Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78586.t1 | XP_024627185.1 | 90.2 | 762 | 54 | 3 | 1 | 750 | 1 | 753 | 0.00E+00 | 1332.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78586.t1 | G7KYL3 | 90.2 | 762 | 54 | 3 | 1 | 750 | 1 | 753 | 0.0e+00 | 1332.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050891 | MS.gene78586 | 0.924045 | 1.19E-89 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054416 | MS.gene78586 | PPI |
| MS.gene78586 | MS.gene050892 | PPI |
| MS.gene072484 | MS.gene78586 | PPI |
| MS.gene67159 | MS.gene78586 | PPI |
| MS.gene050889 | MS.gene78586 | PPI |
| MS.gene78586 | MS.gene072482 | PPI |
| MS.gene053360 | MS.gene78586 | PPI |
| MS.gene072482 | MS.gene78586 | PPI |
| MS.gene072481 | MS.gene78586 | PPI |
| MS.gene072542 | MS.gene78586 | PPI |
| MS.gene78588 | MS.gene78586 | PPI |
| MS.gene072483 | MS.gene78586 | PPI |
| MS.gene29350 | MS.gene78586 | PPI |
| MS.gene78584 | MS.gene78586 | PPI |
| MS.gene050891 | MS.gene78586 | PPI |
| MS.gene78586 | MS.gene050891 | PPI |
| MS.gene29352 | MS.gene78586 | PPI |
| MS.gene050738 | MS.gene78586 | PPI |
| MS.gene063225 | MS.gene78586 | PPI |
| MS.gene072485 | MS.gene78586 | PPI |
| MS.gene050890 | MS.gene78586 | PPI |
| MS.gene050892 | MS.gene78586 | PPI |
| MS.gene78586 | MS.gene072485 | PPI |
| MS.gene65461 | MS.gene78586 | PPI |
| MS.gene78587 | MS.gene78586 | PPI |
| MS.gene050893 | MS.gene78586 | PPI |
| MS.gene29351 | MS.gene78586 | PPI |
| MS.gene050942 | MS.gene78586 | PPI |
| MS.gene78585 | MS.gene78586 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78586.t1 | MTR_7g113270 | 92.388 | 762 | 41 | 3 | 1 | 750 | 1 | 757 | 0.0 | 1382 |
| MS.gene78586.t1 | MTR_7g113220 | 90.157 | 762 | 54 | 3 | 1 | 750 | 1 | 753 | 0.0 | 1346 |
| MS.gene78586.t1 | MTR_1g041895 | 69.004 | 813 | 185 | 11 | 1 | 750 | 1 | 809 | 0.0 | 1036 |
| MS.gene78586.t1 | MTR_7g113280 | 69.353 | 757 | 204 | 9 | 1 | 734 | 1 | 752 | 0.0 | 998 |
| MS.gene78586.t1 | MTR_7g113250 | 76.212 | 433 | 91 | 2 | 13 | 433 | 1 | 433 | 0.0 | 666 |
| MS.gene78586.t1 | MTR_7g113250 | 70.115 | 174 | 51 | 1 | 575 | 747 | 436 | 609 | 1.08e-70 | 243 |
| MS.gene78586.t1 | MTR_7g112390 | 60.390 | 462 | 97 | 7 | 105 | 554 | 1 | 388 | 1.55e-157 | 474 |
| MS.gene78586.t1 | MTR_7g112390 | 62.025 | 237 | 46 | 6 | 524 | 750 | 472 | 674 | 2.30e-71 | 247 |
