Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65461.t1 | XP_013467079.1 | 85.3 | 841 | 116 | 3 | 2 | 838 | 3 | 839 | 0.00E+00 | 1380.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65461.t1 | A0A072VGE3 | 85.3 | 841 | 116 | 3 | 2 | 838 | 3 | 839 | 0.0e+00 | 1380.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053360 | MS.gene65461 | 0.859486 | 4.00E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65461 | MS.gene78584 | PPI |
| MS.gene67159 | MS.gene65461 | PPI |
| MS.gene072481 | MS.gene65461 | PPI |
| MS.gene65461 | MS.gene29350 | PPI |
| MS.gene65461 | MS.gene050891 | PPI |
| MS.gene65461 | MS.gene072482 | PPI |
| MS.gene050738 | MS.gene65461 | PPI |
| MS.gene65461 | MS.gene054416 | PPI |
| MS.gene65461 | MS.gene072483 | PPI |
| MS.gene65461 | MS.gene072542 | PPI |
| MS.gene65461 | MS.gene29351 | PPI |
| MS.gene063225 | MS.gene65461 | PPI |
| MS.gene65461 | MS.gene29352 | PPI |
| MS.gene65461 | MS.gene78588 | PPI |
| MS.gene65461 | MS.gene050890 | PPI |
| MS.gene78587 | MS.gene65461 | PPI |
| MS.gene050893 | MS.gene65461 | PPI |
| MS.gene65461 | MS.gene050889 | PPI |
| MS.gene65461 | MS.gene053360 | PPI |
| MS.gene65461 | MS.gene072484 | PPI |
| MS.gene65461 | MS.gene78586 | PPI |
| MS.gene65461 | MS.gene072485 | PPI |
| MS.gene65461 | MS.gene78585 | PPI |
| MS.gene65461 | MS.gene050892 | PPI |
| MS.gene65461 | MS.gene050942 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65461.t1 | MTR_1g041895 | 90.369 | 841 | 73 | 3 | 2 | 838 | 3 | 839 | 0.0 | 1525 |
| MS.gene65461.t1 | MTR_7g113270 | 69.693 | 815 | 179 | 12 | 1 | 806 | 2 | 757 | 0.0 | 1028 |
| MS.gene65461.t1 | MTR_7g113220 | 68.834 | 815 | 182 | 12 | 1 | 806 | 2 | 753 | 0.0 | 1012 |
| MS.gene65461.t1 | MTR_7g113280 | 67.209 | 799 | 205 | 8 | 1 | 790 | 2 | 752 | 0.0 | 1007 |
| MS.gene65461.t1 | MTR_7g112390 | 56.098 | 779 | 195 | 12 | 130 | 836 | 1 | 704 | 0.0 | 726 |
| MS.gene65461.t1 | MTR_7g113250 | 73.261 | 460 | 94 | 3 | 12 | 469 | 1 | 433 | 0.0 | 664 |
| MS.gene65461.t1 | MTR_7g113250 | 63.317 | 199 | 64 | 3 | 633 | 825 | 436 | 631 | 8.59e-66 | 231 |
| MS.gene65461.t1 | MTR_7g108470 | 44.469 | 452 | 200 | 8 | 21 | 425 | 28 | 475 | 1.12e-112 | 366 |
| MS.gene65461.t1 | MTR_4g119630 | 45.777 | 367 | 174 | 6 | 21 | 371 | 40 | 397 | 4.84e-95 | 306 |
| MS.gene65461.t1 | MTR_3g049350 | 66.972 | 218 | 54 | 2 | 303 | 518 | 3 | 204 | 2.40e-83 | 268 |
| MS.gene65461.t1 | MTR_3g049350 | 60.000 | 75 | 29 | 1 | 633 | 707 | 174 | 247 | 1.47e-19 | 90.1 |
| MS.gene65461.t1 | MTR_2g436970 | 37.764 | 331 | 166 | 9 | 25 | 354 | 17 | 308 | 2.93e-62 | 217 |
| MS.gene65461.t1 | MTR_7g113290 | 74.359 | 117 | 29 | 1 | 567 | 683 | 10 | 125 | 1.68e-43 | 160 |
| MS.gene65461.t1 | MTR_4g119640 | 30.159 | 126 | 57 | 4 | 30 | 143 | 27 | 133 | 4.59e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65461.t1 | AT1G09040 | 44.743 | 447 | 195 | 7 | 22 | 423 | 35 | 474 | 1.75e-111 | 362 |
| MS.gene65461.t1 | AT1G09050 | 44.295 | 447 | 197 | 7 | 22 | 423 | 35 | 474 | 2.54e-108 | 354 |
| MS.gene65461.t1 | AT1G09050 | 44.295 | 447 | 197 | 7 | 22 | 423 | 35 | 474 | 2.54e-108 | 354 |
| MS.gene65461.t1 | AT2G47820 | 40.685 | 467 | 219 | 10 | 17 | 432 | 30 | 489 | 9.58e-101 | 331 |
| MS.gene65461.t1 | AT2G47820 | 40.685 | 467 | 219 | 10 | 17 | 432 | 30 | 489 | 9.58e-101 | 331 |
| MS.gene65461.t1 | AT1G55050 | 43.274 | 446 | 199 | 9 | 25 | 432 | 27 | 456 | 2.41e-97 | 324 |
| MS.gene65461.t1 | AT1G55050 | 43.274 | 446 | 199 | 9 | 25 | 432 | 27 | 456 | 2.41e-97 | 324 |
Find 175 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCATTTGATCCCCTTTC+TGG | 0.062724 | 1.1:+26015629 | None:intergenic |
| TGAGGAGCCTGTTGGTTATT+TGG | 0.173412 | 1.1:-26014517 | MS.gene65461:CDS |
| TGTTACCTCCAAAGATTATT+TGG | 0.174265 | 1.1:-26015813 | MS.gene65461:CDS |
| CGATTCTGCTGATGACTAAT+TGG | 0.221295 | 1.1:+26014789 | None:intergenic |
| ATGTTGTTGCATTCTGTTTA+GGG | 0.225160 | 1.1:+26015360 | None:intergenic |
| ATACAGTTGTTCCTATTAAA+AGG | 0.233999 | 1.1:-26014944 | MS.gene65461:CDS |
| CGCATTGTTGAGAATTCTTC+AGG | 0.256639 | 1.1:-26014885 | MS.gene65461:CDS |
| CCAAATGTAACGATCTCTTC+TGG | 0.272360 | 1.1:-26015901 | MS.gene65461:CDS |
| TCCTCGAGCACGAGAATATT+CGG | 0.276731 | 1.1:+26015686 | None:intergenic |
| AGCTGTTTGGCCCCGCTTAC+TGG | 0.290051 | 1.1:-26015876 | MS.gene65461:CDS |
| AATGTTGTTGCATTCTGTTT+AGG | 0.303378 | 1.1:+26015359 | None:intergenic |
| GTAACATAGCCTCGATTCTT+TGG | 0.306244 | 1.1:+26015830 | None:intergenic |
| TGATGCTTTATGATCCTCTT+TGG | 0.320294 | 1.1:+26015002 | None:intergenic |
| TAAAGATTGTATAAAGTTCA+TGG | 0.326893 | 1.1:-26015549 | MS.gene65461:CDS |
| TTTCTAGTGCTTTGTCTCCT+AGG | 0.328216 | 1.1:+26014468 | None:intergenic |
