2:+3887399 | MS.gene29350:CDS |
| AGACCAGCTTTCACTTCGAA+CGG | 0.567796 | 7.2:+3886479 | MS.gene29350:CDS |
| GATCCGTTCGAAGTGAAAGC+TGG | 0.567844 | 7.2:-3886482 | None:intergenic |
| TTCATAGAGAACAAACGGAT+GGG | 0.571891 | 7.2:+3886648 | MS.gene29350:CDS |
| TGGTATTCAGGACCGATTCG+AGG | 0.572296 | 7.2:-3886426 | None:intergenic |
| AATCTTCTGAAAGAAAGTAA+AGG | 0.572900 | 7.2:+3888037 | MS.gene29350:CDS |
| AAGGAATGTAAAACATAGCA+AGG | 0.573770 | 7.2:+3887871 | MS.gene29350:CDS |
| TGGCCTCGATTACTGGCAAG+AGG | 0.576092 | 7.2:+3887395 | MS.gene29350:CDS |
| TCAAAGAAGGAATTTCTGCC+TGG | 0.578058 | 7.2:-3886446 | None:intergenic |
| GAATATTCTTGAGCTTGAAG+AGG | 0.578780 | 7.2:+3887580 | MS.gene29350:CDS |
| AGGTAAAAGATCGGGGCTTG+AGG | 0.579822 | 7.2:-3887691 | None:intergenic |
| AATACTCCATGTGACTGGGA+TGG | 0.580858 | 7.2:-3886559 | None:intergenic |
| GAGATTAACTGCTTGTGTCA+AGG | 0.581897 | 7.2:+3888291 | MS.gene29350:CDS |
| ATCTGTAAATATCAAAACAA+TGG | 0.583516 | 7.2:+3888603 | MS.gene29350:CDS |
| CTAGGCTTGATGTGGAACCT+AGG | 0.584890 | 7.2:+3887234 | MS.gene29350:CDS |
| TGATAGTGATCCAAACAAGA+TGG | 0.588516 | 7.2:+3888138 | MS.gene29350:CDS |
| TAATTCAGTTTGTAAAGTTG+AGG | 0.590421 | 7.2:+3887808 | MS.gene29350:CDS |
| GAAAGGTGAGCATGGCCTAG+AGG | 0.593104 | 7.2:+3888639 | MS.gene29350:CDS |
| TGAACATCTTCTGAATCAGT+AGG | 0.595610 | 7.2:-3886504 | None:intergenic |
| GATACCAATGGACTTTCCGA+AGG | 0.596842 | 7.2:+3887941 | MS.gene29350:CDS |
| CTGAAGAATTCTCAGTGATG+TGG | 0.597073 | 7.2:-3888324 | None:intergenic |
| ATTCATAGAGAACAAACGGA+TGG | 0.602448 | 7.2:+3886647 | MS.gene29350:CDS |
| ACATCACAAGGTGTTCTCAA+AGG | 0.603032 | 7.2:-3888709 | None:intergenic |
| TTGACGGTCATTGATACCAA+TGG | 0.605853 | 7.2:+3887929 | MS.gene29350:CDS |
| GCGCCAGAGAAAGGTGAGCA+TGG | 0.606459 | 7.2:+3888631 | MS.gene29350:CDS |
| TGATGATTCACGAAGAATGG+TGG | 0.607579 | 7.2:+3888072 | MS.gene29350:CDS |
| GCATCTTCCAATTCAACTGA+CGG | 0.608811 | 7.2:-3887998 | None:intergenic |
| AAATATCAAAACAATGGTGA+CGG | 0.614111 | 7.2:+3888609 | MS.gene29350:CDS |
| CAGCAATACTCCATGTGACT+GGG | 0.616407 | 7.2:-3886563 | None:intergenic |
| ATAAAGGGCAAAGTTATACA+AGG | 0.618599 | 7.2:+3887852 | MS.gene29350:CDS |
| GTTTGCCCATCCCAGTCACA+TGG | 0.618676 | 7.2:+3886553 | MS.gene29350:CDS |
| TTATTGTAGGTAAAAGATCG+GGG | 0.620178 | 7.2:-3887698 | None:intergenic |
| CAACCTCTTGCCAGTAATCG+AGG | 0.623252 | 7.2:-3887398 | None:intergenic |
| TTGATGATAATCGGATGAAG+AGG | 0.623283 | 7.2:+3888194 | MS.gene29350:CDS |
| ATCACTGAGAATTCTTCAGG+AGG | 0.625006 | 7.2:+3888328 | MS.gene29350:CDS |
| AACAGCCTGATATAAATCCA+AGG | 0.626073 | 7.2:+3888746 | MS.gene29350:CDS |
