Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29351.t1 | XP_024627185.1 | 90.2 | 762 | 54 | 3 | 1 | 750 | 1 | 753 | 0.00E+00 | 1332.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29351.t1 | G7KYL3 | 90.2 | 762 | 54 | 3 | 1 | 750 | 1 | 753 | 0.0e+00 | 1332.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050891 | MS.gene29351 | 0.92034 | 1.45E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67159 | MS.gene29351 | PPI |
| MS.gene29351 | MS.gene78584 | PPI |
| MS.gene063225 | MS.gene29351 | PPI |
| MS.gene29351 | MS.gene050892 | PPI |
| MS.gene29351 | MS.gene050942 | PPI |
| MS.gene29351 | MS.gene29350 | PPI |
| MS.gene29351 | MS.gene050891 | PPI |
| MS.gene050738 | MS.gene29351 | PPI |
| MS.gene65461 | MS.gene29351 | PPI |
| MS.gene29351 | MS.gene072482 | PPI |
| MS.gene050893 | MS.gene29351 | PPI |
| MS.gene29351 | MS.gene072542 | PPI |
| MS.gene78585 | MS.gene29351 | PPI |
| MS.gene29351 | MS.gene78588 | PPI |
| MS.gene78587 | MS.gene29351 | PPI |
| MS.gene29351 | MS.gene054416 | PPI |
| MS.gene29351 | MS.gene072483 | PPI |
| MS.gene29351 | MS.gene050890 | PPI |
| MS.gene29351 | MS.gene050889 | PPI |
| MS.gene29351 | MS.gene053360 | PPI |
| MS.gene29351 | MS.gene29352 | PPI |
| MS.gene29351 | MS.gene072484 | PPI |
| MS.gene29351 | MS.gene78586 | PPI |
| MS.gene29351 | MS.gene072485 | PPI |
| MS.gene29351 | MS.gene78585 | PPI |
| MS.gene053360 | MS.gene29351 | PPI |
| MS.gene054416 | MS.gene29351 | PPI |
| MS.gene072481 | MS.gene29351 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29351.t1 | MTR_7g113270 | 92.388 | 762 | 41 | 3 | 1 | 750 | 1 | 757 | 0.0 | 1382 |
| MS.gene29351.t1 | MTR_7g113220 | 90.157 | 762 | 54 | 3 | 1 | 750 | 1 | 753 | 0.0 | 1346 |
| MS.gene29351.t1 | MTR_1g041895 | 69.004 | 813 | 185 | 11 | 1 | 750 | 1 | 809 | 0.0 | 1036 |
| MS.gene29351.t1 | MTR_7g113280 | 69.353 | 757 | 204 | 9 | 1 | 734 | 1 | 752 | 0.0 | 998 |
| MS.gene29351.t1 | MTR_7g113250 | 76.212 | 433 | 91 | 2 | 13 | 433 | 1 | 433 | 0.0 | 666 |
| MS.gene29351.t1 | MTR_7g113250 | 70.115 | 174 | 51 | 1 | 575 | 747 | 436 | 609 | 1.08e-70 | 243 |
| MS.gene29351.t1 | MTR_7g112390 | 60.390 | 462 | 97 | 7 | 105 | 554 | 1 | 388 | 1.55e-157 | 474 |
| MS.gene29351.t1 | MTR_7g112390 | 62.025 | 237 | 46 | 6 | 524 | 750 | 472 | 674 | 2.30e-71 | 247 |
| MS.gene29351.t1 | MTR_7g108470 | 46.608 | 339 | 163 | 4 | 67 | 389 | 139 | 475 | 4.07e-91 | 306 |
| MS.gene29351.t1 | MTR_3g049350 | 63.415 | 246 | 68 | 4 | 265 | 508 | 3 | 228 | 6.99e-87 | 275 |
| MS.gene29351.t1 | MTR_3g049350 | 64.000 | 75 | 26 | 1 | 575 | 648 | 174 | 248 | 2.09e-21 | 95.1 |
| MS.gene29351.t1 | MTR_4g119630 | 41.962 | 367 | 155 | 8 | 20 | 335 | 38 | 397 | 2.35e-79 | 262 |
| MS.gene29351.t1 | MTR_2g436970 | 39.308 | 318 | 166 | 11 | 13 | 316 | 4 | 308 | 3.55e-58 | 204 |
| MS.gene29351.t1 | MTR_7g113290 | 65.289 | 121 | 35 | 3 | 512 | 625 | 7 | 127 | 2.06e-37 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29351.t1 | AT1G09040 | 35.501 | 738 | 358 | 23 | 50 | 724 | 122 | 804 | 7.18e-103 | 337 |
| MS.gene29351.t1 | AT1G09050 | 49.851 | 335 | 143 | 5 | 71 | 385 | 143 | 472 | 1.96e-92 | 309 |
| MS.gene29351.t1 | AT1G09050 | 49.851 | 335 | 143 | 5 | 71 | 385 | 143 | 472 | 1.96e-92 | 309 |
| MS.gene29351.t1 | AT2G47820 | 37.174 | 460 | 198 | 13 | 19 | 392 | 31 | 485 | 1.40e-78 | 269 |
| MS.gene29351.t1 | AT2G47820 | 37.174 | 460 | 198 | 13 | 19 | 392 | 31 | 485 | 1.40e-78 | 269 |
| MS.gene29351.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 9.60e-77 | 266 |
| MS.gene29351.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 9.60e-77 | 266 |
Find 153 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATTTCAAAGTCGTTTA+TGG | 0.134164 | 7.2:-3905169 | MS.gene29351:intron |
| GCGGAAAGTCATCTGCTTTA+AGG | 0.171768 | 7.2:-3904513 | MS.gene29351:CDS |
| ATCATTATAATTCTGGTTAA+AGG | 0.201090 | 7.2:+3906410 | None:intergenic |
| TGAAAATATCATTATAATTC+TGG | 0.213867 | 7.2:+3906403 | None:intergenic |
| CTTTGCCGACTTCTGTTTAA+TGG | 0.228638 | 7.2:+3904372 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.2:-3903582 | MS.gene29351:CDS |
| CGCATTGTTGAGAATTCTTC+AGG | 0.254199 | 7.2:-3903947 | MS.gene29351:CDS |
| CCAAAAGTAATGATCTCTTC+TGG | 0.256574 | 7.2:-3904918 | MS.gene29351:CDS |
| TGTTACCTCCAATGATTATC+TGG | 0.258416 | 7.2:-3904830 | MS.gene29351:CDS |
| TCCAATGCTCTAACTGTTAA+TGG | 0.262771 | 7.2:+3903512 | None:intergenic |
