Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072483.t1 | XP_024627185.1 | 90 | 762 | 55 | 3 | 1 | 750 | 1 | 753 | 0.00E+00 | 1331.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072483.t1 | G7KYL3 | 90.0 | 762 | 55 | 3 | 1 | 750 | 1 | 753 | 0.0e+00 | 1331.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072483 | MS.gene29352 | PPI |
| MS.gene063225 | MS.gene072483 | PPI |
| MS.gene072483 | MS.gene78588 | PPI |
| MS.gene072483 | MS.gene050890 | PPI |
| MS.gene072483 | MS.gene050889 | PPI |
| MS.gene050738 | MS.gene072483 | PPI |
| MS.gene65461 | MS.gene072483 | PPI |
| MS.gene072483 | MS.gene78584 | PPI |
| MS.gene072483 | MS.gene072484 | PPI |
| MS.gene072483 | MS.gene78586 | PPI |
| MS.gene072483 | MS.gene072485 | PPI |
| MS.gene050893 | MS.gene072483 | PPI |
| MS.gene072483 | MS.gene050892 | PPI |
| MS.gene072483 | MS.gene050942 | PPI |
| MS.gene78585 | MS.gene072483 | PPI |
| MS.gene78587 | MS.gene072483 | PPI |
| MS.gene072483 | MS.gene072482 | PPI |
| MS.gene29351 | MS.gene072483 | PPI |
| MS.gene67159 | MS.gene072483 | PPI |
| MS.gene053360 | MS.gene072483 | PPI |
| MS.gene054416 | MS.gene072483 | PPI |
| MS.gene072483 | MS.gene29350 | PPI |
| MS.gene072481 | MS.gene072483 | PPI |
| MS.gene072483 | MS.gene050891 | PPI |
| MS.gene072483 | MS.gene072542 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072483.t1 | MTR_7g113270 | 92.257 | 762 | 42 | 3 | 1 | 750 | 1 | 757 | 0.0 | 1380 |
| MS.gene072483.t1 | MTR_7g113220 | 90.026 | 762 | 55 | 3 | 1 | 750 | 1 | 753 | 0.0 | 1344 |
| MS.gene072483.t1 | MTR_1g041895 | 68.881 | 813 | 186 | 11 | 1 | 750 | 1 | 809 | 0.0 | 1035 |
| MS.gene072483.t1 | MTR_7g113280 | 69.353 | 757 | 204 | 9 | 1 | 734 | 1 | 752 | 0.0 | 997 |
| MS.gene072483.t1 | MTR_7g113250 | 76.212 | 433 | 91 | 2 | 13 | 433 | 1 | 433 | 0.0 | 666 |
| MS.gene072483.t1 | MTR_7g113250 | 69.540 | 174 | 52 | 1 | 575 | 747 | 436 | 609 | 3.33e-70 | 242 |
| MS.gene072483.t1 | MTR_7g112390 | 60.390 | 462 | 97 | 7 | 105 | 554 | 1 | 388 | 1.54e-157 | 474 |
| MS.gene072483.t1 | MTR_7g112390 | 62.025 | 237 | 46 | 6 | 524 | 750 | 472 | 674 | 2.21e-71 | 247 |
| MS.gene072483.t1 | MTR_7g108470 | 46.608 | 339 | 163 | 4 | 67 | 389 | 139 | 475 | 4.42e-91 | 305 |
| MS.gene072483.t1 | MTR_3g049350 | 63.415 | 246 | 68 | 4 | 265 | 508 | 3 | 228 | 7.85e-87 | 275 |
| MS.gene072483.t1 | MTR_3g049350 | 62.667 | 75 | 27 | 1 | 575 | 648 | 174 | 248 | 6.75e-21 | 93.6 |
| MS.gene072483.t1 | MTR_4g119630 | 41.962 | 367 | 155 | 8 | 20 | 335 | 38 | 397 | 2.42e-79 | 262 |
| MS.gene072483.t1 | MTR_2g436970 | 39.308 | 318 | 166 | 11 | 13 | 316 | 4 | 308 | 3.59e-58 | 204 |
| MS.gene072483.t1 | MTR_7g113290 | 66.116 | 121 | 34 | 3 | 512 | 625 | 7 | 127 | 3.83e-38 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072483.t1 | AT1G09040 | 35.821 | 737 | 357 | 22 | 50 | 724 | 122 | 804 | 3.37e-103 | 338 |
| MS.gene072483.t1 | AT1G09050 | 35.586 | 725 | 351 | 23 | 71 | 731 | 143 | 815 | 2.30e-97 | 322 |
| MS.gene072483.t1 | AT1G09050 | 35.586 | 725 | 351 | 23 | 71 | 731 | 143 | 815 | 2.30e-97 | 322 |
| MS.gene072483.t1 | AT2G47820 | 37.174 | 460 | 198 | 13 | 19 | 392 | 31 | 485 | 1.46e-78 | 269 |
| MS.gene072483.t1 | AT2G47820 | 37.174 | 460 | 198 | 13 | 19 | 392 | 31 | 485 | 1.46e-78 | 269 |
| MS.gene072483.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 9.41e-77 | 266 |
| MS.gene072483.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 9.41e-77 | 266 |
Find 152 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATTTCAAAGTCGTTTA+TGG | 0.134164 | 7.3:-3661659 | MS.gene072483:intron |
| GCGGAAAGTCATCTGCTTTA+AGG | 0.171768 | 7.3:-3661003 | MS.gene072483:CDS |
| ATCATTATAATTCTGGTTAA+AGG | 0.201090 | 7.3:+3662871 | None:intergenic |
| TGAAAATATCATTATAATTC+TGG | 0.213867 | 7.3:+3662864 | None:intergenic |
| CTTTGCCGACTTCTGTTTAA+TGG | 0.228638 | 7.3:+3660862 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.3:-3660072 | MS.gene072483:CDS |
| CGCATTGTTGAGAATTCTTC+AGG | 0.254199 | 7.3:-3660437 | MS.gene072483:CDS |
| CCAAAAGTAATGATCTCTTC+TGG | 0.256574 | 7.3:-3661408 | MS.gene072483:CDS |
| TGTTACCTCCAATGATTATC+TGG | 0.258416 | 7.3:-3661320 | MS.gene072483:CDS |
| TCCAATGCTCTAACTGTTAA+TGG | 0.262771 | 7.3:+3660002 | None:intergenic |
| GTCAATTTCCTCCGTTTAAT+AGG | 0.265888 | 7.3:+3660485 | None:intergenic |
| AGCTGTTTGGCCTCGCTTGC+TGG | 0.271118 | 7.3:-3661383 | MS.gene072483:CDS |
