Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072484.t1 | XP_024626885.1 | 92.5 | 642 | 46 | 1 | 1 | 640 | 1 | 642 | 0.00E+00 | 1187.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072484.t1 | A2Q346 | 92.4 | 631 | 46 | 1 | 13 | 641 | 1 | 631 | 0.0e+00 | 1164.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050892 | MS.gene072484 | 0.918177 | 2.15E-86 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054416 | MS.gene072484 | PPI |
| MS.gene072484 | MS.gene050890 | PPI |
| MS.gene072484 | MS.gene050889 | PPI |
| MS.gene072484 | MS.gene78586 | PPI |
| MS.gene072484 | MS.gene072485 | PPI |
| MS.gene67159 | MS.gene072484 | PPI |
| MS.gene050889 | MS.gene072484 | PPI |
| MS.gene072484 | MS.gene050892 | PPI |
| MS.gene072481 | MS.gene072484 | PPI |
| MS.gene072483 | MS.gene072484 | PPI |
| MS.gene29350 | MS.gene072484 | PPI |
| MS.gene072484 | MS.gene78584 | PPI |
| MS.gene29352 | MS.gene072484 | PPI |
| MS.gene050738 | MS.gene072484 | PPI |
| MS.gene063225 | MS.gene072484 | PPI |
| MS.gene072484 | MS.gene050942 | PPI |
| MS.gene072484 | MS.gene29350 | PPI |
| MS.gene072484 | MS.gene050891 | PPI |
| MS.gene072484 | MS.gene072482 | PPI |
| MS.gene072484 | MS.gene072542 | PPI |
| MS.gene65461 | MS.gene072484 | PPI |
| MS.gene78587 | MS.gene072484 | PPI |
| MS.gene050893 | MS.gene072484 | PPI |
| MS.gene29351 | MS.gene072484 | PPI |
| MS.gene072484 | MS.gene29352 | PPI |
| MS.gene78585 | MS.gene072484 | PPI |
| MS.gene072484 | MS.gene78588 | PPI |
| MS.gene053360 | MS.gene072484 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072484.t1 | MTR_7g113250 | 92.393 | 631 | 46 | 1 | 13 | 641 | 1 | 631 | 0.0 | 1204 |
| MS.gene072484.t1 | MTR_1g041895 | 73.348 | 469 | 98 | 2 | 1 | 442 | 1 | 469 | 0.0 | 687 |
| MS.gene072484.t1 | MTR_1g041895 | 63.184 | 201 | 69 | 3 | 442 | 641 | 630 | 826 | 6.87e-65 | 229 |
| MS.gene072484.t1 | MTR_7g113280 | 74.775 | 444 | 110 | 2 | 1 | 442 | 1 | 444 | 0.0 | 672 |
| MS.gene072484.t1 | MTR_7g113280 | 62.874 | 167 | 60 | 1 | 442 | 606 | 586 | 752 | 1.40e-54 | 199 |
| MS.gene072484.t1 | MTR_7g113270 | 75.506 | 445 | 100 | 3 | 1 | 442 | 1 | 439 | 0.0 | 649 |
| MS.gene072484.t1 | MTR_7g113270 | 71.429 | 175 | 49 | 1 | 445 | 619 | 581 | 754 | 8.58e-74 | 252 |
| MS.gene072484.t1 | MTR_7g113220 | 74.550 | 444 | 100 | 3 | 1 | 441 | 1 | 434 | 0.0 | 643 |
| MS.gene072484.t1 | MTR_7g113220 | 71.429 | 175 | 49 | 1 | 445 | 619 | 577 | 750 | 1.13e-72 | 249 |
| MS.gene072484.t1 | MTR_3g049350 | 91.393 | 244 | 19 | 1 | 278 | 519 | 4 | 247 | 4.93e-155 | 447 |
| MS.gene072484.t1 | MTR_7g112390 | 62.426 | 338 | 55 | 3 | 105 | 442 | 1 | 266 | 3.67e-129 | 397 |
| MS.gene072484.t1 | MTR_7g112390 | 54.774 | 199 | 55 | 3 | 442 | 639 | 527 | 691 | 7.49e-51 | 187 |
| MS.gene072484.t1 | MTR_7g108470 | 46.471 | 340 | 172 | 3 | 68 | 400 | 140 | 476 | 5.92e-97 | 318 |
| MS.gene072484.t1 | MTR_4g119630 | 39.945 | 363 | 174 | 5 | 13 | 336 | 31 | 388 | 2.99e-79 | 259 |
| MS.gene072484.t1 | MTR_2g436970 | 39.016 | 305 | 171 | 9 | 26 | 328 | 17 | 308 | 3.58e-58 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072484.t1 | AT1G09040 | 48.266 | 346 | 166 | 4 | 60 | 395 | 130 | 472 | 1.73e-96 | 317 |
| MS.gene072484.t1 | AT1G09050 | 48.348 | 333 | 161 | 3 | 71 | 395 | 143 | 472 | 8.84e-93 | 306 |
| MS.gene072484.t1 | AT1G09050 | 48.348 | 333 | 161 | 3 | 71 | 395 | 143 | 472 | 8.84e-93 | 306 |