| GTCAATTTCCTCCGTTTAAT+AGG | 0.265888 | 7.2:+3903995 | None:intergenic |
| AGCTGTTTGGCCTCGCTTGC+TGG | 0.271118 | 7.2:-3904893 | MS.gene29351:CDS |
| TTCAATATTTGACAGGATTT+CGG | 0.272657 | 7.2:-3904951 | MS.gene29351:CDS |
| TAGTTGGACCACAAACATTT+TGG | 0.284443 | 7.2:+3903882 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.309396 | 7.2:-3904988 | MS.gene29351:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.2:-3904906 | MS.gene29351:CDS |
| GTTGCCTCGGTCCGGCAAAA+AGG | 0.319814 | 7.2:+3905995 | None:intergenic |
| CCAGAAGAGATCATTACTTT+TGG | 0.323183 | 7.2:+3904918 | None:intergenic |
| ACTTTAGGCACTGAATTAAC+AGG | 0.335113 | 7.2:+3904475 | None:intergenic |
| TGAAAGGATCTTGGTGTGTC+TGG | 0.338299 | 7.2:+3903435 | None:intergenic |
| TCTTTGAGCACGAGAATATT+CGG | 0.365137 | 7.2:+3904703 | None:intergenic |
| CGGAAAGTCATCTGCTTTAA+GGG | 0.369059 | 7.2:-3904512 | MS.gene29351:CDS |
| CATGGTTATTGATACCAGTT+TGG | 0.371834 | 7.2:-3904542 | MS.gene29351:CDS |
| CCTATTCGAGGACTGAATTC+AGG | 0.372601 | 7.2:+3906357 | None:intergenic |
| TGCTTCTCGGGAAGTGGTTA+AGG | 0.374030 | 7.2:-3903618 | MS.gene29351:CDS |
| CTCATTGCAGCTACCAACTT+TGG | 0.379784 | 7.2:+3904669 | None:intergenic |
| TGTCTCCTCGGATTCATATC+AGG | 0.382635 | 7.2:+3903551 | None:intergenic |
| AATGAGGAAGAGCCAGAAAA+TGG | 0.392377 | 7.2:-3904652 | MS.gene29351:CDS |
| TAAAGATCATATCAAATTCA+TGG | 0.393568 | 7.2:-3904560 | MS.gene29351:CDS |
| CACCTCTGCACCCATCAGTT+TGG | 0.395218 | 7.2:+3904143 | None:intergenic |
| GAGAATTCTTCAGGATGTTT+AGG | 0.396514 | 7.2:-3903938 | MS.gene29351:CDS |
| ACTAGGCTTGGCATGGAACC+TGG | 0.407506 | 7.2:-3905042 | MS.gene29351:CDS |
| CATGTCTAACATCTGCTTCT+CGG | 0.417095 | 7.2:-3903631 | MS.gene29351:CDS |
| TGGTCTTCTGAGAGATAGTA+AGG | 0.418389 | 7.2:-3904239 | MS.gene29351:CDS |
| CTCTTAGCTTCCACCTTCCT+CGG | 0.419232 | 7.2:+3904193 | None:intergenic |
| AAAGGGAGAAAATGTATGAT+AGG | 0.419409 | 7.2:-3906024 | MS.gene29351:CDS |
| TCATTCTGCTGATGACTAGT+TGG | 0.422211 | 7.2:+3903866 | None:intergenic |
| CTTTAGGCCTTGCTCATCTT+CGG | 0.428940 | 7.2:+3903664 | None:intergenic |
| CAAAAGTAATGATCTCTTCT+GGG | 0.437354 | 7.2:-3904917 | MS.gene29351:CDS |
| TCTGATTTCACAATCATAGA+AGG | 0.440778 | 7.2:+3906312 | None:intergenic |
| GAAGCATCTTCTAATTCAAC+TGG | 0.445905 | 7.2:+3904274 | None:intergenic |
| CTTTCCGCCATGCACCAAAC+TGG | 0.447484 | 7.2:+3904528 | None:intergenic |
| ATGCAGCTGTTCCTATTAAA+CGG | 0.448083 | 7.2:-3904006 | MS.gene29351:CDS |
| CAGGATGTTTAGGCTTCTCT+CGG | 0.448262 | 7.2:-3903928 | MS.gene29351:CDS |
| ATGTCTAACATCTGCTTCTC+GGG | 0.448570 | 7.2:-3903630 | MS.gene29351:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.2:+3904847 | None:intergenic |
| TTTACTGTAAGTAGAAGATC+GGG | 0.451792 | 7.2:+3904579 | None:intergenic |
| CCTGAATTCAGTCCTCGAAT+AGG | 0.459730 | 7.2:-3906357 | MS.gene29351:CDS |
| GAGATAATTCAATATTTGAC+AGG | 0.461702 | 7.2:-3904958 | MS.gene29351:CDS |
| AAACTGATGGATATCTTAGA+TGG | 0.462004 | 7.2:-3906065 | MS.gene29351:CDS |
| ATCTTAGATGGTCGAAGTGC+AGG | 0.466134 | 7.2:-3906053 | MS.gene29351:CDS |
| CTCGCTTGCTGGCAAGAGGT+TGG | 0.466892 | 7.2:-3904882 | MS.gene29351:CDS |
| TTGAGAATCCCTTGTGATGT+TGG | 0.468399 | 7.2:-3903590 | MS.gene29351:CDS |
| GTAGGTATTGGTAAGGAGAA+GGG | 0.470337 | 7.2:-3905072 | MS.gene29351:CDS |
| AGCAGACAGAAGTGTGGAAG+AGG | 0.472115 | 7.2:-3903828 | MS.gene29351:CDS |
| GACTCATTCGAAGCGAAAGC+TGG | 0.474737 | 7.2:+3906289 | None:intergenic |
| AACAATTCACCGAGAACAAA+GGG | 0.476097 | 7.2:-3906128 | MS.gene29351:CDS |
| GATGCAAACCAAAATGTTTG+TGG | 0.482630 | 7.2:-3903890 | MS.gene29351:CDS |
| CTTGTGGAAGCTGTAGGTAT+TGG | 0.483654 | 7.2:-3905084 | MS.gene29351:CDS |
| TAGTTCATGTTGCCTCGGTC+CGG | 0.493742 | 7.2:+3905987 | None:intergenic |
| AAAGCTTTGCAAGCTGGTGC+AGG | 0.494056 | 7.2:+3905000 | None:intergenic |
| AACGCTTGAACGTCCTTCCC+AGG | 0.495754 | 7.2:+3905024 | None:intergenic |
| TTTCTAGAGCTCTGTCTCCT+CGG | 0.499320 | 7.2:+3903539 | None:intergenic |
| GAAGACAAAGCTTTGCAAGC+TGG | 0.500111 | 7.2:+3904994 | None:intergenic |
| CCAACATCTACCTCCACTTT+AGG | 0.500316 | 7.2:+3904460 | None:intergenic |
| GTTCCATGCCAAGCCTAGTA+AGG | 0.502669 | 7.2:+3905046 | None:intergenic |
| GGCAAGGACTGAAAGGATCT+TGG | 0.502833 | 7.2:+3903426 | None:intergenic |
| AACATCTGCTTCTCGGGAAG+TGG | 0.504803 | 7.2:-3903624 | MS.gene29351:CDS |