| TTCAATATTTGACAGGATTT+CGG | 0.272657 | 7.3:-3661441 | MS.gene072483:CDS |
| TAGTTGGACCACAAACATTT+TGG | 0.284443 | 7.3:+3660372 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.309396 | 7.3:-3661478 | MS.gene072483:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.3:-3661396 | MS.gene072483:CDS |
| GTTGCCTCGGTCCGGCAAAA+AGG | 0.319814 | 7.3:+3662456 | None:intergenic |
| CCAGAAGAGATCATTACTTT+TGG | 0.323183 | 7.3:+3661408 | None:intergenic |
| ACTTTAGGCACTGAATTAAC+AGG | 0.335113 | 7.3:+3660965 | None:intergenic |
| TGAAAGGATCTTGGTGTGTC+TGG | 0.338299 | 7.3:+3659925 | None:intergenic |
| TCTTTGAGCACGAGAATATT+CGG | 0.365137 | 7.3:+3661193 | None:intergenic |
| CGGAAAGTCATCTGCTTTAA+GGG | 0.369059 | 7.3:-3661002 | MS.gene072483:CDS |
| CATGGTTATTGATACCAGTT+TGG | 0.371834 | 7.3:-3661032 | MS.gene072483:CDS |
| CCTATTCGAGGACTGAATTC+AGG | 0.372601 | 7.3:+3662818 | None:intergenic |
| TGCTTCTCGGGAAGTGGTTA+AGG | 0.374030 | 7.3:-3660108 | MS.gene072483:CDS |
| CTCATTGCAGCTACCAACTT+TGG | 0.379784 | 7.3:+3661159 | None:intergenic |
| TGTCTCCTCGGATTCATATC+AGG | 0.382635 | 7.3:+3660041 | None:intergenic |
| AATGAGGAAGAGCCAGAAAA+TGG | 0.392377 | 7.3:-3661142 | MS.gene072483:CDS |
| TAAAGATCATATCAAATTCA+TGG | 0.393568 | 7.3:-3661050 | MS.gene072483:CDS |
| CACCTCTGCACCCATCAGTT+TGG | 0.395218 | 7.3:+3660633 | None:intergenic |
| GAGAATTCTTCAGGATGTTT+AGG | 0.396514 | 7.3:-3660428 | MS.gene072483:CDS |
| ACTAGGCTTGGCATGGAACC+TGG | 0.407506 | 7.3:-3661532 | MS.gene072483:CDS |
| CATGTCTAACATCTGCTTCT+CGG | 0.417095 | 7.3:-3660121 | MS.gene072483:CDS |
| TGGTCTTCTGAGAGATAGTA+AGG | 0.418389 | 7.3:-3660729 | MS.gene072483:CDS |
| CTCTTAGCTTCCACCTTCCT+CGG | 0.419232 | 7.3:+3660683 | None:intergenic |
| AAAGGGAGAAAATGTATGAT+AGG | 0.419409 | 7.3:-3662485 | MS.gene072483:CDS |
| TCATTCTGCTGATGACTAGT+TGG | 0.422211 | 7.3:+3660356 | None:intergenic |
| CTTTAGGCCTTGCTCATCTT+CGG | 0.428940 | 7.3:+3660154 | None:intergenic |
| CAAAAGTAATGATCTCTTCT+GGG | 0.437354 | 7.3:-3661407 | MS.gene072483:CDS |
| TCTGATTTCACAATCATAGA+AGG | 0.440778 | 7.3:+3662773 | None:intergenic |
| GAAGCATCTTCTAATTCAAC+TGG | 0.445905 | 7.3:+3660764 | None:intergenic |
| CTTTCCGCCATGCACCAAAC+TGG | 0.447484 | 7.3:+3661018 | None:intergenic |
| ATGCAGCTGTTCCTATTAAA+CGG | 0.448083 | 7.3:-3660496 | MS.gene072483:CDS |
| CAGGATGTTTAGGCTTCTCT+CGG | 0.448262 | 7.3:-3660418 | MS.gene072483:CDS |
| ATGTCTAACATCTGCTTCTC+GGG | 0.448570 | 7.3:-3660120 | MS.gene072483:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.3:+3661337 | None:intergenic |
| TTTACTGTAAGTAGAAGATC+GGG | 0.451792 | 7.3:+3661069 | None:intergenic |
| CCTGAATTCAGTCCTCGAAT+AGG | 0.459730 | 7.3:-3662818 | MS.gene072483:CDS |
| GAGATAATTCAATATTTGAC+AGG | 0.461702 | 7.3:-3661448 | MS.gene072483:CDS |
| AAACTGATGGATATCTTAGA+TGG | 0.462004 | 7.3:-3662526 | MS.gene072483:CDS |
| ATCTTAGATGGTCGAAGTGC+AGG | 0.466134 | 7.3:-3662514 | MS.gene072483:CDS |
| CTCGCTTGCTGGCAAGAGGT+TGG | 0.466892 | 7.3:-3661372 | MS.gene072483:CDS |
| TTGAGAATCCCTTGTGATGT+TGG | 0.468399 | 7.3:-3660080 | MS.gene072483:CDS |
| AGCAGACAGAAGTGTGGAAG+AGG | 0.472115 | 7.3:-3660318 | MS.gene072483:CDS |
| GACTCATTCGAAGCGAAAGC+TGG | 0.474737 | 7.3:+3662750 | None:intergenic |
| AACAATTCACCGAGAACAAA+GGG | 0.476097 | 7.3:-3662589 | MS.gene072483:CDS |
| GATGCAAACCAAAATGTTTG+TGG | 0.482630 | 7.3:-3660380 | MS.gene072483:CDS |
| CTTGTGGAAGCTGTAGGTAT+TGG | 0.492402 | 7.3:-3661574 | MS.gene072483:CDS |
| TAGTTCATGTTGCCTCGGTC+CGG | 0.493742 | 7.3:+3662448 | None:intergenic |
| AAAGCTTTGCAAGCTGGTGC+AGG | 0.494056 | 7.3:+3661490 | None:intergenic |
| AACGCTTGAACGTCCTTCCC+AGG | 0.495754 | 7.3:+3661514 | None:intergenic |
| TTTCTAGAGCTCTGTCTCCT+CGG | 0.499320 | 7.3:+3660029 | None:intergenic |
| GAAGACAAAGCTTTGCAAGC+TGG | 0.500111 | 7.3:+3661484 | None:intergenic |
| CCAACATCTACCTCCACTTT+AGG | 0.500316 | 7.3:+3660950 | None:intergenic |
| GTTCCATGCCAAGCCTAGTA+AGG | 0.502669 | 7.3:+3661536 | None:intergenic |
| TGTAGGTATTGGCAAGGAGA+AGG | 0.502796 | 7.3:-3661563 | MS.gene072483:CDS |
| GGCAAGGACTGAAAGGATCT+TGG | 0.502833 | 7.3:+3659916 | None:intergenic |
| AACATCTGCTTCTCGGGAAG+TGG | 0.504803 | 7.3:-3660114 | MS.gene072483:CDS |
| CGAAGATGAGCAAGGCCTAA+AGG | 0.505503 | 7.3:-3660153 | MS.gene072483:CDS |
| CTTTACTGTAAGTAGAAGAT+CGG | 0.506445 | 7.3:+3661068 | None:intergenic |