| GCGGAAAGCCATCTGATCTA+AGG | 0.340846 | 1.1:-26015502 | MS.gene65461:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.348937 | 1.1:-26015889 | MS.gene65461:CDS |
| ACTTTACTCACTGAATTAAC+AGG | 0.353037 | 1.1:+26015464 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.354435 | 1.1:-26015974 | MS.gene65461:CDS |
| CTTCTTTGAAGTCTATTGTT+GGG | 0.354909 | 1.1:-26016105 | MS.gene65461:CDS |
| TGGTACTCATGACCTATTCT+AGG | 0.355398 | 1.1:+26016868 | None:intergenic |
| AATCTTTGACTGGAGGGTTT+CGG | 0.356679 | 1.1:-26015934 | MS.gene65461:CDS |
| CCACAACGACTACTGGTCTT+TGG | 0.359141 | 1.1:-26015241 | MS.gene65461:CDS |
| CTAATTGGATCACAAACAAT+TGG | 0.362277 | 1.1:+26014804 | None:intergenic |
| CTTTATACAATCTTTATTGT+AGG | 0.364885 | 1.1:+26015556 | None:intergenic |
| TTGAAGTCTATTGTTGGGCT+TGG | 0.375908 | 1.1:-26016100 | MS.gene65461:CDS |
| TCTTCTTTGAAGTCTATTGT+TGG | 0.379550 | 1.1:-26016106 | MS.gene65461:CDS |
| TGAAAGGATCTTTGTGTGTC+TGG | 0.380371 | 1.1:+26014364 | None:intergenic |
| AAATCACTTTCCTTTGCAAT+TGG | 0.386218 | 1.1:-26016763 | MS.gene65461:CDS |
| TTTCATCATCCTCCTCTGCC+AGG | 0.392167 | 1.1:+26014736 | None:intergenic |
| CCAGAAGAGATCGTTACATT+TGG | 0.393588 | 1.1:+26015901 | None:intergenic |
| TCCTTCCATGCTCAAGAAAT+CGG | 0.394073 | 1.1:-26016836 | MS.gene65461:CDS |
| CATGGTTATTGATACCAGTT+TGG | 0.395919 | 1.1:-26015531 | MS.gene65461:CDS |
| CACAGGCGTGTTGATTTCTC+TGG | 0.401071 | 1.1:+26015042 | None:intergenic |
| AACTTATGATTCACCAAAGA+TGG | 0.407799 | 1.1:-26015195 | MS.gene65461:CDS |
| ATTCTTAGATAACAAATTGA+TGG | 0.409544 | 1.1:-26016569 | MS.gene65461:CDS |
| CATCATCATTGTTCAGATCA+TGG | 0.417596 | 1.1:-26014300 | MS.gene65461:CDS |
| TGGCAATGGCGGAGGAAGGC+GGG | 0.427130 | 1.1:-26014593 | MS.gene65461:CDS |
| TGGTCTTTGGAGAGAAAGTA+AGG | 0.431040 | 1.1:-26015228 | MS.gene65461:CDS |
| TTTATTGTAGGAAGAAGATC+GGG | 0.433582 | 1.1:+26015568 | None:intergenic |
| AGACATCAATTCATGTCAAT+TGG | 0.437759 | 1.1:-26016689 | MS.gene65461:CDS |
| TGCCGAATTGCTCGAACAAA+AGG | 0.439726 | 1.1:-26014336 | MS.gene65461:CDS |
| CAAATGTAACGATCTCTTCT+GGG | 0.441362 | 1.1:-26015900 | MS.gene65461:CDS |
| CTTGTGGAAGCAGTAGGTAT+TGG | 0.446453 | 1.1:-26016073 | MS.gene65461:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 1.1:+26015494 | None:intergenic |
| TTCTGACGGAAAAGTATTGA+AGG | 0.461870 | 1.1:-26015312 | MS.gene65461:CDS |
| CTTTCCGCCATGTACCAAAC+TGG | 0.468470 | 1.1:+26015517 | None:intergenic |
| AATGAAGAGTGTGGATATCA+TGG | 0.469832 | 1.1:-26016712 | MS.gene65461:CDS |
| CCAACCTCTTGCCAGTAAGC+GGG | 0.472085 | 1.1:+26015865 | None:intergenic |
| CTGGCCGATTGAGTAGCTCC+TGG | 0.472390 | 1.1:-26016663 | MS.gene65461:CDS |
| TTTCAGTTTCAACATGCCTC+AGG | 0.472552 | 1.1:-26014646 | MS.gene65461:CDS |
| GGAGCATCTTCTAATTCAAC+TGG | 0.473411 | 1.1:+26015263 | None:intergenic |
| GCCAACCTCTTGCCAGTAAG+CGG | 0.473500 | 1.1:+26015864 | None:intergenic |
| TGTCTCCTAGGATTTATGTC+AGG | 0.477106 | 1.1:+26014480 | None:intergenic |
| ATGGCAATGGCGGAGGAAGG+CGG | 0.478889 | 1.1:-26014594 | MS.gene65461:CDS |
| CTTGATTTGAGTCCTAGAAT+AGG | 0.483633 | 1.1:-26016880 | MS.gene65461:CDS |
| CAGGAGCTACTCAATCGGCC+AGG | 0.486259 | 1.1:+26016664 | None:intergenic |
| TCATTATGTATCCATGTGAC+TGG | 0.486359 | 1.1:+26016730 | None:intergenic |
| GAAGACAAAGCTTTGCAAGT+TGG | 0.488718 | 1.1:+26015980 | None:intergenic |
| CTCGAAAACTTCTCAACACC+GGG | 0.489787 | 1.1:+26015779 | None:intergenic |
| TAATTGGATCACAAACAATT+GGG | 0.490571 | 1.1:+26014805 | None:intergenic |
| TTCTGAAAATAGCAAAATGA+TGG | 0.492251 | 1.1:-26014613 | MS.gene65461:CDS |
| TCATAAAGCATCAGTTCAAT+CGG | 0.495370 | 1.1:-26014992 | MS.gene65461:CDS |
| GATGCTCCCACAACGACTAC+TGG | 0.495943 | 1.1:-26015248 | MS.gene65461:CDS |
| TTCTTAGATAACAAATTGAT+GGG | 0.497511 | 1.1:-26016568 | MS.gene65461:CDS |
| ATTGATACCAGTTTGGTACA+TGG | 0.498438 | 1.1:-26015524 | MS.gene65461:CDS |
| CTTTATTGTAGGAAGAAGAT+CGG | 0.498545 | 1.1:+26015567 | None:intergenic |
| AAACTGATGGATATCGTAGA+TGG | 0.499430 | 1.1:-26016510 | MS.gene65461:CDS |
| GCTCGACACCAAGCCTAGTA+AGG | 0.499492 | 1.1:+26016035 | None:intergenic |
| AGTAGGTATTGGTAAGGAGA+AGG | 0.501342 | 1.1:-26016062 | MS.gene65461:CDS |
| ATCGTAGATGGTCAGAGTGC+AGG | 0.501650 | 1.1:-26016498 | MS.gene65461:CDS |
| AGGAGAAGGGAGACCTTACT+AGG | 0.501665 | 1.1:-26016048 | MS.gene65461:CDS |
| TCCGATTTCTTGAGCATGGA+AGG | 0.502079 | 1.1:+26016835 | None:intergenic |
| TGTTGGGCTTGGTGTTCTTG+TGG | 0.505949 | 1.1:-26016089 | MS.gene65461:CDS |
| GGAAGGCGGGCAACACCTAA+AGG | 0.506307 | 1.1:-26014580 | MS.gene65461:CDS |
| AGACAGAAGCCTGGCAGAGG+AGG | 0.508502 | 1.1:-26014745 | MS.gene65461:CDS |
| CCCGCTTACTGGCAAGAGGT+TGG | 0.511676 | 1.1:-26015865 | MS.gene65461:CDS |
