Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072482.t1 | RHN49267.1 | 92.7 | 749 | 53 | 2 | 1 | 749 | 26 | 772 | 0.00E+00 | 1348.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072482.t1 | G7KYL7 | 92.7 | 749 | 53 | 2 | 1 | 749 | 1 | 747 | 0.0e+00 | 1348.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29352 | MS.gene072482 | PPI |
| MS.gene050738 | MS.gene072482 | PPI |
| MS.gene050893 | MS.gene072482 | PPI |
| MS.gene072485 | MS.gene072482 | PPI |
| MS.gene050892 | MS.gene072482 | PPI |
| MS.gene78586 | MS.gene072482 | PPI |
| MS.gene072482 | MS.gene78586 | PPI |
| MS.gene072482 | MS.gene072485 | PPI |
| MS.gene78585 | MS.gene072482 | PPI |
| MS.gene65461 | MS.gene072482 | PPI |
| MS.gene072482 | MS.gene050892 | PPI |
| MS.gene78587 | MS.gene072482 | PPI |
| MS.gene29351 | MS.gene072482 | PPI |
| MS.gene050942 | MS.gene072482 | PPI |
| MS.gene050889 | MS.gene072482 | PPI |
| MS.gene053360 | MS.gene072482 | PPI |
| MS.gene054416 | MS.gene072482 | PPI |
| MS.gene072483 | MS.gene072482 | PPI |
| MS.gene072484 | MS.gene072482 | PPI |
| MS.gene050891 | MS.gene072482 | PPI |
| MS.gene67159 | MS.gene072482 | PPI |
| MS.gene072482 | MS.gene050891 | PPI |
| MS.gene063225 | MS.gene072482 | PPI |
| MS.gene072481 | MS.gene072482 | PPI |
| MS.gene072542 | MS.gene072482 | PPI |
| MS.gene050890 | MS.gene072482 | PPI |
| MS.gene78588 | MS.gene072482 | PPI |
| MS.gene29350 | MS.gene072482 | PPI |
| MS.gene78584 | MS.gene072482 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072482.t1 | MTR_7g113280 | 92.657 | 749 | 53 | 2 | 1 | 749 | 1 | 747 | 0.0 | 1425 |
| MS.gene072482.t1 | MTR_1g041895 | 67.547 | 795 | 205 | 8 | 1 | 749 | 1 | 788 | 0.0 | 996 |
| MS.gene072482.t1 | MTR_7g113270 | 69.934 | 755 | 202 | 10 | 1 | 749 | 1 | 736 | 0.0 | 964 |
| MS.gene072482.t1 | MTR_7g113220 | 68.568 | 754 | 210 | 11 | 1 | 749 | 1 | 732 | 0.0 | 946 |
| MS.gene072482.t1 | MTR_7g113250 | 73.672 | 433 | 112 | 2 | 14 | 445 | 2 | 433 | 0.0 | 647 |
| MS.gene072482.t1 | MTR_7g113250 | 64.198 | 162 | 54 | 2 | 588 | 749 | 434 | 591 | 9.24e-53 | 194 |
| MS.gene072482.t1 | MTR_7g112390 | 59.780 | 455 | 87 | 6 | 105 | 537 | 1 | 381 | 9.23e-161 | 483 |
| MS.gene072482.t1 | MTR_7g112390 | 59.716 | 211 | 46 | 4 | 537 | 746 | 478 | 650 | 1.13e-58 | 212 |
| MS.gene072482.t1 | MTR_7g108470 | 46.921 | 341 | 169 | 4 | 68 | 401 | 140 | 475 | 8.76e-94 | 313 |
| MS.gene072482.t1 | MTR_4g119630 | 42.330 | 352 | 160 | 5 | 19 | 332 | 37 | 383 | 3.56e-84 | 275 |
| MS.gene072482.t1 | MTR_3g049350 | 74.556 | 169 | 42 | 1 | 278 | 445 | 3 | 171 | 2.00e-75 | 245 |
| MS.gene072482.t1 | MTR_3g049350 | 56.250 | 80 | 32 | 1 | 588 | 667 | 172 | 248 | 7.54e-19 | 87.8 |
| MS.gene072482.t1 | MTR_2g436970 | 37.705 | 305 | 178 | 5 | 26 | 330 | 17 | 309 | 6.13e-60 | 209 |
| MS.gene072482.t1 | MTR_7g113290 | 68.966 | 116 | 33 | 1 | 527 | 642 | 13 | 125 | 5.47e-41 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072482.t1 | AT1G09040 | 38.041 | 531 | 244 | 13 | 70 | 572 | 138 | 611 | 4.45e-94 | 314 |
| MS.gene072482.t1 | AT1G09050 | 45.968 | 372 | 182 | 7 | 73 | 435 | 145 | 506 | 1.73e-91 | 307 |
| MS.gene072482.t1 | AT1G09050 | 45.968 | 372 | 182 | 7 | 73 | 435 | 145 | 506 | 1.73e-91 | 307 |
| MS.gene072482.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 1.28e-86 | 291 |
| MS.gene072482.t1 | AT2G47820 | 43.611 | 360 | 183 | 6 | 56 | 404 | 135 | 485 | 1.28e-86 | 291 |
| MS.gene072482.t1 | AT1G55050 | 37.066 | 518 | 273 | 11 | 73 | 580 | 128 | 602 | 7.48e-79 | 272 |
| MS.gene072482.t1 | AT1G55050 | 37.066 | 518 | 273 | 11 | 73 | 580 | 128 | 602 | 7.48e-79 | 272 |
Find 153 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAAGCCATCTGATTTC+AGG | 0.202807 | 7.3:+3654284 | MS.gene072482:CDS |
| TAACTGAATGACAGACATTT+TGG | 0.202825 | 7.3:-3654924 | None:intergenic |
| CCAAAAGTGTCGATCTCTTC+TGG | 0.207679 | 7.3:+3653882 | MS.gene072482:CDS |
| TAAAGATCATATAAAATTAA+TGG | 0.218425 | 7.3:+3654237 | MS.gene072482:CDS |
| TGCAAAGCTCTGTCTTCTTT+TGG | 0.219428 | 7.3:+3653809 | MS.gene072482:CDS |
| AAAGGGAGAAAATGTATAAT+AGG | 0.228776 | 7.3:+3653266 | MS.gene072482:CDS |