| ACCATTAACAGTTAGAGCAT+TGG | 0.508438 | 7.3:-3660003 | MS.gene072483:CDS |
| AATTGATGATTCACCGAGGA+AGG | 0.510840 | 7.3:-3660696 | MS.gene072483:CDS |
| ATCACTCCATGTGTCTGAGA+TGG | 0.517171 | 7.3:+3662673 | None:intergenic |
| TTCATGGACCATACGTCTGA+TGG | 0.518088 | 7.3:-3662845 | MS.gene072483:CDS |
| TCGAATAGGTCATGCATACC+AGG | 0.522827 | 7.3:-3662804 | MS.gene072483:CDS |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.3:+3661286 | None:intergenic |
| CAACCTCTTGCCAGCAAGCG+AGG | 0.527263 | 7.3:+3661373 | None:intergenic |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.3:-3661268 | MS.gene072483:CDS |
| ATTGATACCAGTTTGGTGCA+TGG | 0.532780 | 7.3:-3661025 | MS.gene072483:CDS |
| GTAGGTATTGGCAAGGAGAA+GGG | 0.533715 | 7.3:-3661562 | MS.gene072483:CDS |
| TTGAAGTCTACTGTTGAACT+TGG | 0.533877 | 7.3:-3661601 | MS.gene072483:CDS |
| GAAGAAGAAGAAGCCAAAGT+TGG | 0.537968 | 7.3:-3661172 | MS.gene072483:CDS |
| TCCTTTCAGTCCTTGCCGCA+AGG | 0.543859 | 7.3:-3659910 | MS.gene072483:CDS |
| TGTTAATTCAGTGCCTAAAG+TGG | 0.547470 | 7.3:-3660963 | MS.gene072483:CDS |
| TGAACATCTTCTGAATCAGC+AGG | 0.549114 | 7.3:+3662728 | None:intergenic |
| CTAGGCTTGGCATGGAACCT+GGG | 0.550586 | 7.3:-3661531 | MS.gene072483:CDS |
| GCTTGGCATGGAACCTGGGA+AGG | 0.551229 | 7.3:-3661527 | MS.gene072483:CDS |
| TTTCACCTTCAACATACCTC+AGG | 0.551354 | 7.3:-3660219 | MS.gene072483:CDS |
| TTCAATCAGAGAGTTAGATC+AGG | 0.551942 | 7.3:-3660530 | MS.gene072483:CDS |
| TGTTGAACTTGGCGTACTTG+TGG | 0.555243 | 7.3:-3661590 | MS.gene072483:CDS |
| CGAGGAAGGTGGAAGCTAAG+AGG | 0.555775 | 7.3:-3660682 | MS.gene072483:CDS |
| TGGCCTCGCTTGCTGGCAAG+AGG | 0.555857 | 7.3:-3661376 | MS.gene072483:CDS |
| GACAATAGTTCATGTTGCCT+CGG | 0.558165 | 7.3:+3662443 | None:intergenic |
| TCACTCCATGTGTCTGAGAT+GGG | 0.562681 | 7.3:+3662674 | None:intergenic |
| TTCACCGAGAACAAAGGGAT+GGG | 0.565277 | 7.3:-3662584 | MS.gene072483:CDS |
| GCCTTGCGGCAAGGACTGAA+AGG | 0.566399 | 7.3:+3659909 | None:intergenic |
| TAGGTATTGGCAAGGAGAAG+GGG | 0.568358 | 7.3:-3661561 | MS.gene072483:CDS |
| TGGTATGCATGACCTATTCG+AGG | 0.570623 | 7.3:+3662806 | None:intergenic |
| AAAATATCAACCAAACTGAT+GGG | 0.570703 | 7.3:-3660643 | MS.gene072483:CDS |
| TCACCGAGAACAAAGGGATG+GGG | 0.571170 | 7.3:-3662583 | MS.gene072483:CDS |
| GATGCTTCTACGATGACTAC+TGG | 0.571992 | 7.3:-3660749 | MS.gene072483:CDS |
| CATGTACGAGCCTTGCGGCA+AGG | 0.572654 | 7.3:+3659900 | None:intergenic |
| GGACCTTACTAGGCTTGGCA+TGG | 0.573430 | 7.3:-3661539 | MS.gene072483:CDS |
| CGAGAAGCAGATGTTAGACA+TGG | 0.576793 | 7.3:+3660122 | None:intergenic |
| CAGGATCTCCATCAGACGTA+TGG | 0.578249 | 7.3:+3662837 | None:intergenic |
| TGCCGCAAGGCTCGTACATG+AGG | 0.578280 | 7.3:-3659897 | None:intergenic |
| ATTTCAAAGTCGTTTATGGA+GGG | 0.578872 | 7.3:-3661655 | MS.gene072483:CDS |
| CACTAACAGAATCAAAGTAA+TGG | 0.579542 | 7.3:+3661242 | None:intergenic |
| TAAAACCATTAAACAGAAGT+CGG | 0.581290 | 7.3:-3660867 | MS.gene072483:CDS |
| AAATATTGAATTATCTCACT+AGG | 0.581479 | 7.3:+3661454 | None:intergenic |
| GATTTCAAAGTCGTTTATGG+AGG | 0.583379 | 7.3:-3661656 | MS.gene072483:CDS |
| TGATGATTCACCGAGGAAGG+TGG | 0.590215 | 7.3:-3660693 | MS.gene072483:CDS |
| GATACCAATAGACTTTCTGA+AGG | 0.590512 | 7.3:-3660827 | MS.gene072483:CDS |
| AAATAGCAAAACAGTAGCAA+TGG | 0.591008 | 7.3:-3660180 | MS.gene072483:CDS |
| TCATAGAAGGAATTTCTGCC+TGG | 0.593937 | 7.3:+3662786 | None:intergenic |
| AAGTAGAAGATCGGGGCTTG+AGG | 0.596284 | 7.3:+3661077 | None:intergenic |
| AAACAATTCACCGAGAACAA+AGG | 0.596800 | 7.3:-3662590 | MS.gene072483:CDS |
| ATGGCAGCCGAAGATGAGCA+AGG | 0.597264 | 7.3:-3660161 | MS.gene072483:CDS |
| GATGGGTAAATCAATTGCAA+AGG | 0.601126 | 7.3:+3662691 | None:intergenic |
| ATGCTCTAACTGTTAATGGT+CGG | 0.603464 | 7.3:+3660006 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.604418 | 7.3:+3660071 | None:intergenic |
| CACCGAGAACAAAGGGATGG+GGG | 0.606182 | 7.3:-3662582 | MS.gene072483:CDS |
| ATTCACCGAGAACAAAGGGA+TGG | 0.612425 | 7.3:-3662585 | MS.gene072483:CDS |
| TCAAAGTCGTTTATGGAGGG+CGG | 0.617461 | 7.3:-3661652 | MS.gene072483:CDS |
| TGGTGCCTGAGGTATGTTGA+AGG | 0.618245 | 7.3:+3660214 | None:intergenic |
| AGGGCTTAAATATACGAGGA+AGG | 0.621529 | 7.3:-3660912 | MS.gene072483:CDS |
| TGCCTCATGTACGAGCCTTG+CGG | 0.621550 | 7.3:+3659895 | None:intergenic |
| TCAGACTTCGATGGTGCCTG+AGG | 0.621736 | 7.3:+3660203 | None:intergenic |