| CGAAGATGAGCAAGGCCTAA+AGG | 0.505503 | 7.2:-3903663 | MS.gene29351:CDS |
| CTTTACTGTAAGTAGAAGAT+CGG | 0.506445 | 7.2:+3904578 | None:intergenic |
| ACCATTAACAGTTAGAGCAT+TGG | 0.508438 | 7.2:-3903513 | MS.gene29351:CDS |
| AATTGATGATTCACCGAGGA+AGG | 0.510840 | 7.2:-3904206 | MS.gene29351:CDS |
| ATCACTCCATGTGTCTGAGA+TGG | 0.517171 | 7.2:+3906212 | None:intergenic |
| TTCATGGACCATACGTCTGA+TGG | 0.518088 | 7.2:-3906384 | MS.gene29351:CDS |
| TCGAATAGGTCATGCATACC+AGG | 0.522827 | 7.2:-3906343 | MS.gene29351:CDS |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.2:+3904796 | None:intergenic |
| CAACCTCTTGCCAGCAAGCG+AGG | 0.527263 | 7.2:+3904883 | None:intergenic |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.2:-3904778 | MS.gene29351:CDS |
| ATTGATACCAGTTTGGTGCA+TGG | 0.532780 | 7.2:-3904535 | MS.gene29351:CDS |
| TTGAAGTCTACTGTTGAACT+TGG | 0.533877 | 7.2:-3905111 | MS.gene29351:CDS |
| GAAGAAGAAGAAGCCAAAGT+TGG | 0.537968 | 7.2:-3904682 | MS.gene29351:CDS |
| TCCTTTCAGTCCTTGCCGCA+AGG | 0.543859 | 7.2:-3903420 | MS.gene29351:CDS |
| TGTAGGTATTGGTAAGGAGA+AGG | 0.546396 | 7.2:-3905073 | MS.gene29351:CDS |
| TGTTAATTCAGTGCCTAAAG+TGG | 0.547470 | 7.2:-3904473 | MS.gene29351:CDS |
| TGAACATCTTCTGAATCAGC+AGG | 0.549114 | 7.2:+3906267 | None:intergenic |
| CTAGGCTTGGCATGGAACCT+GGG | 0.550586 | 7.2:-3905041 | MS.gene29351:CDS |
| GCTTGGCATGGAACCTGGGA+AGG | 0.551229 | 7.2:-3905037 | MS.gene29351:CDS |
| TTTCACCTTCAACATACCTC+AGG | 0.551354 | 7.2:-3903729 | MS.gene29351:CDS |
| TTCAATCAGAGAGTTAGATC+AGG | 0.551942 | 7.2:-3904040 | MS.gene29351:CDS |
| TGTTGAACTTGGCGTACTTG+TGG | 0.555243 | 7.2:-3905100 | MS.gene29351:CDS |
| CGAGGAAGGTGGAAGCTAAG+AGG | 0.555775 | 7.2:-3904192 | MS.gene29351:CDS |
| TGGCCTCGCTTGCTGGCAAG+AGG | 0.555857 | 7.2:-3904886 | MS.gene29351:CDS |
| GACAATAGTTCATGTTGCCT+CGG | 0.558165 | 7.2:+3905982 | None:intergenic |
| TCACTCCATGTGTCTGAGAT+GGG | 0.562681 | 7.2:+3906213 | None:intergenic |
| TTCACCGAGAACAAAGGGAT+GGG | 0.565277 | 7.2:-3906123 | MS.gene29351:CDS |
| GCCTTGCGGCAAGGACTGAA+AGG | 0.566399 | 7.2:+3903419 | None:intergenic |
| TAGGTATTGGTAAGGAGAAG+GGG | 0.566837 | 7.2:-3905071 | MS.gene29351:CDS |
| GGAAGCTGTAGGTATTGGTA+AGG | 0.569902 | 7.2:-3905079 | MS.gene29351:CDS |
| TGGTATGCATGACCTATTCG+AGG | 0.570623 | 7.2:+3906345 | None:intergenic |
| AAAATATCAACCAAACTGAT+GGG | 0.570703 | 7.2:-3904153 | MS.gene29351:CDS |
| TCACCGAGAACAAAGGGATG+GGG | 0.571170 | 7.2:-3906122 | MS.gene29351:CDS |
| GATGCTTCTACGATGACTAC+TGG | 0.571992 | 7.2:-3904259 | MS.gene29351:CDS |
| CATGTACGAGCCTTGCGGCA+AGG | 0.572654 | 7.2:+3903410 | None:intergenic |
| GGACCTTACTAGGCTTGGCA+TGG | 0.573430 | 7.2:-3905049 | MS.gene29351:CDS |
| CGAGAAGCAGATGTTAGACA+TGG | 0.576793 | 7.2:+3903632 | None:intergenic |
| CAGGATCTCCATCAGACGTA+TGG | 0.578249 | 7.2:+3906376 | None:intergenic |
| TGCCGCAAGGCTCGTACATG+AGG | 0.578280 | 7.2:-3903407 | None:intergenic |
| ATTTCAAAGTCGTTTATGGA+GGG | 0.578872 | 7.2:-3905165 | MS.gene29351:CDS |
| CACTAACAGAATCAAAGTAA+TGG | 0.579542 | 7.2:+3904752 | None:intergenic |
| TAAAACCATTAAACAGAAGT+CGG | 0.581290 | 7.2:-3904377 | MS.gene29351:CDS |
| AAATATTGAATTATCTCACT+AGG | 0.581479 | 7.2:+3904964 | None:intergenic |
| GATTTCAAAGTCGTTTATGG+AGG | 0.583379 | 7.2:-3905166 | MS.gene29351:CDS |
| TGATGATTCACCGAGGAAGG+TGG | 0.590215 | 7.2:-3904203 | MS.gene29351:CDS |
| GATACCAATAGACTTTCTGA+AGG | 0.590512 | 7.2:-3904337 | MS.gene29351:CDS |
| AAATAGCAAAACAGTAGCAA+TGG | 0.591008 | 7.2:-3903690 | MS.gene29351:CDS |
| TCATAGAAGGAATTTCCGCC+TGG | 0.592210 | 7.2:+3906325 | None:intergenic |
| AAGTAGAAGATCGGGGCTTG+AGG | 0.596284 | 7.2:+3904587 | None:intergenic |
| AAACAATTCACCGAGAACAA+AGG | 0.596800 | 7.2:-3906129 | MS.gene29351:CDS |
| ATGGCAGCCGAAGATGAGCA+AGG | 0.597264 | 7.2:-3903671 | MS.gene29351:CDS |
| GATGGGTAAATCAATTGCAA+AGG | 0.601126 | 7.2:+3906230 | None:intergenic |
| ATGCTCTAACTGTTAATGGT+CGG | 0.603464 | 7.2:+3903516 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.604418 | 7.2:+3903581 | None:intergenic |
| CACCGAGAACAAAGGGATGG+GGG | 0.606182 | 7.2:-3906121 | MS.gene29351:CDS |
| ATTCACCGAGAACAAAGGGA+TGG | 0.612425 | 7.2:-3906124 | MS.gene29351:CDS |
| TCAAAGTCGTTTATGGAGGG+CGG | 0.617461 | 7.2:-3905162 | MS.gene29351:CDS |
| TGGTGCCTGAGGTATGTTGA+AGG | 0.618245 | 7.2:+3903724 | None:intergenic |
| AGGGCTTAAATATACGAGGA+AGG | 0.621529 | 7.2:-3904422 | MS.gene29351:CDS |