| MS.gene072484.t1 | AT2G47820 | 36.543 | 457 | 211 | 9 | 25 | 406 | 37 | 489 | 5.69e-84 | 281 |
| MS.gene072484.t1 | AT2G47820 | 36.543 | 457 | 211 | 9 | 25 | 406 | 37 | 489 | 5.69e-84 | 281 |
| MS.gene072484.t1 | AT1G55050 | 37.783 | 442 | 202 | 7 | 26 | 406 | 27 | 456 | 3.14e-82 | 278 |
| MS.gene072484.t1 | AT1G55050 | 37.783 | 442 | 202 | 7 | 26 | 406 | 27 | 456 | 3.14e-82 | 278 |
Find 118 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCAAGATTCTTTGTTAC+AGG | 0.220266 | 7.3:-3669312 | MS.gene072484:intron |
| CCAGAAGAGTTCATTACTTT+TGG | 0.252967 | 7.3:+3668824 | None:intergenic |
| ACTTTACTCACTGAATTAAT+AGG | 0.270204 | 7.3:+3668387 | None:intergenic |
| TCGGAGTGCATGAAGTTAAA+AGG | 0.272347 | 7.3:-3669422 | MS.gene072484:CDS |
| TGTTACCTCTGATGATTATC+TGG | 0.279909 | 7.3:-3668736 | MS.gene072484:CDS |
| CCAAAAGTAATGAACTCTTC+TGG | 0.298884 | 7.3:-3668824 | MS.gene072484:CDS |
| CATGGTTCCTGATGCCAGTT+TGG | 0.323236 | 7.3:-3668454 | MS.gene072484:CDS |
| TGCAAAACTTTGTCTTCTCT+TGG | 0.332450 | 7.3:-3668897 | MS.gene072484:CDS |
| GGAATTTCCGCCTGGTATTC+CGG | 0.334652 | 7.3:+3669713 | None:intergenic |
| ACGGAAAGCCATCTGATCTA+AGG | 0.340846 | 7.3:-3668425 | MS.gene072484:CDS |
| AATCTTTGACAGGAGGATTT+CGG | 0.353199 | 7.3:-3668857 | MS.gene072484:CDS |
| CGACTGCTTCTTCTTCTTTG+AGG | 0.363013 | 7.3:+3668595 | None:intergenic |
| AACTCTTCTGGGAAGCTGTT+TGG | 0.365864 | 7.3:-3668812 | MS.gene072484:CDS |
| AAAGGGAGAAAATGTATGAT+TGG | 0.366261 | 7.3:-3669404 | MS.gene072484:CDS |
| TTTCTATTGCTCTGTCTCCT+TGG | 0.376494 | 7.3:+3667865 | None:intergenic |
| TAAGATGATCTTGGTGTGTC+TGG | 0.380602 | 7.3:+3667761 | None:intergenic |
| CTTTCCGTCATGAGCCAAAC+TGG | 0.381154 | 7.3:+3668440 | None:intergenic |
| GAGATAGAAAAGGGATCAAA+TGG | 0.390082 | 7.3:-3668555 | MS.gene072484:CDS |
| TCTTTGAGGACGAGAATATT+CGG | 0.393562 | 7.3:+3668609 | None:intergenic |
| CAAAAGTAATGAACTCTTCT+GGG | 0.407006 | 7.3:-3668823 | MS.gene072484:CDS |
| ACTATGCTTGGTGTCGAACC+TGG | 0.407445 | 7.3:-3668951 | MS.gene072484:CDS |
| TAAAGATCACATCAAATTCA+TGG | 0.412175 | 7.3:-3668472 | MS.gene072484:CDS |
| AAATCACGCTCCTATGCAAT+TGG | 0.415021 | 7.3:-3669620 | MS.gene072484:CDS |
| CTTCTCTGATTTCTTAATCA+AGG | 0.416004 | 7.3:+3669688 | None:intergenic |
| CATAGAACTCCTTGTGATGT+TGG | 0.427764 | 7.3:-3667916 | MS.gene072484:CDS |
| CCTCGTCATTGTTCAGATCA+TGG | 0.433562 | 7.3:-3667697 | MS.gene072484:CDS |
| TTCAATTCCCTTAGATCAGA+TGG | 0.449915 | 7.3:+3668417 | None:intergenic |
| AATCTGATGGATTTCGTAGA+TGG | 0.452593 | 7.3:-3669445 | MS.gene072484:CDS |
| ATGGATCATGCGTCTTATGA+AGG | 0.458560 | 7.3:-3669761 | MS.gene072484:CDS |
| TAGTTCATGTTGCCTTGGTC+CGG | 0.458759 | 7.3:+3669367 | None:intergenic |
| TCATGAGCCAAACTGGCATC+AGG | 0.465831 | 7.3:+3668447 | None:intergenic |
| AAAGATTCATTGAGAACAAA+GGG | 0.468914 | 7.3:-3669508 | MS.gene072484:CDS |
| AGCAAGGATTAAGATGATCT+TGG | 0.470445 | 7.3:+3667752 | None:intergenic |
| AAGGGAGAAAATGTATGATT+GGG | 0.474008 | 7.3:-3669403 | MS.gene072484:CDS |
| TCCAATGCTCTAACTGTCAA+TGG | 0.474242 | 7.3:+3667838 | None:intergenic |
| AATGGTGGAAGAAGCCAAGC+AGG | 0.474606 | 7.3:-3667998 | MS.gene072484:CDS |
| TCCTTGTGATGTTGGTTCGT+TGG | 0.475667 | 7.3:-3667908 | MS.gene072484:CDS |
| TCTTCTTTGAAGTTTACTGT+TGG | 0.479265 | 7.3:-3669026 | MS.gene072484:CDS |
| CTCGTCATTGTTCAGATCAT+GGG | 0.487535 | 7.3:-3667696 | MS.gene072484:CDS |
| TCTGATTTCTTAATCAAGGA+AGG | 0.491698 | 7.3:+3669692 | None:intergenic |