| GGTGTTCTTGTGGAAGCAGT+AGG | 0.513384 | 1.1:-26016079 | MS.gene65461:CDS |
| CTGCTCCGATTTCTTGAGCA+TGG | 0.516221 | 1.1:+26016831 | None:intergenic |
| GACAAAAGTTCATGTTGCCT+CGG | 0.517703 | 1.1:+26016427 | None:intergenic |
| GTAGGTATTGGTAAGGAGAA+GGG | 0.518232 | 1.1:-26016061 | MS.gene65461:CDS |
| ACCGTTGACAGTTAGAGCAT+TGG | 0.523133 | 1.1:-26014442 | MS.gene65461:CDS |
| TAATGAGGAAGGGCCAGAAA+GGG | 0.523242 | 1.1:-26015642 | MS.gene65461:CDS |
| AGGAGCTACTCAATCGGCCA+GGG | 0.523652 | 1.1:+26016665 | None:intergenic |
| TGGATCACAAACAATTGGGT+TGG | 0.524562 | 1.1:+26014809 | None:intergenic |
| ATCATCATTGTTCAGATCAT+GGG | 0.526314 | 1.1:-26014299 | MS.gene65461:CDS |
| AAGGGAGACCTTACTAGGCT+TGG | 0.528520 | 1.1:-26016043 | MS.gene65461:CDS |
| GAGAATTCTTCAGGAGGTGT+GGG | 0.536899 | 1.1:-26014876 | MS.gene65461:CDS |
| CAAAGACCAGTAGTCGTTGT+GGG | 0.539657 | 1.1:+26015242 | None:intergenic |
| TGAGAATTCTTCAGGAGGTG+TGG | 0.539949 | 1.1:-26014877 | MS.gene65461:CDS |
| GTTGGTAACTGTAATGAGGA+AGG | 0.540015 | 1.1:-26015653 | MS.gene65461:CDS |
| GATATAATACAATCTTTGAC+TGG | 0.540698 | 1.1:-26015944 | MS.gene65461:CDS |
| CAAAATGATGGCAATGGCGG+AGG | 0.541360 | 1.1:-26014601 | MS.gene65461:CDS |
| CTCGAGGAAGAAGCTAAAGT+TGG | 0.542576 | 1.1:-26015671 | MS.gene65461:CDS |
| CTATTCTAGGACTCAAATCA+AGG | 0.544855 | 1.1:+26016881 | None:intergenic |
| AGCAGACAGAAGCCTGGCAG+AGG | 0.545137 | 1.1:-26014748 | MS.gene65461:CDS |
| CGATAATGATGCAAACAAGA+TGG | 0.545756 | 1.1:-26015072 | MS.gene65461:CDS |
| TGCCACTCAGGAAGTAGTTG+AGG | 0.548825 | 1.1:-26014535 | MS.gene65461:CDS |
| GCCTTACGACTGTTCTTCAC+AGG | 0.550268 | 1.1:+26016013 | None:intergenic |
| GCATGGAAGGAATTTCTGCT+TGG | 0.551631 | 1.1:+26016848 | None:intergenic |
| CTCAGCCTGACATAAATCCT+AGG | 0.553700 | 1.1:-26014485 | MS.gene65461:CDS |
| CTAGGATTTATGTCAGGCTG+AGG | 0.553918 | 1.1:+26014486 | None:intergenic |
| TTCTTCAGCAGACAGAAGCC+TGG | 0.554193 | 1.1:-26014754 | MS.gene65461:CDS |
| CAGTCCAGGAGCTACTCAAT+CGG | 0.558016 | 1.1:+26016659 | None:intergenic |
| TAATACAATCTTTGACTGGA+GGG | 0.558243 | 1.1:-26015940 | MS.gene65461:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.558292 | 1.1:-26015501 | MS.gene65461:CDS |
| GGAAGCAGTAGGTATTGGTA+AGG | 0.559954 | 1.1:-26016068 | MS.gene65461:CDS |
| GCAATTCGGCAAGGATTGAA+AGG | 0.561447 | 1.1:+26014348 | None:intergenic |
| ATCGCAAGATACTTTGTCAC+AGG | 0.562087 | 1.1:-26016377 | MS.gene65461:intron |
| TGGCCCCGCTTACTGGCAAG+AGG | 0.562669 | 1.1:-26015869 | MS.gene65461:CDS |
| CTTTCACTTAGCAAGAATCC+TGG | 0.562726 | 1.1:-26016808 | MS.gene65461:CDS |
| AATTCATGTCAATTGGCCCC+TGG | 0.568515 | 1.1:-26016682 | MS.gene65461:CDS |
| TCAGGTTTCTAAGTCATATG+TGG | 0.571418 | 1.1:-26016158 | MS.gene65461:intron |
| TAAAGTTGGTAACTGTAATG+AGG | 0.572386 | 1.1:-26015657 | MS.gene65461:CDS |
| GTAATGAGGAAGGGCCAGAA+AGG | 0.573026 | 1.1:-26015643 | MS.gene65461:CDS |
| ACCGAATATTCTCGTGCTCG+AGG | 0.573234 | 1.1:-26015687 | MS.gene65461:CDS |
| ATGTCTAACAGATGCCACTC+AGG | 0.578658 | 1.1:-26014547 | MS.gene65461:CDS |
| ATAATACAATCTTTGACTGG+AGG | 0.578879 | 1.1:-26015941 | MS.gene65461:CDS |
| AAAGTTGATGTAGATGCTGC+TGG | 0.579391 | 1.1:-26015446 | MS.gene65461:CDS |
| ATCATTATCATTCTCCTCAA+CGG | 0.580480 | 1.1:+26016933 | None:intergenic |
| TTCAATCGGAGAGTAAGATC+AGG | 0.580927 | 1.1:-26014978 | MS.gene65461:CDS |
| TCCAATGCTCTAACTGTCAA+CGG | 0.583651 | 1.1:+26014441 | None:intergenic |
| AAATAGCAAAATGATGGCAA+TGG | 0.584646 | 1.1:-26014607 | MS.gene65461:CDS |
| GCCTGTGAAGAACAGTCGTA+AGG | 0.584704 | 1.1:-26016014 | MS.gene65461:CDS |
| TCGAGGAGGAAACTTGTGAA+AGG | 0.586321 | 1.1:-26015761 | MS.gene65461:CDS |
| ATGATGGCAATGGCGGAGGA+AGG | 0.586995 | 1.1:-26014597 | MS.gene65461:CDS |
| TGTATCCATGTGACTGGGAT+GGG | 0.589361 | 1.1:+26016736 | None:intergenic |
| TGCACAGATTCTGAATCACC+AGG | 0.589910 | 1.1:+26016790 | None:intergenic |
| CCTCGAAAACTTCTCAACAC+CGG | 0.591475 | 1.1:+26015778 | None:intergenic |
| AGGAAGAAGATCGGGGCTTG+AGG | 0.593579 | 1.1:+26015576 | None:intergenic |
| GATACCAATCGACTTTCTGA+CGG | 0.594515 | 1.1:-26015326 | MS.gene65461:CDS |
| GGTGTGGGATCAGATAATCT+AGG | 0.597545 | 1.1:-26014861 | MS.gene65461:CDS |
| GAGATTGACTGCTTGTGCCA+AGG | 0.597834 | 1.1:-26014919 | MS.gene65461:CDS |
| GTTTACCCATCCCAGTCACA+TGG | 0.598464 | 1.1:-26016741 | MS.gene65461:CDS |
| CAACCTCTTGCCAGTAAGCG+GGG | 0.601857 | 1.1:+26015866 | None:intergenic |
| CCAAAGACCAGTAGTCGTTG+TGG | 0.603402 | 1.1:+26015241 | None:intergenic |
| TTGGTAACTGTAATGAGGAA+GGG | 0.605284 | 1.1:-26015652 | MS.gene65461:CDS |
| GAAGTAGTTGAGGAGCCTGT+TGG | 0.610422 | 1.1:-26014525 | MS.gene65461:CDS |
| GGTTTCTAAGTCATATGTGG+AGG | 0.613495 | 1.1:-26016155 | MS.gene65461:CDS |
