Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050891.t1 | XP_024627185.1 | 89.9 | 762 | 56 | 3 | 1 | 750 | 1 | 753 | 0.00E+00 | 1328.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050891.t1 | G7KYL3 | 89.9 | 762 | 56 | 3 | 1 | 750 | 1 | 753 | 0.0e+00 | 1328.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050891 | MS.gene29351 | 0.92034 | 1.45E-87 | -1.69E-46 |
| MS.gene050891 | MS.gene78586 | 0.924045 | 1.19E-89 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29352 | MS.gene050891 | PPI |
| MS.gene050738 | MS.gene050891 | PPI |
| MS.gene063225 | MS.gene050891 | PPI |
| MS.gene050890 | MS.gene050891 | PPI |
| MS.gene050892 | MS.gene050891 | PPI |
| MS.gene050891 | MS.gene072485 | PPI |
| MS.gene29350 | MS.gene050891 | PPI |
| MS.gene65461 | MS.gene050891 | PPI |
| MS.gene78587 | MS.gene050891 | PPI |
| MS.gene050893 | MS.gene050891 | PPI |
| MS.gene29351 | MS.gene050891 | PPI |
| MS.gene050942 | MS.gene050891 | PPI |
| MS.gene072485 | MS.gene050891 | PPI |
| MS.gene050891 | MS.gene78586 | PPI |
| MS.gene78586 | MS.gene050891 | PPI |
| MS.gene78585 | MS.gene050891 | PPI |
| MS.gene050891 | MS.gene050892 | PPI |
| MS.gene072484 | MS.gene050891 | PPI |
| MS.gene67159 | MS.gene050891 | PPI |
| MS.gene050891 | MS.gene072482 | PPI |
| MS.gene050889 | MS.gene050891 | PPI |
| MS.gene053360 | MS.gene050891 | PPI |
| MS.gene072482 | MS.gene050891 | PPI |
| MS.gene054416 | MS.gene050891 | PPI |
| MS.gene072481 | MS.gene050891 | PPI |
| MS.gene072542 | MS.gene050891 | PPI |
| MS.gene78588 | MS.gene050891 | PPI |
| MS.gene072483 | MS.gene050891 | PPI |
| MS.gene78584 | MS.gene050891 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050891.t1 | MTR_7g113270 | 92.126 | 762 | 43 | 3 | 1 | 750 | 1 | 757 | 0.0 | 1377 |
| MS.gene050891.t1 | MTR_7g113220 | 89.895 | 762 | 56 | 3 | 1 | 750 | 1 | 753 | 0.0 | 1342 |
| MS.gene050891.t1 | MTR_1g041895 | 68.758 | 813 | 187 | 11 | 1 | 750 | 1 | 809 | 0.0 | 1033 |
| MS.gene050891.t1 | MTR_7g113280 | 69.353 | 757 | 204 | 9 | 1 | 734 | 1 | 752 | 0.0 | 999 |
| MS.gene050891.t1 | MTR_7g113250 | 76.443 | 433 | 90 | 2 | 13 | 433 | 1 | 433 | 0.0 | 668 |
| MS.gene050891.t1 | MTR_7g113250 | 70.115 | 174 | 51 | 1 | 575 | 747 | 436 | 609 | 9.82e-71 | 243 |
| MS.gene050891.t1 | MTR_7g112390 | 60.390 | 462 | 97 | 7 | 105 | 554 | 1 | 388 | 1.34e-157 | 474 |
| MS.gene050891.t1 | MTR_7g112390 | 62.025 | 237 | 46 | 6 | 524 | 750 | 472 | 674 | 1.61e-71 | 248 |
| MS.gene050891.t1 | MTR_7g108470 | 46.608 | 339 | 163 | 4 | 67 | 389 | 139 | 475 | 3.71e-91 | 306 |
| MS.gene050891.t1 | MTR_3g049350 | 63.415 | 246 | 68 | 4 | 265 | 508 | 3 | 228 | 7.77e-87 | 275 |
| MS.gene050891.t1 | MTR_3g049350 | 64.000 | 75 | 26 | 1 | 575 | 648 | 174 | 248 | 2.19e-21 | 95.1 |
| MS.gene050891.t1 | MTR_4g119630 | 42.234 | 367 | 154 | 8 | 20 | 335 | 38 | 397 | 4.52e-80 | 264 |
| MS.gene050891.t1 | MTR_2g436970 | 39.308 | 318 | 166 | 11 | 13 | 316 | 4 | 308 | 3.97e-58 | 204 |
| MS.gene050891.t1 | MTR_7g113290 | 65.289 | 121 | 35 | 3 | 512 | 625 | 7 | 127 | 1.70e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050891.t1 | AT1G09040 | 35.753 | 744 | 361 | 22 | 50 | 731 | 122 | 810 | 1.21e-103 | 339 |
| MS.gene050891.t1 | AT1G09050 | 35.172 | 725 | 354 | 22 | 71 | 731 | 143 | 815 | 2.12e-97 | 322 |
| MS.gene050891.t1 | AT1G09050 | 35.172 | 725 | 354 | 22 | 71 | 731 | 143 | 815 | 2.12e-97 | 322 |
| MS.gene050891.t1 | AT2G47820 | 42.577 | 357 | 179 | 9 | 56 | 392 | 135 | 485 | 1.45e-78 | 269 |
| MS.gene050891.t1 | AT2G47820 | 42.577 | 357 | 179 | 9 | 56 | 392 | 135 | 485 | 1.45e-78 | 269 |
| MS.gene050891.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 1.01e-76 | 266 |
| MS.gene050891.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 1.01e-76 | 266 |
Find 152 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATTTCAAAGTCGTTTA+TGG | 0.134164 | 7.1:-3100690 | MS.gene050891:intron |
| GCGGAAAGTCATCTGCTTTA+AGG | 0.171768 | 7.1:-3100034 | MS.gene050891:CDS |
| ATCATTATAATTCTGGTTAA+AGG | 0.201090 | 7.1:+3101894 | None:intergenic |
| TGAAAATATCATTATAATTC+TGG | 0.213867 | 7.1:+3101887 | None:intergenic |
| CTTTGCCGACTTCTGTTTAA+TGG | 0.228638 | 7.1:+3099893 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.1:-3099103 | MS.gene050891:CDS |
| CACATTGTTGAGAATTCTTC+AGG | 0.253455 | 7.1:-3099468 | MS.gene050891:CDS |
| CCAAAAGTAATGATCTCTTC+TGG | 0.256574 | 7.1:-3100439 | MS.gene050891:CDS |