| ACCTTGTGATGTTGATTCTT+TGG | 0.236319 | 7.3:+3655239 | MS.gene072482:CDS |
| GGAATTTCTGCCTGGTATTC+AGG | 0.255405 | 7.3:-3652957 | None:intergenic |
| TGGCTTTCAACCATCTTGTT+TGG | 0.265434 | 7.3:-3654667 | None:intergenic |
| AAGAAAGACCAGATATTCTT+TGG | 0.279773 | 7.3:-3653978 | None:intergenic |
| AGCTGTTTGGCCTCGATTAC+TGG | 0.281580 | 7.3:+3653907 | MS.gene072482:CDS |
| TCGGAGTGCAGGAAATTAAA+AGG | 0.293911 | 7.3:+3653248 | MS.gene072482:CDS |
| CCAGAAGAGATCGACACTTT+TGG | 0.296338 | 7.3:-3653882 | None:intergenic |
| TGTCTCCTTGGATTTATATC+AGG | 0.302477 | 7.3:-3655270 | None:intergenic |
| TTGAATTGGAAGATGCTTCT+AGG | 0.302937 | 7.3:+3654524 | MS.gene072482:CDS |
| ATGCAGCTGTTCCTATTAAA+AGG | 0.307883 | 7.3:+3654785 | MS.gene072482:CDS |
| ACTTTACAAACTGAATTAAC+AGG | 0.318377 | 7.3:-3654322 | None:intergenic |
| TGAGAATTCTTCAGGAGGTT+TGG | 0.326165 | 7.3:+3654852 | MS.gene072482:CDS |
| AATTCAACTGACGGATATTT+CGG | 0.333248 | 7.3:-3654508 | None:intergenic |
| TATCTGGTCTTTCTTATTCC+TGG | 0.333602 | 7.3:+3653986 | MS.gene072482:CDS |
| GAAATATCCGTCAGTTGAAT+TGG | 0.333878 | 7.3:+3654510 | MS.gene072482:CDS |
| TCTTCAAGCTCAAGAATATT+CGG | 0.336030 | 7.3:-3654097 | None:intergenic |
| GAGAATTCTTCAGGAGGTTT+GGG | 0.337535 | 7.3:+3654853 | MS.gene072482:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.339278 | 7.3:+3653894 | MS.gene072482:CDS |
| AATCCTTGACAGGAAGATTT+CGG | 0.340794 | 7.3:+3653849 | MS.gene072482:CDS |
| TATAATAGGGAAGAAACTTT+TGG | 0.348101 | 7.3:+3653280 | MS.gene072482:CDS |
| GCTGCTGGTGTAAAAGATAA+AGG | 0.352913 | 7.3:+3654355 | MS.gene072482:CDS |
| AAATCACTTTCCTCTGCAAT+AGG | 0.356126 | 7.3:+3653050 | MS.gene072482:CDS |
| AGGTTTGGGATCAGATAAAC+TGG | 0.360856 | 7.3:+3654867 | MS.gene072482:CDS |
| GATACCAGTTTGGTGCATAA+AGG | 0.364116 | 7.3:+3654265 | MS.gene072482:CDS |
| TTTCTAGTGCTCTGTCTCCT+TGG | 0.375889 | 7.3:-3655282 | None:intergenic |
| CACATCACTGAGAATTCTTC+AGG | 0.383165 | 7.3:+3654844 | MS.gene072482:CDS |
| CTTCTGTGTTTGATGATAAT+CGG | 0.390702 | 7.3:+3654704 | MS.gene072482:CDS |
| TGTTACCTCCAAAGAATATC+TGG | 0.396531 | 7.3:+3653970 | MS.gene072482:CDS |
| TTTATTGTAGGTAAAAGATC+GGG | 0.411701 | 7.3:-3654218 | None:intergenic |
| AAGGGAGAAAATGTATAATA+GGG | 0.412435 | 7.3:+3653267 | MS.gene072482:CDS |
| AAAGATCATATAAAATTAAT+GGG | 0.413384 | 7.3:+3654238 | MS.gene072482:CDS |
| AATGGGTATTGATACCAGTT+TGG | 0.424546 | 7.3:+3654255 | MS.gene072482:CDS |
| CTTTCCTTTATGCACCAAAC+TGG | 0.426656 | 7.3:-3654269 | None:intergenic |
| TTCAATCAGAGAGTAATATC+TGG | 0.436616 | 7.3:+3654751 | MS.gene072482:CDS |
| CAAAAGTGTCGATCTCTTCT+GGG | 0.438413 | 7.3:+3653883 | MS.gene072482:CDS |
| CGTCGACATTGTTCAGATCA+TGG | 0.443605 | 7.3:+3655444 | MS.gene072482:CDS |
| ACAGATTTCGATGGAACCTT+GGG | 0.459053 | 7.3:-3655105 | None:intergenic |
| CTCGAAAACTTCTCAACGCC+AGG | 0.461495 | 7.3:-3654004 | None:intergenic |
| AGGAAAGCCATCTGATTTCA+GGG | 0.463547 | 7.3:+3654285 | MS.gene072482:CDS |
| ATCGTAGATGGTCGGAGTGC+AGG | 0.464883 | 7.3:+3653237 | MS.gene072482:CDS |
| AACTGATGATTCACGAAGAA+TGG | 0.471427 | 7.3:+3654588 | MS.gene072482:CDS |
| TACAGATTTCGATGGAACCT+TGG | 0.472631 | 7.3:-3655106 | None:intergenic |
| AGGCCATGCTCACCTTTCTC+TGG | 0.475404 | 7.3:-3655153 | None:intergenic |
| GCAGAATTCGACAAAGTTGA+CGG | 0.478357 | 7.3:+3654432 | MS.gene072482:CDS |
| GTTCCACATCAAGCCTAGTA+AGG | 0.483315 | 7.3:-3653748 | None:intergenic |
| ATGTCTAGCATCAGCCGCTC+AGG | 0.485261 | 7.3:+3655191 | MS.gene072482:CDS |
| GATATAATTCAATCCTTGAC+AGG | 0.488303 | 7.3:+3653839 | MS.gene072482:CDS |
| AAAGTTGAGGCAGGTGCTGC+TGG | 0.488918 | 7.3:+3654340 | MS.gene072482:CDS |
| AAAGATTCATAGAGAACAAA+CGG | 0.491729 | 7.3:+3653162 | MS.gene072482:CDS |
| CTTGTGGAAGCAGTAAGTAT+TGG | 0.492851 | 7.3:+3653710 | MS.gene072482:CDS |
| AGGAGAAGGGAGACCTTACT+AGG | 0.496067 | 7.3:+3653735 | MS.gene072482:CDS |
| TCAGTTTGTAAAGTTGAGGC+AGG | 0.497900 | 7.3:+3654331 | MS.gene072482:CDS |
| CTTTATTGTAGGTAAAAGAT+CGG | 0.498545 | 7.3:-3654219 | None:intergenic |
| GTAACATAGCCTTGATACAT+TGG | 0.499915 | 7.3:-3653953 | None:intergenic |
| ATCATTGACAGTTAGAGCAT+TGG | 0.500083 | 7.3:+3655308 | MS.gene072482:CDS |