| GTTTCTAAATCATATGTCGA+TGG | 0.626151 | 7.2:+3887110 | MS.gene29350:CDS |
| AGACCTTACTAGGCTTGATG+TGG | 0.628161 | 7.2:+3887226 | MS.gene29350:CDS |
| TGAGATTTGTCAGAGACATG+AGG | 0.628677 | 7.2:-3886822 | None:intergenic |
| TCCAAAGAATCAACATCACA+AGG | 0.630329 | 7.2:-3888721 | None:intergenic |
| CATAGAGAACAAACGGATGG+GGG | 0.631391 | 7.2:+3886650 | MS.gene29350:CDS |
| AAGGATTGAATTATATCACT+AGG | 0.634298 | 7.2:-3887314 | None:intergenic |
| GGAAGCAGTAAGTATTGGCA+AGG | 0.637899 | 7.2:+3887196 | MS.gene29350:CDS |
| TAAAGTTCATAGCTGCAATG+AGG | 0.642923 | 7.2:+3887610 | MS.gene29350:CDS |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.2:+3886710 | MS.gene29350:CDS |
| GAAGCTAAGATGCTGATATG+TGG | 0.648506 | 7.2:+3888094 | MS.gene29350:CDS |
| CAGCTGTTCCTATTAAAAGG+AGG | 0.650589 | 7.2:+3888269 | MS.gene29350:CDS |
| TTCTTTAGCAGACAGAAGTG+TGG | 0.672598 | 7.2:+3888465 | MS.gene29350:CDS |
| TTACACCCTCAACAGACCCA+AGG | 0.679268 | 7.2:+3888570 | MS.gene29350:CDS |
| GATGGGCAAACCTATTGCAG+AGG | 0.681836 | 7.2:-3886541 | None:intergenic |
| TAGTGATGTCTTGAACAAAG+TGG | 0.700987 | 7.2:+3887547 | MS.gene29350:CDS |
| GGTTTGGGATCAGATAAACT+GGG | 0.714357 | 7.2:+3888349 | MS.gene29350:CDS |
| ACCTAGGAAGAACAGTCCTG+GGG | 0.724587 | 7.2:+3887250 | MS.gene29350:CDS |
| CTCCTCAACTACTTCCTGAG+CGG | 0.726279 | 7.2:-3888686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATCATATAAAATTAAT+GGG | + | chr7.2:3887719-3887738 | MS.gene29350:CDS | 10.0% |
| !! | TAAAGATCATATAAAATTAA+TGG | + | chr7.2:3887718-3887737 | MS.gene29350:CDS | 10.0% |
| !!! | TTATTTAAAAAAAAAGGTAC+TGG | - | chr7.2:3887025-3887044 | None:intergenic | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | - | chr7.2:3887714-3887733 | None:intergenic | 15.0% |
| !! | ATCTGTAAATATCAAAACAA+TGG | + | chr7.2:3888603-3888622 | MS.gene29350:CDS | 20.0% |
| !!! | GAAATACTTACATTTTACTA+TGG | + | chr7.2:3886672-3886691 | MS.gene29350:CDS | 20.0% |
| !!! | TACTAGGTTTGTTTATTTTT+GGG | + | chr7.2:3886601-3886620 | MS.gene29350:CDS | 20.0% |
| ! | AAAGATTCATAGAGAACAAA+CGG | + | chr7.2:3886643-3886662 | MS.gene29350:CDS | 25.0% |
| ! | AAAGGGAGAAAATGTATAAT+AGG | + | chr7.2:3886747-3886766 | MS.gene29350:CDS | 25.0% |
| ! | AAATATCAAAACAATGGTGA+CGG | + | chr7.2:3888609-3888628 | MS.gene29350:CDS | 25.0% |
| ! | AAGGATTGAATTATATCACT+AGG | - | chr7.2:3887317-3887336 | None:intergenic | 25.0% |
| ! | AAGGGAGAAAATGTATAATA+GGG | + | chr7.2:3886748-3886767 | MS.gene29350:CDS | 25.0% |
| ! | ACTTTACAAACTGAATTAAC+AGG | - | chr7.2:3887806-3887825 | None:intergenic | 25.0% |