| TGCCTCATGTACGAGCCTTG+CGG | 0.621550 | 7.2:+3903405 | None:intergenic |
| TCAGACTTCGATGGTGCCTG+AGG | 0.621736 | 7.2:+3903713 | None:intergenic |
| AACCAAACTGATGGGTGCAG+AGG | 0.625427 | 7.2:-3904145 | MS.gene29351:CDS |
| ATTTACCCATCTCAGACACA+TGG | 0.629487 | 7.2:-3906218 | MS.gene29351:CDS |
| ACATCACAAGGGATTCTCAA+AGG | 0.640112 | 7.2:+3903593 | None:intergenic |
| GAGGAAGGTAAACCATAGCA+AGG | 0.643269 | 7.2:-3904407 | MS.gene29351:CDS |
| CAAAGTTGGTAGCTGCAATG+AGG | 0.643587 | 7.2:-3904668 | MS.gene29351:CDS |
| TAATTCAGTGCCTAAAGTGG+AGG | 0.644027 | 7.2:-3904470 | MS.gene29351:CDS |
| GGTCTTCTGAGAGATAGTAA+GGG | 0.645473 | 7.2:-3904238 | MS.gene29351:CDS |
| CTTCTGAGAGATAGTAAGGG+TGG | 0.653143 | 7.2:-3904235 | MS.gene29351:CDS |
| GGCGTACTTGTGGAAGCTGT+AGG | 0.654942 | 7.2:-3905090 | MS.gene29351:CDS |
| CCTAAAGTGGAGGTAGATGT+TGG | 0.657169 | 7.2:-3904460 | MS.gene29351:CDS |
| AACAGCCTGATATGAATCCG+AGG | 0.663816 | 7.2:-3903556 | MS.gene29351:CDS |
| TTCTTCAGCAGACAGAAGTG+TGG | 0.665376 | 7.2:-3903834 | MS.gene29351:CDS |
| GATACCAGTTTGGTGCATGG+CGG | 0.678268 | 7.2:-3904532 | MS.gene29351:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.2:-3904856 | MS.gene29351:CDS |
| AGGTATTGGTAAGGAGAAGG+GGG | 0.711130 | 7.2:-3905070 | MS.gene29351:CDS |
| CAGCTGTTCCTATTAAACGG+AGG | 0.715033 | 7.2:-3904003 | MS.gene29351:CDS |
| TGCAGAGGTGTATCTAACAG+TGG | 0.716698 | 7.2:-3904130 | MS.gene29351:CDS |
| ATAAAGGGCTTAAATATACG+AGG | 0.718352 | 7.2:-3904426 | MS.gene29351:CDS |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 7.2:+3903948 | None:intergenic |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.2:+3903582 | None:intergenic |
| TTACTGTAAGTAGAAGATCG+GGG | 0.727493 | 7.2:+3904580 | None:intergenic |
| TTGATAATAATCAATTGACG+AGG | 0.738361 | 7.2:-3904078 | MS.gene29351:CDS |
| AATAGGTCATGCATACCAGG+CGG | 0.749167 | 7.2:-3906340 | MS.gene29351:CDS |
| CTTCAATTGATGATTCACCG+AGG | 0.774642 | 7.2:-3904210 | MS.gene29351:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAAT+TGG | + | chr7.2:3904564-3904583 | None:intergenic | 0.0% |
| !! | TGAAAATATCATTATAATTC+TGG | + | chr7.2:3903426-3903445 | None:intergenic | 15.0% |
| !! | TTGGTTGTAAAAAATATAAA+GGG | - | chr7.2:3905385-3905404 | MS.gene29351:intron | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.2:3903426-3903445 | MS.gene29351:CDS | 15.0% |
| !! | AAATATTGAATTATCTCACT+AGG | + | chr7.2:3904865-3904884 | None:intergenic | 20.0% |
| !! | CATAGAACTTCAAATAATTA+TGG | + | chr7.2:3904509-3904528 | None:intergenic | 20.0% |
| !! | GTTAATAAATCTGCAAAATA+TGG | + | chr7.2:3904244-3904263 | None:intergenic | 20.0% |
| !! | GTTGGTTGTAAAAAATATAA+AGG | - | chr7.2:3905384-3905403 | MS.gene29351:intron | 20.0% |
| !! | TAAAGATCATATCAAATTCA+TGG | - | chr7.2:3905266-3905285 | MS.gene29351:intron | 20.0% |
| !!! | AAGGCTATATTTAAAATTAC+AGG | + | chr7.2:3904116-3904135 | None:intergenic | 20.0% |
| !!! | ATCATTATAATTCTGGTTAA+AGG | + | chr7.2:3903419-3903438 | None:intergenic | 20.0% |
| !!! | GAAATACTTTCATTTTACTA+TGG | - | chr7.2:3903727-3903746 | MS.gene29351:CDS | 20.0% |
| ! | AAAAATATCAACCAAACTGA+TGG | - | chr7.2:3905672-3905691 | MS.gene29351:intron | 25.0% |
| ! | AAAATATCAACCAAACTGAT+GGG | - | chr7.2:3905673-3905692 | MS.gene29351:intron | 25.0% |
| ! | AAGAAAAACCAGATAATCAT+TGG | + | chr7.2:3905007-3905026 | None:intergenic | 25.0% |
| ! | AATAAAAGTCACTAGGAATA+AGG | - | chr7.2:3904274-3904293 | MS.gene29351:CDS | 25.0% |
| ! | ATAAAAGTCACTAGGAATAA+GGG | - | chr7.2:3904275-3904294 | MS.gene29351:CDS | 25.0% |
| ! | ATGCAATTCATTAACAATAG+AGG | + | chr7.2:3903949-3903968 | None:intergenic | 25.0% |
| ! | GAGATAATTCAATATTTGAC+AGG | - | chr7.2:3904868-3904887 | MS.gene29351:CDS | 25.0% |
| ! | GTAAAAGAATAAAAGTCACT+AGG | - | chr7.2:3904267-3904286 | MS.gene29351:CDS | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | + | chr7.2:3904637-3904656 | None:intergenic | 25.0% |
| ! | TAAAACCATTAAACAGAAGT+CGG | - | chr7.2:3905449-3905468 | MS.gene29351:intron | 25.0% |
| ! | TAGTTACAATGTAATTACGA+TGG | - | chr7.2:3904448-3904467 | MS.gene29351:CDS | 25.0% |
| ! | TGGAGTGATTTAAAGAAAAA+GGG | + | chr7.2:3904544-3904563 | None:intergenic | 25.0% |
| ! | TTCAATATTTGACAGGATTT+CGG | - | chr7.2:3904875-3904894 | MS.gene29351:CDS | 25.0% |
| ! | TTGGAGTGATTTAAAGAAAA+AGG | + | chr7.2:3904545-3904564 | None:intergenic | 25.0% |