| ATGGTGACGGCGCCAGAGAA+AGG | 0.500312 | 7.3:+3655141 | MS.gene072482:CDS |
| AGTAAGTATTGGCAAGGAGA+AGG | 0.505358 | 7.3:+3653721 | MS.gene072482:CDS |
| GCCCCAGGACTGTTCTTCCT+AGG | 0.508970 | 7.3:-3653770 | None:intergenic |
| ATACTCCATGTGACTGGGAT+GGG | 0.509555 | 7.3:-3653077 | None:intergenic |
| TGGAACCTTGGGTCTGTTGA+GGG | 0.510322 | 7.3:-3655094 | None:intergenic |
| GAACCTAGGAAGAACAGTCC+TGG | 0.510751 | 7.3:+3653767 | MS.gene072482:CDS |
| CTGCTGGTGTAAAAGATAAA+GGG | 0.519980 | 7.3:+3654356 | MS.gene072482:CDS |
| CAATGAGGAAGAGCCAGAAA+AGG | 0.522275 | 7.3:+3654144 | MS.gene072482:CDS |
| ATGGAACCTTGGGTCTGTTG+AGG | 0.523435 | 7.3:-3655095 | None:intergenic |
| TCTTATATGAAGTCTACTGT+TGG | 0.528919 | 7.3:+3653677 | MS.gene072482:CDS |
| TCTGATTGCTCAATCAAAGA+AGG | 0.529069 | 7.3:-3652978 | None:intergenic |
| TCGAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.3:+3654022 | MS.gene072482:CDS |
| TTGATATTTACAGATTTCGA+TGG | 0.530008 | 7.3:-3655114 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.530913 | 7.3:+3653225 | MS.gene072482:CDS |
| ATCATAATCATTCTGCTCAA+AGG | 0.531350 | 7.3:-3652880 | None:intergenic |
| TCAGCAATACTCCATGTGAC+TGG | 0.532987 | 7.3:-3653083 | None:intergenic |
| ATGAAGTCTACTGTTGGACT+TGG | 0.533142 | 7.3:+3653683 | MS.gene072482:CDS |
| TCGAATCGGTCCTGAATACC+AGG | 0.536009 | 7.3:+3652947 | MS.gene072482:CDS |
| GACACAAATAGCTTTGTACT+AGG | 0.536661 | 7.3:+3653104 | MS.gene072482:CDS |
| GACATGAATCATTTGCCTCT+AGG | 0.537768 | 7.3:-3655173 | None:intergenic |
| AGCCGCTCAGGAAGTAGTTG+AGG | 0.539080 | 7.3:+3655203 | MS.gene072482:CDS |
| TGTTGGACTTGGCGTTCTTG+TGG | 0.539550 | 7.3:+3653694 | MS.gene072482:CDS |
| GTTTGTGCTGAAAATGCCCC+AGG | 0.539944 | 7.3:-3653785 | None:intergenic |
| AACCTAGGAAGAACAGTCCT+GGG | 0.541835 | 7.3:+3653768 | MS.gene072482:CDS |
| TTCAAATCCCTGAAATCAGA+TGG | 0.542406 | 7.3:-3654292 | None:intergenic |
| TTTAATAGGAACAGCTGCAT+GGG | 0.543232 | 7.3:-3654782 | None:intergenic |
| CTTGAATTCAGTCCTCGAAT+CGG | 0.544267 | 7.3:+3652933 | MS.gene072482:CDS |
| TCATAGAGAACAAACGGATG+GGG | 0.548246 | 7.3:+3653168 | MS.gene072482:CDS |
| AATGAGGAAGAGCCAGAAAA+GGG | 0.549935 | 7.3:+3654145 | MS.gene072482:CDS |
| GTCGACATTGTTCAGATCAT+GGG | 0.552249 | 7.3:+3655445 | MS.gene072482:CDS |
| GTAAGTATTGGCAAGGAGAA+GGG | 0.554132 | 7.3:+3653722 | MS.gene072482:CDS |
| AAAGACCAGATATTCTTTGG+AGG | 0.555308 | 7.3:-3653975 | None:intergenic |
| CGGAGTGCAGGAAATTAAAA+GGG | 0.556354 | 7.3:+3653249 | MS.gene072482:CDS |
| CATTTCTCAACTTGAACGCA+AGG | 0.556373 | 7.3:-3655060 | None:intergenic |
| CAGCCGAAATCTTCCTGTCA+AGG | 0.558912 | 7.3:-3653852 | None:intergenic |
| GGGGCTTGAGGTAACATTGA+CGG | 0.564168 | 7.3:-3654198 | None:intergenic |
| TCTGAGCAACCAATGTATCA+AGG | 0.564748 | 7.3:+3653944 | MS.gene072482:CDS |
| CTCGATTACTGGCAAGAGGT+TGG | 0.566010 | 7.3:+3653918 | MS.gene072482:CDS |
| AGACCAGCTTTCACTTCGAA+CGG | 0.567796 | 7.3:+3652998 | MS.gene072482:CDS |
| GATCCGTTCGAAGTGAAAGC+TGG | 0.567844 | 7.3:-3653001 | None:intergenic |
| TTCATAGAGAACAAACGGAT+GGG | 0.571891 | 7.3:+3653167 | MS.gene072482:CDS |
| TGGTATTCAGGACCGATTCG+AGG | 0.572296 | 7.3:-3652945 | None:intergenic |
| AATCTTCTGAAAGAAAGTAA+AGG | 0.572900 | 7.3:+3654556 | MS.gene072482:CDS |
| AAGGAATGTAAAACATAGCA+AGG | 0.573770 | 7.3:+3654390 | MS.gene072482:CDS |
| TGGCCTCGATTACTGGCAAG+AGG | 0.576092 | 7.3:+3653914 | MS.gene072482:CDS |
| TCAAAGAAGGAATTTCTGCC+TGG | 0.578058 | 7.3:-3652965 | None:intergenic |
| GAATATTCTTGAGCTTGAAG+AGG | 0.578780 | 7.3:+3654099 | MS.gene072482:CDS |
| AGGTAAAAGATCGGGGCTTG+AGG | 0.579822 | 7.3:-3654210 | None:intergenic |
| AATACTCCATGTGACTGGGA+TGG | 0.580858 | 7.3:-3653078 | None:intergenic |
| GAGATTAACTGCTTGTGTCA+AGG | 0.581897 | 7.3:+3654810 | MS.gene072482:CDS |
| ATCTGTAAATATCAAAACAA+TGG | 0.583516 | 7.3:+3655122 | MS.gene072482:CDS |
| CTAGGCTTGATGTGGAACCT+AGG | 0.584890 | 7.3:+3653753 | MS.gene072482:CDS |
| TGATAGTGATCCAAACAAGA+TGG | 0.588516 | 7.3:+3654657 | MS.gene072482:CDS |
| TGCAGCAAGGTTCATACAAG+AGG | 0.588688 | 7.3:+3655408 | MS.gene072482:intron |