| TGTTACCTCCAATGATTATC+TGG | 0.258416 | 7.1:-3100351 | MS.gene050891:CDS |
| TCCAATGCTCTAACTGTTAA+TGG | 0.262771 | 7.1:+3099033 | None:intergenic |
| GTCAATTTCCTCCGTTTAAT+AGG | 0.265888 | 7.1:+3099516 | None:intergenic |
| AGCTGTTTGGCCTCGCTTGC+TGG | 0.271118 | 7.1:-3100414 | MS.gene050891:CDS |
| TTCAATATTTGACAGGATTT+CGG | 0.272657 | 7.1:-3100472 | MS.gene050891:CDS |
| TAGTTGGACCACAAACATTT+TGG | 0.284443 | 7.1:+3099403 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.309396 | 7.1:-3100509 | MS.gene050891:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.1:-3100427 | MS.gene050891:CDS |
| GTTGCCTCGGTCCGGCAAAA+AGG | 0.319814 | 7.1:+3101479 | None:intergenic |
| CCAGAAGAGATCATTACTTT+TGG | 0.323183 | 7.1:+3100439 | None:intergenic |
| ACTTTAGGCACTGAATTAAC+AGG | 0.335113 | 7.1:+3099996 | None:intergenic |
| TGAAAGGATCTTGGTGTGTC+TGG | 0.338299 | 7.1:+3098956 | None:intergenic |
| TCTTTGAGCACGAGAATATT+CGG | 0.365137 | 7.1:+3100224 | None:intergenic |
| CGGAAAGTCATCTGCTTTAA+GGG | 0.369059 | 7.1:-3100033 | MS.gene050891:CDS |
| CATGGTTATTGATACCAGTT+TGG | 0.371834 | 7.1:-3100063 | MS.gene050891:CDS |
| CCTATTCGAGGACTGAATTC+AGG | 0.372601 | 7.1:+3101841 | None:intergenic |
| TGCTTCTCGGGAAGTGGTTA+AGG | 0.374030 | 7.1:-3099139 | MS.gene050891:CDS |
| CTCATTGCAGCTACCAACTT+TGG | 0.379784 | 7.1:+3100190 | None:intergenic |
| TGTCTCCTCGGATTCATATC+AGG | 0.382635 | 7.1:+3099072 | None:intergenic |
| AATGAGGAAGAGCCAGAAAA+TGG | 0.392377 | 7.1:-3100173 | MS.gene050891:CDS |
| TAAAGATCATATCAAATTCA+TGG | 0.393568 | 7.1:-3100081 | MS.gene050891:CDS |
| CACCTCTGCACCCATCAGTT+TGG | 0.395218 | 7.1:+3099664 | None:intergenic |
| GAGAATTCTTCAGGATGTTT+AGG | 0.396514 | 7.1:-3099459 | MS.gene050891:CDS |
| ACTAGGCTTGGCATGGAACC+TGG | 0.407506 | 7.1:-3100563 | MS.gene050891:CDS |
| CATGTCTAACATCTGCTTCT+CGG | 0.417095 | 7.1:-3099152 | MS.gene050891:CDS |
| TGGTCTTCTGAGAGATAGTA+AGG | 0.418389 | 7.1:-3099760 | MS.gene050891:CDS |
| CTCTTAGCTTCCACCTTCCT+CGG | 0.419232 | 7.1:+3099714 | None:intergenic |
| AAAGGGAGAAAATGTATGAT+AGG | 0.419409 | 7.1:-3101508 | MS.gene050891:CDS |
| TCATTCTGCTGATGACTAGT+TGG | 0.422211 | 7.1:+3099387 | None:intergenic |
| CTTTAGGCCTTGCTCATCTT+CGG | 0.428940 | 7.1:+3099185 | None:intergenic |
| CAAAAGTAATGATCTCTTCT+GGG | 0.437354 | 7.1:-3100438 | MS.gene050891:CDS |
| TCTGATTTCACAATCATAGA+AGG | 0.440778 | 7.1:+3101796 | None:intergenic |
| GAAGCATCTTCTAATTCAAC+TGG | 0.445905 | 7.1:+3099795 | None:intergenic |
| CTTTCCGCCATGCACCAAAC+TGG | 0.447484 | 7.1:+3100049 | None:intergenic |
| ATGCAGCTGTTCCTATTAAA+CGG | 0.448083 | 7.1:-3099527 | MS.gene050891:CDS |
| CAGGATGTTTAGGCTTCTCT+CGG | 0.448262 | 7.1:-3099449 | MS.gene050891:CDS |
| ATGTCTAACATCTGCTTCTC+GGG | 0.448570 | 7.1:-3099151 | MS.gene050891:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.1:+3100368 | None:intergenic |
| TTTACTGTAAGTAGAAGATC+GGG | 0.451792 | 7.1:+3100100 | None:intergenic |
| CCTGAATTCAGTCCTCGAAT+AGG | 0.459730 | 7.1:-3101841 | MS.gene050891:CDS |
| GAGATAATTCAATATTTGAC+AGG | 0.461702 | 7.1:-3100479 | MS.gene050891:CDS |
| AAACTGATGGATATCTTAGA+TGG | 0.462004 | 7.1:-3101549 | MS.gene050891:CDS |
| ATCTTAGATGGTCGAAGTGC+AGG | 0.466134 | 7.1:-3101537 | MS.gene050891:CDS |
| CTCGCTTGCTGGCAAGAGGT+TGG | 0.466892 | 7.1:-3100403 | MS.gene050891:CDS |
| TTGAGAATCCCTTGTGATGT+TGG | 0.468399 | 7.1:-3099111 | MS.gene050891:CDS |
| GTAGGTATTGGTAAGGAGAA+GGG | 0.470337 | 7.1:-3100593 | MS.gene050891:CDS |
| AGCAGACAGAAGTGTGGAAG+AGG | 0.472115 | 7.1:-3099349 | MS.gene050891:CDS |
| AACAATTCACCGAGAACAAA+GGG | 0.476097 | 7.1:-3101612 | MS.gene050891:CDS |
| GATGCAAACCAAAATGTTTG+TGG | 0.482630 | 7.1:-3099411 | MS.gene050891:CDS |
| CTTGTGGAAGCTGTAGGTAT+TGG | 0.483654 | 7.1:-3100605 | MS.gene050891:CDS |
| TAGTTCATGTTGCCTCGGTC+CGG | 0.493742 | 7.1:+3101471 | None:intergenic |
| GACTCATTTGAAGCGAAAGC+TGG | 0.494012 | 7.1:+3101773 | None:intergenic |
| AAAGCTTTGCAAGCTGGTGC+AGG | 0.494056 | 7.1:+3100521 | None:intergenic |
| AACGCTTGAACGTCCTTCCC+AGG | 0.495754 | 7.1:+3100545 | None:intergenic |
| TTTCTAGAGCTCTGTCTCCT+CGG | 0.499320 | 7.1:+3099060 | None:intergenic |
| GAAGACAAAGCTTTGCAAGC+TGG | 0.500111 | 7.1:+3100515 | None:intergenic |
| CCAACATCTACCTCCACTTT+AGG | 0.500316 | 7.1:+3099981 | None:intergenic |
| GTTCCATGCCAAGCCTAGTA+AGG | 0.502669 | 7.1:+3100567 | None:intergenic |
| GGCAAGGACTGAAAGGATCT+TGG | 0.502833 | 7.1:+3098947 | None:intergenic |