| CTTAGATAACAAATTGATGG+GGG | 0.615789 | 1.1:-26016566 | MS.gene65461:CDS |
| TTTGTTCGAGCAATTCGGCA+AGG | 0.616285 | 1.1:+26014339 | None:intergenic |
| TCTTAGATAACAAATTGATG+GGG | 0.617361 | 1.1:-26016567 | MS.gene65461:CDS |
| TAGCAAAATGATGGCAATGG+CGG | 0.620029 | 1.1:-26014604 | MS.gene65461:CDS |
| GAACCTAAAATGCTGATATG+TGG | 0.622268 | 1.1:-26015170 | MS.gene65461:CDS |
| CATTATGTATCCATGTGACT+GGG | 0.626289 | 1.1:+26016731 | None:intergenic |
| ATGTATCCATGTGACTGGGA+TGG | 0.628628 | 1.1:+26016735 | None:intergenic |
| TTATGATTCACCAAAGATGG+TGG | 0.628762 | 1.1:-26015192 | MS.gene65461:CDS |
| AGATACATGAGCAATCAAGC+GGG | 0.632146 | 1.1:+26016405 | None:intergenic |
| ATAAAGGGCGAAAATATACA+AGG | 0.632332 | 1.1:-26015415 | MS.gene65461:CDS |
| GCAACTCGAAAGCTAGAAGA+CGG | 0.633733 | 1.1:+26014831 | None:intergenic |
| AATGAGGAAGGGCCAGAAAG+GGG | 0.635015 | 1.1:-26015641 | MS.gene65461:CDS |
| TGGATACATAATGAAGAGTG+TGG | 0.635233 | 1.1:-26016721 | MS.gene65461:CDS |
| GGAGCTACTCAATCGGCCAG+GGG | 0.637073 | 1.1:+26016666 | None:intergenic |
| TCAGAATTCGACAGAACCTG+AGG | 0.637300 | 1.1:+26014630 | None:intergenic |
| GATGGGTAAACCAATTGCAA+AGG | 0.641739 | 1.1:+26016753 | None:intergenic |
| AGATACACCTCTGTGACTGT+CGG | 0.641816 | 1.1:+26015127 | None:intergenic |
| CAGTTGTTCCTATTAAAAGG+AGG | 0.643452 | 1.1:-26014941 | MS.gene65461:CDS |
| CAGATACATGAGCAATCAAG+CGG | 0.645569 | 1.1:+26016404 | None:intergenic |
| AAGGAAAGTAAACCATAGCA+CGG | 0.647183 | 1.1:-26015396 | MS.gene65461:CDS |
| GTTTCTAAGTCATATGTGGA+GGG | 0.647748 | 1.1:-26016154 | MS.gene65461:CDS |
| TGAGTGGCATCTGTTAGACA+TGG | 0.649335 | 1.1:+26014549 | None:intergenic |
| ATTGTTGAGAATTCTTCAGG+AGG | 0.651016 | 1.1:-26014882 | MS.gene65461:CDS |
| GGTCTTTGGAGAGAAAGTAA+GGG | 0.652973 | 1.1:-26015227 | MS.gene65461:CDS |
| CTTTGGAGAGAAAGTAAGGG+TGG | 0.662141 | 1.1:-26015224 | MS.gene65461:CDS |
| CTCCTCAACTACTTCCTGAG+TGG | 0.669937 | 1.1:+26014533 | None:intergenic |
| CACAGAGGTGTATCTACCAG+CGG | 0.680546 | 1.1:-26015119 | MS.gene65461:CDS |
| TCGATTATCATCGAACACAC+AGG | 0.680583 | 1.1:+26015025 | None:intergenic |
| GCATCTTCTAATTCAACTGG+CGG | 0.683679 | 1.1:+26015266 | None:intergenic |
| ATGGAGCACGTGTCTCACGA+AGG | 0.691068 | 1.1:-26016904 | MS.gene65461:CDS |
| TCTGAGCAACCAAAGAATCG+AGG | 0.695442 | 1.1:-26015839 | MS.gene65461:CDS |
| GATACCAGTTTGGTACATGG+CGG | 0.696313 | 1.1:-26015521 | MS.gene65461:CDS |
| TTATTGTAGGAAGAAGATCG+GGG | 0.708515 | 1.1:+26015569 | None:intergenic |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 1.1:+26014886 | None:intergenic |
| AATAAAACCGACAGTCACAG+AGG | 0.723377 | 1.1:-26015134 | MS.gene65461:CDS |
| TCGATGATAATCGACCAAAG+AGG | 0.737307 | 1.1:-26015016 | MS.gene65461:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCTTAGATAACAAATTGA+TGG | - | chr1.1:26014610-26014629 | MS.gene65461:CDS | 20.0% |
| !! | CTTTATACAATCTTTATTGT+AGG | + | chr1.1:26015626-26015645 | None:intergenic | 20.0% |
| !! | TAAAGATTGTATAAAGTTCA+TGG | - | chr1.1:26015630-26015649 | MS.gene65461:CDS | 20.0% |
| !! | TTCTTAGATAACAAATTGAT+GGG | - | chr1.1:26014611-26014630 | MS.gene65461:CDS | 20.0% |
| !!! | GAATGATAATGATATTTTCA+TGG | - | chr1.1:26014256-26014275 | MS.gene65461:CDS | 20.0% |
| !!! | TACTTGGTTTGTTTATTTTT+GGG | - | chr1.1:26014564-26014583 | MS.gene65461:CDS | 20.0% |
| ! | AAAAACCAAATAATCTTTGG+AGG | + | chr1.1:26015374-26015393 | None:intergenic | 25.0% |
| ! | ATACAGTTGTTCCTATTAAA+AGG | - | chr1.1:26016235-26016254 | MS.gene65461:intron | 25.0% |
| ! | CAAGAAGAAAAACATTTGAT+TGG | - | chr1.1:26016918-26016937 | MS.gene65461:CDS | 25.0% |
| ! | CATAGAGATTCAAATAATCA+TGG | + | chr1.1:26014918-26014937 | None:intergenic | 25.0% |
| ! | CTGCTGGTAAAAAATATAAA+GGG | - | chr1.1:26015749-26015768 | MS.gene65461:CDS | 25.0% |
| ! | CTTTGCATATATTTATACTC+AGG | - | chr1.1:26015003-26015022 | MS.gene65461:CDS | 25.0% |
| ! | GAGAAAAACCAAATAATCTT+TGG | + | chr1.1:26015377-26015396 | None:intergenic | 25.0% |
| ! | GATATAATACAATCTTTGAC+TGG | - | chr1.1:26015235-26015254 | MS.gene65461:CDS | 25.0% |
| ! | GTATAAATATATGCAAAGTG+AGG | + | chr1.1:26015001-26015020 | None:intergenic | 25.0% |
| ! | TAATTGGATCACAAACAATT+GGG | + | chr1.1:26016377-26016396 | None:intergenic | 25.0% |
| ! | TCTTAGATAACAAATTGATG+GGG | - | chr1.1:26014612-26014631 | MS.gene65461:CDS | 25.0% |
| !! | ATGTAATGAAAAAAAGGTAC+TGG | + | chr1.1:26014947-26014966 | None:intergenic | 25.0% |
| !! | GAAATACTCTCATTTTACTA+TGG | - | chr1.1:26014635-26014654 | MS.gene65461:CDS | 25.0% |
| !! | GATACAAAAAGTTTTCTACT+TGG | - | chr1.1:26014548-26014567 | MS.gene65461:CDS | 25.0% |
| !! | TTCTGAAAATAGCAAAATGA+TGG | - | chr1.1:26016566-26016585 | MS.gene65461:CDS | 25.0% |