| TAATTCAGTTTGTAAAGTTG+AGG | 0.590421 | 7.3:+3654327 | MS.gene072482:CDS |
| GAAAGGTGAGCATGGCCTAG+AGG | 0.593104 | 7.3:+3655158 | MS.gene072482:CDS |
| TGAACATCTTCTGAATCAGT+AGG | 0.595610 | 7.3:-3653023 | None:intergenic |
| GATACCAATGGACTTTCCGA+AGG | 0.596842 | 7.3:+3654460 | MS.gene072482:CDS |
| CTGAAGAATTCTCAGTGATG+TGG | 0.597073 | 7.3:-3654843 | None:intergenic |
| ATTCATAGAGAACAAACGGA+TGG | 0.602448 | 7.3:+3653166 | MS.gene072482:CDS |
| ACATCACAAGGTGTTCTCAA+AGG | 0.603032 | 7.3:-3655228 | None:intergenic |
| TTGACGGTCATTGATACCAA+TGG | 0.605853 | 7.3:+3654448 | MS.gene072482:CDS |
| GCGCCAGAGAAAGGTGAGCA+TGG | 0.606459 | 7.3:+3655150 | MS.gene072482:CDS |
| TGATGATTCACGAAGAATGG+TGG | 0.607579 | 7.3:+3654591 | MS.gene072482:CDS |
| GCATCTTCCAATTCAACTGA+CGG | 0.608811 | 7.3:-3654517 | None:intergenic |
| AAATATCAAAACAATGGTGA+CGG | 0.614111 | 7.3:+3655128 | MS.gene072482:CDS |
| CAGCAATACTCCATGTGACT+GGG | 0.616407 | 7.3:-3653082 | None:intergenic |
| ATAAAGGGCAAAGTTATACA+AGG | 0.618599 | 7.3:+3654371 | MS.gene072482:CDS |
| GTTTGCCCATCCCAGTCACA+TGG | 0.618676 | 7.3:+3653072 | MS.gene072482:CDS |
| TTATTGTAGGTAAAAGATCG+GGG | 0.620178 | 7.3:-3654217 | None:intergenic |
| CAACCTCTTGCCAGTAATCG+AGG | 0.623252 | 7.3:-3653917 | None:intergenic |
| TTGATGATAATCGGATGAAG+AGG | 0.623283 | 7.3:+3654713 | MS.gene072482:CDS |
| ATCACTGAGAATTCTTCAGG+AGG | 0.625006 | 7.3:+3654847 | MS.gene072482:CDS |
| AACAGCCTGATATAAATCCA+AGG | 0.626073 | 7.3:+3655265 | MS.gene072482:CDS |
| GTTTCTAAATCATATGTCGA+TGG | 0.626151 | 7.3:+3653629 | MS.gene072482:CDS |
| AGACCTTACTAGGCTTGATG+TGG | 0.628161 | 7.3:+3653745 | MS.gene072482:CDS |
| TGAGATTTGTCAGAGACATG+AGG | 0.628677 | 7.3:-3653341 | None:intergenic |
| TCCAAAGAATCAACATCACA+AGG | 0.630329 | 7.3:-3655240 | None:intergenic |
| CATAGAGAACAAACGGATGG+GGG | 0.631391 | 7.3:+3653169 | MS.gene072482:CDS |
| AAGGATTGAATTATATCACT+AGG | 0.634298 | 7.3:-3653833 | None:intergenic |
| GGAAGCAGTAAGTATTGGCA+AGG | 0.637899 | 7.3:+3653715 | MS.gene072482:CDS |
| TAAAGTTCATAGCTGCAATG+AGG | 0.642923 | 7.3:+3654129 | MS.gene072482:CDS |
| TGATGGATATCGTAGATGGT+CGG | 0.645738 | 7.3:+3653229 | MS.gene072482:CDS |
| GAAGCTAAGATGCTGATATG+TGG | 0.648506 | 7.3:+3654613 | MS.gene072482:CDS |
| CAGCTGTTCCTATTAAAAGG+AGG | 0.650589 | 7.3:+3654788 | MS.gene072482:CDS |
| TTCTTTAGCAGACAGAAGTG+TGG | 0.672598 | 7.3:+3654984 | MS.gene072482:CDS |
| TTACACCCTCAACAGACCCA+AGG | 0.679268 | 7.3:+3655089 | MS.gene072482:CDS |
| GATGGGCAAACCTATTGCAG+AGG | 0.681836 | 7.3:-3653060 | None:intergenic |
| TAGTGATGTCTTGAACAAAG+TGG | 0.700987 | 7.3:+3654066 | MS.gene072482:CDS |
| GGTTTGGGATCAGATAAACT+GGG | 0.714357 | 7.3:+3654868 | MS.gene072482:CDS |
| ACCTAGGAAGAACAGTCCTG+GGG | 0.724587 | 7.3:+3653769 | MS.gene072482:CDS |
| CTCCTCAACTACTTCCTGAG+CGG | 0.726279 | 7.3:-3655205 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATCATATAAAATTAAT+GGG | + | chr7.3:3654238-3654257 | MS.gene072482:CDS | 10.0% |
| !! | TAAAGATCATATAAAATTAA+TGG | + | chr7.3:3654237-3654256 | MS.gene072482:CDS | 10.0% |
| !!! | TTATTTAAAAAAAAAGGTAC+TGG | - | chr7.3:3653544-3653563 | None:intergenic | 15.0% |
| !!! | TTTTATATGATCTTTATTGT+AGG | - | chr7.3:3654233-3654252 | None:intergenic | 15.0% |
| !! | ATCTGTAAATATCAAAACAA+TGG | + | chr7.3:3655122-3655141 | MS.gene072482:CDS | 20.0% |
| !!! | GAAATACTTACATTTTACTA+TGG | + | chr7.3:3653191-3653210 | MS.gene072482:CDS | 20.0% |
| !!! | TACTAGGTTTGTTTATTTTT+GGG | + | chr7.3:3653120-3653139 | MS.gene072482:CDS | 20.0% |
| ! | AAAGATTCATAGAGAACAAA+CGG | + | chr7.3:3653162-3653181 | MS.gene072482:CDS | 25.0% |
| ! | AAAGGGAGAAAATGTATAAT+AGG | + | chr7.3:3653266-3653285 | MS.gene072482:CDS | 25.0% |
| ! | AAATATCAAAACAATGGTGA+CGG | + | chr7.3:3655128-3655147 | MS.gene072482:CDS | 25.0% |
| ! | AAGGATTGAATTATATCACT+AGG | - | chr7.3:3653836-3653855 | None:intergenic | 25.0% |
| ! | AAGGGAGAAAATGTATAATA+GGG | + | chr7.3:3653267-3653286 | MS.gene072482:CDS | 25.0% |
| ! | ACTTTACAAACTGAATTAAC+AGG | - | chr7.3:3654325-3654344 | None:intergenic | 25.0% |
| ! | CTTTATTGTAGGTAAAAGAT+CGG | - | chr7.3:3654222-3654241 | None:intergenic | 25.0% |