| AACATCTGCTTCTCGGGAAG+TGG | 0.504803 | 7.1:-3099145 | MS.gene050891:CDS |
| CGAAGATGAGCAAGGCCTAA+AGG | 0.505503 | 7.1:-3099184 | MS.gene050891:CDS |
| CTTTACTGTAAGTAGAAGAT+CGG | 0.506445 | 7.1:+3100099 | None:intergenic |
| ACCATTAACAGTTAGAGCAT+TGG | 0.508438 | 7.1:-3099034 | MS.gene050891:CDS |
| AATTGATGATTCACCGAGGA+AGG | 0.510840 | 7.1:-3099727 | MS.gene050891:CDS |
| ATCACTCCATGTGTCTGAGA+TGG | 0.517171 | 7.1:+3101696 | None:intergenic |
| TTCATGGACCATACGTCTGA+TGG | 0.518088 | 7.1:-3101868 | MS.gene050891:CDS |
| TCGAATAGGTCATGCATACC+AGG | 0.522827 | 7.1:-3101827 | MS.gene050891:CDS |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.1:+3100317 | None:intergenic |
| CAACCTCTTGCCAGCAAGCG+AGG | 0.527263 | 7.1:+3100404 | None:intergenic |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.1:-3100299 | MS.gene050891:CDS |
| ATTGATACCAGTTTGGTGCA+TGG | 0.532780 | 7.1:-3100056 | MS.gene050891:CDS |
| TTGAAGTCTACTGTTGAACT+TGG | 0.533877 | 7.1:-3100632 | MS.gene050891:CDS |
| GAAGAAGAAGAAGCCAAAGT+TGG | 0.537968 | 7.1:-3100203 | MS.gene050891:CDS |
| TCCTTTCAGTCCTTGCCGCA+AGG | 0.543859 | 7.1:-3098941 | MS.gene050891:CDS |
| TGTAGGTATTGGTAAGGAGA+AGG | 0.546396 | 7.1:-3100594 | MS.gene050891:CDS |
| TGTTAATTCAGTGCCTAAAG+TGG | 0.547470 | 7.1:-3099994 | MS.gene050891:CDS |
| TGAACATCTTCTGAATCAGC+AGG | 0.549114 | 7.1:+3101751 | None:intergenic |
| CTAGGCTTGGCATGGAACCT+GGG | 0.550586 | 7.1:-3100562 | MS.gene050891:CDS |
| GCTTGGCATGGAACCTGGGA+AGG | 0.551229 | 7.1:-3100558 | MS.gene050891:CDS |
| TTTCACCTTCAACATACCTC+AGG | 0.551354 | 7.1:-3099250 | MS.gene050891:CDS |
| TTCAATCAGAGAGTTAGATC+AGG | 0.551942 | 7.1:-3099561 | MS.gene050891:CDS |
| TGTTGAACTTGGCGTACTTG+TGG | 0.555243 | 7.1:-3100621 | MS.gene050891:CDS |
| CGAGGAAGGTGGAAGCTAAG+AGG | 0.555775 | 7.1:-3099713 | MS.gene050891:CDS |
| TGGCCTCGCTTGCTGGCAAG+AGG | 0.555857 | 7.1:-3100407 | MS.gene050891:CDS |
| GACAATAGTTCATGTTGCCT+CGG | 0.558165 | 7.1:+3101466 | None:intergenic |
| TCACTCCATGTGTCTGAGAT+GGG | 0.562681 | 7.1:+3101697 | None:intergenic |
| TTCACCGAGAACAAAGGGAT+GGG | 0.565277 | 7.1:-3101607 | MS.gene050891:CDS |
| GCCTTGCGGCAAGGACTGAA+AGG | 0.566399 | 7.1:+3098940 | None:intergenic |
| TAGGTATTGGTAAGGAGAAG+GGG | 0.566837 | 7.1:-3100592 | MS.gene050891:CDS |
| GGAAGCTGTAGGTATTGGTA+AGG | 0.569902 | 7.1:-3100600 | MS.gene050891:CDS |
| TGGTATGCATGACCTATTCG+AGG | 0.570623 | 7.1:+3101829 | None:intergenic |
| AAAATATCAACCAAACTGAT+GGG | 0.570703 | 7.1:-3099674 | MS.gene050891:CDS |
| TCACCGAGAACAAAGGGATG+GGG | 0.571170 | 7.1:-3101606 | MS.gene050891:CDS |
| GATGCTTCTACGATGACTAC+TGG | 0.571992 | 7.1:-3099780 | MS.gene050891:CDS |
| CATGTACGAGCCTTGCGGCA+AGG | 0.572654 | 7.1:+3098931 | None:intergenic |
| GGACCTTACTAGGCTTGGCA+TGG | 0.573430 | 7.1:-3100570 | MS.gene050891:CDS |
| CGAGAAGCAGATGTTAGACA+TGG | 0.576793 | 7.1:+3099153 | None:intergenic |
| CAGGATCTCCATCAGACGTA+TGG | 0.578249 | 7.1:+3101860 | None:intergenic |
| TGCCGCAAGGCTCGTACATG+AGG | 0.578280 | 7.1:-3098928 | None:intergenic |
| ATTTCAAAGTCGTTTATGGA+GGG | 0.578872 | 7.1:-3100686 | MS.gene050891:CDS |
| CACTAACAGAATCAAAGTAA+TGG | 0.579542 | 7.1:+3100273 | None:intergenic |
| TAAAACCATTAAACAGAAGT+CGG | 0.581290 | 7.1:-3099898 | MS.gene050891:CDS |
| AAATATTGAATTATCTCACT+AGG | 0.581479 | 7.1:+3100485 | None:intergenic |
| GATTTCAAAGTCGTTTATGG+AGG | 0.583379 | 7.1:-3100687 | MS.gene050891:CDS |
| TGATGATTCACCGAGGAAGG+TGG | 0.590215 | 7.1:-3099724 | MS.gene050891:CDS |
| GATACCAATAGACTTTCTGA+AGG | 0.590512 | 7.1:-3099858 | MS.gene050891:CDS |
| AAATAGCAAAACAGTAGCAA+TGG | 0.591008 | 7.1:-3099211 | MS.gene050891:CDS |
| TCATAGAAGGAATTTCTGCC+TGG | 0.593937 | 7.1:+3101809 | None:intergenic |
| AAGTAGAAGATCGGGGCTTG+AGG | 0.596284 | 7.1:+3100108 | None:intergenic |
| AAACAATTCACCGAGAACAA+AGG | 0.596800 | 7.1:-3101613 | MS.gene050891:CDS |
| ATGGCAGCCGAAGATGAGCA+AGG | 0.597264 | 7.1:-3099192 | MS.gene050891:CDS |
| GATGGGTAAATCAATTGCAA+AGG | 0.601126 | 7.1:+3101714 | None:intergenic |
| ATGCTCTAACTGTTAATGGT+CGG | 0.603464 | 7.1:+3099037 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.604418 | 7.1:+3099102 | None:intergenic |
| CACCGAGAACAAAGGGATGG+GGG | 0.606182 | 7.1:-3101605 | MS.gene050891:CDS |
| ATTCACCGAGAACAAAGGGA+TGG | 0.612425 | 7.1:-3101608 | MS.gene050891:CDS |
| TCAAAGTCGTTTATGGAGGG+CGG | 0.617461 | 7.1:-3100683 | MS.gene050891:CDS |