| CTTGAATCGAGTCCTCGAAT+AGG | 0.496723 | 7.3:-3669737 | MS.gene072484:CDS |
| CTATTCGAGGACTCGATTCA+AGG | 0.497921 | 7.3:+3669738 | None:intergenic |
| ACCATTGACAGTTAGAGCAT+TGG | 0.500083 | 7.3:-3667839 | MS.gene072484:CDS |
| GATATATTACAATCTTTGAC+AGG | 0.500185 | 7.3:-3668867 | MS.gene072484:CDS |
| TGCTGCAAGGATTGTAAAAG+AGG | 0.501061 | 7.3:-3667733 | MS.gene072484:CDS |
| AAGGGAGACCTTACTATGCT+TGG | 0.508646 | 7.3:-3668963 | MS.gene072484:CDS |
| TGGTATTCCGGACCTATTCG+AGG | 0.509678 | 7.3:+3669725 | None:intergenic |
| GTTCGACACCAAGCATAGTA+AGG | 0.513375 | 7.3:+3668955 | None:intergenic |
| CGGAGTGCATGAAGTTAAAA+GGG | 0.513886 | 7.3:-3669421 | MS.gene072484:CDS |
| TTCATTGAGAACAAAGGGAT+GGG | 0.514764 | 7.3:-3669503 | MS.gene072484:CDS |
| TCGAATAGGTCCGGAATACC+AGG | 0.518214 | 7.3:-3669723 | MS.gene072484:CDS |
| CGCTAACTGAATCAAAGTAA+TGG | 0.519124 | 7.3:+3668658 | None:intergenic |
| AACGTCCGACTGTTCTTCCC+AGG | 0.523209 | 7.3:+3668933 | None:intergenic |
| CTTGAAAACTTCTCAACACC+GGG | 0.523734 | 7.3:+3668702 | None:intergenic |
| CAATGAGGAAGAGATAGAAA+AGG | 0.526578 | 7.3:-3668565 | MS.gene072484:CDS |
| GATAATAGTTCATGTTGCCT+TGG | 0.527370 | 7.3:+3669362 | None:intergenic |
| ATCGAGTCCTCGAATAGGTC+CGG | 0.527806 | 7.3:-3669732 | MS.gene072484:CDS |
| AATGAGGAAGAGATAGAAAA+GGG | 0.530032 | 7.3:-3668564 | MS.gene072484:CDS |
| CTTGTGGAAGCAGTAGGGAT+TGG | 0.530676 | 7.3:-3668993 | MS.gene072484:CDS |
| ATCGCTCCATGTTTCTGACA+TGG | 0.531800 | 7.3:+3669592 | None:intergenic |
| CGCGCTTACTAGCAAGAGGA+TGG | 0.533696 | 7.3:-3668788 | MS.gene072484:CDS |
| TGTTGGAATAAACGTTCTTG+TGG | 0.541566 | 7.3:-3669009 | MS.gene072484:CDS |
| AAAAGATTCATTGAGAACAA+AGG | 0.544303 | 7.3:-3669509 | MS.gene072484:CDS |
| AGTAGGGATTGGTAACAAGA+AGG | 0.546680 | 7.3:-3668982 | MS.gene072484:CDS |
| CGGAAAGCCATCTGATCTAA+GGG | 0.547174 | 7.3:-3668424 | MS.gene072484:CDS |
| TCAGCAGGATTCATTTGAAG+TGG | 0.550741 | 7.3:+3669662 | None:intergenic |
| GTAGGGATTGGTAACAAGAA+GGG | 0.553888 | 7.3:-3668981 | MS.gene072484:CDS |
| AGAAGCCAAGCAGGGCGTAA+AGG | 0.554185 | 7.3:-3667989 | MS.gene072484:CDS |
| AACGTTCTTGTGGAAGCAGT+AGG | 0.554364 | 7.3:-3668999 | MS.gene072484:CDS |
| TGTCTCCTTGGATTTAGATG+AGG | 0.555499 | 7.3:+3667877 | None:intergenic |
| TCAGTTAGTCATCAGCAGAA+TGG | 0.556880 | 7.3:-3668195 | MS.gene072484:CDS |
| TCAAGGAAGGAATTTCCGCC+TGG | 0.558314 | 7.3:+3669705 | None:intergenic |
| AATTCTTGCATGTGCCAAAG+AGG | 0.562079 | 7.3:-3667801 | MS.gene072484:CDS |
| TCAAGGAGAAAACTAGTGAA+AGG | 0.565642 | 7.3:-3668684 | MS.gene072484:CDS |
| CCTTGAAAACTTCTCAACAC+CGG | 0.567703 | 7.3:+3668701 | None:intergenic |
| AACAGCCTCATCTAAATCCA+AGG | 0.573780 | 7.3:-3667882 | MS.gene072484:CDS |
| ACGTTCTTGTGGAAGCAGTA+GGG | 0.575109 | 7.3:-3668998 | MS.gene072484:CDS |
| AAAGTTGATGTAGATGCTGC+TGG | 0.579391 | 7.3:-3668369 | MS.gene072484:CDS |
| TGAATAACAGATGCGAGACA+TGG | 0.579514 | 7.3:+3667958 | None:intergenic |
| ATCGAGGCTTGAGGTAACAT+TGG | 0.580406 | 7.3:+3668508 | None:intergenic |
| CAGCAGGATTCATTTGAAGT+GGG | 0.580828 | 7.3:+3669663 | None:intergenic |
| CAGATAAACTAGGATTCTCT+CGG | 0.581610 | 7.3:-3668257 | MS.gene072484:CDS |
| TCATTGAGAACAAAGGGATG+GGG | 0.582098 | 7.3:-3669502 | MS.gene072484:CDS |
| CTATGCTTGGTGTCGAACCT+GGG | 0.583951 | 7.3:-3668950 | MS.gene072484:CDS |
| AAGTAGAAAACATCTTGTAT+CGG | 0.587062 | 7.3:+3669568 | None:intergenic |