| MS.gene78586.t1 | MTR_7g108470 | 46.608 | 339 | 163 | 4 | 67 | 389 | 139 | 475 | 4.07e-91 | 306 |
| MS.gene78586.t1 | MTR_3g049350 | 63.415 | 246 | 68 | 4 | 265 | 508 | 3 | 228 | 6.99e-87 | 275 |
| MS.gene78586.t1 | MTR_3g049350 | 64.000 | 75 | 26 | 1 | 575 | 648 | 174 | 248 | 2.09e-21 | 95.1 |
| MS.gene78586.t1 | MTR_4g119630 | 41.962 | 367 | 155 | 8 | 20 | 335 | 38 | 397 | 2.35e-79 | 262 |
| MS.gene78586.t1 | MTR_2g436970 | 39.308 | 318 | 166 | 11 | 13 | 316 | 4 | 308 | 3.55e-58 | 204 |
| MS.gene78586.t1 | MTR_7g113290 | 65.289 | 121 | 35 | 3 | 512 | 625 | 7 | 127 | 2.06e-37 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78586.t1 | AT1G09040 | 35.501 | 738 | 358 | 23 | 50 | 724 | 122 | 804 | 7.18e-103 | 337 |
| MS.gene78586.t1 | AT1G09050 | 49.851 | 335 | 143 | 5 | 71 | 385 | 143 | 472 | 1.96e-92 | 309 |
| MS.gene78586.t1 | AT1G09050 | 49.851 | 335 | 143 | 5 | 71 | 385 | 143 | 472 | 1.96e-92 | 309 |
| MS.gene78586.t1 | AT2G47820 | 37.174 | 460 | 198 | 13 | 19 | 392 | 31 | 485 | 1.40e-78 | 269 |
| MS.gene78586.t1 | AT2G47820 | 37.174 | 460 | 198 | 13 | 19 | 392 | 31 | 485 | 1.40e-78 | 269 |
| MS.gene78586.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 9.60e-77 | 266 |
| MS.gene78586.t1 | AT1G55050 | 46.866 | 335 | 145 | 7 | 71 | 386 | 126 | 446 | 9.60e-77 | 266 |
Find 153 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGATTTCAAAGTCGTTTA+TGG | 0.134164 | 7.4:-3506749 | MS.gene78586:intron |
| GCGGAAAGTCATCTGCTTTA+AGG | 0.171768 | 7.4:-3506093 | MS.gene78586:CDS |
| ATCATTATAATTCTGGTTAA+AGG | 0.201090 | 7.4:+3507999 | None:intergenic |
| TGAAAATATCATTATAATTC+TGG | 0.213867 | 7.4:+3507992 | None:intergenic |
| CTTTGCCGACTTCTGTTTAA+TGG | 0.228638 | 7.4:+3505952 | None:intergenic |
| CCCTTGTGATGTTGGTTCTT+TGG | 0.241349 | 7.4:-3505162 | MS.gene78586:CDS |
| CGCATTGTTGAGAATTCTTC+AGG | 0.254199 | 7.4:-3505527 | MS.gene78586:CDS |
| CCAAAAGTAATGATCTCTTC+TGG | 0.256574 | 7.4:-3506498 | MS.gene78586:CDS |
| TGTTACCTCCAATGATTATC+TGG | 0.258416 | 7.4:-3506410 | MS.gene78586:CDS |
| TCCAATGCTCTAACTGTTAA+TGG | 0.262771 | 7.4:+3505092 | None:intergenic |
| GTCAATTTCCTCCGTTTAAT+AGG | 0.265888 | 7.4:+3505575 | None:intergenic |
| AGCTGTTTGGCCTCGCTTGC+TGG | 0.271118 | 7.4:-3506473 | MS.gene78586:CDS |