| ! | CTTTATTGTAGGTAAAAGAT+CGG | - | chr7.2:3887703-3887722 | None:intergenic | 25.0% |
| ! | CTTTGCTTATATTTATACTC+AGG | + | chr7.2:3887088-3887107 | MS.gene29350:intron | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | - | chr7.2:3887086-3887105 | None:intergenic | 25.0% |
| ! | TAATTCAGTTTGTAAAGTTG+AGG | + | chr7.2:3887808-3887827 | MS.gene29350:CDS | 25.0% |
| ! | TTGATATTTACAGATTTCGA+TGG | - | chr7.2:3888598-3888617 | None:intergenic | 25.0% |
| ! | TTTATTGTAGGTAAAAGATC+GGG | - | chr7.2:3887702-3887721 | None:intergenic | 25.0% |
| !! | AATCTTCTGAAAGAAAGTAA+AGG | + | chr7.2:3888037-3888056 | MS.gene29350:CDS | 25.0% |
| !! | ATCTCAAGATACATTTTTAC+AGG | + | chr7.2:3886839-3886858 | MS.gene29350:CDS | 25.0% |
| !! | TATAATAGGGAAGAAACTTT+TGG | + | chr7.2:3886761-3886780 | MS.gene29350:CDS | 25.0% |
| !! | TTTCTTCAATAGTTTTCCTT+CGG | - | chr7.2:3887960-3887979 | None:intergenic | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+TGG | + | chr7.2:3886600-3886619 | MS.gene29350:CDS | 25.0% |
| !!! | TAAAAAAAAAGGTACTGGTA+TGG | - | chr7.2:3887020-3887039 | None:intergenic | 25.0% |
| !!! | TAATGAAAAAAGCATTCTCA+AGG | + | chr7.2:3888495-3888514 | MS.gene29350:CDS | 25.0% |
| AAGAAAGACCAGATATTCTT+TGG | - | chr7.2:3887462-3887481 | None:intergenic | 30.0% | |
| AAGGAATGTAAAACATAGCA+AGG | + | chr7.2:3887871-3887890 | MS.gene29350:CDS | 30.0% | |
| ATAAAGGGCAAAGTTATACA+AGG | + | chr7.2:3887852-3887871 | MS.gene29350:CDS | 30.0% | |
| ATCATAATCATTCTGCTCAA+AGG | - | chr7.2:3886364-3886383 | None:intergenic | 30.0% | |
| ATGTGCAAAGTAGACAAAAA+AGG | + | chr7.2:3888836-3888855 | MS.gene29350:CDS | 30.0% | |
| GATATAATTCAATCCTTGAC+AGG | + | chr7.2:3887320-3887339 | MS.gene29350:CDS | 30.0% | |
| GTTACAATGGTAATTGCAAT+GGG | + | chr7.2:3886978-3886997 | MS.gene29350:intron | 30.0% | |
| GTTTCTAAATCATATGTCGA+TGG | + | chr7.2:3887110-3887129 | MS.gene29350:CDS | 30.0% | |
| TCTTATATGAAGTCTACTGT+TGG | + | chr7.2:3887158-3887177 | MS.gene29350:CDS | 30.0% | |
| TCTTCAAGCTCAAGAATATT+CGG | - | chr7.2:3887581-3887600 | None:intergenic | 30.0% | |
| TGTTACAATGGTAATTGCAA+TGG | + | chr7.2:3886977-3886996 | MS.gene29350:intron | 30.0% | |
| TTATTGTAGGTAAAAGATCG+GGG | - | chr7.2:3887701-3887720 | None:intergenic | 30.0% | |
| TTCAATCAGAGAGTAATATC+TGG | + | chr7.2:3888232-3888251 | MS.gene29350:CDS | 30.0% | |
| ! | AATTCAACTGACGGATATTT+CGG | - | chr7.2:3887992-3888011 | None:intergenic | 30.0% |
| ! | CTTCTGTGTTTGATGATAAT+CGG | + | chr7.2:3888185-3888204 | MS.gene29350:CDS | 30.0% |
| ! | GTTAATCTCCTCCTTTTAAT+AGG | - | chr7.2:3888280-3888299 | None:intergenic | 30.0% |
| ! | TAACTGAATGACAGACATTT+TGG | - | chr7.2:3888408-3888427 | None:intergenic | 30.0% |