| TGGTGCCTGAGGTATGTTGA+AGG | 0.618245 | 7.1:+3099245 | None:intergenic |
| AGGGCTTAAATATACGAGGA+AGG | 0.621529 | 7.1:-3099943 | MS.gene050891:CDS |
| TGCCTCATGTACGAGCCTTG+CGG | 0.621550 | 7.1:+3098926 | None:intergenic |
| TCAGACTTCGATGGTGCCTG+AGG | 0.621736 | 7.1:+3099234 | None:intergenic |
| AACCAAACTGATGGGTGCAG+AGG | 0.625427 | 7.1:-3099666 | MS.gene050891:CDS |
| ATTTACCCATCTCAGACACA+TGG | 0.629487 | 7.1:-3101702 | MS.gene050891:CDS |
| ACATCACAAGGGATTCTCAA+AGG | 0.640112 | 7.1:+3099114 | None:intergenic |
| GAGGAAGGTAAACCATAGCA+AGG | 0.643269 | 7.1:-3099928 | MS.gene050891:CDS |
| CAAAGTTGGTAGCTGCAATG+AGG | 0.643587 | 7.1:-3100189 | MS.gene050891:CDS |
| TAATTCAGTGCCTAAAGTGG+AGG | 0.644027 | 7.1:-3099991 | MS.gene050891:CDS |
| GGTCTTCTGAGAGATAGTAA+GGG | 0.645473 | 7.1:-3099759 | MS.gene050891:CDS |
| CTGAAGAATTCTCAACAATG+TGG | 0.647526 | 7.1:+3099469 | None:intergenic |
| CTTCTGAGAGATAGTAAGGG+TGG | 0.653143 | 7.1:-3099756 | MS.gene050891:CDS |
| GGCGTACTTGTGGAAGCTGT+AGG | 0.654942 | 7.1:-3100611 | MS.gene050891:CDS |
| CCTAAAGTGGAGGTAGATGT+TGG | 0.657169 | 7.1:-3099981 | MS.gene050891:CDS |
| AACAGCCTGATATGAATCCG+AGG | 0.663816 | 7.1:-3099077 | MS.gene050891:CDS |
| TTCTTCAGCAGACAGAAGTG+TGG | 0.665376 | 7.1:-3099355 | MS.gene050891:CDS |
| GATACCAGTTTGGTGCATGG+CGG | 0.678268 | 7.1:-3100053 | MS.gene050891:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.1:-3100377 | MS.gene050891:CDS |
| AGGTATTGGTAAGGAGAAGG+GGG | 0.711130 | 7.1:-3100591 | MS.gene050891:CDS |
| CAGCTGTTCCTATTAAACGG+AGG | 0.715033 | 7.1:-3099524 | MS.gene050891:CDS |
| TGCAGAGGTGTATCTAACAG+TGG | 0.716698 | 7.1:-3099651 | MS.gene050891:CDS |
| ATAAAGGGCTTAAATATACG+AGG | 0.718352 | 7.1:-3099947 | MS.gene050891:CDS |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.1:+3099103 | None:intergenic |
| TTACTGTAAGTAGAAGATCG+GGG | 0.727493 | 7.1:+3100101 | None:intergenic |
| TTGATAATAATCAATTGACG+AGG | 0.738361 | 7.1:-3099599 | MS.gene050891:CDS |
| CTTCAATTGATGATTCACCG+AGG | 0.774642 | 7.1:-3099731 | MS.gene050891:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAATATCATTATAATTC+TGG | + | chr7.1:3098947-3098966 | None:intergenic | 15.0% |
| !! | TTGGTTGTAAAAAATATAAA+GGG | - | chr7.1:3100869-3100888 | MS.gene050891:intron | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.1:3098947-3098966 | MS.gene050891:CDS | 15.0% |
| !! | AAATATTGAATTATCTCACT+AGG | + | chr7.1:3100349-3100368 | None:intergenic | 20.0% |
| !! | CATAGAACTTCAAATAATTA+TGG | + | chr7.1:3100031-3100050 | None:intergenic | 20.0% |
| !! | GTTAATAAATCTGCAAAATA+TGG | + | chr7.1:3099766-3099785 | None:intergenic | 20.0% |
| !! | GTTGGTTGTAAAAAATATAA+AGG | - | chr7.1:3100868-3100887 | MS.gene050891:intron | 20.0% |
| !! | TAAAGATCATATCAAATTCA+TGG | - | chr7.1:3100750-3100769 | MS.gene050891:intron | 20.0% |
| !!! | AAGGCTATATTTAAAATTAC+AGG | + | chr7.1:3099638-3099657 | None:intergenic | 20.0% |
| !!! | ATCATTATAATTCTGGTTAA+AGG | + | chr7.1:3098940-3098959 | None:intergenic | 20.0% |
| !!! | GAAATACTTTCATTTTACTA+TGG | - | chr7.1:3099248-3099267 | MS.gene050891:CDS | 20.0% |
| ! | AAAAATATCAACCAAACTGA+TGG | - | chr7.1:3101156-3101175 | MS.gene050891:intron | 25.0% |
| ! | AAAATATCAACCAAACTGAT+GGG | - | chr7.1:3101157-3101176 | MS.gene050891:intron | 25.0% |
| ! | AAGAAAAACCAGATAATCAT+TGG | + | chr7.1:3100491-3100510 | None:intergenic | 25.0% |
| ! | AATAAAAGTCACTAGGAATA+AGG | - | chr7.1:3099796-3099815 | MS.gene050891:CDS | 25.0% |
| ! | ATAAAAGTCACTAGGAATAA+GGG | - | chr7.1:3099797-3099816 | MS.gene050891:CDS | 25.0% |
| ! | ATGCAATTCATTAACAATAG+AGG | + | chr7.1:3099470-3099489 | None:intergenic | 25.0% |
| ! | GAGATAATTCAATATTTGAC+AGG | - | chr7.1:3100352-3100371 | MS.gene050891:CDS | 25.0% |
| ! | GTAAAAGAATAAAAGTCACT+AGG | - | chr7.1:3099789-3099808 | MS.gene050891:CDS | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | + | chr7.1:3100121-3100140 | None:intergenic | 25.0% |
| ! | TAAAACCATTAAACAGAAGT+CGG | - | chr7.1:3100933-3100952 | MS.gene050891:intron | 25.0% |
| ! | TAGTTACAATGTAATTACGA+TGG | - | chr7.1:3099970-3099989 | MS.gene050891:CDS | 25.0% |
| ! | TGGAGTGATTTAAAGAAAAA+GGG | + | chr7.1:3100066-3100085 | None:intergenic | 25.0% |
| ! | TTCAATATTTGACAGGATTT+CGG | - | chr7.1:3100359-3100378 | MS.gene050891:CDS | 25.0% |
| ! | TTGGAGTGATTTAAAGAAAA+AGG | + | chr7.1:3100067-3100086 | None:intergenic | 25.0% |