| TTTCAGCATTAACATACCGC+AGG | 0.591478 | 7.3:-3668055 | MS.gene072484:CDS |
| ACAAAGTTGACAGATAAACT+AGG | 0.593475 | 7.3:-3668267 | MS.gene072484:CDS |
| TCATCTTAATCCTTGCTGCA+AGG | 0.595537 | 7.3:-3667746 | MS.gene072484:CDS |
| TGGCCGCGCTTACTAGCAAG+AGG | 0.599467 | 7.3:-3668792 | MS.gene072484:CDS |
| TCGCTCCATGTTTCTGACAT+GGG | 0.605733 | 7.3:+3669593 | None:intergenic |
| ACATCACAAGGAGTTCTATG+AGG | 0.607726 | 7.3:+3667919 | None:intergenic |
| ATTCATTGAGAACAAAGGGA+TGG | 0.610344 | 7.3:-3669504 | MS.gene072484:CDS |
| GTTTACCCATGTCAGAAACA+TGG | 0.611769 | 7.3:-3669598 | MS.gene072484:CDS |
| CATGGGTAAACCAATTGCAT+AGG | 0.615617 | 7.3:+3669610 | None:intergenic |
| ATATTACAATCTTTGACAGG+AGG | 0.616161 | 7.3:-3668864 | MS.gene072484:CDS |
| TGATGGATTTCGTAGATGGT+CGG | 0.616885 | 7.3:-3669441 | MS.gene072484:CDS |
| TGAGATTCTTCAGATACATG+TGG | 0.619350 | 7.3:+3669329 | None:intergenic |
| GTTTCTAAGTCATACGTGGA+AGG | 0.621769 | 7.3:-3669074 | MS.gene072484:CDS |
| CATTGAGAACAAAGGGATGG+GGG | 0.623590 | 7.3:-3669501 | MS.gene072484:CDS |
| AAGTAGAAGATCGAGGCTTG+AGG | 0.632017 | 7.3:+3668499 | None:intergenic |
| GATGCCAGTTTGGCTCATGA+CGG | 0.633667 | 7.3:-3668444 | MS.gene072484:CDS |
| GAGGAAAGTAAACCATAGCA+AGG | 0.636449 | 7.3:-3668319 | MS.gene072484:CDS |
| TTCTTCAGCAAACAGAAATG+TGG | 0.638197 | 7.3:-3668160 | MS.gene072484:CDS |
| CATCCTCTTGCTAGTAAGCG+CGG | 0.640385 | 7.3:+3668789 | None:intergenic |
| ATGGTGGAAGAAGCCAAGCA+GGG | 0.647614 | 7.3:-3667997 | MS.gene072484:CDS |
| CTCAAAGAAGAAGAAGCAGT+CGG | 0.649922 | 7.3:-3668594 | MS.gene072484:CDS |
| TCGAACCTGGGAAGAACAGT+CGG | 0.651934 | 7.3:-3668938 | MS.gene072484:CDS |
| TCCAACGAACCAACATCACA+AGG | 0.651942 | 7.3:+3667907 | None:intergenic |
| AGCAGTCGGTAGCTGCAATG+AGG | 0.651991 | 7.3:-3668580 | MS.gene072484:CDS |
| TGTTATTCAAGAAATAGTTG+AGG | 0.663616 | 7.3:-3667944 | MS.gene072484:CDS |
| AAAGATTGTAATATATCACT+CGG | 0.663784 | 7.3:+3668873 | None:intergenic |
| TCAGAATTCGAAGGAACCTG+CGG | 0.671588 | 7.3:+3668039 | None:intergenic |
| CCATGATCTGAACAATGACG+AGG | 0.689949 | 7.3:+3667697 | None:intergenic |
| TCTGAGCAAACAAAGTATCG+AGG | 0.704395 | 7.3:-3668762 | MS.gene072484:CDS |
| TCAGGTTTCTAAGTCATACG+TGG | 0.707620 | 7.3:-3669078 | MS.gene072484:intron |
| TTACTGTAAGTAGAAGATCG+AGG | 0.716574 | 7.3:+3668492 | None:intergenic |
| ATAAAGGGCACAAATATACG+AGG | 0.729913 | 7.3:-3668338 | MS.gene072484:CDS |
| AATAGGTCCGGAATACCAGG+CGG | 0.777984 | 7.3:-3669720 | MS.gene072484:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATAATTTCATTTTACTA+TGG | - | chr7.3:3667996-3668015 | MS.gene072484:CDS | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.3:3667695-3667714 | MS.gene072484:CDS | 15.0% |
| !!! | TACTTAGTTTGTTTATTTTT+GGG | - | chr7.3:3667925-3667944 | MS.gene072484:CDS | 15.0% |
| !! | AAAGATTGTAATATATCACT+CGG | + | chr7.3:3668605-3668624 | None:intergenic | 20.0% |
| !! | ACCTAATAAAGAAATAAGAT+GGG | + | chr7.3:3668210-3668229 | None:intergenic | 20.0% |
| !!! | CTACTTAGTTTGTTTATTTT+TGG | - | chr7.3:3667924-3667943 | MS.gene072484:CDS | 20.0% |
| !!! | TAAAGAAAAAAGTACTGATA+CGG | + | chr7.3:3668331-3668350 | None:intergenic | 20.0% |
| !!! | TTCTGAAAATAGAAAAATGA+TGG | - | chr7.3:3669453-3669472 | MS.gene072484:CDS | 20.0% |
| ! | AAAAGATTCATTGAGAACAA+AGG | - | chr7.3:3667966-3667985 | MS.gene072484:CDS | 25.0% |
| ! | AAAGATTCATTGAGAACAAA+GGG | - | chr7.3:3667967-3667986 | MS.gene072484:CDS | 25.0% |