| AACCAAACTGATGGGTGCAG+AGG | 0.625427 | 7.3:-3660635 | MS.gene072483:CDS |
| ATTTACCCATCTCAGACACA+TGG | 0.629487 | 7.3:-3662679 | MS.gene072483:CDS |
| AGGTATTGGCAAGGAGAAGG+GGG | 0.636528 | 7.3:-3661560 | MS.gene072483:CDS |
| ACATCACAAGGGATTCTCAA+AGG | 0.640112 | 7.3:+3660083 | None:intergenic |
| GAGGAAGGTAAACCATAGCA+AGG | 0.643269 | 7.3:-3660897 | MS.gene072483:CDS |
| CAAAGTTGGTAGCTGCAATG+AGG | 0.643587 | 7.3:-3661158 | MS.gene072483:CDS |
| TAATTCAGTGCCTAAAGTGG+AGG | 0.644027 | 7.3:-3660960 | MS.gene072483:CDS |
| GGTCTTCTGAGAGATAGTAA+GGG | 0.645473 | 7.3:-3660728 | MS.gene072483:CDS |
| GGAAGCTGTAGGTATTGGCA+AGG | 0.646688 | 7.3:-3661569 | MS.gene072483:CDS |
| CTTCTGAGAGATAGTAAGGG+TGG | 0.653143 | 7.3:-3660725 | MS.gene072483:CDS |
| GGCGTACTTGTGGAAGCTGT+AGG | 0.654942 | 7.3:-3661580 | MS.gene072483:CDS |
| CCTAAAGTGGAGGTAGATGT+TGG | 0.657169 | 7.3:-3660950 | MS.gene072483:CDS |
| AACAGCCTGATATGAATCCG+AGG | 0.663816 | 7.3:-3660046 | MS.gene072483:CDS |
| TTCTTCAGCAGACAGAAGTG+TGG | 0.665376 | 7.3:-3660324 | MS.gene072483:CDS |
| GATACCAGTTTGGTGCATGG+CGG | 0.678268 | 7.3:-3661022 | MS.gene072483:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.3:-3661346 | MS.gene072483:CDS |
| CAGCTGTTCCTATTAAACGG+AGG | 0.715033 | 7.3:-3660493 | MS.gene072483:CDS |
| TGCAGAGGTGTATCTAACAG+TGG | 0.716698 | 7.3:-3660620 | MS.gene072483:CDS |
| ATAAAGGGCTTAAATATACG+AGG | 0.718352 | 7.3:-3660916 | MS.gene072483:CDS |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 7.3:+3660438 | None:intergenic |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.3:+3660072 | None:intergenic |
| TTACTGTAAGTAGAAGATCG+GGG | 0.727493 | 7.3:+3661070 | None:intergenic |
| TTGATAATAATCAATTGACG+AGG | 0.738361 | 7.3:-3660568 | MS.gene072483:CDS |
| CTTCAATTGATGATTCACCG+AGG | 0.774642 | 7.3:-3660700 | MS.gene072483:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAAT+TGG | + | chr7.3:3661055-3661074 | None:intergenic | 0.0% |
| !! | TGAAAATATCATTATAATTC+TGG | + | chr7.3:3659916-3659935 | None:intergenic | 15.0% |
| !! | TTGGTTGTAAAAAATATAAA+GGG | - | chr7.3:3661846-3661865 | MS.gene072483:intron | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.3:3659916-3659935 | MS.gene072483:CDS | 15.0% |
| !! | AAATATTGAATTATCTCACT+AGG | + | chr7.3:3661326-3661345 | None:intergenic | 20.0% |
| !! | CATAGAACTTCAAATAATTA+TGG | + | chr7.3:3661000-3661019 | None:intergenic | 20.0% |
| !! | GTTAATAAATCTGCAAAATA+TGG | + | chr7.3:3660735-3660754 | None:intergenic | 20.0% |
| !! | GTTGGTTGTAAAAAATATAA+AGG | - | chr7.3:3661845-3661864 | MS.gene072483:intron | 20.0% |
| !! | TAAAGATCATATCAAATTCA+TGG | - | chr7.3:3661727-3661746 | MS.gene072483:intron | 20.0% |
| !!! | AAGGCTATATTTAAAATTAC+AGG | + | chr7.3:3660607-3660626 | None:intergenic | 20.0% |
| !!! | ATCATTATAATTCTGGTTAA+AGG | + | chr7.3:3659909-3659928 | None:intergenic | 20.0% |
| !!! | GAAATACTTTCATTTTACTA+TGG | - | chr7.3:3660217-3660236 | MS.gene072483:CDS | 20.0% |
| ! | AAAAATATCAACCAAACTGA+TGG | - | chr7.3:3662133-3662152 | MS.gene072483:intron | 25.0% |
| ! | AAAATATCAACCAAACTGAT+GGG | - | chr7.3:3662134-3662153 | MS.gene072483:intron | 25.0% |
| ! | AAGAAAAACCAGATAATCAT+TGG | + | chr7.3:3661468-3661487 | None:intergenic | 25.0% |
| ! | AATAAAAGTCACTAGGAATA+AGG | - | chr7.3:3660765-3660784 | MS.gene072483:CDS | 25.0% |
| ! | ATAAAAGTCACTAGGAATAA+GGG | - | chr7.3:3660766-3660785 | MS.gene072483:CDS | 25.0% |
| ! | ATGCAATTCATTAACAATAG+AGG | + | chr7.3:3660439-3660458 | None:intergenic | 25.0% |
| ! | GAGATAATTCAATATTTGAC+AGG | - | chr7.3:3661329-3661348 | MS.gene072483:CDS | 25.0% |
| ! | GTAAAAGAATAAAAGTCACT+AGG | - | chr7.3:3660758-3660777 | MS.gene072483:CDS | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | + | chr7.3:3661098-3661117 | None:intergenic | 25.0% |
| ! | TAAAACCATTAAACAGAAGT+CGG | - | chr7.3:3661910-3661929 | MS.gene072483:intron | 25.0% |
| ! | TAGTTACAATGTAATTACGA+TGG | - | chr7.3:3660939-3660958 | MS.gene072483:CDS | 25.0% |
| ! | TGGAGTGATTTAAAGAAAAA+GGG | + | chr7.3:3661035-3661054 | None:intergenic | 25.0% |
| ! | TTCAATATTTGACAGGATTT+CGG | - | chr7.3:3661336-3661355 | MS.gene072483:CDS | 25.0% |
| ! | TTGGAGTGATTTAAAGAAAA+AGG | + | chr7.3:3661036-3661055 | None:intergenic | 25.0% |
| !! | ATTATCATGTGTCTTTTTAC+TGG | + | chr7.3:3662188-3662207 | None:intergenic | 25.0% |