| !! | ATTATCATGTGTCTTTTTAC+TGG | + | chr7.2:3905727-3905746 | None:intergenic | 25.0% |
| !! | ATTTTGCTTTAACAGTAATC+TGG | - | chr7.2:3904182-3904201 | MS.gene29351:CDS | 25.0% |
| !! | GTGACTTTTATTCTTTTACA+TGG | + | chr7.2:3904266-3904285 | None:intergenic | 25.0% |
| !! | TTGATAATAATCAATTGACG+AGG | - | chr7.2:3905748-3905767 | MS.gene29351:intron | 25.0% |
| !!! | GATACAAATAGTTTTGTACT+AGG | - | chr7.2:3903640-3903659 | MS.gene29351:CDS | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+CGG | - | chr7.2:3903655-3903674 | MS.gene29351:CDS | 25.0% |
| !!! | TACTAGGTTTGTTTATTTTC+GGG | - | chr7.2:3903656-3903675 | MS.gene29351:CDS | 25.0% |
| AAAAACCAGATAATCATTGG+AGG | + | chr7.2:3905004-3905023 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+AGG | - | chr7.2:3903802-3903821 | MS.gene29351:CDS | 30.0% | |
| AAATAGCAAAACAGTAGCAA+TGG | - | chr7.2:3906136-3906155 | MS.gene29351:CDS | 30.0% | |
| AATATTATCACACTTCGAGA+AGG | + | chr7.2:3904148-3904167 | None:intergenic | 30.0% | |
| ACAGATTTCAAAGTCGTTTA+TGG | - | chr7.2:3904657-3904676 | MS.gene29351:CDS | 30.0% | |
| ACCACTAAATGTGATCATAT+AGG | + | chr7.2:3904006-3904025 | None:intergenic | 30.0% | |
| ACTAGCAAAGAAATTCACAT+TGG | + | chr7.2:3904075-3904094 | None:intergenic | 30.0% | |
| ATAAAGGGCTTAAATATACG+AGG | - | chr7.2:3905400-3905419 | MS.gene29351:intron | 30.0% | |
| ATTTCAAAGTCGTTTATGGA+GGG | - | chr7.2:3904661-3904680 | MS.gene29351:CDS | 30.0% | |
| CAAAAGTAATGATCTCTTCT+GGG | - | chr7.2:3904909-3904928 | MS.gene29351:CDS | 30.0% | |
| CAAATAATTATGGTATGTCG+CGG | + | chr7.2:3904499-3904518 | None:intergenic | 30.0% | |
| CACTAACAGAATCAAAGTAA+TGG | + | chr7.2:3905077-3905096 | None:intergenic | 30.0% | |
| CTTTACTGTAAGTAGAAGAT+CGG | + | chr7.2:3905251-3905270 | None:intergenic | 30.0% | |
| TAAGGGACTAAATTATCTGT+TGG | - | chr7.2:3904292-3904311 | MS.gene29351:CDS | 30.0% | |
| TCTGATTTCACAATCATAGA+AGG | + | chr7.2:3903517-3903536 | None:intergenic | 30.0% | |
| TTTACTGTAAGTAGAAGATC+GGG | + | chr7.2:3905250-3905269 | None:intergenic | 30.0% | |
| ! | AAACTGATGGATATCTTAGA+TGG | - | chr7.2:3903761-3903780 | MS.gene29351:CDS | 30.0% |
| ! | GACTTCTGTTTAATGGTTTT+AGG | + | chr7.2:3905450-3905469 | None:intergenic | 30.0% |
| ! | GATTTAAAGAAAAAGGGTAC+TGG | + | chr7.2:3904538-3904557 | None:intergenic | 30.0% |
| ! | GGAAAGTTTTACAAAACTGA+TGG | - | chr7.2:3903748-3903767 | MS.gene29351:CDS | 30.0% |
| ! | TAACAGTAATCTGGTTTATG+TGG | - | chr7.2:3904191-3904210 | MS.gene29351:CDS | 30.0% |
| ! | TCTTCATTTGATCCATTTTC+TGG | + | chr7.2:3905189-3905208 | None:intergenic | 30.0% |
| ! | TCTTTCTTTTTCTGTCTCTT+TGG | + | chr7.2:3906368-3906387 | None:intergenic | 30.0% |
| ! | TTTTCCTTCAGAAAGTCTAT+TGG | + | chr7.2:3905496-3905515 | None:intergenic | 30.0% |
| !! | TGCATTTTATTTATGAGCTC+CGG | - | chr7.2:3904318-3904337 | MS.gene29351:CDS | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+TGG | - | chr7.2:3905012-3905031 | MS.gene29351:CDS | 30.0% |
| AAACAATTCACCGAGAACAA+AGG | - | chr7.2:3903697-3903716 | MS.gene29351:CDS | 35.0% | |
| AACAATTCACCGAGAACAAA+GGG | - | chr7.2:3903698-3903717 | MS.gene29351:CDS | 35.0% | |
| ACCATTAACAGTTAGAGCAT+TGG | - | chr7.2:3906313-3906332 | MS.gene29351:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+CGG | - | chr7.2:3905820-3905839 | MS.gene29351:intron | 35.0% | |
| ATGCTCTAACTGTTAATGGT+CGG | + | chr7.2:3906313-3906332 | None:intergenic | 35.0% | |
| ATTCCATTTGTCTGACAGAT+TGG | - | chr7.2:3903975-3903994 | MS.gene29351:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.2:3905284-3905303 | MS.gene29351:intron | 35.0% | |
| CCAAAAGTAATGATCTCTTC+TGG | - | chr7.2:3904908-3904927 | MS.gene29351:CDS | 35.0% | |
| CGGTAAAATGATAATTCGCT+CGG | + | chr7.2:3904479-3904498 | None:intergenic | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr7.2:3905881-3905900 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGGATGTTT+AGG | - | chr7.2:3905888-3905907 | MS.gene29351:intron | 35.0% | |
| GATACCAATAGACTTTCTGA+AGG | - | chr7.2:3905489-3905508 | MS.gene29351:intron | 35.0% | |
| GATGCAAACCAAAATGTTTG+TGG | - | chr7.2:3905936-3905955 | MS.gene29351:intron | 35.0% | |
| GATGGGTAAATCAATTGCAA+AGG | + | chr7.2:3903599-3903618 | None:intergenic | 35.0% | |
| GATTTCAAAGTCGTTTATGG+AGG | - | chr7.2:3904660-3904679 | MS.gene29351:CDS | 35.0% | |
| GCCTATATGATCACATTTAG+TGG | - | chr7.2:3904002-3904021 | MS.gene29351:CDS | 35.0% | |