| ! | CTTTGCTTATATTTATACTC+AGG | + | chr7.3:3653607-3653626 | MS.gene072482:intron | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | - | chr7.3:3653605-3653624 | None:intergenic | 25.0% |
| ! | TAATTCAGTTTGTAAAGTTG+AGG | + | chr7.3:3654327-3654346 | MS.gene072482:CDS | 25.0% |
| ! | TTGATATTTACAGATTTCGA+TGG | - | chr7.3:3655117-3655136 | None:intergenic | 25.0% |
| ! | TTTATTGTAGGTAAAAGATC+GGG | - | chr7.3:3654221-3654240 | None:intergenic | 25.0% |
| !! | AATCTTCTGAAAGAAAGTAA+AGG | + | chr7.3:3654556-3654575 | MS.gene072482:CDS | 25.0% |
| !! | ATCTCAAGATACATTTTTAC+AGG | + | chr7.3:3653358-3653377 | MS.gene072482:CDS | 25.0% |
| !! | TATAATAGGGAAGAAACTTT+TGG | + | chr7.3:3653280-3653299 | MS.gene072482:CDS | 25.0% |
| !! | TTTCTTCAATAGTTTTCCTT+CGG | - | chr7.3:3654479-3654498 | None:intergenic | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+TGG | + | chr7.3:3653119-3653138 | MS.gene072482:CDS | 25.0% |
| !!! | TAAAAAAAAAGGTACTGGTA+TGG | - | chr7.3:3653539-3653558 | None:intergenic | 25.0% |
| !!! | TAATGAAAAAAGCATTCTCA+AGG | + | chr7.3:3655014-3655033 | MS.gene072482:CDS | 25.0% |
| AAGAAAGACCAGATATTCTT+TGG | - | chr7.3:3653981-3654000 | None:intergenic | 30.0% | |
| AAGGAATGTAAAACATAGCA+AGG | + | chr7.3:3654390-3654409 | MS.gene072482:CDS | 30.0% | |
| ATAAAGGGCAAAGTTATACA+AGG | + | chr7.3:3654371-3654390 | MS.gene072482:CDS | 30.0% | |
| ATCATAATCATTCTGCTCAA+AGG | - | chr7.3:3652883-3652902 | None:intergenic | 30.0% | |
| ATGTGCAAAGTAGACAAAAA+AGG | + | chr7.3:3655355-3655374 | MS.gene072482:intron | 30.0% | |
| GATATAATTCAATCCTTGAC+AGG | + | chr7.3:3653839-3653858 | MS.gene072482:CDS | 30.0% | |
| GTTACAATGGTAATTGCAAT+GGG | + | chr7.3:3653497-3653516 | MS.gene072482:intron | 30.0% | |
| GTTTCTAAATCATATGTCGA+TGG | + | chr7.3:3653629-3653648 | MS.gene072482:CDS | 30.0% | |
| TCTTATATGAAGTCTACTGT+TGG | + | chr7.3:3653677-3653696 | MS.gene072482:CDS | 30.0% | |
| TCTTCAAGCTCAAGAATATT+CGG | - | chr7.3:3654100-3654119 | None:intergenic | 30.0% | |
| TGTTACAATGGTAATTGCAA+TGG | + | chr7.3:3653496-3653515 | MS.gene072482:intron | 30.0% | |
| TTATTGTAGGTAAAAGATCG+GGG | - | chr7.3:3654220-3654239 | None:intergenic | 30.0% | |
| TTCAATCAGAGAGTAATATC+TGG | + | chr7.3:3654751-3654770 | MS.gene072482:CDS | 30.0% | |
| ! | AATTCAACTGACGGATATTT+CGG | - | chr7.3:3654511-3654530 | None:intergenic | 30.0% |
| ! | CTTCTGTGTTTGATGATAAT+CGG | + | chr7.3:3654704-3654723 | MS.gene072482:CDS | 30.0% |
| ! | GTTAATCTCCTCCTTTTAAT+AGG | - | chr7.3:3654799-3654818 | None:intergenic | 30.0% |
| ! | TAACTGAATGACAGACATTT+TGG | - | chr7.3:3654927-3654946 | None:intergenic | 30.0% |
| !!! | CAGAAGTATGTTGATTTTTC+TGG | - | chr7.3:3654690-3654709 | None:intergenic | 30.0% |
| AAAGACCAGATATTCTTTGG+AGG | - | chr7.3:3653978-3653997 | None:intergenic | 35.0% | |
| AAAGTGAGGAATGAAGCAAA+TGG | - | chr7.3:3653591-3653610 | None:intergenic | 35.0% | |
| AAATCACTTTCCTCTGCAAT+AGG | + | chr7.3:3653050-3653069 | MS.gene072482:CDS | 35.0% | |
| AACAGCCTGATATAAATCCA+AGG | + | chr7.3:3655265-3655284 | MS.gene072482:CDS | 35.0% | |
| AACTGATGATTCACGAAGAA+TGG | + | chr7.3:3654588-3654607 | MS.gene072482:CDS | 35.0% | |
| AATCCTTGACAGGAAGATTT+CGG | + | chr7.3:3653849-3653868 | MS.gene072482:CDS | 35.0% | |
| ATCATTGACAGTTAGAGCAT+TGG | + | chr7.3:3655308-3655327 | MS.gene072482:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+AGG | + | chr7.3:3654785-3654804 | MS.gene072482:CDS | 35.0% | |
| ATTCATAGAGAACAAACGGA+TGG | + | chr7.3:3653166-3653185 | MS.gene072482:CDS | 35.0% | |
| CTGCTGGTGTAAAAGATAAA+GGG | + | chr7.3:3654356-3654375 | MS.gene072482:CDS | 35.0% | |
| GAAATATCCGTCAGTTGAAT+TGG | + | chr7.3:3654510-3654529 | MS.gene072482:CDS | 35.0% | |
| GAATATTCTTGAGCTTGAAG+AGG | + | chr7.3:3654099-3654118 | MS.gene072482:CDS | 35.0% | |
| GCTATGTGCATATGTTACAA+TGG | + | chr7.3:3653484-3653503 | MS.gene072482:intron | 35.0% | |
| TAAAGTTCATAGCTGCAATG+AGG | + | chr7.3:3654129-3654148 | MS.gene072482:CDS | 35.0% | |
| TAGTGATGTCTTGAACAAAG+TGG | + | chr7.3:3654066-3654085 | MS.gene072482:CDS | 35.0% | |