| ! | AAATAGAAAAATGATGGCAA+TGG | - | chr7.3:3669459-3669478 | MS.gene072484:CDS | 25.0% |
| ! | AAGTAGAAAACATCTTGTAT+CGG | + | chr7.3:3667910-3667929 | None:intergenic | 25.0% |
| ! | AATAAAGAAATAAGATGGGA+TGG | + | chr7.3:3668206-3668225 | None:intergenic | 25.0% |
| ! | ACTTTACTCACTGAATTAAT+AGG | + | chr7.3:3669091-3669110 | None:intergenic | 25.0% |
| ! | ATAAAGAAATAAGATGGGAT+GGG | + | chr7.3:3668205-3668224 | None:intergenic | 25.0% |
| ! | CACCTAATAAAGAAATAAGA+TGG | + | chr7.3:3668211-3668230 | None:intergenic | 25.0% |
| ! | CTGCTGGTAAAAAATATAAA+GGG | - | chr7.3:3669122-3669141 | MS.gene072484:intron | 25.0% |
| ! | GATATATTACAATCTTTGAC+AGG | - | chr7.3:3668608-3668627 | MS.gene072484:CDS | 25.0% |
| ! | TAAAGATCACATCAAATTCA+TGG | - | chr7.3:3669003-3669022 | MS.gene072484:CDS | 25.0% |
| ! | TAACTGAACCACAAAAAATT+TGG | + | chr7.3:3669267-3669286 | None:intergenic | 25.0% |
| ! | TGTTATTCAAGAAATAGTTG+AGG | - | chr7.3:3669531-3669550 | MS.gene072484:CDS | 25.0% |
| !! | TCCCATCTTATTTCTTTATT+AGG | - | chr7.3:3668206-3668225 | MS.gene072484:CDS | 25.0% |
| !! | TTTCTATTTTCAGAATTCGA+AGG | + | chr7.3:3669448-3669467 | None:intergenic | 25.0% |
| !!! | AAAGAAAAAAGTACTGATAC+GGG | + | chr7.3:3668330-3668349 | None:intergenic | 25.0% |
| AAAAACCAGATAATCATCAG+AGG | + | chr7.3:3668747-3668766 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+TGG | - | chr7.3:3668071-3668090 | MS.gene072484:CDS | 30.0% | |
| AAGGGAGAAAATGTATGATT+GGG | - | chr7.3:3668072-3668091 | MS.gene072484:CDS | 30.0% | |
| AATGAGGAAGAGATAGAAAA+GGG | - | chr7.3:3668911-3668930 | MS.gene072484:CDS | 30.0% | |
| ACAAAGTTGACAGATAAACT+AGG | - | chr7.3:3669208-3669227 | MS.gene072484:intron | 30.0% | |
| ATATTACAATCTTTGACAGG+AGG | - | chr7.3:3668611-3668630 | MS.gene072484:CDS | 30.0% | |
| ATCTCAAGATTCTTTGTTAC+AGG | - | chr7.3:3668163-3668182 | MS.gene072484:CDS | 30.0% | |
| CAAAAGTAATGAACTCTTCT+GGG | - | chr7.3:3668652-3668671 | MS.gene072484:CDS | 30.0% | |
| CTTCTCTGATTTCTTAATCA+AGG | + | chr7.3:3667790-3667809 | None:intergenic | 30.0% | |
| GCTGCTGGTAAAAAATATAA+AGG | - | chr7.3:3669121-3669140 | MS.gene072484:intron | 30.0% | |
| TAACAAATACAAGCAAAGTG+AGG | + | chr7.3:3668374-3668393 | None:intergenic | 30.0% | |
| TACTCCATTGTAATTACCAT+TGG | + | chr7.3:3668253-3668272 | None:intergenic | 30.0% | |
| TCTGATTTCTTAATCAAGGA+AGG | + | chr7.3:3667786-3667805 | None:intergenic | 30.0% | |
| ! | ATTGGGAAGAAACTTTTTAC+CGG | - | chr7.3:3668089-3668108 | MS.gene072484:CDS | 30.0% |
| ! | GGAAAGTTTTACAAATCTGA+TGG | - | chr7.3:3668017-3668036 | MS.gene072484:CDS | 30.0% |
| ! | TGAAAATCTTTTGAATCAGC+AGG | + | chr7.3:3667831-3667850 | None:intergenic | 30.0% |
| ! | TTTTAGACATATCCTTGCTA+TGG | + | chr7.3:3669171-3669190 | None:intergenic | 30.0% |
| !! | TCTTCTTTGAAGTTTACTGT+TGG | - | chr7.3:3668449-3668468 | MS.gene072484:CDS | 30.0% |
| !! | TGCTTGTATTTGTTATACTC+AGG | - | chr7.3:3668379-3668398 | MS.gene072484:CDS | 30.0% |
| !!! | GATGCTAACCAAATTTTTTG+TGG | - | chr7.3:3669256-3669275 | MS.gene072484:intron | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+CGG | - | chr7.3:3668755-3668774 | MS.gene072484:CDS | 30.0% |
| AATCTTTGACAGGAGGATTT+CGG | - | chr7.3:3668618-3668637 | MS.gene072484:CDS | 35.0% | |
| AGCAAGGATTAAGATGATCT+TGG | + | chr7.3:3669726-3669745 | None:intergenic | 35.0% | |
| AGTGCCAATGGTAATTACAA+TGG | - | chr7.3:3668246-3668265 | MS.gene072484:CDS | 35.0% | |