| GTCAATTTCCTCCGTTTAAT+AGG | + | chr7.2:3905834-3905853 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.2:3905048-3905067 | MS.gene29351:CDS | 35.0% | |
| TCCAATGCTCTAACTGTTAA+TGG | + | chr7.2:3906317-3906336 | None:intergenic | 35.0% | |
| TCTTTGAGCACGAGAATATT+CGG | + | chr7.2:3905126-3905145 | None:intergenic | 35.0% | |
| TGTTAATTCAGTGCCTAAAG+TGG | - | chr7.2:3905353-3905372 | MS.gene29351:intron | 35.0% | |
| TGTTACCTCCAATGATTATC+TGG | - | chr7.2:3904996-3905015 | MS.gene29351:CDS | 35.0% | |
| TTACTGTAAGTAGAAGATCG+GGG | + | chr7.2:3905249-3905268 | None:intergenic | 35.0% | |
| TTCAATCAGAGAGTTAGATC+AGG | - | chr7.2:3905786-3905805 | MS.gene29351:intron | 35.0% | |
| TTCGAGAAGGAAGTTAAAGA+AGG | + | chr7.2:3904135-3904154 | None:intergenic | 35.0% | |
| TTGAAGTCTACTGTTGAACT+TGG | - | chr7.2:3904715-3904734 | MS.gene29351:CDS | 35.0% | |
| ! | ATAGGACATAACCTTTTTGC+CGG | - | chr7.2:3903820-3903839 | MS.gene29351:CDS | 35.0% |
| ! | ATGCTTAGATTGTTTCTCCT+AGG | - | chr7.2:3904344-3904363 | MS.gene29351:CDS | 35.0% |
| ! | CCAGAAGAGATCATTACTTT+TGG | + | chr7.2:3904911-3904930 | None:intergenic | 35.0% |
| ! | CTGAAAGCTTCACTAGTTTA+TGG | - | chr7.2:3904384-3904403 | MS.gene29351:CDS | 35.0% |
| ! | GAAGCATCTTCTAATTCAAC+TGG | + | chr7.2:3905555-3905574 | None:intergenic | 35.0% |
| ! | TAGTTGGACCACAAACATTT+TGG | + | chr7.2:3905947-3905966 | None:intergenic | 35.0% |
| !! | AAAGAAAAAGGGTACTGGTA+TGG | + | chr7.2:3904533-3904552 | None:intergenic | 35.0% |
| !! | ACTTTAGGCACTGAATTAAC+AGG | + | chr7.2:3905354-3905373 | None:intergenic | 35.0% |
| !! | GCATTTTATTTATGAGCTCC+GGG | - | chr7.2:3904319-3904338 | MS.gene29351:CDS | 35.0% |
| !!! | TTGCTATTTTCAGACTTCGA+TGG | + | chr7.2:3906125-3906144 | None:intergenic | 35.0% |
| AAGCCAATCTGTCAGACAAA+TGG | + | chr7.2:3903981-3904000 | None:intergenic | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+TGG | - | chr7.2:3905174-3905193 | MS.gene29351:intron | 40.0% | |
| ACATCACAAGGGATTCTCAA+AGG | + | chr7.2:3906236-3906255 | None:intergenic | 40.0% | |
| AGGGCTTAAATATACGAGGA+AGG | - | chr7.2:3905404-3905423 | MS.gene29351:intron | 40.0% | |
| ATGTCTAACATCTGCTTCTC+GGG | - | chr7.2:3906196-3906215 | MS.gene29351:CDS | 40.0% | |
| ATTTACCCATCTCAGACACA+TGG | - | chr7.2:3903608-3903627 | MS.gene29351:CDS | 40.0% | |
| CATGTCTAACATCTGCTTCT+CGG | - | chr7.2:3906195-3906214 | MS.gene29351:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | + | chr7.2:3906247-3906266 | None:intergenic | 40.0% | |
| CGAAGTGCAGGAAGAAAAAA+GGG | - | chr7.2:3903785-3903804 | MS.gene29351:CDS | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr7.2:3905879-3905898 | MS.gene29351:intron | 40.0% | |
| CGGAAAGTCATCTGCTTTAA+GGG | - | chr7.2:3905314-3905333 | MS.gene29351:intron | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | + | chr7.2:3905033-3905052 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGCCAAAGT+TGG | - | chr7.2:3905144-3905163 | MS.gene29351:CDS | 40.0% | |
| GACAATAGTTCATGTTGCCT+CGG | + | chr7.2:3903847-3903866 | None:intergenic | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.2:3904982-3905001 | None:intergenic | 40.0% | |
| TAATTCAGTGCCTAAAGTGG+AGG | - | chr7.2:3905356-3905375 | MS.gene29351:intron | 40.0% | |
| TCATTCTGCTGATGACTAGT+TGG | + | chr7.2:3905963-3905982 | None:intergenic | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | + | chr7.2:3906248-3906267 | None:intergenic | 40.0% | |
| TCGAAGTGCAGGAAGAAAAA+AGG | - | chr7.2:3903784-3903803 | MS.gene29351:CDS | 40.0% | |
| TGAACATCTTCTGAATCAGC+AGG | + | chr7.2:3903562-3903581 | None:intergenic | 40.0% | |
| TTGAGAATCCCTTGTGATGT+TGG | - | chr7.2:3906236-3906255 | MS.gene29351:CDS | 40.0% | |
| TTTCACCTTCAACATACCTC+AGG | - | chr7.2:3906097-3906116 | MS.gene29351:CDS | 40.0% | |
| ! | AATTGATGATTCACCGAGGA+AGG | - | chr7.2:3905620-3905639 | MS.gene29351:intron | 40.0% |
| ! | CTTCAATTGATGATTCACCG+AGG | - | chr7.2:3905616-3905635 | MS.gene29351:intron | 40.0% |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr7.2:3906181-3906200 | None:intergenic | 40.0% |
| ! | GGTCTTCTGAGAGATAGTAA+GGG | - | chr7.2:3905588-3905607 | MS.gene29351:intron | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.2:3904838-3904857 | MS.gene29351:CDS | 40.0% |
| ! | TGGTCTTCTGAGAGATAGTA+AGG | - | chr7.2:3905587-3905606 | MS.gene29351:intron | 40.0% |