| !!! | CAGAAGTATGTTGATTTTTC+TGG | - | chr7.2:3888171-3888190 | None:intergenic | 30.0% |
| AAAGACCAGATATTCTTTGG+AGG | - | chr7.2:3887459-3887478 | None:intergenic | 35.0% | |
| AAAGTGAGGAATGAAGCAAA+TGG | - | chr7.2:3887072-3887091 | None:intergenic | 35.0% | |
| AAATCACTTTCCTCTGCAAT+AGG | + | chr7.2:3886531-3886550 | MS.gene29350:CDS | 35.0% | |
| AACAGCCTGATATAAATCCA+AGG | + | chr7.2:3888746-3888765 | MS.gene29350:CDS | 35.0% | |
| AACTGATGATTCACGAAGAA+TGG | + | chr7.2:3888069-3888088 | MS.gene29350:CDS | 35.0% | |
| AATCCTTGACAGGAAGATTT+CGG | + | chr7.2:3887330-3887349 | MS.gene29350:CDS | 35.0% | |
| ATCATTGACAGTTAGAGCAT+TGG | + | chr7.2:3888789-3888808 | MS.gene29350:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+AGG | + | chr7.2:3888266-3888285 | MS.gene29350:CDS | 35.0% | |
| ATTCATAGAGAACAAACGGA+TGG | + | chr7.2:3886647-3886666 | MS.gene29350:CDS | 35.0% | |
| CTGCTGGTGTAAAAGATAAA+GGG | + | chr7.2:3887837-3887856 | MS.gene29350:CDS | 35.0% | |
| GAAATATCCGTCAGTTGAAT+TGG | + | chr7.2:3887991-3888010 | MS.gene29350:CDS | 35.0% | |
| GAATATTCTTGAGCTTGAAG+AGG | + | chr7.2:3887580-3887599 | MS.gene29350:CDS | 35.0% | |
| GCTATGTGCATATGTTACAA+TGG | + | chr7.2:3886965-3886984 | MS.gene29350:intron | 35.0% | |
| TAAAGTTCATAGCTGCAATG+AGG | + | chr7.2:3887610-3887629 | MS.gene29350:CDS | 35.0% | |
| TAGTGATGTCTTGAACAAAG+TGG | + | chr7.2:3887547-3887566 | MS.gene29350:CDS | 35.0% | |
| TCCAAAGAATCAACATCACA+AGG | - | chr7.2:3888724-3888743 | None:intergenic | 35.0% | |
| TCTGATTGCTCAATCAAAGA+AGG | - | chr7.2:3886462-3886481 | None:intergenic | 35.0% | |
| TGAACATCTTCTGAATCAGT+AGG | - | chr7.2:3886507-3886526 | None:intergenic | 35.0% | |
| TGCAAAACCTTCACAAGTTA+TGG | + | chr7.2:3886916-3886935 | MS.gene29350:intron | 35.0% | |
| TGCATTGTAACATCAAACGA+AGG | - | chr7.2:3886900-3886919 | None:intergenic | 35.0% | |
| TGTCTCCTTGGATTTATATC+AGG | - | chr7.2:3888754-3888773 | None:intergenic | 35.0% | |
| TGTTACCTCCAAAGAATATC+TGG | + | chr7.2:3887451-3887470 | MS.gene29350:CDS | 35.0% | |
| TTCAAATCCCTGAAATCAGA+TGG | - | chr7.2:3887776-3887795 | None:intergenic | 35.0% | |
| TTCATAGAGAACAAACGGAT+GGG | + | chr7.2:3886648-3886667 | MS.gene29350:CDS | 35.0% | |
| TTGAATTGGAAGATGCTTCT+AGG | + | chr7.2:3888005-3888024 | MS.gene29350:CDS | 35.0% | |
| TTTAATAGGAACAGCTGCAT+GGG | - | chr7.2:3888266-3888285 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | + | chr7.2:3886706-3886725 | MS.gene29350:CDS | 35.0% |
| ! | GGAAAGTTTTACGAAACTGA+TGG | + | chr7.2:3886693-3886712 | MS.gene29350:CDS | 35.0% |