| !! | ATTTTGCTTTAACAGTAATC+TGG | - | chr7.3:3660673-3660692 | MS.gene072483:CDS | 25.0% |
| !! | GTGACTTTTATTCTTTTACA+TGG | + | chr7.3:3660757-3660776 | None:intergenic | 25.0% |
| !! | TTGATAATAATCAATTGACG+AGG | - | chr7.3:3662209-3662228 | MS.gene072483:intron | 25.0% |
| !!! | GATACAAATAGTTTTGTACT+AGG | - | chr7.3:3660130-3660149 | MS.gene072483:CDS | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+CGG | - | chr7.3:3660145-3660164 | MS.gene072483:CDS | 25.0% |
| !!! | TACTAGGTTTGTTTATTTTC+GGG | - | chr7.3:3660146-3660165 | MS.gene072483:CDS | 25.0% |
| AAAAACCAGATAATCATTGG+AGG | + | chr7.3:3661465-3661484 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+AGG | - | chr7.3:3660292-3660311 | MS.gene072483:CDS | 30.0% | |
| AAATAGCAAAACAGTAGCAA+TGG | - | chr7.3:3662597-3662616 | MS.gene072483:CDS | 30.0% | |
| AATATTATCACACTTCGAGA+AGG | + | chr7.3:3660639-3660658 | None:intergenic | 30.0% | |
| ACAGATTTCAAAGTCGTTTA+TGG | - | chr7.3:3661118-3661137 | MS.gene072483:CDS | 30.0% | |
| ACCACTAAATGTGATCATAT+AGG | + | chr7.3:3660496-3660515 | None:intergenic | 30.0% | |
| ACTAGCAAAGAAATTCACAT+TGG | + | chr7.3:3660565-3660584 | None:intergenic | 30.0% | |
| ATAAAGGGCTTAAATATACG+AGG | - | chr7.3:3661861-3661880 | MS.gene072483:intron | 30.0% | |
| ATTTCAAAGTCGTTTATGGA+GGG | - | chr7.3:3661122-3661141 | MS.gene072483:CDS | 30.0% | |
| CAAAAGTAATGATCTCTTCT+GGG | - | chr7.3:3661370-3661389 | MS.gene072483:CDS | 30.0% | |
| CAAATAATTATGGTATGTCG+CGG | + | chr7.3:3660990-3661009 | None:intergenic | 30.0% | |
| CACTAACAGAATCAAAGTAA+TGG | + | chr7.3:3661538-3661557 | None:intergenic | 30.0% | |
| CTTTACTGTAAGTAGAAGAT+CGG | + | chr7.3:3661712-3661731 | None:intergenic | 30.0% | |
| TAAGGGACTAAATTATCTGT+TGG | - | chr7.3:3660783-3660802 | MS.gene072483:CDS | 30.0% | |
| TCTGATTTCACAATCATAGA+AGG | + | chr7.3:3660007-3660026 | None:intergenic | 30.0% | |
| TTTACTGTAAGTAGAAGATC+GGG | + | chr7.3:3661711-3661730 | None:intergenic | 30.0% | |
| ! | AAACTGATGGATATCTTAGA+TGG | - | chr7.3:3660251-3660270 | MS.gene072483:CDS | 30.0% |
| ! | GACTTCTGTTTAATGGTTTT+AGG | + | chr7.3:3661911-3661930 | None:intergenic | 30.0% |
| ! | GATTTAAAGAAAAAGGGTAC+TGG | + | chr7.3:3661029-3661048 | None:intergenic | 30.0% |
| ! | GGAAAGTTTTACAAAACTGA+TGG | - | chr7.3:3660238-3660257 | MS.gene072483:CDS | 30.0% |
| ! | TAACAGTAATCTGGTTTATG+TGG | - | chr7.3:3660682-3660701 | MS.gene072483:CDS | 30.0% |
| ! | TCTTCATTTGATCCATTTTC+TGG | + | chr7.3:3661650-3661669 | None:intergenic | 30.0% |
| ! | TCTTTCTTTTTCTGTCTCTT+TGG | + | chr7.3:3662829-3662848 | None:intergenic | 30.0% |
| ! | TTTTCCTTCAGAAAGTCTAT+TGG | + | chr7.3:3661957-3661976 | None:intergenic | 30.0% |
| !! | TGCATTTTATTTATGAGCTC+CGG | - | chr7.3:3660809-3660828 | MS.gene072483:CDS | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+TGG | - | chr7.3:3661473-3661492 | MS.gene072483:CDS | 30.0% |
| AAACAATTCACCGAGAACAA+AGG | - | chr7.3:3660187-3660206 | MS.gene072483:CDS | 35.0% | |
| AACAATTCACCGAGAACAAA+GGG | - | chr7.3:3660188-3660207 | MS.gene072483:CDS | 35.0% | |
| ACCATTAACAGTTAGAGCAT+TGG | - | chr7.3:3662774-3662793 | MS.gene072483:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+CGG | - | chr7.3:3662281-3662300 | MS.gene072483:intron | 35.0% | |
| ATGCTCTAACTGTTAATGGT+CGG | + | chr7.3:3662774-3662793 | None:intergenic | 35.0% | |
| ATTCCATTTGTCTGACAGAT+TGG | - | chr7.3:3660465-3660484 | MS.gene072483:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.3:3661745-3661764 | MS.gene072483:intron | 35.0% | |
| CCAAAAGTAATGATCTCTTC+TGG | - | chr7.3:3661369-3661388 | MS.gene072483:CDS | 35.0% | |
| CGGTAAAATGATAATTCGCT+CGG | + | chr7.3:3660970-3660989 | None:intergenic | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr7.3:3662342-3662361 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGGATGTTT+AGG | - | chr7.3:3662349-3662368 | MS.gene072483:intron | 35.0% | |
| GATACCAATAGACTTTCTGA+AGG | - | chr7.3:3661950-3661969 | MS.gene072483:intron | 35.0% | |
| GATGCAAACCAAAATGTTTG+TGG | - | chr7.3:3662397-3662416 | MS.gene072483:intron | 35.0% | |
| GATGGGTAAATCAATTGCAA+AGG | + | chr7.3:3660089-3660108 | None:intergenic | 35.0% | |
| GATTTCAAAGTCGTTTATGG+AGG | - | chr7.3:3661121-3661140 | MS.gene072483:CDS | 35.0% | |
| GCCTATATGATCACATTTAG+TGG | - | chr7.3:3660492-3660511 | MS.gene072483:CDS | 35.0% | |