| TCCAAAGAATCAACATCACA+AGG | - | chr7.3:3655243-3655262 | None:intergenic | 35.0% | |
| TCTGATTGCTCAATCAAAGA+AGG | - | chr7.3:3652981-3653000 | None:intergenic | 35.0% | |
| TGAACATCTTCTGAATCAGT+AGG | - | chr7.3:3653026-3653045 | None:intergenic | 35.0% | |
| TGCAAAACCTTCACAAGTTA+TGG | + | chr7.3:3653435-3653454 | MS.gene072482:intron | 35.0% | |
| TGCATTGTAACATCAAACGA+AGG | - | chr7.3:3653419-3653438 | None:intergenic | 35.0% | |
| TGTCTCCTTGGATTTATATC+AGG | - | chr7.3:3655273-3655292 | None:intergenic | 35.0% | |
| TGTTACCTCCAAAGAATATC+TGG | + | chr7.3:3653970-3653989 | MS.gene072482:CDS | 35.0% | |
| TTCAAATCCCTGAAATCAGA+TGG | - | chr7.3:3654295-3654314 | None:intergenic | 35.0% | |
| TTCATAGAGAACAAACGGAT+GGG | + | chr7.3:3653167-3653186 | MS.gene072482:CDS | 35.0% | |
| TTGAATTGGAAGATGCTTCT+AGG | + | chr7.3:3654524-3654543 | MS.gene072482:CDS | 35.0% | |
| TTTAATAGGAACAGCTGCAT+GGG | - | chr7.3:3654785-3654804 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | + | chr7.3:3653225-3653244 | MS.gene072482:CDS | 35.0% |
| ! | GGAAAGTTTTACGAAACTGA+TGG | + | chr7.3:3653212-3653231 | MS.gene072482:CDS | 35.0% |
| ! | GTAACATAGCCTTGATACAT+TGG | - | chr7.3:3653956-3653975 | None:intergenic | 35.0% |
| ! | TATCTGGTCTTTCTTATTCC+TGG | + | chr7.3:3653986-3654005 | MS.gene072482:CDS | 35.0% |
| ! | TCTTCATTTGATCCCTTTTC+TGG | - | chr7.3:3654160-3654179 | None:intergenic | 35.0% |
| ! | TGATAGTGATCCAAACAAGA+TGG | + | chr7.3:3654657-3654676 | MS.gene072482:CDS | 35.0% |
| ! | TTGATGATAATCGGATGAAG+AGG | + | chr7.3:3654713-3654732 | MS.gene072482:CDS | 35.0% |
| ! | TTTTAATAGGAACAGCTGCA+TGG | - | chr7.3:3654786-3654805 | None:intergenic | 35.0% |
| !! | AATGGGTATTGATACCAGTT+TGG | + | chr7.3:3654255-3654274 | MS.gene072482:CDS | 35.0% |
| !! | ACCTTGTGATGTTGATTCTT+TGG | + | chr7.3:3655239-3655258 | MS.gene072482:CDS | 35.0% |
| !! | GACACAAATAGCTTTGTACT+AGG | + | chr7.3:3653104-3653123 | MS.gene072482:CDS | 35.0% |
| !! | TGAATGACAGACATTTTGGT+TGG | - | chr7.3:3654923-3654942 | None:intergenic | 35.0% |
| AAGGAAAGCCATCTGATTTC+AGG | + | chr7.3:3654284-3654303 | MS.gene072482:CDS | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+GGG | + | chr7.3:3654145-3654164 | MS.gene072482:CDS | 40.0% | |
| ACAGATTTCGATGGAACCTT+GGG | - | chr7.3:3655108-3655127 | None:intergenic | 40.0% | |
| AGGAAAGCCATCTGATTTCA+GGG | + | chr7.3:3654285-3654304 | MS.gene072482:CDS | 40.0% | |
| ATCACTGAGAATTCTTCAGG+AGG | + | chr7.3:3654847-3654866 | MS.gene072482:CDS | 40.0% | |
| ATGAAGTCTACTGTTGGACT+TGG | + | chr7.3:3653683-3653702 | MS.gene072482:CDS | 40.0% | |
| CACATCACTGAGAATTCTTC+AGG | + | chr7.3:3654844-3654863 | MS.gene072482:CDS | 40.0% | |
| CAGCTGTTCCTATTAAAAGG+AGG | + | chr7.3:3654788-3654807 | MS.gene072482:CDS | 40.0% | |
| CATTTCTCAACTTGAACGCA+AGG | - | chr7.3:3655063-3655082 | None:intergenic | 40.0% | |
| CGGAGTGCAGGAAATTAAAA+GGG | + | chr7.3:3653249-3653268 | MS.gene072482:CDS | 40.0% | |
| CTGAAGAATTCTCAGTGATG+TGG | - | chr7.3:3654846-3654865 | None:intergenic | 40.0% | |
| CTTGAATTCAGTCCTCGAAT+CGG | + | chr7.3:3652933-3652952 | MS.gene072482:CDS | 40.0% | |
| CTTGTGGAAGCAGTAAGTAT+TGG | + | chr7.3:3653710-3653729 | MS.gene072482:CDS | 40.0% | |
| CTTTCCTTTATGCACCAAAC+TGG | - | chr7.3:3654272-3654291 | None:intergenic | 40.0% | |
| GAAGCTAAGATGCTGATATG+TGG | + | chr7.3:3654613-3654632 | MS.gene072482:CDS | 40.0% | |
| GACATGAATCATTTGCCTCT+AGG | - | chr7.3:3655176-3655195 | None:intergenic | 40.0% | |
| GAGAATTCTTCAGGAGGTTT+GGG | + | chr7.3:3654853-3654872 | MS.gene072482:CDS | 40.0% | |
| GAGATTAACTGCTTGTGTCA+AGG | + | chr7.3:3654810-3654829 | MS.gene072482:CDS | 40.0% | |
| GCAGAATTCGACAAAGTTGA+CGG | + | chr7.3:3654432-3654451 | MS.gene072482:CDS | 40.0% | |
| GCATCTTCCAATTCAACTGA+CGG | - | chr7.3:3654520-3654539 | None:intergenic | 40.0% | |
| GCTGCTGGTGTAAAAGATAA+AGG | + | chr7.3:3654355-3654374 | MS.gene072482:CDS | 40.0% | |
| GTCGACATTGTTCAGATCAT+GGG | + | chr7.3:3655445-3655464 | MS.gene072482:CDS | 40.0% | |
| TACAGATTTCGATGGAACCT+TGG | - | chr7.3:3655109-3655128 | None:intergenic | 40.0% | |
| TCAAAGAAGGAATTTCTGCC+TGG | - | chr7.3:3652968-3652987 | None:intergenic | 40.0% | |