| TTCAATATTTGACAGGATTT+CGG | 0.272657 | 7.4:-3506531 | MS.gene78586:CDS |
| TAGTTGGACCACAAACATTT+TGG | 0.284443 | 7.4:+3505462 | None:intergenic |
| TGCAAAGCTTTGTCTTCTCT+TGG | 0.309396 | 7.4:-3506568 | MS.gene78586:CDS |
| ATCTCTTCTGGGAAGCTGTT+TGG | 0.318789 | 7.4:-3506486 | MS.gene78586:CDS |
| GTTGCCTCGGTCCGGCAAAA+AGG | 0.319814 | 7.4:+3507584 | None:intergenic |
| CCAGAAGAGATCATTACTTT+TGG | 0.323183 | 7.4:+3506498 | None:intergenic |
| ACTTTAGGCACTGAATTAAC+AGG | 0.335113 | 7.4:+3506055 | None:intergenic |
| TGAAAGGATCTTGGTGTGTC+TGG | 0.338299 | 7.4:+3505015 | None:intergenic |
| TCTTTGAGCACGAGAATATT+CGG | 0.365137 | 7.4:+3506283 | None:intergenic |
| CGGAAAGTCATCTGCTTTAA+GGG | 0.369059 | 7.4:-3506092 | MS.gene78586:CDS |
| CATGGTTATTGATACCAGTT+TGG | 0.371834 | 7.4:-3506122 | MS.gene78586:CDS |
| CCTATTCGAGGACTGAATTC+AGG | 0.372601 | 7.4:+3507946 | None:intergenic |
| TGCTTCTCGGGAAGTGGTTA+AGG | 0.374030 | 7.4:-3505198 | MS.gene78586:CDS |
| CTCATTGCAGCTACCAACTT+TGG | 0.379784 | 7.4:+3506249 | None:intergenic |
| TGTCTCCTCGGATTCATATC+AGG | 0.382635 | 7.4:+3505131 | None:intergenic |
| AATGAGGAAGAGCCAGAAAA+TGG | 0.392377 | 7.4:-3506232 | MS.gene78586:CDS |
| TAAAGATCATATCAAATTCA+TGG | 0.393568 | 7.4:-3506140 | MS.gene78586:CDS |
| CACCTCTGCACCCATCAGTT+TGG | 0.395218 | 7.4:+3505723 | None:intergenic |
| GAGAATTCTTCAGGATGTTT+AGG | 0.396514 | 7.4:-3505518 | MS.gene78586:CDS |
| ACTAGGCTTGGCATGGAACC+TGG | 0.407506 | 7.4:-3506622 | MS.gene78586:CDS |
| CATGTCTAACATCTGCTTCT+CGG | 0.417095 | 7.4:-3505211 | MS.gene78586:CDS |
| TGGTCTTCTGAGAGATAGTA+AGG | 0.418389 | 7.4:-3505819 | MS.gene78586:CDS |
| CTCTTAGCTTCCACCTTCCT+CGG | 0.419232 | 7.4:+3505773 | None:intergenic |
| AAAGGGAGAAAATGTATGAT+AGG | 0.419409 | 7.4:-3507613 | MS.gene78586:CDS |
| TCATTCTGCTGATGACTAGT+TGG | 0.422211 | 7.4:+3505446 | None:intergenic |
| CTTTAGGCCTTGCTCATCTT+CGG | 0.428940 | 7.4:+3505244 | None:intergenic |
| CAAAAGTAATGATCTCTTCT+GGG | 0.437354 | 7.4:-3506497 | MS.gene78586:CDS |
| TCTGATTTCACAATCATAGA+AGG | 0.440778 | 7.4:+3507901 | None:intergenic |
| GAAGCATCTTCTAATTCAAC+TGG | 0.445905 | 7.4:+3505854 | None:intergenic |
| CTTTCCGCCATGCACCAAAC+TGG | 0.447484 | 7.4:+3506108 | None:intergenic |
| ATGCAGCTGTTCCTATTAAA+CGG | 0.448083 | 7.4:-3505586 | MS.gene78586:CDS |
| CAGGATGTTTAGGCTTCTCT+CGG | 0.448262 | 7.4:-3505508 | MS.gene78586:CDS |