| ! | GTAACATAGCCTTGATACAT+TGG | - | chr7.2:3887437-3887456 | None:intergenic | 35.0% |
| ! | TATCTGGTCTTTCTTATTCC+TGG | + | chr7.2:3887467-3887486 | MS.gene29350:CDS | 35.0% |
| ! | TCTTCATTTGATCCCTTTTC+TGG | - | chr7.2:3887641-3887660 | None:intergenic | 35.0% |
| ! | TGATAGTGATCCAAACAAGA+TGG | + | chr7.2:3888138-3888157 | MS.gene29350:CDS | 35.0% |
| ! | TTGATGATAATCGGATGAAG+AGG | + | chr7.2:3888194-3888213 | MS.gene29350:CDS | 35.0% |
| ! | TTTTAATAGGAACAGCTGCA+TGG | - | chr7.2:3888267-3888286 | None:intergenic | 35.0% |
| !! | AATGGGTATTGATACCAGTT+TGG | + | chr7.2:3887736-3887755 | MS.gene29350:CDS | 35.0% |
| !! | ACCTTGTGATGTTGATTCTT+TGG | + | chr7.2:3888720-3888739 | MS.gene29350:CDS | 35.0% |
| !! | GACACAAATAGCTTTGTACT+AGG | + | chr7.2:3886585-3886604 | MS.gene29350:CDS | 35.0% |
| !! | TGAATGACAGACATTTTGGT+TGG | - | chr7.2:3888404-3888423 | None:intergenic | 35.0% |
| AAGGAAAGCCATCTGATTTC+AGG | + | chr7.2:3887765-3887784 | MS.gene29350:CDS | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+GGG | + | chr7.2:3887626-3887645 | MS.gene29350:CDS | 40.0% | |
| ACAGATTTCGATGGAACCTT+GGG | - | chr7.2:3888589-3888608 | None:intergenic | 40.0% | |
| AGGAAAGCCATCTGATTTCA+GGG | + | chr7.2:3887766-3887785 | MS.gene29350:CDS | 40.0% | |
| ATCACTGAGAATTCTTCAGG+AGG | + | chr7.2:3888328-3888347 | MS.gene29350:CDS | 40.0% | |
| ATGAAGTCTACTGTTGGACT+TGG | + | chr7.2:3887164-3887183 | MS.gene29350:CDS | 40.0% | |
| CACATCACTGAGAATTCTTC+AGG | + | chr7.2:3888325-3888344 | MS.gene29350:CDS | 40.0% | |
| CAGCTGTTCCTATTAAAAGG+AGG | + | chr7.2:3888269-3888288 | MS.gene29350:CDS | 40.0% | |
| CATTTCTCAACTTGAACGCA+AGG | - | chr7.2:3888544-3888563 | None:intergenic | 40.0% | |
| CGGAGTGCAGGAAATTAAAA+GGG | + | chr7.2:3886730-3886749 | MS.gene29350:CDS | 40.0% | |
| CTGAAGAATTCTCAGTGATG+TGG | - | chr7.2:3888327-3888346 | None:intergenic | 40.0% | |
| CTTGAATTCAGTCCTCGAAT+CGG | + | chr7.2:3886414-3886433 | MS.gene29350:CDS | 40.0% | |
| CTTGTGGAAGCAGTAAGTAT+TGG | + | chr7.2:3887191-3887210 | MS.gene29350:CDS | 40.0% | |
| CTTTCCTTTATGCACCAAAC+TGG | - | chr7.2:3887753-3887772 | None:intergenic | 40.0% | |
| GAAGCTAAGATGCTGATATG+TGG | + | chr7.2:3888094-3888113 | MS.gene29350:CDS | 40.0% | |
| GACATGAATCATTTGCCTCT+AGG | - | chr7.2:3888657-3888676 | None:intergenic | 40.0% | |
| GAGAATTCTTCAGGAGGTTT+GGG | + | chr7.2:3888334-3888353 | MS.gene29350:CDS | 40.0% | |
| GAGATTAACTGCTTGTGTCA+AGG | + | chr7.2:3888291-3888310 | MS.gene29350:CDS | 40.0% | |
| GCAGAATTCGACAAAGTTGA+CGG | + | chr7.2:3887913-3887932 | MS.gene29350:CDS | 40.0% | |
| GCATCTTCCAATTCAACTGA+CGG | - | chr7.2:3888001-3888020 | None:intergenic | 40.0% | |