| !!! | ATAGGACAGAAAATTTTTAG+TGG | - | chr1.1:26014728-26014747 | MS.gene65461:CDS | 25.0% |
| !!! | CTACTTGGTTTGTTTATTTT+TGG | - | chr1.1:26014563-26014582 | MS.gene65461:CDS | 25.0% |
| AAATAGCAAAATGATGGCAA+TGG | - | chr1.1:26016572-26016591 | MS.gene65461:CDS | 30.0% | |
| AAATCACTTTCCTTTGCAAT+TGG | - | chr1.1:26014416-26014435 | MS.gene65461:CDS | 30.0% | |
| AACTTATGATTCACCAAAGA+TGG | - | chr1.1:26015984-26016003 | MS.gene65461:CDS | 30.0% | |
| AATGTTGTTGCATTCTGTTT+AGG | + | chr1.1:26015823-26015842 | None:intergenic | 30.0% | |
| ACTTTACTCACTGAATTAAC+AGG | + | chr1.1:26015718-26015737 | None:intergenic | 30.0% | |
| AGACATCAATTCATGTCAAT+TGG | - | chr1.1:26014490-26014509 | MS.gene65461:CDS | 30.0% | |
| ATAAAGGGCGAAAATATACA+AGG | - | chr1.1:26015764-26015783 | MS.gene65461:CDS | 30.0% | |
| ATAATACAATCTTTGACTGG+AGG | - | chr1.1:26015238-26015257 | MS.gene65461:CDS | 30.0% | |
| ATCATCATTGTTCAGATCAT+GGG | - | chr1.1:26016880-26016899 | MS.gene65461:CDS | 30.0% | |
| ATCATTATCATTCTCCTCAA+CGG | + | chr1.1:26014249-26014268 | None:intergenic | 30.0% | |
| ATGTTGTTGCATTCTGTTTA+GGG | + | chr1.1:26015822-26015841 | None:intergenic | 30.0% | |
| CTAATTGGATCACAAACAAT+TGG | + | chr1.1:26016378-26016397 | None:intergenic | 30.0% | |
| CTTAGATAACAAATTGATGG+GGG | - | chr1.1:26014613-26014632 | MS.gene65461:CDS | 30.0% | |
| CTTTATTGTAGGAAGAAGAT+CGG | + | chr1.1:26015615-26015634 | None:intergenic | 30.0% | |
| GAAAAACATTTGATTGGAGA+TGG | - | chr1.1:26016924-26016943 | MS.gene65461:CDS | 30.0% | |
| GACTTCGTAACATTAAATGA+AGG | + | chr1.1:26014856-26014875 | None:intergenic | 30.0% | |
| GAGCAAATGATATATATAGC+TGG | + | chr1.1:26014974-26014993 | None:intergenic | 30.0% | |
| GCTGCTGGTAAAAAATATAA+AGG | - | chr1.1:26015748-26015767 | MS.gene65461:CDS | 30.0% | |
| GGTGTGATGTAATGAAAAAA+AGG | + | chr1.1:26014953-26014972 | None:intergenic | 30.0% | |
| TAATACAATCTTTGACTGGA+GGG | - | chr1.1:26015239-26015258 | MS.gene65461:CDS | 30.0% | |
| TGTTACCTCCAAAGATTATT+TGG | - | chr1.1:26015366-26015385 | MS.gene65461:CDS | 30.0% | |
| TTTATTGTAGGAAGAAGATC+GGG | + | chr1.1:26015614-26015633 | None:intergenic | 30.0% | |
| ! | GGAAAGTTTTACAAAACTGA+TGG | - | chr1.1:26014656-26014675 | MS.gene65461:CDS | 30.0% |
| ! | TCATAAAGCATCAGTTCAAT+CGG | - | chr1.1:26016187-26016206 | MS.gene65461:intron | 30.0% |
| ! | TGTTTTTCCAAATAACCAAC+AGG | + | chr1.1:26016672-26016691 | None:intergenic | 30.0% |
| !! | CTTCTTTGAAGTCTATTGTT+GGG | - | chr1.1:26015074-26015093 | MS.gene65461:CDS | 30.0% |
| !! | TAAAGTTGGTAACTGTAATG+AGG | - | chr1.1:26015522-26015541 | MS.gene65461:CDS | 30.0% |
| !! | TCTTCTTTGAAGTCTATTGT+TGG | - | chr1.1:26015073-26015092 | MS.gene65461:CDS | 30.0% |
| !!! | TATTTGGTTTTTCTCATTCC+CGG | - | chr1.1:26015382-26015401 | MS.gene65461:CDS | 30.0% |
| AAGGAAAGTAAACCATAGCA+CGG | - | chr1.1:26015783-26015802 | MS.gene65461:CDS | 35.0% | |
| AATATATGCAAAGTGAGGAC+TGG | + | chr1.1:26014996-26015015 | None:intergenic | 35.0% | |
| ATTGATACCAGTTTGGTACA+TGG | - | chr1.1:26015655-26015674 | MS.gene65461:CDS | 35.0% | |
| ATTGTTGAGAATTCTTCAGG+AGG | - | chr1.1:26016297-26016316 | MS.gene65461:intron | 35.0% | |
| CAAATGTAACGATCTCTTCT+GGG | - | chr1.1:26015279-26015298 | MS.gene65461:CDS | 35.0% | |
| CAGTTGTTCCTATTAAAAGG+AGG | - | chr1.1:26016238-26016257 | MS.gene65461:intron | 35.0% | |
| CATCATCATTGTTCAGATCA+TGG | - | chr1.1:26016879-26016898 | MS.gene65461:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr1.1:26015648-26015667 | MS.gene65461:CDS | 35.0% | |
| CATTATGTATCCATGTGACT+GGG | + | chr1.1:26014451-26014470 | None:intergenic | 35.0% | |
| CGATAATGATGCAAACAAGA+TGG | - | chr1.1:26016107-26016126 | MS.gene65461:CDS | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr1.1:26016296-26016315 | None:intergenic | 35.0% | |
| GAACCTAAAATGCTGATATG+TGG | - | chr1.1:26016009-26016028 | MS.gene65461:CDS | 35.0% | |
| GTTTCTAAGTCATATGTGGA+GGG | - | chr1.1:26015025-26015044 | MS.gene65461:CDS | 35.0% | |
| TCAGGTTTCTAAGTCATATG+TGG | - | chr1.1:26015021-26015040 | MS.gene65461:CDS | 35.0% | |
| TCATTATGTATCCATGTGAC+TGG | + | chr1.1:26014452-26014471 | None:intergenic | 35.0% | |
| TGATGCTTTATGATCCTCTT+TGG | + | chr1.1:26016180-26016199 | None:intergenic | 35.0% | |
| TGGATACATAATGAAGAGTG+TGG | - | chr1.1:26014458-26014477 | MS.gene65461:CDS | 35.0% | |
| TTATGATTCACCAAAGATGG+TGG | - | chr1.1:26015987-26016006 | MS.gene65461:CDS | 35.0% | |
| TTATTGTAGGAAGAAGATCG+GGG | + | chr1.1:26015613-26015632 | None:intergenic | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | + | chr1.1:26015688-26015707 | None:intergenic | 35.0% | |