| ATGTCTAACATCTGCTTCTC+GGG | 0.448570 | 7.4:-3505210 | MS.gene78586:CDS |
| GTAACATAGCCTCGATACTT+TGG | 0.448775 | 7.4:+3506427 | None:intergenic |
| TTTACTGTAAGTAGAAGATC+GGG | 0.451792 | 7.4:+3506159 | None:intergenic |
| CCTGAATTCAGTCCTCGAAT+AGG | 0.459730 | 7.4:-3507946 | MS.gene78586:CDS |
| GAGATAATTCAATATTTGAC+AGG | 0.461702 | 7.4:-3506538 | MS.gene78586:CDS |
| AAACTGATGGATATCTTAGA+TGG | 0.462004 | 7.4:-3507654 | MS.gene78586:CDS |
| ATCTTAGATGGTCGAAGTGC+AGG | 0.466134 | 7.4:-3507642 | MS.gene78586:CDS |
| CTCGCTTGCTGGCAAGAGGT+TGG | 0.466892 | 7.4:-3506462 | MS.gene78586:CDS |
| TTGAGAATCCCTTGTGATGT+TGG | 0.468399 | 7.4:-3505170 | MS.gene78586:CDS |
| GTAGGTATTGGTAAGGAGAA+GGG | 0.470337 | 7.4:-3506652 | MS.gene78586:CDS |
| AGCAGACAGAAGTGTGGAAG+AGG | 0.472115 | 7.4:-3505408 | MS.gene78586:CDS |
| GACTCATTCGAAGCGAAAGC+TGG | 0.474737 | 7.4:+3507878 | None:intergenic |
| AACAATTCACCGAGAACAAA+GGG | 0.476097 | 7.4:-3507717 | MS.gene78586:CDS |
| GATGCAAACCAAAATGTTTG+TGG | 0.482630 | 7.4:-3505470 | MS.gene78586:CDS |
| CTTGTGGAAGCTGTAGGTAT+TGG | 0.483654 | 7.4:-3506664 | MS.gene78586:CDS |
| TAGTTCATGTTGCCTCGGTC+CGG | 0.493742 | 7.4:+3507576 | None:intergenic |
| AAAGCTTTGCAAGCTGGTGC+AGG | 0.494056 | 7.4:+3506580 | None:intergenic |
| AACGCTTGAACGTCCTTCCC+AGG | 0.495754 | 7.4:+3506604 | None:intergenic |
| TTTCTAGAGCTCTGTCTCCT+CGG | 0.499320 | 7.4:+3505119 | None:intergenic |
| GAAGACAAAGCTTTGCAAGC+TGG | 0.500111 | 7.4:+3506574 | None:intergenic |
| CCAACATCTACCTCCACTTT+AGG | 0.500316 | 7.4:+3506040 | None:intergenic |
| GTTCCATGCCAAGCCTAGTA+AGG | 0.502669 | 7.4:+3506626 | None:intergenic |
| GGCAAGGACTGAAAGGATCT+TGG | 0.502833 | 7.4:+3505006 | None:intergenic |
| AACATCTGCTTCTCGGGAAG+TGG | 0.504803 | 7.4:-3505204 | MS.gene78586:CDS |
| CGAAGATGAGCAAGGCCTAA+AGG | 0.505503 | 7.4:-3505243 | MS.gene78586:CDS |
| CTTTACTGTAAGTAGAAGAT+CGG | 0.506445 | 7.4:+3506158 | None:intergenic |
| ACCATTAACAGTTAGAGCAT+TGG | 0.508438 | 7.4:-3505093 | MS.gene78586:CDS |
| AATTGATGATTCACCGAGGA+AGG | 0.510840 | 7.4:-3505786 | MS.gene78586:CDS |
| ATCACTCCATGTGTCTGAGA+TGG | 0.517171 | 7.4:+3507801 | None:intergenic |
| TTCATGGACCATACGTCTGA+TGG | 0.518088 | 7.4:-3507973 | MS.gene78586:CDS |
| TCGAATAGGTCATGCATACC+AGG | 0.522827 | 7.4:-3507932 | MS.gene78586:CDS |