| !! | ATTGATACCAGTTTGGTGCA+TGG | - | chr7.2:3905291-3905310 | MS.gene29351:intron | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | - | chr7.2:3905031-3905050 | MS.gene29351:CDS | 40.0% |
| !! | CTTTGCCGACTTCTGTTTAA+TGG | + | chr7.2:3905457-3905476 | None:intergenic | 40.0% |
| !! | GTAGGTATTGGTAAGGAGAA+GGG | - | chr7.2:3904754-3904773 | MS.gene29351:CDS | 40.0% |
| !! | TAGGTATTGGTAAGGAGAAG+GGG | - | chr7.2:3904755-3904774 | MS.gene29351:CDS | 40.0% |
| !! | TGTAGGTATTGGTAAGGAGA+AGG | - | chr7.2:3904753-3904772 | MS.gene29351:CDS | 40.0% |
| AACAGCCTGATATGAATCCG+AGG | - | chr7.2:3906270-3906289 | MS.gene29351:CDS | 45.0% | |
| AATAGGTCATGCATACCAGG+CGG | - | chr7.2:3903486-3903505 | MS.gene29351:CDS | 45.0% | |
| ATCACTCCATGTGTCTGAGA+TGG | + | chr7.2:3903617-3903636 | None:intergenic | 45.0% | |
| ATCTCAAGATGCTCTGTCAC+AGG | - | chr7.2:3903894-3903913 | MS.gene29351:CDS | 45.0% | |
| ATCTTAGATGGTCGAAGTGC+AGG | - | chr7.2:3903773-3903792 | MS.gene29351:CDS | 45.0% | |
| ATTCACCGAGAACAAAGGGA+TGG | - | chr7.2:3903702-3903721 | MS.gene29351:CDS | 45.0% | |
| CAGCTGTTCCTATTAAACGG+AGG | - | chr7.2:3905823-3905842 | MS.gene29351:intron | 45.0% | |
| CAGGATGTTTAGGCTTCTCT+CGG | - | chr7.2:3905898-3905917 | MS.gene29351:intron | 45.0% | |
| CCAACATCTACCTCCACTTT+AGG | + | chr7.2:3905369-3905388 | None:intergenic | 45.0% | |
| CCTAAAGTGGAGGTAGATGT+TGG | - | chr7.2:3905366-3905385 | MS.gene29351:intron | 45.0% | |
| CCTATTCGAGGACTGAATTC+AGG | + | chr7.2:3903472-3903491 | None:intergenic | 45.0% | |
| CCTGAATTCAGTCCTCGAAT+AGG | - | chr7.2:3903469-3903488 | MS.gene29351:CDS | 45.0% | |
| CGAGAAGCAGATGTTAGACA+TGG | + | chr7.2:3906197-3906216 | None:intergenic | 45.0% | |
| CTCATTGCAGCTACCAACTT+TGG | + | chr7.2:3905160-3905179 | None:intergenic | 45.0% | |
| CTTGTGGAAGCTGTAGGTAT+TGG | - | chr7.2:3904742-3904761 | MS.gene29351:CDS | 45.0% | |
| CTTTAGGCCTTGCTCATCTT+CGG | + | chr7.2:3906165-3906184 | None:intergenic | 45.0% | |
| GAAGACAAAGCTTTGCAAGC+TGG | + | chr7.2:3904835-3904854 | None:intergenic | 45.0% | |
| GAGGAAGGTAAACCATAGCA+AGG | - | chr7.2:3905419-3905438 | MS.gene29351:intron | 45.0% | |
| GATGCTTCTACGATGACTAC+TGG | - | chr7.2:3905567-3905586 | MS.gene29351:intron | 45.0% | |
| GCGGAAAGTCATCTGCTTTA+AGG | - | chr7.2:3905313-3905332 | MS.gene29351:intron | 45.0% | |
| TCAAAGTCGTTTATGGAGGG+CGG | - | chr7.2:3904664-3904683 | MS.gene29351:CDS | 45.0% | |
| TCATAGAAGGAATTTCCGCC+TGG | + | chr7.2:3903504-3903523 | None:intergenic | 45.0% | |
| TCGAATAGGTCATGCATACC+AGG | - | chr7.2:3903483-3903502 | MS.gene29351:CDS | 45.0% | |
| TGAGATTCTTCAGAGACGTG+AGG | + | chr7.2:3903880-3903899 | None:intergenic | 45.0% | |
| TGGTATGCATGACCTATTCG+AGG | + | chr7.2:3903484-3903503 | None:intergenic | 45.0% | |
| TGTCTCCTCGGATTCATATC+AGG | + | chr7.2:3906278-3906297 | None:intergenic | 45.0% | |
| TGTTGAACTTGGCGTACTTG+TGG | - | chr7.2:3904726-3904745 | MS.gene29351:CDS | 45.0% | |
| TTCACCGAGAACAAAGGGAT+GGG | - | chr7.2:3903703-3903722 | MS.gene29351:CDS | 45.0% | |
| TTCATGGACCATACGTCTGA+TGG | - | chr7.2:3903442-3903461 | MS.gene29351:CDS | 45.0% | |
| TTCTTCAGCAGACAGAAGTG+TGG | - | chr7.2:3905992-3906011 | MS.gene29351:CDS | 45.0% | |
| ! | AATGCGGCTTTTCTCTGACT+TGG | + | chr7.2:3905865-3905884 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.2:3904920-3904939 | MS.gene29351:CDS | 45.0% |
| ! | CTTCTGAGAGATAGTAAGGG+TGG | - | chr7.2:3905591-3905610 | MS.gene29351:intron | 45.0% |
| ! | GAAACAATCTAAGCATCGCC+CGG | + | chr7.2:3904340-3904359 | None:intergenic | 45.0% |
| ! | TCACTCCATGTGTCTGAGAT+GGG | + | chr7.2:3903616-3903635 | None:intergenic | 45.0% |
| ! | TGAAAGGATCTTGGTGTGTC+TGG | + | chr7.2:3906394-3906413 | None:intergenic | 45.0% |
| ! | TGCAGAGGTGTATCTAACAG+TGG | - | chr7.2:3905696-3905715 | MS.gene29351:intron | 45.0% |
| ! | TTTGCAGCATCGAATTGCCT+AGG | + | chr7.2:3904364-3904383 | None:intergenic | 45.0% |
| ! | TTTTAGGCGCATCCTTGCTA+TGG | + | chr7.2:3905434-3905453 | None:intergenic | 45.0% |
| !! | AGGTATTGGTAAGGAGAAGG+GGG | - | chr7.2:3904756-3904775 | MS.gene29351:CDS | 45.0% |
| !! | CAAAGTTGGTAGCTGCAATG+AGG | - | chr7.2:3905158-3905177 | MS.gene29351:CDS | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | - | chr7.2:3906244-3906263 | MS.gene29351:CDS | 45.0% |
| !! | GGAAGCTGTAGGTATTGGTA+AGG | - | chr7.2:3904747-3904766 | MS.gene29351:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.2:3904970-3904989 | MS.gene29351:CDS | 45.0% |