| ! | AAACTGATGGATATCGTAGA+TGG | - | chr1.1:26014669-26014688 | MS.gene65461:CDS | 35.0% |
| ! | AATGAAGAGTGTGGATATCA+TGG | - | chr1.1:26014467-26014486 | MS.gene65461:CDS | 35.0% |
| ! | CTTGATTTGAGTCCTAGAAT+AGG | - | chr1.1:26014299-26014318 | MS.gene65461:CDS | 35.0% |
| ! | GTCAATCTCCTCCTTTTAAT+AGG | + | chr1.1:26016249-26016268 | None:intergenic | 35.0% |
| ! | TTGCCACATATCAGCATTTT+AGG | + | chr1.1:26016015-26016034 | None:intergenic | 35.0% |
| ! | TTGGTAACTGTAATGAGGAA+GGG | - | chr1.1:26015527-26015546 | MS.gene65461:CDS | 35.0% |
| ! | TTTTAGACATATCCGTGCTA+TGG | + | chr1.1:26015798-26015817 | None:intergenic | 35.0% |
| !! | ATGAAAAAAAGGTACTGGTG+TGG | + | chr1.1:26014942-26014961 | None:intergenic | 35.0% |
| !! | CTATTCTAGGACTCAAATCA+AGG | + | chr1.1:26014301-26014320 | None:intergenic | 35.0% |
| !! | TGAAAAAAAGGTACTGGTGT+GGG | + | chr1.1:26014941-26014960 | None:intergenic | 35.0% |
| !! | TTCTGACGGAAAAGTATTGA+AGG | - | chr1.1:26015867-26015886 | MS.gene65461:CDS | 35.0% |
| !!! | AGAAAATTTTTAGTGGACCG+AGG | - | chr1.1:26014735-26014754 | MS.gene65461:CDS | 35.0% |
| !!! | ATTTTAGGTTCCACCATCTT+TGG | + | chr1.1:26016000-26016019 | None:intergenic | 35.0% |
| AATAAAACCGACAGTCACAG+AGG | - | chr1.1:26016045-26016064 | MS.gene65461:CDS | 40.0% | |
| AATCTTTGACTGGAGGGTTT+CGG | - | chr1.1:26015245-26015264 | MS.gene65461:CDS | 40.0% | |
| AGATACATGAGCAATCAAGC+GGG | + | chr1.1:26014777-26014796 | None:intergenic | 40.0% | |
| ATCGCAAGATACTTTGTCAC+AGG | - | chr1.1:26014802-26014821 | MS.gene65461:CDS | 40.0% | |
| CAGATACATGAGCAATCAAG+CGG | + | chr1.1:26014778-26014797 | None:intergenic | 40.0% | |
| CCAAATGTAACGATCTCTTC+TGG | - | chr1.1:26015278-26015297 | MS.gene65461:CDS | 40.0% | |
| CCAGAAGAGATCGTTACATT+TGG | + | chr1.1:26015281-26015300 | None:intergenic | 40.0% | |
| CGATTCTGCTGATGACTAAT+TGG | + | chr1.1:26016393-26016412 | None:intergenic | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr1.1:26016294-26016313 | MS.gene65461:intron | 40.0% | |
| CTTTCACTTAGCAAGAATCC+TGG | - | chr1.1:26014371-26014390 | MS.gene65461:CDS | 40.0% | |
| GAAGACAAAGCTTTGCAAGT+TGG | + | chr1.1:26015202-26015221 | None:intergenic | 40.0% | |
| GACAAAAGTTCATGTTGCCT+CGG | + | chr1.1:26014755-26014774 | None:intergenic | 40.0% | |
| GATGGGTAAACCAATTGCAA+AGG | + | chr1.1:26014429-26014448 | None:intergenic | 40.0% | |
| GCATCTTCTAATTCAACTGG+CGG | + | chr1.1:26015916-26015935 | None:intergenic | 40.0% | |
| GGTTTCTAAGTCATATGTGG+AGG | - | chr1.1:26015024-26015043 | MS.gene65461:CDS | 40.0% | |
| GTAACATAGCCTCGATTCTT+TGG | + | chr1.1:26015352-26015371 | None:intergenic | 40.0% | |
| GTCAGAGTGCAGGAAAAAAA+GGG | - | chr1.1:26014691-26014710 | MS.gene65461:CDS | 40.0% | |
| TAGCAAAATGATGGCAATGG+CGG | - | chr1.1:26016575-26016594 | MS.gene65461:CDS | 40.0% | |
| TCAGAGTGCAGGAAAAAAAG+GGG | - | chr1.1:26014692-26014711 | MS.gene65461:CDS | 40.0% | |
| TCCAATGCTCTAACTGTCAA+CGG | + | chr1.1:26016741-26016760 | None:intergenic | 40.0% | |
| TCCTTCCATGCTCAAGAAAT+CGG | - | chr1.1:26014343-26014362 | MS.gene65461:CDS | 40.0% | |
| TCGATGATAATCGACCAAAG+AGG | - | chr1.1:26016163-26016182 | MS.gene65461:intron | 40.0% | |
| TCGATTATCATCGAACACAC+AGG | + | chr1.1:26016157-26016176 | None:intergenic | 40.0% | |
| TCTTCATTTGATCCCCTTTC+TGG | + | chr1.1:26015553-26015572 | None:intergenic | 40.0% | |
| TGAAAGGATCTTTGTGTGTC+TGG | + | chr1.1:26016818-26016837 | None:intergenic | 40.0% | |
| TGGATCACAAACAATTGGGT+TGG | + | chr1.1:26016373-26016392 | None:intergenic | 40.0% | |
| TGGTACTCATGACCTATTCT+AGG | + | chr1.1:26014314-26014333 | None:intergenic | 40.0% | |
| TGTCTCCTAGGATTTATGTC+AGG | + | chr1.1:26016702-26016721 | None:intergenic | 40.0% | |
| TTCAATCGGAGAGTAAGATC+AGG | - | chr1.1:26016201-26016220 | MS.gene65461:intron | 40.0% | |
| TTGAAGTCTATTGTTGGGCT+TGG | - | chr1.1:26015079-26015098 | MS.gene65461:CDS | 40.0% | |
| TTTCAGTTTCAACATGCCTC+AGG | - | chr1.1:26016533-26016552 | MS.gene65461:CDS | 40.0% | |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr1.1:26016617-26016636 | None:intergenic | 40.0% |
| ! | GATACCAATCGACTTTCTGA+CGG | - | chr1.1:26015853-26015872 | MS.gene65461:CDS | 40.0% |
| ! | GGAGCATCTTCTAATTCAAC+TGG | + | chr1.1:26015919-26015938 | None:intergenic | 40.0% |
| ! | GGTCTTTGGAGAGAAAGTAA+GGG | - | chr1.1:26015952-26015971 | MS.gene65461:CDS | 40.0% |
| ! | TATTTTACTAGTAGCACCGC+TGG | + | chr1.1:26016079-26016098 | None:intergenic | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr1.1:26015205-26015224 | MS.gene65461:CDS | 40.0% |
| ! | TGCCTTTTGTTCGAGCAATT+CGG | + | chr1.1:26016848-26016867 | None:intergenic | 40.0% |
| ! | TGGTCTTTGGAGAGAAAGTA+AGG | - | chr1.1:26015951-26015970 | MS.gene65461:CDS | 40.0% |