| GTCAATTTCCTCCGTTTAAT+AGG | + | chr7.3:3662295-3662314 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.3:3661509-3661528 | MS.gene072483:CDS | 35.0% | |
| TCCAATGCTCTAACTGTTAA+TGG | + | chr7.3:3662778-3662797 | None:intergenic | 35.0% | |
| TCTTTGAGCACGAGAATATT+CGG | + | chr7.3:3661587-3661606 | None:intergenic | 35.0% | |
| TGTTAATTCAGTGCCTAAAG+TGG | - | chr7.3:3661814-3661833 | MS.gene072483:intron | 35.0% | |
| TGTTACCTCCAATGATTATC+TGG | - | chr7.3:3661457-3661476 | MS.gene072483:CDS | 35.0% | |
| TTACTGTAAGTAGAAGATCG+GGG | + | chr7.3:3661710-3661729 | None:intergenic | 35.0% | |
| TTCAATCAGAGAGTTAGATC+AGG | - | chr7.3:3662247-3662266 | MS.gene072483:intron | 35.0% | |
| TTCGAGAAGGAAGTTAAAGA+AGG | + | chr7.3:3660626-3660645 | None:intergenic | 35.0% | |
| TTGAAGTCTACTGTTGAACT+TGG | - | chr7.3:3661176-3661195 | MS.gene072483:CDS | 35.0% | |
| ! | ATAGGACATAACCTTTTTGC+CGG | - | chr7.3:3660310-3660329 | MS.gene072483:CDS | 35.0% |
| ! | ATGCTTAGATTGTTTCTCCT+AGG | - | chr7.3:3660835-3660854 | MS.gene072483:CDS | 35.0% |
| ! | CCAGAAGAGATCATTACTTT+TGG | + | chr7.3:3661372-3661391 | None:intergenic | 35.0% |
| ! | CTGAAAGCTTCACTAGTTTA+TGG | - | chr7.3:3660875-3660894 | MS.gene072483:CDS | 35.0% |
| ! | GAAGCATCTTCTAATTCAAC+TGG | + | chr7.3:3662016-3662035 | None:intergenic | 35.0% |
| ! | TAGTTGGACCACAAACATTT+TGG | + | chr7.3:3662408-3662427 | None:intergenic | 35.0% |
| !! | AAAGAAAAAGGGTACTGGTA+TGG | + | chr7.3:3661024-3661043 | None:intergenic | 35.0% |
| !! | ACTTTAGGCACTGAATTAAC+AGG | + | chr7.3:3661815-3661834 | None:intergenic | 35.0% |
| !! | GCATTTTATTTATGAGCTCC+GGG | - | chr7.3:3660810-3660829 | MS.gene072483:CDS | 35.0% |
| !!! | TTGCTATTTTCAGACTTCGA+TGG | + | chr7.3:3662586-3662605 | None:intergenic | 35.0% |
| AAGCCAATCTGTCAGACAAA+TGG | + | chr7.3:3660471-3660490 | None:intergenic | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+TGG | - | chr7.3:3661635-3661654 | MS.gene072483:CDS | 40.0% | |
| ACATCACAAGGGATTCTCAA+AGG | + | chr7.3:3662697-3662716 | None:intergenic | 40.0% | |
| AGGGCTTAAATATACGAGGA+AGG | - | chr7.3:3661865-3661884 | MS.gene072483:intron | 40.0% | |
| ATGTCTAACATCTGCTTCTC+GGG | - | chr7.3:3662657-3662676 | MS.gene072483:CDS | 40.0% | |
| ATTTACCCATCTCAGACACA+TGG | - | chr7.3:3660098-3660117 | MS.gene072483:CDS | 40.0% | |
| CATGTCTAACATCTGCTTCT+CGG | - | chr7.3:3662656-3662675 | MS.gene072483:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | + | chr7.3:3662708-3662727 | None:intergenic | 40.0% | |
| CGAAGTGCAGGAAGAAAAAA+GGG | - | chr7.3:3660275-3660294 | MS.gene072483:CDS | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr7.3:3662340-3662359 | MS.gene072483:intron | 40.0% | |
| CGGAAAGTCATCTGCTTTAA+GGG | - | chr7.3:3661775-3661794 | MS.gene072483:intron | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | + | chr7.3:3661494-3661513 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGCCAAAGT+TGG | - | chr7.3:3661605-3661624 | MS.gene072483:CDS | 40.0% | |
| GACAATAGTTCATGTTGCCT+CGG | + | chr7.3:3660337-3660356 | None:intergenic | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.3:3661443-3661462 | None:intergenic | 40.0% | |
| TAATTCAGTGCCTAAAGTGG+AGG | - | chr7.3:3661817-3661836 | MS.gene072483:intron | 40.0% | |
| TCATAGAAGGAATTTCTGCC+TGG | + | chr7.3:3659994-3660013 | None:intergenic | 40.0% | |
| TCATTCTGCTGATGACTAGT+TGG | + | chr7.3:3662424-3662443 | None:intergenic | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | + | chr7.3:3662709-3662728 | None:intergenic | 40.0% | |
| TCGAAGTGCAGGAAGAAAAA+AGG | - | chr7.3:3660274-3660293 | MS.gene072483:CDS | 40.0% | |
| TGAACATCTTCTGAATCAGC+AGG | + | chr7.3:3660052-3660071 | None:intergenic | 40.0% | |
| TTGAGAATCCCTTGTGATGT+TGG | - | chr7.3:3662697-3662716 | MS.gene072483:CDS | 40.0% | |
| TTTCACCTTCAACATACCTC+AGG | - | chr7.3:3662558-3662577 | MS.gene072483:CDS | 40.0% | |
| ! | AATTGATGATTCACCGAGGA+AGG | - | chr7.3:3662081-3662100 | MS.gene072483:intron | 40.0% |
| ! | CTTCAATTGATGATTCACCG+AGG | - | chr7.3:3662077-3662096 | MS.gene072483:intron | 40.0% |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr7.3:3662642-3662661 | None:intergenic | 40.0% |
| ! | GGTCTTCTGAGAGATAGTAA+GGG | - | chr7.3:3662049-3662068 | MS.gene072483:intron | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.3:3661299-3661318 | MS.gene072483:CDS | 40.0% |