| !! | ATTATCATGTGTCTTTTTAC+TGG | + | chr7.1:3101211-3101230 | None:intergenic | 25.0% |
| !! | ATTTTGCTTTAACAGTAATC+TGG | - | chr7.1:3099704-3099723 | MS.gene050891:CDS | 25.0% |
| !! | GTGACTTTTATTCTTTTACA+TGG | + | chr7.1:3099788-3099807 | None:intergenic | 25.0% |
| !! | TTGATAATAATCAATTGACG+AGG | - | chr7.1:3101232-3101251 | MS.gene050891:intron | 25.0% |
| !!! | GATACAAATAGTTTTGTACT+AGG | - | chr7.1:3099161-3099180 | MS.gene050891:CDS | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+CGG | - | chr7.1:3099176-3099195 | MS.gene050891:CDS | 25.0% |
| !!! | TACTAGGTTTGTTTATTTTC+GGG | - | chr7.1:3099177-3099196 | MS.gene050891:CDS | 25.0% |
| AAAAACCAGATAATCATTGG+AGG | + | chr7.1:3100488-3100507 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+AGG | - | chr7.1:3099323-3099342 | MS.gene050891:CDS | 30.0% | |
| AAATAGCAAAACAGTAGCAA+TGG | - | chr7.1:3101620-3101639 | MS.gene050891:CDS | 30.0% | |
| AATATTATCACACTTCGAGA+AGG | + | chr7.1:3099670-3099689 | None:intergenic | 30.0% | |
| ACAGATTTCAAAGTCGTTTA+TGG | - | chr7.1:3100141-3100160 | MS.gene050891:CDS | 30.0% | |
| ACCACTAAATGTGATCATAT+AGG | + | chr7.1:3099527-3099546 | None:intergenic | 30.0% | |
| ACTAGCAAAGAAATTCACAT+TGG | + | chr7.1:3099596-3099615 | None:intergenic | 30.0% | |
| ATAAAGGGCTTAAATATACG+AGG | - | chr7.1:3100884-3100903 | MS.gene050891:intron | 30.0% | |
| ATTTCAAAGTCGTTTATGGA+GGG | - | chr7.1:3100145-3100164 | MS.gene050891:CDS | 30.0% | |
| CAAAAGTAATGATCTCTTCT+GGG | - | chr7.1:3100393-3100412 | MS.gene050891:CDS | 30.0% | |
| CAAATAATTATGGTATGTCG+CGG | + | chr7.1:3100021-3100040 | None:intergenic | 30.0% | |
| CACTAACAGAATCAAAGTAA+TGG | + | chr7.1:3100561-3100580 | None:intergenic | 30.0% | |
| CTTTACTGTAAGTAGAAGAT+CGG | + | chr7.1:3100735-3100754 | None:intergenic | 30.0% | |
| TAAGGGACTAAATTATCTGT+TGG | - | chr7.1:3099814-3099833 | MS.gene050891:CDS | 30.0% | |
| TCTGATTTCACAATCATAGA+AGG | + | chr7.1:3099038-3099057 | None:intergenic | 30.0% | |
| TTTACTGTAAGTAGAAGATC+GGG | + | chr7.1:3100734-3100753 | None:intergenic | 30.0% | |
| ! | AAACTGATGGATATCTTAGA+TGG | - | chr7.1:3099282-3099301 | MS.gene050891:CDS | 30.0% |
| ! | GACTTCTGTTTAATGGTTTT+AGG | + | chr7.1:3100934-3100953 | None:intergenic | 30.0% |
| ! | GATTTAAAGAAAAAGGGTAC+TGG | + | chr7.1:3100060-3100079 | None:intergenic | 30.0% |
| ! | GGAAAGTTTTACAAAACTGA+TGG | - | chr7.1:3099269-3099288 | MS.gene050891:CDS | 30.0% |
| ! | TAACAGTAATCTGGTTTATG+TGG | - | chr7.1:3099713-3099732 | MS.gene050891:CDS | 30.0% |
| ! | TCTTCATTTGATCCATTTTC+TGG | + | chr7.1:3100673-3100692 | None:intergenic | 30.0% |
| ! | TCTTTCTTTTTCTGTCTCTT+TGG | + | chr7.1:3101852-3101871 | None:intergenic | 30.0% |
| ! | TTTTCCTTCAGAAAGTCTAT+TGG | + | chr7.1:3100980-3100999 | None:intergenic | 30.0% |
| !! | TGCATTTTATTTATGAGCTC+CGG | - | chr7.1:3099840-3099859 | MS.gene050891:CDS | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+TGG | - | chr7.1:3100496-3100515 | MS.gene050891:CDS | 30.0% |
| AAACAATTCACCGAGAACAA+AGG | - | chr7.1:3099218-3099237 | MS.gene050891:CDS | 35.0% | |
| AACAATTCACCGAGAACAAA+GGG | - | chr7.1:3099219-3099238 | MS.gene050891:CDS | 35.0% | |
| ACCATTAACAGTTAGAGCAT+TGG | - | chr7.1:3101797-3101816 | MS.gene050891:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+CGG | - | chr7.1:3101304-3101323 | MS.gene050891:intron | 35.0% | |
| ATGCTCTAACTGTTAATGGT+CGG | + | chr7.1:3101797-3101816 | None:intergenic | 35.0% | |
| ATTCCATTTGTCTGACAGAT+TGG | - | chr7.1:3099496-3099515 | MS.gene050891:CDS | 35.0% | |
| CACATTGTTGAGAATTCTTC+AGG | - | chr7.1:3101363-3101382 | MS.gene050891:intron | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.1:3100768-3100787 | MS.gene050891:intron | 35.0% | |
| CCAAAAGTAATGATCTCTTC+TGG | - | chr7.1:3100392-3100411 | MS.gene050891:CDS | 35.0% | |
| CGGTAAAATGATAATTCGCT+CGG | + | chr7.1:3100001-3100020 | None:intergenic | 35.0% | |
| CTGAAGAATTCTCAACAATG+TGG | + | chr7.1:3101365-3101384 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGGATGTTT+AGG | - | chr7.1:3101372-3101391 | MS.gene050891:intron | 35.0% | |
| GATACCAATAGACTTTCTGA+AGG | - | chr7.1:3100973-3100992 | MS.gene050891:intron | 35.0% | |
| GATGCAAACCAAAATGTTTG+TGG | - | chr7.1:3101420-3101439 | MS.gene050891:intron | 35.0% | |
| GATGGGTAAATCAATTGCAA+AGG | + | chr7.1:3099120-3099139 | None:intergenic | 35.0% | |
| GATTTCAAAGTCGTTTATGG+AGG | - | chr7.1:3100144-3100163 | MS.gene050891:CDS | 35.0% | |