| GCTGCTGGTGTAAAAGATAA+AGG | + | chr7.2:3887836-3887855 | MS.gene29350:CDS | 40.0% | |
| TACAGATTTCGATGGAACCT+TGG | - | chr7.2:3888590-3888609 | None:intergenic | 40.0% | |
| TCAAAGAAGGAATTTCTGCC+TGG | - | chr7.2:3886449-3886468 | None:intergenic | 40.0% | |
| TCAGTTTGTAAAGTTGAGGC+AGG | + | chr7.2:3887812-3887831 | MS.gene29350:CDS | 40.0% | |
| TCATAGAGAACAAACGGATG+GGG | + | chr7.2:3886649-3886668 | MS.gene29350:CDS | 40.0% | |
| TCGAGGAGAAAACTTGTGAA+AGG | + | chr7.2:3887503-3887522 | MS.gene29350:CDS | 40.0% | |
| TCGGAGTGCAGGAAATTAAA+AGG | + | chr7.2:3886729-3886748 | MS.gene29350:CDS | 40.0% | |
| TCTGAGCAACCAATGTATCA+AGG | + | chr7.2:3887425-3887444 | MS.gene29350:CDS | 40.0% | |
| TGAGAATTCTTCAGGAGGTT+TGG | + | chr7.2:3888333-3888352 | MS.gene29350:CDS | 40.0% | |
| TGAGATTTGTCAGAGACATG+AGG | - | chr7.2:3886825-3886844 | None:intergenic | 40.0% | |
| TGATGATTCACGAAGAATGG+TGG | + | chr7.2:3888072-3888091 | MS.gene29350:CDS | 40.0% | |
| TGGCTTTCAACCATCTTGTT+TGG | - | chr7.2:3888151-3888170 | None:intergenic | 40.0% | |
| TTCTTTAGCAGACAGAAGTG+TGG | + | chr7.2:3888465-3888484 | MS.gene29350:CDS | 40.0% | |
| TTGACGGTCATTGATACCAA+TGG | + | chr7.2:3887929-3887948 | MS.gene29350:CDS | 40.0% | |
| ! | ACATCACAAGGTGTTCTCAA+AGG | - | chr7.2:3888712-3888731 | None:intergenic | 40.0% |
| ! | AGATGCTCCATAACTTGTGA+AGG | - | chr7.2:3886926-3886945 | None:intergenic | 40.0% |
| ! | AGGTTTGGGATCAGATAAAC+TGG | + | chr7.2:3888348-3888367 | MS.gene29350:CDS | 40.0% |
| ! | ATAGGGAAGAAACTTTTGGC+TGG | + | chr7.2:3886765-3886784 | MS.gene29350:CDS | 40.0% |
| ! | GGTTTGGGATCAGATAAACT+GGG | + | chr7.2:3888349-3888368 | MS.gene29350:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | + | chr7.2:3886710-3886729 | MS.gene29350:CDS | 40.0% |
| ! | TGCAAAGCTCTGTCTTCTTT+TGG | + | chr7.2:3887290-3887309 | MS.gene29350:CDS | 40.0% |
| ! | TTTTCCTTCGGAAAGTCCAT+TGG | - | chr7.2:3887948-3887967 | None:intergenic | 40.0% |
| !! | AGTAAGTATTGGCAAGGAGA+AGG | + | chr7.2:3887202-3887221 | MS.gene29350:CDS | 40.0% |
| !! | CAAAAGTGTCGATCTCTTCT+GGG | + | chr7.2:3887364-3887383 | MS.gene29350:CDS | 40.0% |
| !! | GATACCAGTTTGGTGCATAA+AGG | + | chr7.2:3887746-3887765 | MS.gene29350:CDS | 40.0% |
| !! | GTAAGTATTGGCAAGGAGAA+GGG | + | chr7.2:3887203-3887222 | MS.gene29350:CDS | 40.0% |
| AACCTAGGAAGAACAGTCCT+GGG | + | chr7.2:3887249-3887268 | MS.gene29350:CDS | 45.0% | |
| AATACTCCATGTGACTGGGA+TGG | - | chr7.2:3886562-3886581 | None:intergenic | 45.0% | |
| AGACCAGCTTTCACTTCGAA+CGG | + | chr7.2:3886479-3886498 | MS.gene29350:CDS | 45.0% | |