| ATTCATTGAGAACAAAGGGA+TGG | - | chr7.3:3667971-3667990 | MS.gene072484:CDS | 35.0% | |
| CAATGAGGAAGAGATAGAAA+AGG | - | chr7.3:3668910-3668929 | MS.gene072484:CDS | 35.0% | |
| CAGATAAACTAGGATTCTCT+CGG | - | chr7.3:3669218-3669237 | MS.gene072484:intron | 35.0% | |
| CCAAAAGTAATGAACTCTTC+TGG | - | chr7.3:3668651-3668670 | MS.gene072484:CDS | 35.0% | |
| CGCTAACTGAATCAAAGTAA+TGG | + | chr7.3:3668820-3668839 | None:intergenic | 35.0% | |
| GAGATAGAAAAGGGATCAAA+TGG | - | chr7.3:3668920-3668939 | MS.gene072484:CDS | 35.0% | |
| GATAATAGTTCATGTTGCCT+TGG | + | chr7.3:3668116-3668135 | None:intergenic | 35.0% | |
| TAGAAAAATGATGGCAATGG+TGG | - | chr7.3:3669462-3669481 | MS.gene072484:CDS | 35.0% | |
| TCAAGGAGAAAACTAGTGAA+AGG | - | chr7.3:3668791-3668810 | MS.gene072484:CDS | 35.0% | |
| TGAGATTCTTCAGATACATG+TGG | + | chr7.3:3668149-3668168 | None:intergenic | 35.0% | |
| TGCAAAACTTTGTCTTCTCT+TGG | - | chr7.3:3668578-3668597 | MS.gene072484:CDS | 35.0% | |
| TGTTACCTCTGATGATTATC+TGG | - | chr7.3:3668739-3668758 | MS.gene072484:CDS | 35.0% | |
| TGTTGGAATAAACGTTCTTG+TGG | - | chr7.3:3668466-3668485 | MS.gene072484:CDS | 35.0% | |
| TTACTGTAAGTAGAAGATCG+AGG | + | chr7.3:3668986-3669005 | None:intergenic | 35.0% | |
| TTCAATTCCCTTAGATCAGA+TGG | + | chr7.3:3669061-3669080 | None:intergenic | 35.0% | |
| TTCATTGAGAACAAAGGGAT+GGG | - | chr7.3:3667972-3667991 | MS.gene072484:CDS | 35.0% | |
| TTCTTCAGCAAACAGAAATG+TGG | - | chr7.3:3669315-3669334 | MS.gene072484:CDS | 35.0% | |
| ! | ATAAAGGGCACAAATATACG+AGG | - | chr7.3:3669137-3669156 | MS.gene072484:intron | 35.0% |
| ! | CCAGAAGAGTTCATTACTTT+TGG | + | chr7.3:3668654-3668673 | None:intergenic | 35.0% |
| ! | GAAGACAAAGTTTTGCAAGT+TGG | + | chr7.3:3668575-3668594 | None:intergenic | 35.0% |
| ! | TCTTTGAGGACGAGAATATT+CGG | + | chr7.3:3668869-3668888 | None:intergenic | 35.0% |
| !! | AATCTGATGGATTTCGTAGA+TGG | - | chr7.3:3668030-3668049 | MS.gene072484:CDS | 35.0% |
| !!! | TCTTTCCTTTTTTGCCTCTT+TGG | + | chr7.3:3669691-3669710 | None:intergenic | 35.0% |
| AAATCACGCTCCTATGCAAT+TGG | - | chr7.3:3667855-3667874 | MS.gene072484:CDS | 40.0% | |
| AACAGCCTCATCTAAATCCA+AGG | - | chr7.3:3669593-3669612 | MS.gene072484:CDS | 40.0% | |
| AATTCTTGCATGTGCCAAAG+AGG | - | chr7.3:3669674-3669693 | MS.gene072484:CDS | 40.0% | |
| ACATCACAAGGAGTTCTATG+AGG | + | chr7.3:3669559-3669578 | None:intergenic | 40.0% | |
| ACCATTGACAGTTAGAGCAT+TGG | - | chr7.3:3669636-3669655 | MS.gene072484:CDS | 40.0% | |
| AGAAATAAGATGGGATGGGA+TGG | + | chr7.3:3668201-3668220 | None:intergenic | 40.0% | |
| ATGGATCATGCGTCTTATGA+AGG | - | chr7.3:3667714-3667733 | MS.gene072484:CDS | 40.0% | |
| ATGTGCCAAAGAGGCAAAAA+AGG | - | chr7.3:3669683-3669702 | MS.gene072484:CDS | 40.0% | |
| CATAGAACTCCTTGTGATGT+TGG | - | chr7.3:3669559-3669578 | MS.gene072484:CDS | 40.0% | |
| CATGGGTAAACCAATTGCAT+AGG | + | chr7.3:3667868-3667887 | None:intergenic | 40.0% | |
| CCTTGAAAACTTCTCAACAC+CGG | + | chr7.3:3668777-3668796 | None:intergenic | 40.0% | |
| CGGAGTGCATGAAGTTAAAA+GGG | - | chr7.3:3668054-3668073 | MS.gene072484:CDS | 40.0% | |
| CTCAAAGAAGAAGAAGCAGT+CGG | - | chr7.3:3668881-3668900 | MS.gene072484:CDS | 40.0% | |
| CTCGTCATTGTTCAGATCAT+GGG | - | chr7.3:3669779-3669798 | MS.gene072484:CDS | 40.0% | |
| CTTGAAAACTTCTCAACACC+GGG | + | chr7.3:3668776-3668795 | None:intergenic | 40.0% | |