| !! | TTTCTAGAGCTCTGTCTCCT+CGG | + | chr7.2:3906290-3906309 | None:intergenic | 45.0% |
| AAAGCTTTGCAAGCTGGTGC+AGG | + | chr7.2:3904829-3904848 | None:intergenic | 50.0% | |
| AACATCTGCTTCTCGGGAAG+TGG | - | chr7.2:3906202-3906221 | MS.gene29351:CDS | 50.0% | |
| AAGTAGAAGATCGGGGCTTG+AGG | + | chr7.2:3905242-3905261 | None:intergenic | 50.0% | |
| CAGGATCTCCATCAGACGTA+TGG | + | chr7.2:3903453-3903472 | None:intergenic | 50.0% | |
| CGAAGATGAGCAAGGCCTAA+AGG | - | chr7.2:3906163-3906182 | MS.gene29351:CDS | 50.0% | |
| CTCTTAGCTTCCACCTTCCT+CGG | + | chr7.2:3905636-3905655 | None:intergenic | 50.0% | |
| GACTCATTCGAAGCGAAAGC+TGG | + | chr7.2:3903540-3903559 | None:intergenic | 50.0% | |
| GGCAAGGACTGAAAGGATCT+TGG | + | chr7.2:3906403-3906422 | None:intergenic | 50.0% | |
| GTTCCATGCCAAGCCTAGTA+AGG | + | chr7.2:3904783-3904802 | None:intergenic | 50.0% | |
| TAGTTCATGTTGCCTCGGTC+CGG | + | chr7.2:3903842-3903861 | None:intergenic | 50.0% | |
| TCACCGAGAACAAAGGGATG+GGG | - | chr7.2:3903704-3903723 | MS.gene29351:CDS | 50.0% | |
| TGATGATTCACCGAGGAAGG+TGG | - | chr7.2:3905623-3905642 | MS.gene29351:intron | 50.0% | |
| TGCTTCTCGGGAAGTGGTTA+AGG | - | chr7.2:3906208-3906227 | MS.gene29351:CDS | 50.0% | |
| TGGTGCCTGAGGTATGTTGA+AGG | + | chr7.2:3906105-3906124 | None:intergenic | 50.0% | |
| TTCCCCCATCCCTTTGTTCT+CGG | + | chr7.2:3903710-3903729 | None:intergenic | 50.0% | |
| ! | AACCAAACTGATGGGTGCAG+AGG | - | chr7.2:3905681-3905700 | MS.gene29351:intron | 50.0% |
| ! | AGCAGACAGAAGTGTGGAAG+AGG | - | chr7.2:3905998-3906017 | MS.gene29351:CDS | 50.0% |
| ! | ATAACCTTTTTGCCGGACCG+AGG | - | chr7.2:3903827-3903846 | MS.gene29351:CDS | 50.0% |
| !! | GATACCAGTTTGGTGCATGG+CGG | - | chr7.2:3905294-3905313 | MS.gene29351:intron | 50.0% |
| AACGCTTGAACGTCCTTCCC+AGG | + | chr7.2:3904805-3904824 | None:intergenic | 55.0% | |
| AAGGGGGACCTTACTAGGCT+TGG | - | chr7.2:3904772-3904791 | MS.gene29351:CDS | 55.0% | |
| ACTAGGCTTGGCATGGAACC+TGG | - | chr7.2:3904784-3904803 | MS.gene29351:CDS | 55.0% | |
| AGGAGAAGGGGGACCTTACT+AGG | - | chr7.2:3904767-3904786 | MS.gene29351:CDS | 55.0% | |
| ATGGCAGCCGAAGATGAGCA+AGG | - | chr7.2:3906155-3906174 | MS.gene29351:CDS | 55.0% | |
| CACCGAGAACAAAGGGATGG+GGG | - | chr7.2:3903705-3903724 | MS.gene29351:CDS | 55.0% | |
| CACCTCTGCACCCATCAGTT+TGG | + | chr7.2:3905686-3905705 | None:intergenic | 55.0% | |
| CGAGGAAGGTGGAAGCTAAG+AGG | - | chr7.2:3905634-3905653 | MS.gene29351:intron | 55.0% | |
| CTAGGCTTGGCATGGAACCT+GGG | - | chr7.2:3904785-3904804 | MS.gene29351:CDS | 55.0% | |
| CTTTCCGCCATGCACCAAAC+TGG | + | chr7.2:3905301-3905320 | None:intergenic | 55.0% | |
| GGACCTTACTAGGCTTGGCA+TGG | - | chr7.2:3904777-3904796 | MS.gene29351:CDS | 55.0% | |
| GGCGTACTTGTGGAAGCTGT+AGG | - | chr7.2:3904736-3904755 | MS.gene29351:CDS | 55.0% | |
| TCAGACTTCGATGGTGCCTG+AGG | + | chr7.2:3906116-3906135 | None:intergenic | 55.0% | |
| TCCTTTCAGTCCTTGCCGCA+AGG | - | chr7.2:3906406-3906425 | MS.gene29351:CDS | 55.0% | |
| AGCTGTTTGGCCTCGCTTGC+TGG | - | chr7.2:3904933-3904952 | MS.gene29351:CDS | 60.0% | |
| CAACCTCTTGCCAGCAAGCG+AGG | + | chr7.2:3904946-3904965 | None:intergenic | 60.0% | |
| CATGTACGAGCCTTGCGGCA+AGG | + | chr7.2:3906419-3906438 | None:intergenic | 60.0% | |
| GCCTTGCGGCAAGGACTGAA+AGG | + | chr7.2:3906410-3906429 | None:intergenic | 60.0% | |
| GCTTGGCATGGAACCTGGGA+AGG | - | chr7.2:3904789-3904808 | MS.gene29351:CDS | 60.0% | |
| GTTGCCTCGGTCCGGCAAAA+AGG | + | chr7.2:3903834-3903853 | None:intergenic | 60.0% | |
| ! | CTCGCTTGCTGGCAAGAGGT+TGG | - | chr7.2:3904944-3904963 | MS.gene29351:CDS | 60.0% |
| ! | TGGCCTCGCTTGCTGGCAAG+AGG | - | chr7.2:3904940-3904959 | MS.gene29351:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 3903409 | 3906439 | 3903409 | ID=MS.gene29351 |
| chr7.2 | mRNA | 3903409 | 3906439 | 3903409 | ID=MS.gene29351.t1;Parent=MS.gene29351 |
| chr7.2 | exon | 3905966 | 3906439 | 3905966 | ID=MS.gene29351.t1.exon1;Parent=MS.gene29351.t1 |
| chr7.2 | CDS | 3905966 | 3906439 | 3905966 | ID=cds.MS.gene29351.t1;Parent=MS.gene29351.t1 |
| chr7.2 | exon | 3903409 | 3905187 | 3903409 | ID=MS.gene29351.t1.exon2;Parent=MS.gene29351.t1 |
| chr7.2 | CDS | 3903409 | 3905187 | 3903409 | ID=cds.MS.gene29351.t1;Parent=MS.gene29351.t1 |
| Gene Sequence |
| Protein sequence |