| GCCTATATGATCACATTTAG+TGG | - | chr7.1:3099523-3099542 | MS.gene050891:CDS | 35.0% | |
| GTCAATTTCCTCCGTTTAAT+AGG | + | chr7.1:3101318-3101337 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.1:3100532-3100551 | MS.gene050891:CDS | 35.0% | |
| TCCAATGCTCTAACTGTTAA+TGG | + | chr7.1:3101801-3101820 | None:intergenic | 35.0% | |
| TCTTTGAGCACGAGAATATT+CGG | + | chr7.1:3100610-3100629 | None:intergenic | 35.0% | |
| TGTTAATTCAGTGCCTAAAG+TGG | - | chr7.1:3100837-3100856 | MS.gene050891:intron | 35.0% | |
| TGTTACCTCCAATGATTATC+TGG | - | chr7.1:3100480-3100499 | MS.gene050891:CDS | 35.0% | |
| TTACTGTAAGTAGAAGATCG+GGG | + | chr7.1:3100733-3100752 | None:intergenic | 35.0% | |
| TTCAATCAGAGAGTTAGATC+AGG | - | chr7.1:3101270-3101289 | MS.gene050891:intron | 35.0% | |
| TTCGAGAAGGAAGTTAAAGA+AGG | + | chr7.1:3099657-3099676 | None:intergenic | 35.0% | |
| TTGAAGTCTACTGTTGAACT+TGG | - | chr7.1:3100199-3100218 | MS.gene050891:CDS | 35.0% | |
| ! | ATAGGACATAACCTTTTTGC+CGG | - | chr7.1:3099341-3099360 | MS.gene050891:CDS | 35.0% |
| ! | ATGCTTAGATTGTTTCTCCT+AGG | - | chr7.1:3099866-3099885 | MS.gene050891:CDS | 35.0% |
| ! | CCAGAAGAGATCATTACTTT+TGG | + | chr7.1:3100395-3100414 | None:intergenic | 35.0% |
| ! | CTGAAAGCTTCACTAGTTTA+TGG | - | chr7.1:3099906-3099925 | MS.gene050891:CDS | 35.0% |
| ! | GAAGCATCTTCTAATTCAAC+TGG | + | chr7.1:3101039-3101058 | None:intergenic | 35.0% |
| ! | TAGTTGGACCACAAACATTT+TGG | + | chr7.1:3101431-3101450 | None:intergenic | 35.0% |
| !! | AAAGAAAAAGGGTACTGGTA+TGG | + | chr7.1:3100055-3100074 | None:intergenic | 35.0% |
| !! | ACTTTAGGCACTGAATTAAC+AGG | + | chr7.1:3100838-3100857 | None:intergenic | 35.0% |
| !! | GCATTTTATTTATGAGCTCC+GGG | - | chr7.1:3099841-3099860 | MS.gene050891:CDS | 35.0% |
| !!! | TTGCTATTTTCAGACTTCGA+TGG | + | chr7.1:3101609-3101628 | None:intergenic | 35.0% |
| AAGCCAATCTGTCAGACAAA+TGG | + | chr7.1:3099502-3099521 | None:intergenic | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+TGG | - | chr7.1:3100658-3100677 | MS.gene050891:CDS | 40.0% | |
| ACATCACAAGGGATTCTCAA+AGG | + | chr7.1:3101720-3101739 | None:intergenic | 40.0% | |
| AGGGCTTAAATATACGAGGA+AGG | - | chr7.1:3100888-3100907 | MS.gene050891:intron | 40.0% | |
| ATGTCTAACATCTGCTTCTC+GGG | - | chr7.1:3101680-3101699 | MS.gene050891:CDS | 40.0% | |
| ATTTACCCATCTCAGACACA+TGG | - | chr7.1:3099129-3099148 | MS.gene050891:CDS | 40.0% | |
| CATGTCTAACATCTGCTTCT+CGG | - | chr7.1:3101679-3101698 | MS.gene050891:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | + | chr7.1:3101731-3101750 | None:intergenic | 40.0% | |
| CGAAGTGCAGGAAGAAAAAA+GGG | - | chr7.1:3099306-3099325 | MS.gene050891:CDS | 40.0% | |
| CGGAAAGTCATCTGCTTTAA+GGG | - | chr7.1:3100798-3100817 | MS.gene050891:intron | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | + | chr7.1:3100517-3100536 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGCCAAAGT+TGG | - | chr7.1:3100628-3100647 | MS.gene050891:CDS | 40.0% | |
| GACAATAGTTCATGTTGCCT+CGG | + | chr7.1:3099368-3099387 | None:intergenic | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.1:3100466-3100485 | None:intergenic | 40.0% | |
| TAATTCAGTGCCTAAAGTGG+AGG | - | chr7.1:3100840-3100859 | MS.gene050891:intron | 40.0% | |
| TCATAGAAGGAATTTCTGCC+TGG | + | chr7.1:3099025-3099044 | None:intergenic | 40.0% | |
| TCATTCTGCTGATGACTAGT+TGG | + | chr7.1:3101447-3101466 | None:intergenic | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | + | chr7.1:3101732-3101751 | None:intergenic | 40.0% | |
| TCGAAGTGCAGGAAGAAAAA+AGG | - | chr7.1:3099305-3099324 | MS.gene050891:CDS | 40.0% | |
| TGAACATCTTCTGAATCAGC+AGG | + | chr7.1:3099083-3099102 | None:intergenic | 40.0% | |
| TTGAGAATCCCTTGTGATGT+TGG | - | chr7.1:3101720-3101739 | MS.gene050891:CDS | 40.0% | |
| TTTCACCTTCAACATACCTC+AGG | - | chr7.1:3101581-3101600 | MS.gene050891:CDS | 40.0% | |
| ! | AATGTGGCTTTTCTCTGACT+TGG | + | chr7.1:3101349-3101368 | None:intergenic | 40.0% |
| ! | AATTGATGATTCACCGAGGA+AGG | - | chr7.1:3101104-3101123 | MS.gene050891:intron | 40.0% |
| ! | CTTCAATTGATGATTCACCG+AGG | - | chr7.1:3101100-3101119 | MS.gene050891:intron | 40.0% |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr7.1:3101665-3101684 | None:intergenic | 40.0% |
| ! | GGTCTTCTGAGAGATAGTAA+GGG | - | chr7.1:3101072-3101091 | MS.gene050891:intron | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.1:3100322-3100341 | MS.gene050891:CDS | 40.0% |