| TCAGTTTGTAAAGTTGAGGC+AGG | + | chr7.3:3654331-3654350 | MS.gene072482:CDS | 40.0% | |
| TCATAGAGAACAAACGGATG+GGG | + | chr7.3:3653168-3653187 | MS.gene072482:CDS | 40.0% | |
| TCGAGGAGAAAACTTGTGAA+AGG | + | chr7.3:3654022-3654041 | MS.gene072482:CDS | 40.0% | |
| TCGGAGTGCAGGAAATTAAA+AGG | + | chr7.3:3653248-3653267 | MS.gene072482:CDS | 40.0% | |
| TCTGAGCAACCAATGTATCA+AGG | + | chr7.3:3653944-3653963 | MS.gene072482:CDS | 40.0% | |
| TGAGAATTCTTCAGGAGGTT+TGG | + | chr7.3:3654852-3654871 | MS.gene072482:CDS | 40.0% | |
| TGAGATTTGTCAGAGACATG+AGG | - | chr7.3:3653344-3653363 | None:intergenic | 40.0% | |
| TGATGATTCACGAAGAATGG+TGG | + | chr7.3:3654591-3654610 | MS.gene072482:CDS | 40.0% | |
| TGGCTTTCAACCATCTTGTT+TGG | - | chr7.3:3654670-3654689 | None:intergenic | 40.0% | |
| TTCTTTAGCAGACAGAAGTG+TGG | + | chr7.3:3654984-3655003 | MS.gene072482:CDS | 40.0% | |
| TTGACGGTCATTGATACCAA+TGG | + | chr7.3:3654448-3654467 | MS.gene072482:CDS | 40.0% | |
| ! | ACATCACAAGGTGTTCTCAA+AGG | - | chr7.3:3655231-3655250 | None:intergenic | 40.0% |
| ! | AGATGCTCCATAACTTGTGA+AGG | - | chr7.3:3653445-3653464 | None:intergenic | 40.0% |
| ! | AGGTTTGGGATCAGATAAAC+TGG | + | chr7.3:3654867-3654886 | MS.gene072482:CDS | 40.0% |
| ! | ATAGGGAAGAAACTTTTGGC+TGG | + | chr7.3:3653284-3653303 | MS.gene072482:CDS | 40.0% |
| ! | GGTTTGGGATCAGATAAACT+GGG | + | chr7.3:3654868-3654887 | MS.gene072482:CDS | 40.0% |
| ! | TGATGGATATCGTAGATGGT+CGG | + | chr7.3:3653229-3653248 | MS.gene072482:CDS | 40.0% |
| ! | TGCAAAGCTCTGTCTTCTTT+TGG | + | chr7.3:3653809-3653828 | MS.gene072482:CDS | 40.0% |
| ! | TTTTCCTTCGGAAAGTCCAT+TGG | - | chr7.3:3654467-3654486 | None:intergenic | 40.0% |
| !! | AGTAAGTATTGGCAAGGAGA+AGG | + | chr7.3:3653721-3653740 | MS.gene072482:CDS | 40.0% |
| !! | CAAAAGTGTCGATCTCTTCT+GGG | + | chr7.3:3653883-3653902 | MS.gene072482:CDS | 40.0% |
| !! | GATACCAGTTTGGTGCATAA+AGG | + | chr7.3:3654265-3654284 | MS.gene072482:CDS | 40.0% |
| !! | GTAAGTATTGGCAAGGAGAA+GGG | + | chr7.3:3653722-3653741 | MS.gene072482:CDS | 40.0% |
| AACCTAGGAAGAACAGTCCT+GGG | + | chr7.3:3653768-3653787 | MS.gene072482:CDS | 45.0% | |
| AATACTCCATGTGACTGGGA+TGG | - | chr7.3:3653081-3653100 | None:intergenic | 45.0% | |
| ACCTTGCTGCAAGGATTGAA+AGG | - | chr7.3:3655399-3655418 | None:intergenic | 45.0% | |
| AGACCAGCTTTCACTTCGAA+CGG | + | chr7.3:3652998-3653017 | MS.gene072482:CDS | 45.0% | |
| AGACCTTACTAGGCTTGATG+TGG | + | chr7.3:3653745-3653764 | MS.gene072482:CDS | 45.0% | |
| ATACTCCATGTGACTGGGAT+GGG | - | chr7.3:3653080-3653099 | None:intergenic | 45.0% | |
| CAATGAGGAAGAGCCAGAAA+AGG | + | chr7.3:3654144-3654163 | MS.gene072482:CDS | 45.0% | |
| CAGCAATACTCCATGTGACT+GGG | - | chr7.3:3653085-3653104 | None:intergenic | 45.0% | |
| CATAGAGAACAAACGGATGG+GGG | + | chr7.3:3653169-3653188 | MS.gene072482:CDS | 45.0% | |
| CGTCGACATTGTTCAGATCA+TGG | + | chr7.3:3655444-3655463 | MS.gene072482:CDS | 45.0% | |
| CTTGTATGAACCTTGCTGCA+AGG | - | chr7.3:3655408-3655427 | None:intergenic | 45.0% | |
| GGAATTTCTGCCTGGTATTC+AGG | - | chr7.3:3652960-3652979 | None:intergenic | 45.0% | |
| GTTCCACATCAAGCCTAGTA+AGG | - | chr7.3:3653751-3653770 | None:intergenic | 45.0% | |
| TCAGCAATACTCCATGTGAC+TGG | - | chr7.3:3653086-3653105 | None:intergenic | 45.0% | |
| TCCTTTCAATCCTTGCAGCA+AGG | + | chr7.3:3655395-3655414 | MS.gene072482:intron | 45.0% | |
| TGCAGCAAGGTTCATACAAG+AGG | + | chr7.3:3655408-3655427 | MS.gene072482:intron | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | + | chr7.3:3653894-3653913 | MS.gene072482:CDS | 45.0% |
| ! | CCAGAAGAGATCGACACTTT+TGG | - | chr7.3:3653885-3653904 | None:intergenic | 45.0% |
| ! | GATACCAATGGACTTTCCGA+AGG | + | chr7.3:3654460-3654479 | MS.gene072482:CDS | 45.0% |
| ! | TTTCTAGTGCTCTGTCTCCT+TGG | - | chr7.3:3655285-3655304 | None:intergenic | 45.0% |
| !! | CCAAAAGTGTCGATCTCTTC+TGG | + | chr7.3:3653882-3653901 | MS.gene072482:CDS | 45.0% |
| !! | GGAAGCAGTAAGTATTGGCA+AGG | + | chr7.3:3653715-3653734 | MS.gene072482:CDS | 45.0% |
| !! | AAAAAGTTATTTAAAAAAAA+AGG | - | chr7.3:3653550-3653569 | None:intergenic | 5.0% |