| ! | TTTCTAGTGCTTTGTCTCCT+AGG | + | chr1.1:26016714-26016733 | None:intergenic | 40.0% |
| ! | TTTTCCGTCAGAAAGTCGAT+TGG | + | chr1.1:26015860-26015879 | None:intergenic | 40.0% |
| ! | TTTTGTATCTGCATCAGTCC+AGG | + | chr1.1:26014537-26014556 | None:intergenic | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | - | chr1.1:26015733-26015752 | MS.gene65461:CDS | 40.0% |
| !! | AGTAGGTATTGGTAAGGAGA+AGG | - | chr1.1:26015117-26015136 | MS.gene65461:CDS | 40.0% |
| !! | GTAGGTATTGGTAAGGAGAA+GGG | - | chr1.1:26015118-26015137 | MS.gene65461:CDS | 40.0% |
| !! | GTTGGTAACTGTAATGAGGA+AGG | - | chr1.1:26015526-26015545 | MS.gene65461:CDS | 40.0% |
| AATTCATGTCAATTGGCCCC+TGG | - | chr1.1:26014497-26014516 | MS.gene65461:CDS | 45.0% | |
| ACCGTTGACAGTTAGAGCAT+TGG | - | chr1.1:26016737-26016756 | MS.gene65461:CDS | 45.0% | |
| AGAGTGCAGGAAAAAAAGGG+GGG | - | chr1.1:26014694-26014713 | MS.gene65461:CDS | 45.0% | |
| AGATACACCTCTGTGACTGT+CGG | + | chr1.1:26016055-26016074 | None:intergenic | 45.0% | |
| ATGTATCCATGTGACTGGGA+TGG | + | chr1.1:26014447-26014466 | None:intergenic | 45.0% | |
| ATGTCTAACAGATGCCACTC+AGG | - | chr1.1:26016632-26016651 | MS.gene65461:CDS | 45.0% | |
| CAAAGACCAGTAGTCGTTGT+GGG | + | chr1.1:26015940-26015959 | None:intergenic | 45.0% | |
| CAGAGTGCAGGAAAAAAAGG+GGG | - | chr1.1:26014693-26014712 | MS.gene65461:CDS | 45.0% | |
| CCTCGAAAACTTCTCAACAC+CGG | + | chr1.1:26015404-26015423 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | - | chr1.1:26015678-26015697 | MS.gene65461:CDS | 45.0% | |
| CTAGGATTTATGTCAGGCTG+AGG | + | chr1.1:26016696-26016715 | None:intergenic | 45.0% | |
| CTCAGCCTGACATAAATCCT+AGG | - | chr1.1:26016694-26016713 | MS.gene65461:CDS | 45.0% | |
| CTCGAAAACTTCTCAACACC+GGG | + | chr1.1:26015403-26015422 | None:intergenic | 45.0% | |
| CTCGAGGAAGAAGCTAAAGT+TGG | - | chr1.1:26015508-26015527 | MS.gene65461:CDS | 45.0% | |
| CTTGTGGAAGCAGTAGGTAT+TGG | - | chr1.1:26015106-26015125 | MS.gene65461:CDS | 45.0% | |
| GATACCAGTTTGGTACATGG+CGG | - | chr1.1:26015658-26015677 | MS.gene65461:CDS | 45.0% | |
| GCAACTCGAAAGCTAGAAGA+CGG | + | chr1.1:26016351-26016370 | None:intergenic | 45.0% | |
| GCAATTCGGCAAGGATTGAA+AGG | + | chr1.1:26016834-26016853 | None:intergenic | 45.0% | |
| GCATGGAAGGAATTTCTGCT+TGG | + | chr1.1:26014334-26014353 | None:intergenic | 45.0% | |
| GGTCAGAGTGCAGGAAAAAA+AGG | - | chr1.1:26014690-26014709 | MS.gene65461:CDS | 45.0% | |
| GGTGTGGGATCAGATAATCT+AGG | - | chr1.1:26016318-26016337 | MS.gene65461:intron | 45.0% | |
| TAATGAGGAAGGGCCAGAAA+GGG | - | chr1.1:26015537-26015556 | MS.gene65461:CDS | 45.0% | |
| TCAGAATTCGACAGAACCTG+AGG | + | chr1.1:26016552-26016571 | None:intergenic | 45.0% | |
| TCCGATTTCTTGAGCATGGA+AGG | + | chr1.1:26014347-26014366 | None:intergenic | 45.0% | |
| TCCTCGAGCACGAGAATATT+CGG | + | chr1.1:26015496-26015515 | None:intergenic | 45.0% | |
| TCGAGGAGGAAACTTGTGAA+AGG | - | chr1.1:26015418-26015437 | MS.gene65461:CDS | 45.0% | |
| TCTGAGCAACCAAAGAATCG+AGG | - | chr1.1:26015340-26015359 | MS.gene65461:CDS | 45.0% | |
| TGAGAATTCTTCAGGAGGTG+TGG | - | chr1.1:26016302-26016321 | MS.gene65461:intron | 45.0% | |
| TGAGTGGCATCTGTTAGACA+TGG | + | chr1.1:26016633-26016652 | None:intergenic | 45.0% | |
| TGCACAGATTCTGAATCACC+AGG | + | chr1.1:26014392-26014411 | None:intergenic | 45.0% | |
| TGCCGAATTGCTCGAACAAA+AGG | - | chr1.1:26016843-26016862 | MS.gene65461:CDS | 45.0% | |
| TGTATCCATGTGACTGGGAT+GGG | + | chr1.1:26014446-26014465 | None:intergenic | 45.0% | |
| TTTGTTCGAGCAATTCGGCA+AGG | + | chr1.1:26016843-26016862 | None:intergenic | 45.0% | |
| ! | AATGCGGCTTTTCTCTTCCT+TGG | + | chr1.1:26016280-26016299 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr1.1:26015290-26015309 | MS.gene65461:CDS | 45.0% |
| ! | CTTTGGAGAGAAAGTAAGGG+TGG | - | chr1.1:26015955-26015974 | MS.gene65461:CDS | 45.0% |
| ! | GAGAATTCTTCAGGAGGTGT+GGG | - | chr1.1:26016303-26016322 | MS.gene65461:intron | 45.0% |
| ! | TGAGGAGCCTGTTGGTTATT+TGG | - | chr1.1:26016662-26016681 | MS.gene65461:CDS | 45.0% |
| !! | GGAAGCAGTAGGTATTGGTA+AGG | - | chr1.1:26015111-26015130 | MS.gene65461:CDS | 45.0% |
| !! | GTGTTGAGAAGTTTTCGAGG+AGG | - | chr1.1:26015404-26015423 | MS.gene65461:CDS | 45.0% |
| AAGGGAGACCTTACTAGGCT+TGG | - | chr1.1:26015136-26015155 | MS.gene65461:CDS | 50.0% | |
| AATGAGGAAGGGCCAGAAAG+GGG | - | chr1.1:26015538-26015557 | MS.gene65461:CDS | 50.0% | |
| ACCGAATATTCTCGTGCTCG+AGG | - | chr1.1:26015492-26015511 | MS.gene65461:CDS | 50.0% | |
| AGGAGAAGGGAGACCTTACT+AGG | - | chr1.1:26015131-26015150 | MS.gene65461:CDS | 50.0% | |
| AGTGCAGGAAAAAAAGGGGG+GGG | - | chr1.1:26014696-26014715 | MS.gene65461:CDS | 50.0% | |