| GAGGAAAGTAAACCATAGCA+AGG | - | chr7.3:3669156-3669175 | MS.gene072484:intron | 40.0% | |
| GTTTACCCATGTCAGAAACA+TGG | - | chr7.3:3667877-3667896 | MS.gene072484:CDS | 40.0% | |
| GTTTCTAAGTCATACGTGGA+AGG | - | chr7.3:3668401-3668420 | MS.gene072484:CDS | 40.0% | |
| TCAGCAGGATTCATTTGAAG+TGG | + | chr7.3:3667816-3667835 | None:intergenic | 40.0% | |
| TCAGGTTTCTAAGTCATACG+TGG | - | chr7.3:3668397-3668416 | MS.gene072484:CDS | 40.0% | |
| TCAGTTAGTCATCAGCAGAA+TGG | - | chr7.3:3669280-3669299 | MS.gene072484:intron | 40.0% | |
| TCATCTTAATCCTTGCTGCA+AGG | - | chr7.3:3669729-3669748 | MS.gene072484:CDS | 40.0% | |
| TCATTGAGAACAAAGGGATG+GGG | - | chr7.3:3667973-3667992 | MS.gene072484:CDS | 40.0% | |
| TCCAATGCTCTAACTGTCAA+TGG | + | chr7.3:3669640-3669659 | None:intergenic | 40.0% | |
| TCGGAGTGCATGAAGTTAAA+AGG | - | chr7.3:3668053-3668072 | MS.gene072484:CDS | 40.0% | |
| TGAATAACAGATGCGAGACA+TGG | + | chr7.3:3669520-3669539 | None:intergenic | 40.0% | |
| TGCTGCAAGGATTGTAAAAG+AGG | - | chr7.3:3669742-3669761 | MS.gene072484:CDS | 40.0% | |
| TGTCTCCTTGGATTTAGATG+AGG | + | chr7.3:3669601-3669620 | None:intergenic | 40.0% | |
| TTTCAGCATTAACATACCGC+AGG | - | chr7.3:3669420-3669439 | MS.gene072484:CDS | 40.0% | |
| TTTCTATTGCTCTGTCTCCT+TGG | + | chr7.3:3669613-3669632 | None:intergenic | 40.0% | |
| ! | AGAAACTTTTTACCGGACCA+AGG | - | chr7.3:3668096-3668115 | MS.gene072484:CDS | 40.0% |
| ! | AGTAGGGATTGGTAACAAGA+AGG | - | chr7.3:3668493-3668512 | MS.gene072484:CDS | 40.0% |
| ! | CAGCAGGATTCATTTGAAGT+GGG | + | chr7.3:3667815-3667834 | None:intergenic | 40.0% |
| ! | CTTTTACAATCCTTGCAGCA+AGG | + | chr7.3:3669742-3669761 | None:intergenic | 40.0% |
| ! | GTAGGGATTGGTAACAAGAA+GGG | - | chr7.3:3668494-3668513 | MS.gene072484:CDS | 40.0% |
| ! | TAAGATGATCTTGGTGTGTC+TGG | + | chr7.3:3669717-3669736 | None:intergenic | 40.0% |
| !! | AAAGTTGATGTAGATGCTGC+TGG | - | chr7.3:3669106-3669125 | MS.gene072484:intron | 40.0% |
| !! | TCTGAGCAAACAAAGTATCG+AGG | - | chr7.3:3668713-3668732 | MS.gene072484:CDS | 40.0% |
| !! | TGATGGATTTCGTAGATGGT+CGG | - | chr7.3:3668034-3668053 | MS.gene072484:CDS | 40.0% |
| !!! | TGTGCTTTTGATAGTGCCAA+TGG | - | chr7.3:3668234-3668253 | MS.gene072484:CDS | 40.0% |
| AACGTTCTTGTGGAAGCAGT+AGG | - | chr7.3:3668476-3668495 | MS.gene072484:CDS | 45.0% | |
| AAGGGAGACCTTACTATGCT+TGG | - | chr7.3:3668512-3668531 | MS.gene072484:CDS | 45.0% | |
| AAGTAGAAGATCGAGGCTTG+AGG | + | chr7.3:3668979-3668998 | None:intergenic | 45.0% | |
| ACGGAAAGCCATCTGATCTA+AGG | - | chr7.3:3669050-3669069 | MS.gene072484:CDS | 45.0% | |
| ACGTTCTTGTGGAAGCAGTA+GGG | - | chr7.3:3668477-3668496 | MS.gene072484:CDS | 45.0% | |
| ATCGAGGCTTGAGGTAACAT+TGG | + | chr7.3:3668970-3668989 | None:intergenic | 45.0% | |
| CATTGAGAACAAAGGGATGG+GGG | - | chr7.3:3667974-3667993 | MS.gene072484:CDS | 45.0% | |
| CCATGATCTGAACAATGACG+AGG | + | chr7.3:3669781-3669800 | None:intergenic | 45.0% | |
| CCTCGTCATTGTTCAGATCA+TGG | - | chr7.3:3669778-3669797 | MS.gene072484:CDS | 45.0% | |
| CGACTGCTTCTTCTTCTTTG+AGG | + | chr7.3:3668883-3668902 | None:intergenic | 45.0% | |
| CGGAAAGCCATCTGATCTAA+GGG | - | chr7.3:3669051-3669070 | MS.gene072484:CDS | 45.0% | |
| CTATTCGAGGACTCGATTCA+AGG | + | chr7.3:3667740-3667759 | None:intergenic | 45.0% | |
| CTTGAATCGAGTCCTCGAAT+AGG | - | chr7.3:3667738-3667757 | MS.gene072484:CDS | 45.0% | |
| GTTCGACACCAAGCATAGTA+AGG | + | chr7.3:3668523-3668542 | None:intergenic | 45.0% | |