| AGACCTTACTAGGCTTGATG+TGG | + | chr7.2:3887226-3887245 | MS.gene29350:CDS | 45.0% | |
| ATACTCCATGTGACTGGGAT+GGG | - | chr7.2:3886561-3886580 | None:intergenic | 45.0% | |
| CAATGAGGAAGAGCCAGAAA+AGG | + | chr7.2:3887625-3887644 | MS.gene29350:CDS | 45.0% | |
| CAGCAATACTCCATGTGACT+GGG | - | chr7.2:3886566-3886585 | None:intergenic | 45.0% | |
| CATAGAGAACAAACGGATGG+GGG | + | chr7.2:3886650-3886669 | MS.gene29350:CDS | 45.0% | |
| GGAATTTCTGCCTGGTATTC+AGG | - | chr7.2:3886441-3886460 | None:intergenic | 45.0% | |
| GTTCCACATCAAGCCTAGTA+AGG | - | chr7.2:3887232-3887251 | None:intergenic | 45.0% | |
| TCAGCAATACTCCATGTGAC+TGG | - | chr7.2:3886567-3886586 | None:intergenic | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | + | chr7.2:3887375-3887394 | MS.gene29350:CDS | 45.0% |
| ! | CCAGAAGAGATCGACACTTT+TGG | - | chr7.2:3887366-3887385 | None:intergenic | 45.0% |
| ! | GATACCAATGGACTTTCCGA+AGG | + | chr7.2:3887941-3887960 | MS.gene29350:CDS | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+TGG | - | chr7.2:3888766-3888785 | None:intergenic | 45.0% |
| !! | CCAAAAGTGTCGATCTCTTC+TGG | + | chr7.2:3887363-3887382 | MS.gene29350:CDS | 45.0% |
| !! | GGAAGCAGTAAGTATTGGCA+AGG | + | chr7.2:3887196-3887215 | MS.gene29350:CDS | 45.0% |
| !! | AAAAAGTTATTTAAAAAAAA+AGG | - | chr7.2:3887031-3887050 | None:intergenic | 5.0% |
| ACCTAGGAAGAACAGTCCTG+GGG | + | chr7.2:3887250-3887269 | MS.gene29350:CDS | 50.0% | |
| AGCTGTTTGGCCTCGATTAC+TGG | + | chr7.2:3887388-3887407 | MS.gene29350:CDS | 50.0% | |
| AGGAGAAGGGAGACCTTACT+AGG | + | chr7.2:3887216-3887235 | MS.gene29350:CDS | 50.0% | |
| AGGTAAAAGATCGGGGCTTG+AGG | - | chr7.2:3887694-3887713 | None:intergenic | 50.0% | |
| ATGGAACCTTGGGTCTGTTG+AGG | - | chr7.2:3888579-3888598 | None:intergenic | 50.0% | |
| CAACCTCTTGCCAGTAATCG+AGG | - | chr7.2:3887401-3887420 | None:intergenic | 50.0% | |
| CAATGGGAACCTGTGCTCTA+TGG | + | chr7.2:3886994-3887013 | MS.gene29350:intron | 50.0% | |
| CAGCCGAAATCTTCCTGTCA+AGG | - | chr7.2:3887336-3887355 | None:intergenic | 50.0% | |
| CTAGGCTTGATGTGGAACCT+AGG | + | chr7.2:3887234-3887253 | MS.gene29350:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+CGG | - | chr7.2:3888689-3888708 | None:intergenic | 50.0% | |
| CTCGAAAACTTCTCAACGCC+AGG | - | chr7.2:3887488-3887507 | None:intergenic | 50.0% | |
| CTCGATTACTGGCAAGAGGT+TGG | + | chr7.2:3887399-3887418 | MS.gene29350:CDS | 50.0% | |
| GAACCTAGGAAGAACAGTCC+TGG | + | chr7.2:3887248-3887267 | MS.gene29350:CDS | 50.0% | |
| GATCCGTTCGAAGTGAAAGC+TGG | - | chr7.2:3886485-3886504 | None:intergenic | 50.0% | |