| ATCGTAGATGGTCAGAGTGC+AGG | - | chr1.1:26014681-26014700 | MS.gene65461:CDS | 50.0% | |
| CAAAATGATGGCAATGGCGG+AGG | - | chr1.1:26016578-26016597 | MS.gene65461:CDS | 50.0% | |
| CAGTCCAGGAGCTACTCAAT+CGG | + | chr1.1:26014523-26014542 | None:intergenic | 50.0% | |
| CCAAAGACCAGTAGTCGTTG+TGG | + | chr1.1:26015941-26015960 | None:intergenic | 50.0% | |
| CTCCTCAACTACTTCCTGAG+TGG | + | chr1.1:26016649-26016668 | None:intergenic | 50.0% | |
| CTGCTCCGATTTCTTGAGCA+TGG | + | chr1.1:26014351-26014370 | None:intergenic | 50.0% | |
| CTTTCCGCCATGTACCAAAC+TGG | + | chr1.1:26015665-26015684 | None:intergenic | 50.0% | |
| GAAGTAGTTGAGGAGCCTGT+TGG | - | chr1.1:26016654-26016673 | MS.gene65461:CDS | 50.0% | |
| GAGATTGACTGCTTGTGCCA+AGG | - | chr1.1:26016260-26016279 | MS.gene65461:intron | 50.0% | |
| GAGTGCAGGAAAAAAAGGGG+GGG | - | chr1.1:26014695-26014714 | MS.gene65461:CDS | 50.0% | |
| GCCTGTGAAGAACAGTCGTA+AGG | - | chr1.1:26015165-26015184 | MS.gene65461:CDS | 50.0% | |
| GCCTTACGACTGTTCTTCAC+AGG | + | chr1.1:26015169-26015188 | None:intergenic | 50.0% | |
| GCGGAAAGCCATCTGATCTA+AGG | - | chr1.1:26015677-26015696 | MS.gene65461:CDS | 50.0% | |
| GGTGTTCTTGTGGAAGCAGT+AGG | - | chr1.1:26015100-26015119 | MS.gene65461:CDS | 50.0% | |
| GTAATGAGGAAGGGCCAGAA+AGG | - | chr1.1:26015536-26015555 | MS.gene65461:CDS | 50.0% | |
| GTTTACCCATCCCAGTCACA+TGG | - | chr1.1:26014438-26014457 | MS.gene65461:CDS | 50.0% | |
| TGCCACTCAGGAAGTAGTTG+AGG | - | chr1.1:26016644-26016663 | MS.gene65461:CDS | 50.0% | |
| TTCTTCAGCAGACAGAAGCC+TGG | - | chr1.1:26016425-26016444 | MS.gene65461:CDS | 50.0% | |
| TTTCATCATCCTCCTCTGCC+AGG | + | chr1.1:26016446-26016465 | None:intergenic | 50.0% | |
| ! | CACAGAGGTGTATCTACCAG+CGG | - | chr1.1:26016060-26016079 | MS.gene65461:CDS | 50.0% |
| !! | CACAGGCGTGTTGATTTCTC+TGG | + | chr1.1:26016140-26016159 | None:intergenic | 50.0% |
| !! | CCACAACGACTACTGGTCTT+TGG | - | chr1.1:26015938-26015957 | MS.gene65461:CDS | 50.0% |
| !! | CCGGTGTTGAGAAGTTTTCG+AGG | - | chr1.1:26015401-26015420 | MS.gene65461:CDS | 50.0% |
| !! | TGTTGGGCTTGGTGTTCTTG+TGG | - | chr1.1:26015090-26015109 | MS.gene65461:CDS | 50.0% |
| AGGAAGAAGATCGGGGCTTG+AGG | + | chr1.1:26015606-26015625 | None:intergenic | 55.0% | |
| AGGAGCTACTCAATCGGCCA+GGG | + | chr1.1:26014517-26014536 | None:intergenic | 55.0% | |
| AGGGGGGGGAAACGTATGAT+AGG | - | chr1.1:26014710-26014729 | MS.gene65461:CDS | 55.0% | |
| ATGGAGCACGTGTCTCACGA+AGG | - | chr1.1:26014275-26014294 | MS.gene65461:CDS | 55.0% | |
| CAACCTCTTGCCAGTAAGCG+GGG | + | chr1.1:26015316-26015335 | None:intergenic | 55.0% | |
| CCAACCTCTTGCCAGTAAGC+GGG | + | chr1.1:26015317-26015336 | None:intergenic | 55.0% | |
| GATGCTCCCACAACGACTAC+TGG | - | chr1.1:26015931-26015950 | MS.gene65461:CDS | 55.0% | |
| GCCAACCTCTTGCCAGTAAG+CGG | + | chr1.1:26015318-26015337 | None:intergenic | 55.0% | |
| GCTCGACACCAAGCCTAGTA+AGG | + | chr1.1:26015147-26015166 | None:intergenic | 55.0% | |
| ! | ATGATGGCAATGGCGGAGGA+AGG | - | chr1.1:26016582-26016601 | MS.gene65461:CDS | 55.0% |
| AGACAGAAGCCTGGCAGAGG+AGG | - | chr1.1:26016434-26016453 | MS.gene65461:CDS | 60.0% | |
| AGCAGACAGAAGCCTGGCAG+AGG | - | chr1.1:26016431-26016450 | MS.gene65461:CDS | 60.0% | |
| AGCTGTTTGGCCCCGCTTAC+TGG | - | chr1.1:26015303-26015322 | MS.gene65461:CDS | 60.0% | |
| CAGGAGCTACTCAATCGGCC+AGG | + | chr1.1:26014518-26014537 | None:intergenic | 60.0% | |
| CCCGCTTACTGGCAAGAGGT+TGG | - | chr1.1:26015314-26015333 | MS.gene65461:CDS | 60.0% | |
| CTGGCCGATTGAGTAGCTCC+TGG | - | chr1.1:26014516-26014535 | MS.gene65461:CDS | 60.0% | |
| GGAAGGCGGGCAACACCTAA+AGG | - | chr1.1:26016599-26016618 | MS.gene65461:CDS | 60.0% | |
| GGAGCTACTCAATCGGCCAG+GGG | + | chr1.1:26014516-26014535 | None:intergenic | 60.0% | |
| ! | ATGGCAATGGCGGAGGAAGG+CGG | - | chr1.1:26016585-26016604 | MS.gene65461:CDS | 60.0% |
| TGGCCCCGCTTACTGGCAAG+AGG | - | chr1.1:26015310-26015329 | MS.gene65461:CDS | 65.0% | |
| ! | TGGCAATGGCGGAGGAAGGC+GGG | - | chr1.1:26016586-26016605 | MS.gene65461:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 26014242 | 26016959 | 26014242 | ID=MS.gene65461 |
| chr1.1 | mRNA | 26014242 | 26016959 | 26014242 | ID=MS.gene65461.t1;Parent=MS.gene65461 |
| chr1.1 | exon | 26016378 | 26016959 | 26016378 | ID=MS.gene65461.t1.exon1;Parent=MS.gene65461.t1 |
| chr1.1 | CDS | 26016378 | 26016959 | 26016378 | ID=cds.MS.gene65461.t1;Parent=MS.gene65461.t1 |
| chr1.1 | exon | 26014242 | 26016176 | 26014242 | ID=MS.gene65461.t1.exon2;Parent=MS.gene65461.t1 |
| chr1.1 | CDS | 26014242 | 26016176 | 26014242 | ID=cds.MS.gene65461.t1;Parent=MS.gene65461.t1 |
| Gene Sequence |
| Protein sequence |