| TAGTTCATGTTGCCTTGGTC+CGG | + | chr7.3:3668111-3668130 | None:intergenic | 45.0% | |
| TCAGAATTCGAAGGAACCTG+CGG | + | chr7.3:3669439-3669458 | None:intergenic | 45.0% | |
| TCCAACGAACCAACATCACA+AGG | + | chr7.3:3669571-3669590 | None:intergenic | 45.0% | |
| ! | AACTCTTCTGGGAAGCTGTT+TGG | - | chr7.3:3668663-3668682 | MS.gene072484:CDS | 45.0% |
| ! | ATCGCTCCATGTTTCTGACA+TGG | + | chr7.3:3667886-3667905 | None:intergenic | 45.0% |
| ! | TCGCTCCATGTTTCTGACAT+GGG | + | chr7.3:3667885-3667904 | None:intergenic | 45.0% |
| !! | CCGGTGTTGAGAAGTTTTCA+AGG | - | chr7.3:3668774-3668793 | MS.gene072484:CDS | 45.0% |
| !! | TCCTTGTGATGTTGGTTCGT+TGG | - | chr7.3:3669567-3669586 | MS.gene072484:CDS | 45.0% |
| AATAGGTCCGGAATACCAGG+CGG | - | chr7.3:3667755-3667774 | MS.gene072484:CDS | 50.0% | |
| ATCGAGTCCTCGAATAGGTC+CGG | - | chr7.3:3667743-3667762 | MS.gene072484:CDS | 50.0% | |
| CATCCTCTTGCTAGTAAGCG+CGG | + | chr7.3:3668689-3668708 | None:intergenic | 50.0% | |
| CATGGTTCCTGATGCCAGTT+TGG | - | chr7.3:3669021-3669040 | MS.gene072484:CDS | 50.0% | |
| CTTGTGGAAGCAGTAGGGAT+TGG | - | chr7.3:3668482-3668501 | MS.gene072484:CDS | 50.0% | |
| CTTTCCGTCATGAGCCAAAC+TGG | + | chr7.3:3669038-3669057 | None:intergenic | 50.0% | |
| GGAATTTCCGCCTGGTATTC+CGG | + | chr7.3:3667765-3667784 | None:intergenic | 50.0% | |
| TCAAGGAAGGAATTTCCGCC+TGG | + | chr7.3:3667773-3667792 | None:intergenic | 50.0% | |
| TCATGAGCCAAACTGGCATC+AGG | + | chr7.3:3669031-3669050 | None:intergenic | 50.0% | |
| TCGAACCTGGGAAGAACAGT+CGG | - | chr7.3:3668537-3668556 | MS.gene072484:CDS | 50.0% | |
| TCGAATAGGTCCGGAATACC+AGG | - | chr7.3:3667752-3667771 | MS.gene072484:CDS | 50.0% | |
| TGGTATTCCGGACCTATTCG+AGG | + | chr7.3:3667753-3667772 | None:intergenic | 50.0% | |
| ! | AATGGTGGAAGAAGCCAAGC+AGG | - | chr7.3:3669477-3669496 | MS.gene072484:CDS | 50.0% |
| ! | ATGGTGGAAGAAGCCAAGCA+GGG | - | chr7.3:3669478-3669497 | MS.gene072484:CDS | 50.0% |
| ! | GATGCCAGTTTGGCTCATGA+CGG | - | chr7.3:3669031-3669050 | MS.gene072484:CDS | 50.0% |
| ! | TTTTGCCTTTACGCCCTGCT+TGG | + | chr7.3:3669494-3669513 | None:intergenic | 50.0% |
| !! | ACTATGCTTGGTGTCGAACC+TGG | - | chr7.3:3668524-3668543 | MS.gene072484:CDS | 50.0% |
| !! | CTATGCTTGGTGTCGAACCT+GGG | - | chr7.3:3668525-3668544 | MS.gene072484:CDS | 50.0% |
| AACGTCCGACTGTTCTTCCC+AGG | + | chr7.3:3668545-3668564 | None:intergenic | 55.0% | |
| AGAAGCCAAGCAGGGCGTAA+AGG | - | chr7.3:3669486-3669505 | MS.gene072484:CDS | 55.0% | |
| AGCAGTCGGTAGCTGCAATG+AGG | - | chr7.3:3668895-3668914 | MS.gene072484:CDS | 55.0% | |
| CGCGCTTACTAGCAAGAGGA+TGG | - | chr7.3:3668687-3668706 | MS.gene072484:CDS | 55.0% | |
| TGGCCGCGCTTACTAGCAAG+AGG | - | chr7.3:3668683-3668702 | MS.gene072484:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3667678 | 3669819 | 3667678 | ID=MS.gene072484 |
| chr7.3 | mRNA | 3667678 | 3669819 | 3667678 | ID=MS.gene072484.t1;Parent=MS.gene072484 |
| chr7.3 | exon | 3669313 | 3669819 | 3669313 | ID=MS.gene072484.t1.exon1;Parent=MS.gene072484.t1 |
| chr7.3 | CDS | 3669313 | 3669819 | 3669313 | ID=cds.MS.gene072484.t1;Parent=MS.gene072484.t1 |
| chr7.3 | exon | 3667678 | 3669096 | 3667678 | ID=MS.gene072484.t1.exon2;Parent=MS.gene072484.t1 |
| chr7.3 | CDS | 3667678 | 3669096 | 3667678 | ID=cds.MS.gene072484.t1;Parent=MS.gene072484.t1 |
| Gene Sequence |
| Protein sequence |