| GATGGGCAAACCTATTGCAG+AGG | - | chr7.2:3886544-3886563 | None:intergenic | 50.0% | |
| GGGGCTTGAGGTAACATTGA+CGG | - | chr7.2:3887682-3887701 | None:intergenic | 50.0% | |
| GTTTGTGCTGAAAATGCCCC+AGG | - | chr7.2:3887269-3887288 | None:intergenic | 50.0% | |
| TATCAGCAGCAGCAGCAGAA+AGG | + | chr7.2:3888430-3888449 | MS.gene29350:CDS | 50.0% | |
| TCGAATCGGTCCTGAATACC+AGG | + | chr7.2:3886428-3886447 | MS.gene29350:CDS | 50.0% | |
| TGGAACCTTGGGTCTGTTGA+GGG | - | chr7.2:3888578-3888597 | None:intergenic | 50.0% | |
| TGTTGGACTTGGCGTTCTTG+TGG | + | chr7.2:3887175-3887194 | MS.gene29350:CDS | 50.0% | |
| TTACACCCTCAACAGACCCA+AGG | + | chr7.2:3888570-3888589 | MS.gene29350:CDS | 50.0% | |
| !! | AGAAACTTTTGGCTGGAGCG+AGG | + | chr7.2:3886772-3886791 | MS.gene29350:CDS | 50.0% |
| !! | CTGGCGTTGAGAAGTTTTCG+AGG | + | chr7.2:3887486-3887505 | MS.gene29350:CDS | 50.0% |
| !! | TGGTATTCAGGACCGATTCG+AGG | - | chr7.2:3886429-3886448 | None:intergenic | 50.0% |
| AGCCGCTCAGGAAGTAGTTG+AGG | + | chr7.2:3888684-3888703 | MS.gene29350:CDS | 55.0% | |
| AGGCCATGCTCACCTTTCTC+TGG | - | chr7.2:3888637-3888656 | None:intergenic | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | + | chr7.2:3886718-3886737 | MS.gene29350:CDS | 55.0% | |
| ATGTCTAGCATCAGCCGCTC+AGG | + | chr7.2:3888672-3888691 | MS.gene29350:CDS | 55.0% | |
| CTGGTATGGCCATAGAGCAC+AGG | - | chr7.2:3887006-3887025 | None:intergenic | 55.0% | |
| GAAAGGTGAGCATGGCCTAG+AGG | + | chr7.2:3888639-3888658 | MS.gene29350:CDS | 55.0% | |
| GTTTGCCCATCCCAGTCACA+TGG | + | chr7.2:3886553-3886572 | MS.gene29350:CDS | 55.0% | |
| TGGCCTCGATTACTGGCAAG+AGG | + | chr7.2:3887395-3887414 | MS.gene29350:CDS | 55.0% | |
| ! | AAAGTTGAGGCAGGTGCTGC+TGG | + | chr7.2:3887821-3887840 | MS.gene29350:CDS | 55.0% |
| GCCCCAGGACTGTTCTTCCT+AGG | - | chr7.2:3887254-3887273 | None:intergenic | 60.0% | |
| GCGCCAGAGAAAGGTGAGCA+TGG | + | chr7.2:3888631-3888650 | MS.gene29350:CDS | 60.0% | |
| !! | ATGGTGACGGCGCCAGAGAA+AGG | + | chr7.2:3888622-3888641 | MS.gene29350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 3886354 | 3888873 | 3886354 | ID=MS.gene29350 |
| chr7.2 | mRNA | 3886354 | 3888873 | 3886354 | ID=MS.gene29350.t1;Parent=MS.gene29350 |
| chr7.2 | exon | 3886354 | 3886860 | 3886354 | ID=MS.gene29350.t1.exon1;Parent=MS.gene29350.t1 |
| chr7.2 | CDS | 3886354 | 3886860 | 3886354 | ID=cds.MS.gene29350.t1;Parent=MS.gene29350.t1 |
| chr7.2 | exon | 3887110 | 3888873 | 3887110 | ID=MS.gene29350.t1.exon2;Parent=MS.gene29350.t1 |
| chr7.2 | CDS | 3887110 | 3888873 | 3887110 | ID=cds.MS.gene29350.t1;Parent=MS.gene29350.t1 |
| Gene Sequence |
| Protein sequence |