| ! | TGGTCTTCTGAGAGATAGTA+AGG | - | chr7.3:3662048-3662067 | MS.gene072483:intron | 40.0% |
| !! | ATTGATACCAGTTTGGTGCA+TGG | - | chr7.3:3661752-3661771 | MS.gene072483:intron | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | - | chr7.3:3661492-3661511 | MS.gene072483:CDS | 40.0% |
| !! | CTTTGCCGACTTCTGTTTAA+TGG | + | chr7.3:3661918-3661937 | None:intergenic | 40.0% |
| AACAGCCTGATATGAATCCG+AGG | - | chr7.3:3662731-3662750 | MS.gene072483:CDS | 45.0% | |
| ATCACTCCATGTGTCTGAGA+TGG | + | chr7.3:3660107-3660126 | None:intergenic | 45.0% | |
| ATCTCAAGATGCTCTGTCAC+AGG | - | chr7.3:3660384-3660403 | MS.gene072483:CDS | 45.0% | |
| ATCTTAGATGGTCGAAGTGC+AGG | - | chr7.3:3660263-3660282 | MS.gene072483:CDS | 45.0% | |
| ATTCACCGAGAACAAAGGGA+TGG | - | chr7.3:3660192-3660211 | MS.gene072483:CDS | 45.0% | |
| CAGCTGTTCCTATTAAACGG+AGG | - | chr7.3:3662284-3662303 | MS.gene072483:intron | 45.0% | |
| CAGGATGTTTAGGCTTCTCT+CGG | - | chr7.3:3662359-3662378 | MS.gene072483:intron | 45.0% | |
| CCAACATCTACCTCCACTTT+AGG | + | chr7.3:3661830-3661849 | None:intergenic | 45.0% | |
| CCTAAAGTGGAGGTAGATGT+TGG | - | chr7.3:3661827-3661846 | MS.gene072483:intron | 45.0% | |
| CCTATTCGAGGACTGAATTC+AGG | + | chr7.3:3659962-3659981 | None:intergenic | 45.0% | |
| CCTGAATTCAGTCCTCGAAT+AGG | - | chr7.3:3659959-3659978 | MS.gene072483:CDS | 45.0% | |
| CGAGAAGCAGATGTTAGACA+TGG | + | chr7.3:3662658-3662677 | None:intergenic | 45.0% | |
| CTCATTGCAGCTACCAACTT+TGG | + | chr7.3:3661621-3661640 | None:intergenic | 45.0% | |
| CTTGTGGAAGCTGTAGGTAT+TGG | - | chr7.3:3661203-3661222 | MS.gene072483:CDS | 45.0% | |
| CTTTAGGCCTTGCTCATCTT+CGG | + | chr7.3:3662626-3662645 | None:intergenic | 45.0% | |
| GAAGACAAAGCTTTGCAAGC+TGG | + | chr7.3:3661296-3661315 | None:intergenic | 45.0% | |
| GAGGAAGGTAAACCATAGCA+AGG | - | chr7.3:3661880-3661899 | MS.gene072483:intron | 45.0% | |
| GATGCTTCTACGATGACTAC+TGG | - | chr7.3:3662028-3662047 | MS.gene072483:intron | 45.0% | |
| GCGGAAAGTCATCTGCTTTA+AGG | - | chr7.3:3661774-3661793 | MS.gene072483:intron | 45.0% | |
| TCAAAGTCGTTTATGGAGGG+CGG | - | chr7.3:3661125-3661144 | MS.gene072483:CDS | 45.0% | |
| TCGAATAGGTCATGCATACC+AGG | - | chr7.3:3659973-3659992 | MS.gene072483:CDS | 45.0% | |
| TGAGATTCTTCAGAGACGTG+AGG | + | chr7.3:3660370-3660389 | None:intergenic | 45.0% | |
| TGGTATGCATGACCTATTCG+AGG | + | chr7.3:3659974-3659993 | None:intergenic | 45.0% | |
| TGTCTCCTCGGATTCATATC+AGG | + | chr7.3:3662739-3662758 | None:intergenic | 45.0% | |
| TGTTGAACTTGGCGTACTTG+TGG | - | chr7.3:3661187-3661206 | MS.gene072483:CDS | 45.0% | |
| TTCACCGAGAACAAAGGGAT+GGG | - | chr7.3:3660193-3660212 | MS.gene072483:CDS | 45.0% | |
| TTCATGGACCATACGTCTGA+TGG | - | chr7.3:3659932-3659951 | MS.gene072483:CDS | 45.0% | |
| TTCTTCAGCAGACAGAAGTG+TGG | - | chr7.3:3662453-3662472 | MS.gene072483:CDS | 45.0% | |
| ! | AATGCGGCTTTTCTCTGACT+TGG | + | chr7.3:3662326-3662345 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.3:3661381-3661400 | MS.gene072483:CDS | 45.0% |
| ! | CTTCTGAGAGATAGTAAGGG+TGG | - | chr7.3:3662052-3662071 | MS.gene072483:intron | 45.0% |
| ! | GAAACAATCTAAGCATCGCC+CGG | + | chr7.3:3660831-3660850 | None:intergenic | 45.0% |
| ! | TCACTCCATGTGTCTGAGAT+GGG | + | chr7.3:3660106-3660125 | None:intergenic | 45.0% |
| ! | TGAAAGGATCTTGGTGTGTC+TGG | + | chr7.3:3662855-3662874 | None:intergenic | 45.0% |
| ! | TGCAGAGGTGTATCTAACAG+TGG | - | chr7.3:3662157-3662176 | MS.gene072483:intron | 45.0% |
| ! | TTTGCAGCATCGAATTGCCT+AGG | + | chr7.3:3660855-3660874 | None:intergenic | 45.0% |
| ! | TTTTAGGCGCATCCTTGCTA+TGG | + | chr7.3:3661895-3661914 | None:intergenic | 45.0% |
| !! | CAAAGTTGGTAGCTGCAATG+AGG | - | chr7.3:3661619-3661638 | MS.gene072483:CDS | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | - | chr7.3:3662705-3662724 | MS.gene072483:CDS | 45.0% |
| !! | GTAGGTATTGGCAAGGAGAA+GGG | - | chr7.3:3661215-3661234 | MS.gene072483:CDS | 45.0% |
| !! | TAGGTATTGGCAAGGAGAAG+GGG | - | chr7.3:3661216-3661235 | MS.gene072483:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.3:3661431-3661450 | MS.gene072483:CDS | 45.0% |
| !! | TGTAGGTATTGGCAAGGAGA+AGG | - | chr7.3:3661214-3661233 | MS.gene072483:CDS | 45.0% |
| !! | TTTCTAGAGCTCTGTCTCCT+CGG | + | chr7.3:3662751-3662770 | None:intergenic | 45.0% |
| AAAGCTTTGCAAGCTGGTGC+AGG | + | chr7.3:3661290-3661309 | None:intergenic | 50.0% | |