| ! | TGGTCTTCTGAGAGATAGTA+AGG | - | chr7.1:3101071-3101090 | MS.gene050891:intron | 40.0% |
| !! | ATTGATACCAGTTTGGTGCA+TGG | - | chr7.1:3100775-3100794 | MS.gene050891:intron | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | - | chr7.1:3100515-3100534 | MS.gene050891:CDS | 40.0% |
| !! | CTTTGCCGACTTCTGTTTAA+TGG | + | chr7.1:3100941-3100960 | None:intergenic | 40.0% |
| !! | GTAGGTATTGGTAAGGAGAA+GGG | - | chr7.1:3100238-3100257 | MS.gene050891:CDS | 40.0% |
| !! | TAGGTATTGGTAAGGAGAAG+GGG | - | chr7.1:3100239-3100258 | MS.gene050891:CDS | 40.0% |
| !! | TGTAGGTATTGGTAAGGAGA+AGG | - | chr7.1:3100237-3100256 | MS.gene050891:CDS | 40.0% |
| AACAGCCTGATATGAATCCG+AGG | - | chr7.1:3101754-3101773 | MS.gene050891:CDS | 45.0% | |
| ATCACTCCATGTGTCTGAGA+TGG | + | chr7.1:3099138-3099157 | None:intergenic | 45.0% | |
| ATCTCAAGATGCTCTGTCAC+AGG | - | chr7.1:3099415-3099434 | MS.gene050891:CDS | 45.0% | |
| ATCTTAGATGGTCGAAGTGC+AGG | - | chr7.1:3099294-3099313 | MS.gene050891:CDS | 45.0% | |
| ATTCACCGAGAACAAAGGGA+TGG | - | chr7.1:3099223-3099242 | MS.gene050891:CDS | 45.0% | |
| CAGCTGTTCCTATTAAACGG+AGG | - | chr7.1:3101307-3101326 | MS.gene050891:intron | 45.0% | |
| CAGGATGTTTAGGCTTCTCT+CGG | - | chr7.1:3101382-3101401 | MS.gene050891:intron | 45.0% | |
| CCAACATCTACCTCCACTTT+AGG | + | chr7.1:3100853-3100872 | None:intergenic | 45.0% | |
| CCTAAAGTGGAGGTAGATGT+TGG | - | chr7.1:3100850-3100869 | MS.gene050891:intron | 45.0% | |
| CCTATTCGAGGACTGAATTC+AGG | + | chr7.1:3098993-3099012 | None:intergenic | 45.0% | |
| CCTGAATTCAGTCCTCGAAT+AGG | - | chr7.1:3098990-3099009 | MS.gene050891:CDS | 45.0% | |
| CGAGAAGCAGATGTTAGACA+TGG | + | chr7.1:3101681-3101700 | None:intergenic | 45.0% | |
| CTCATTGCAGCTACCAACTT+TGG | + | chr7.1:3100644-3100663 | None:intergenic | 45.0% | |
| CTTGTGGAAGCTGTAGGTAT+TGG | - | chr7.1:3100226-3100245 | MS.gene050891:CDS | 45.0% | |
| CTTTAGGCCTTGCTCATCTT+CGG | + | chr7.1:3101649-3101668 | None:intergenic | 45.0% | |
| GAAGACAAAGCTTTGCAAGC+TGG | + | chr7.1:3100319-3100338 | None:intergenic | 45.0% | |
| GAGGAAGGTAAACCATAGCA+AGG | - | chr7.1:3100903-3100922 | MS.gene050891:intron | 45.0% | |
| GATGCTTCTACGATGACTAC+TGG | - | chr7.1:3101051-3101070 | MS.gene050891:intron | 45.0% | |
| GCGGAAAGTCATCTGCTTTA+AGG | - | chr7.1:3100797-3100816 | MS.gene050891:intron | 45.0% | |
| TCAAAGTCGTTTATGGAGGG+CGG | - | chr7.1:3100148-3100167 | MS.gene050891:CDS | 45.0% | |
| TCGAATAGGTCATGCATACC+AGG | - | chr7.1:3099004-3099023 | MS.gene050891:CDS | 45.0% | |
| TGAGATTCTTCAGAGACGTG+AGG | + | chr7.1:3099401-3099420 | None:intergenic | 45.0% | |
| TGGTATGCATGACCTATTCG+AGG | + | chr7.1:3099005-3099024 | None:intergenic | 45.0% | |
| TGTCTCCTCGGATTCATATC+AGG | + | chr7.1:3101762-3101781 | None:intergenic | 45.0% | |
| TGTTGAACTTGGCGTACTTG+TGG | - | chr7.1:3100210-3100229 | MS.gene050891:CDS | 45.0% | |
| TTCACCGAGAACAAAGGGAT+GGG | - | chr7.1:3099224-3099243 | MS.gene050891:CDS | 45.0% | |
| TTCATGGACCATACGTCTGA+TGG | - | chr7.1:3098963-3098982 | MS.gene050891:CDS | 45.0% | |
| TTCTTCAGCAGACAGAAGTG+TGG | - | chr7.1:3101476-3101495 | MS.gene050891:CDS | 45.0% | |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.1:3100404-3100423 | MS.gene050891:CDS | 45.0% |
| ! | CTTCTGAGAGATAGTAAGGG+TGG | - | chr7.1:3101075-3101094 | MS.gene050891:intron | 45.0% |
| ! | GAAACAATCTAAGCATCGCC+CGG | + | chr7.1:3099862-3099881 | None:intergenic | 45.0% |
| ! | GACTCATTTGAAGCGAAAGC+TGG | + | chr7.1:3099061-3099080 | None:intergenic | 45.0% |
| ! | TCACTCCATGTGTCTGAGAT+GGG | + | chr7.1:3099137-3099156 | None:intergenic | 45.0% |
| ! | TGAAAGGATCTTGGTGTGTC+TGG | + | chr7.1:3101878-3101897 | None:intergenic | 45.0% |
| ! | TGCAGAGGTGTATCTAACAG+TGG | - | chr7.1:3101180-3101199 | MS.gene050891:intron | 45.0% |
| ! | TTTGCAGCATCGAATTGCCT+AGG | + | chr7.1:3099886-3099905 | None:intergenic | 45.0% |
| ! | TTTTAGGCGCATCCTTGCTA+TGG | + | chr7.1:3100918-3100937 | None:intergenic | 45.0% |
| !! | AGGTATTGGTAAGGAGAAGG+GGG | - | chr7.1:3100240-3100259 | MS.gene050891:CDS | 45.0% |
| !! | CAAAGTTGGTAGCTGCAATG+AGG | - | chr7.1:3100642-3100661 | MS.gene050891:CDS | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | - | chr7.1:3101728-3101747 | MS.gene050891:CDS | 45.0% |
| !! | GGAAGCTGTAGGTATTGGTA+AGG | - | chr7.1:3100231-3100250 | MS.gene050891:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.1:3100454-3100473 | MS.gene050891:CDS | 45.0% |