| ACCTAGGAAGAACAGTCCTG+GGG | + | chr7.3:3653769-3653788 | MS.gene072482:CDS | 50.0% | |
| AGCTGTTTGGCCTCGATTAC+TGG | + | chr7.3:3653907-3653926 | MS.gene072482:CDS | 50.0% | |
| AGGAGAAGGGAGACCTTACT+AGG | + | chr7.3:3653735-3653754 | MS.gene072482:CDS | 50.0% | |
| AGGTAAAAGATCGGGGCTTG+AGG | - | chr7.3:3654213-3654232 | None:intergenic | 50.0% | |
| ATGGAACCTTGGGTCTGTTG+AGG | - | chr7.3:3655098-3655117 | None:intergenic | 50.0% | |
| CAACCTCTTGCCAGTAATCG+AGG | - | chr7.3:3653920-3653939 | None:intergenic | 50.0% | |
| CAATGGGAACCTGTGCTCTA+TGG | + | chr7.3:3653513-3653532 | MS.gene072482:intron | 50.0% | |
| CAGCCGAAATCTTCCTGTCA+AGG | - | chr7.3:3653855-3653874 | None:intergenic | 50.0% | |
| CTAGGCTTGATGTGGAACCT+AGG | + | chr7.3:3653753-3653772 | MS.gene072482:CDS | 50.0% | |
| CTCCTCAACTACTTCCTGAG+CGG | - | chr7.3:3655208-3655227 | None:intergenic | 50.0% | |
| CTCGAAAACTTCTCAACGCC+AGG | - | chr7.3:3654007-3654026 | None:intergenic | 50.0% | |
| CTCGATTACTGGCAAGAGGT+TGG | + | chr7.3:3653918-3653937 | MS.gene072482:CDS | 50.0% | |
| GAACCTAGGAAGAACAGTCC+TGG | + | chr7.3:3653767-3653786 | MS.gene072482:CDS | 50.0% | |
| GATCCGTTCGAAGTGAAAGC+TGG | - | chr7.3:3653004-3653023 | None:intergenic | 50.0% | |
| GATGGGCAAACCTATTGCAG+AGG | - | chr7.3:3653063-3653082 | None:intergenic | 50.0% | |
| GGGGCTTGAGGTAACATTGA+CGG | - | chr7.3:3654201-3654220 | None:intergenic | 50.0% | |
| GTTTGTGCTGAAAATGCCCC+AGG | - | chr7.3:3653788-3653807 | None:intergenic | 50.0% | |
| TATCAGCAGCAGCAGCAGAA+AGG | + | chr7.3:3654949-3654968 | MS.gene072482:CDS | 50.0% | |
| TCGAATCGGTCCTGAATACC+AGG | + | chr7.3:3652947-3652966 | MS.gene072482:CDS | 50.0% | |
| TGGAACCTTGGGTCTGTTGA+GGG | - | chr7.3:3655097-3655116 | None:intergenic | 50.0% | |
| TGTTGGACTTGGCGTTCTTG+TGG | + | chr7.3:3653694-3653713 | MS.gene072482:CDS | 50.0% | |
| TTACACCCTCAACAGACCCA+AGG | + | chr7.3:3655089-3655108 | MS.gene072482:CDS | 50.0% | |
| !! | AGAAACTTTTGGCTGGAGCG+AGG | + | chr7.3:3653291-3653310 | MS.gene072482:CDS | 50.0% |
| !! | CTGGCGTTGAGAAGTTTTCG+AGG | + | chr7.3:3654005-3654024 | MS.gene072482:CDS | 50.0% |
| !! | TGGTATTCAGGACCGATTCG+AGG | - | chr7.3:3652948-3652967 | None:intergenic | 50.0% |
| AGCCGCTCAGGAAGTAGTTG+AGG | + | chr7.3:3655203-3655222 | MS.gene072482:CDS | 55.0% | |
| AGGCCATGCTCACCTTTCTC+TGG | - | chr7.3:3655156-3655175 | None:intergenic | 55.0% | |
| ATCGTAGATGGTCGGAGTGC+AGG | + | chr7.3:3653237-3653256 | MS.gene072482:CDS | 55.0% | |
| ATGTCTAGCATCAGCCGCTC+AGG | + | chr7.3:3655191-3655210 | MS.gene072482:CDS | 55.0% | |
| CTGGTATGGCCATAGAGCAC+AGG | - | chr7.3:3653525-3653544 | None:intergenic | 55.0% | |
| GAAAGGTGAGCATGGCCTAG+AGG | + | chr7.3:3655158-3655177 | MS.gene072482:CDS | 55.0% | |
| GTTTGCCCATCCCAGTCACA+TGG | + | chr7.3:3653072-3653091 | MS.gene072482:CDS | 55.0% | |
| TGGCCTCGATTACTGGCAAG+AGG | + | chr7.3:3653914-3653933 | MS.gene072482:CDS | 55.0% | |
| ! | AAAGTTGAGGCAGGTGCTGC+TGG | + | chr7.3:3654340-3654359 | MS.gene072482:CDS | 55.0% |
| GCCCCAGGACTGTTCTTCCT+AGG | - | chr7.3:3653773-3653792 | None:intergenic | 60.0% | |
| GCGCCAGAGAAAGGTGAGCA+TGG | + | chr7.3:3655150-3655169 | MS.gene072482:CDS | 60.0% | |
| !! | ATGGTGACGGCGCCAGAGAA+AGG | + | chr7.3:3655141-3655160 | MS.gene072482:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3652873 | 3655480 | 3652873 | ID=MS.gene072482 |
| chr7.3 | mRNA | 3652873 | 3655480 | 3652873 | ID=MS.gene072482.t1;Parent=MS.gene072482 |
| chr7.3 | exon | 3652873 | 3653379 | 3652873 | ID=MS.gene072482.t1.exon1;Parent=MS.gene072482.t1 |
| chr7.3 | CDS | 3652873 | 3653379 | 3652873 | ID=cds.MS.gene072482.t1;Parent=MS.gene072482.t1 |
| chr7.3 | exon | 3653629 | 3655363 | 3653629 | ID=MS.gene072482.t1.exon2;Parent=MS.gene072482.t1 |
| chr7.3 | CDS | 3653629 | 3655363 | 3653629 | ID=cds.MS.gene072482.t1;Parent=MS.gene072482.t1 |
| chr7.3 | exon | 3655413 | 3655480 | 3655413 | ID=MS.gene072482.t1.exon3;Parent=MS.gene072482.t1 |
| chr7.3 | CDS | 3655413 | 3655480 | 3655413 | ID=cds.MS.gene072482.t1;Parent=MS.gene072482.t1 |
| Gene Sequence |
| Protein sequence |