| AACATCTGCTTCTCGGGAAG+TGG | - | chr7.3:3662663-3662682 | MS.gene072483:CDS | 50.0% | |
| AAGTAGAAGATCGGGGCTTG+AGG | + | chr7.3:3661703-3661722 | None:intergenic | 50.0% | |
| CAGGATCTCCATCAGACGTA+TGG | + | chr7.3:3659943-3659962 | None:intergenic | 50.0% | |
| CGAAGATGAGCAAGGCCTAA+AGG | - | chr7.3:3662624-3662643 | MS.gene072483:CDS | 50.0% | |
| CTCTTAGCTTCCACCTTCCT+CGG | + | chr7.3:3662097-3662116 | None:intergenic | 50.0% | |
| GACTCATTCGAAGCGAAAGC+TGG | + | chr7.3:3660030-3660049 | None:intergenic | 50.0% | |
| GGCAAGGACTGAAAGGATCT+TGG | + | chr7.3:3662864-3662883 | None:intergenic | 50.0% | |
| GTTCCATGCCAAGCCTAGTA+AGG | + | chr7.3:3661244-3661263 | None:intergenic | 50.0% | |
| TAGTTCATGTTGCCTCGGTC+CGG | + | chr7.3:3660332-3660351 | None:intergenic | 50.0% | |
| TCACCGAGAACAAAGGGATG+GGG | - | chr7.3:3660194-3660213 | MS.gene072483:CDS | 50.0% | |
| TGATGATTCACCGAGGAAGG+TGG | - | chr7.3:3662084-3662103 | MS.gene072483:intron | 50.0% | |
| TGCTTCTCGGGAAGTGGTTA+AGG | - | chr7.3:3662669-3662688 | MS.gene072483:CDS | 50.0% | |
| TGGTGCCTGAGGTATGTTGA+AGG | + | chr7.3:3662566-3662585 | None:intergenic | 50.0% | |
| TTCCCCCATCCCTTTGTTCT+CGG | + | chr7.3:3660200-3660219 | None:intergenic | 50.0% | |
| ! | AACCAAACTGATGGGTGCAG+AGG | - | chr7.3:3662142-3662161 | MS.gene072483:intron | 50.0% |
| ! | AGCAGACAGAAGTGTGGAAG+AGG | - | chr7.3:3662459-3662478 | MS.gene072483:CDS | 50.0% |
| ! | ATAACCTTTTTGCCGGACCG+AGG | - | chr7.3:3660317-3660336 | MS.gene072483:CDS | 50.0% |
| !! | AGGTATTGGCAAGGAGAAGG+GGG | - | chr7.3:3661217-3661236 | MS.gene072483:CDS | 50.0% |
| !! | GATACCAGTTTGGTGCATGG+CGG | - | chr7.3:3661755-3661774 | MS.gene072483:intron | 50.0% |
| !! | GGAAGCTGTAGGTATTGGCA+AGG | - | chr7.3:3661208-3661227 | MS.gene072483:CDS | 50.0% |
| AACGCTTGAACGTCCTTCCC+AGG | + | chr7.3:3661266-3661285 | None:intergenic | 55.0% | |
| AAGGGGGACCTTACTAGGCT+TGG | - | chr7.3:3661233-3661252 | MS.gene072483:CDS | 55.0% | |
| ACTAGGCTTGGCATGGAACC+TGG | - | chr7.3:3661245-3661264 | MS.gene072483:CDS | 55.0% | |
| AGGAGAAGGGGGACCTTACT+AGG | - | chr7.3:3661228-3661247 | MS.gene072483:CDS | 55.0% | |
| ATGGCAGCCGAAGATGAGCA+AGG | - | chr7.3:3662616-3662635 | MS.gene072483:CDS | 55.0% | |
| CACCGAGAACAAAGGGATGG+GGG | - | chr7.3:3660195-3660214 | MS.gene072483:CDS | 55.0% | |
| CACCTCTGCACCCATCAGTT+TGG | + | chr7.3:3662147-3662166 | None:intergenic | 55.0% | |
| CGAGGAAGGTGGAAGCTAAG+AGG | - | chr7.3:3662095-3662114 | MS.gene072483:intron | 55.0% | |
| CTAGGCTTGGCATGGAACCT+GGG | - | chr7.3:3661246-3661265 | MS.gene072483:CDS | 55.0% | |
| CTTTCCGCCATGCACCAAAC+TGG | + | chr7.3:3661762-3661781 | None:intergenic | 55.0% | |
| GGACCTTACTAGGCTTGGCA+TGG | - | chr7.3:3661238-3661257 | MS.gene072483:CDS | 55.0% | |
| GGCGTACTTGTGGAAGCTGT+AGG | - | chr7.3:3661197-3661216 | MS.gene072483:CDS | 55.0% | |
| TCAGACTTCGATGGTGCCTG+AGG | + | chr7.3:3662577-3662596 | None:intergenic | 55.0% | |
| TCCTTTCAGTCCTTGCCGCA+AGG | - | chr7.3:3662867-3662886 | MS.gene072483:CDS | 55.0% | |
| AGCTGTTTGGCCTCGCTTGC+TGG | - | chr7.3:3661394-3661413 | MS.gene072483:CDS | 60.0% | |
| CAACCTCTTGCCAGCAAGCG+AGG | + | chr7.3:3661407-3661426 | None:intergenic | 60.0% | |
| CATGTACGAGCCTTGCGGCA+AGG | + | chr7.3:3662880-3662899 | None:intergenic | 60.0% | |
| GCCTTGCGGCAAGGACTGAA+AGG | + | chr7.3:3662871-3662890 | None:intergenic | 60.0% | |
| GCTTGGCATGGAACCTGGGA+AGG | - | chr7.3:3661250-3661269 | MS.gene072483:CDS | 60.0% | |
| GTTGCCTCGGTCCGGCAAAA+AGG | + | chr7.3:3660324-3660343 | None:intergenic | 60.0% | |
| ! | CTCGCTTGCTGGCAAGAGGT+TGG | - | chr7.3:3661405-3661424 | MS.gene072483:CDS | 60.0% |
| ! | TGGCCTCGCTTGCTGGCAAG+AGG | - | chr7.3:3661401-3661420 | MS.gene072483:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3659899 | 3662900 | 3659899 | ID=MS.gene072483 |
| chr7.3 | mRNA | 3659899 | 3662900 | 3659899 | ID=MS.gene072483.t1;Parent=MS.gene072483 |
| chr7.3 | exon | 3662427 | 3662900 | 3662427 | ID=MS.gene072483.t1.exon1;Parent=MS.gene072483.t1 |
| chr7.3 | CDS | 3662427 | 3662900 | 3662427 | ID=cds.MS.gene072483.t1;Parent=MS.gene072483.t1 |
| chr7.3 | exon | 3659899 | 3661677 | 3659899 | ID=MS.gene072483.t1.exon2;Parent=MS.gene072483.t1 |
| chr7.3 | CDS | 3659899 | 3661677 | 3659899 | ID=cds.MS.gene072483.t1;Parent=MS.gene072483.t1 |
| Gene Sequence |
| Protein sequence |