| !! | TTTCTAGAGCTCTGTCTCCT+CGG | + | chr7.1:3101774-3101793 | None:intergenic | 45.0% |
| !! | GATATATATATATATATAAT+TGG | + | chr7.1:3100086-3100105 | None:intergenic | 5.0% |
| AAAGCTTTGCAAGCTGGTGC+AGG | + | chr7.1:3100313-3100332 | None:intergenic | 50.0% | |
| AACATCTGCTTCTCGGGAAG+TGG | - | chr7.1:3101686-3101705 | MS.gene050891:CDS | 50.0% | |
| AAGTAGAAGATCGGGGCTTG+AGG | + | chr7.1:3100726-3100745 | None:intergenic | 50.0% | |
| CAGGATCTCCATCAGACGTA+TGG | + | chr7.1:3098974-3098993 | None:intergenic | 50.0% | |
| CGAAGATGAGCAAGGCCTAA+AGG | - | chr7.1:3101647-3101666 | MS.gene050891:CDS | 50.0% | |
| CTCTTAGCTTCCACCTTCCT+CGG | + | chr7.1:3101120-3101139 | None:intergenic | 50.0% | |
| GGCAAGGACTGAAAGGATCT+TGG | + | chr7.1:3101887-3101906 | None:intergenic | 50.0% | |
| GTTCCATGCCAAGCCTAGTA+AGG | + | chr7.1:3100267-3100286 | None:intergenic | 50.0% | |
| TAGTTCATGTTGCCTCGGTC+CGG | + | chr7.1:3099363-3099382 | None:intergenic | 50.0% | |
| TCACCGAGAACAAAGGGATG+GGG | - | chr7.1:3099225-3099244 | MS.gene050891:CDS | 50.0% | |
| TGATGATTCACCGAGGAAGG+TGG | - | chr7.1:3101107-3101126 | MS.gene050891:intron | 50.0% | |
| TGCTTCTCGGGAAGTGGTTA+AGG | - | chr7.1:3101692-3101711 | MS.gene050891:CDS | 50.0% | |
| TGGTGCCTGAGGTATGTTGA+AGG | + | chr7.1:3101589-3101608 | None:intergenic | 50.0% | |
| TTCCCCCATCCCTTTGTTCT+CGG | + | chr7.1:3099231-3099250 | None:intergenic | 50.0% | |
| ! | AACCAAACTGATGGGTGCAG+AGG | - | chr7.1:3101165-3101184 | MS.gene050891:intron | 50.0% |
| ! | AGCAGACAGAAGTGTGGAAG+AGG | - | chr7.1:3101482-3101501 | MS.gene050891:CDS | 50.0% |
| ! | ATAACCTTTTTGCCGGACCG+AGG | - | chr7.1:3099348-3099367 | MS.gene050891:CDS | 50.0% |
| !! | GATACCAGTTTGGTGCATGG+CGG | - | chr7.1:3100778-3100797 | MS.gene050891:intron | 50.0% |
| AACGCTTGAACGTCCTTCCC+AGG | + | chr7.1:3100289-3100308 | None:intergenic | 55.0% | |
| AAGGGGGACCTTACTAGGCT+TGG | - | chr7.1:3100256-3100275 | MS.gene050891:CDS | 55.0% | |
| ACTAGGCTTGGCATGGAACC+TGG | - | chr7.1:3100268-3100287 | MS.gene050891:CDS | 55.0% | |
| AGGAGAAGGGGGACCTTACT+AGG | - | chr7.1:3100251-3100270 | MS.gene050891:CDS | 55.0% | |
| ATGGCAGCCGAAGATGAGCA+AGG | - | chr7.1:3101639-3101658 | MS.gene050891:CDS | 55.0% | |
| CACCGAGAACAAAGGGATGG+GGG | - | chr7.1:3099226-3099245 | MS.gene050891:CDS | 55.0% | |
| CACCTCTGCACCCATCAGTT+TGG | + | chr7.1:3101170-3101189 | None:intergenic | 55.0% | |
| CGAGGAAGGTGGAAGCTAAG+AGG | - | chr7.1:3101118-3101137 | MS.gene050891:intron | 55.0% | |
| CTAGGCTTGGCATGGAACCT+GGG | - | chr7.1:3100269-3100288 | MS.gene050891:CDS | 55.0% | |
| CTTTCCGCCATGCACCAAAC+TGG | + | chr7.1:3100785-3100804 | None:intergenic | 55.0% | |
| GGACCTTACTAGGCTTGGCA+TGG | - | chr7.1:3100261-3100280 | MS.gene050891:CDS | 55.0% | |
| GGCGTACTTGTGGAAGCTGT+AGG | - | chr7.1:3100220-3100239 | MS.gene050891:CDS | 55.0% | |
| TCAGACTTCGATGGTGCCTG+AGG | + | chr7.1:3101600-3101619 | None:intergenic | 55.0% | |
| TCCTTTCAGTCCTTGCCGCA+AGG | - | chr7.1:3101890-3101909 | MS.gene050891:CDS | 55.0% | |
| AGCTGTTTGGCCTCGCTTGC+TGG | - | chr7.1:3100417-3100436 | MS.gene050891:CDS | 60.0% | |
| CAACCTCTTGCCAGCAAGCG+AGG | + | chr7.1:3100430-3100449 | None:intergenic | 60.0% | |
| CATGTACGAGCCTTGCGGCA+AGG | + | chr7.1:3101903-3101922 | None:intergenic | 60.0% | |
| GCCTTGCGGCAAGGACTGAA+AGG | + | chr7.1:3101894-3101913 | None:intergenic | 60.0% | |
| GCTTGGCATGGAACCTGGGA+AGG | - | chr7.1:3100273-3100292 | MS.gene050891:CDS | 60.0% | |
| GTTGCCTCGGTCCGGCAAAA+AGG | + | chr7.1:3099355-3099374 | None:intergenic | 60.0% | |
| ! | CTCGCTTGCTGGCAAGAGGT+TGG | - | chr7.1:3100428-3100447 | MS.gene050891:CDS | 60.0% |
| ! | TGGCCTCGCTTGCTGGCAAG+AGG | - | chr7.1:3100424-3100443 | MS.gene050891:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3098930 | 3101923 | 3098930 | ID=MS.gene050891 |
| chr7.1 | mRNA | 3098930 | 3101923 | 3098930 | ID=MS.gene050891.t1;Parent=MS.gene050891 |
| chr7.1 | exon | 3101450 | 3101923 | 3101450 | ID=MS.gene050891.t1.exon1;Parent=MS.gene050891.t1 |
| chr7.1 | CDS | 3101450 | 3101923 | 3101450 | ID=cds.MS.gene050891.t1;Parent=MS.gene050891.t1 |
| chr7.1 | exon | 3098930 | 3100708 | 3098930 | ID=MS.gene050891.t1.exon2;Parent=MS.gene050891.t1 |
| chr7.1 | CDS | 3098930 | 3100708 | 3098930 | ID=cds.MS.gene050891.t1;Parent=MS.gene050891.t1 |
| Gene Sequence |
| Protein sequence |