| CTTGAAAACTTCTCAACACC+AGG | 0.523291 | 7.4:+3506376 | None:intergenic |
| CAACCTCTTGCCAGCAAGCG+AGG | 0.527263 | 7.4:+3506463 | None:intergenic |
| TCAAGGAGAAAACTTGTGAA+AGG | 0.529448 | 7.4:-3506358 | MS.gene78586:CDS |
| ATTGATACCAGTTTGGTGCA+TGG | 0.532780 | 7.4:-3506115 | MS.gene78586:CDS |
| TTGAAGTCTACTGTTGAACT+TGG | 0.533877 | 7.4:-3506691 | MS.gene78586:CDS |
| GAAGAAGAAGAAGCCAAAGT+TGG | 0.537968 | 7.4:-3506262 | MS.gene78586:CDS |
| TCCTTTCAGTCCTTGCCGCA+AGG | 0.543859 | 7.4:-3505000 | MS.gene78586:CDS |
| TGTAGGTATTGGTAAGGAGA+AGG | 0.546396 | 7.4:-3506653 | MS.gene78586:CDS |
| TGTTAATTCAGTGCCTAAAG+TGG | 0.547470 | 7.4:-3506053 | MS.gene78586:CDS |
| TGAACATCTTCTGAATCAGC+AGG | 0.549114 | 7.4:+3507856 | None:intergenic |
| CTAGGCTTGGCATGGAACCT+GGG | 0.550586 | 7.4:-3506621 | MS.gene78586:CDS |
| GCTTGGCATGGAACCTGGGA+AGG | 0.551229 | 7.4:-3506617 | MS.gene78586:CDS |
| TTTCACCTTCAACATACCTC+AGG | 0.551354 | 7.4:-3505309 | MS.gene78586:CDS |
| TTCAATCAGAGAGTTAGATC+AGG | 0.551942 | 7.4:-3505620 | MS.gene78586:CDS |
| TGTTGAACTTGGCGTACTTG+TGG | 0.555243 | 7.4:-3506680 | MS.gene78586:CDS |
| CGAGGAAGGTGGAAGCTAAG+AGG | 0.555775 | 7.4:-3505772 | MS.gene78586:CDS |
| TGGCCTCGCTTGCTGGCAAG+AGG | 0.555857 | 7.4:-3506466 | MS.gene78586:CDS |
| GACAATAGTTCATGTTGCCT+CGG | 0.558165 | 7.4:+3507571 | None:intergenic |
| TCACTCCATGTGTCTGAGAT+GGG | 0.562681 | 7.4:+3507802 | None:intergenic |
| TTCACCGAGAACAAAGGGAT+GGG | 0.565277 | 7.4:-3507712 | MS.gene78586:CDS |
| GCCTTGCGGCAAGGACTGAA+AGG | 0.566399 | 7.4:+3504999 | None:intergenic |
| TAGGTATTGGTAAGGAGAAG+GGG | 0.566837 | 7.4:-3506651 | MS.gene78586:CDS |
| GGAAGCTGTAGGTATTGGTA+AGG | 0.569902 | 7.4:-3506659 | MS.gene78586:CDS |
| TGGTATGCATGACCTATTCG+AGG | 0.570623 | 7.4:+3507934 | None:intergenic |
| AAAATATCAACCAAACTGAT+GGG | 0.570703 | 7.4:-3505733 | MS.gene78586:CDS |
| TCACCGAGAACAAAGGGATG+GGG | 0.571170 | 7.4:-3507711 | MS.gene78586:CDS |
| GATGCTTCTACGATGACTAC+TGG | 0.571992 | 7.4:-3505839 | MS.gene78586:CDS |
| CATGTACGAGCCTTGCGGCA+AGG | 0.572654 | 7.4:+3504990 | None:intergenic |
| GGACCTTACTAGGCTTGGCA+TGG | 0.573430 | 7.4:-3506629 | MS.gene78586:CDS |
| CGAGAAGCAGATGTTAGACA+TGG | 0.576793 | 7.4:+3505212 | None:intergenic |
| CAGGATCTCCATCAGACGTA+TGG | 0.578249 | 7.4:+3507965 | None:intergenic |
| TGCCGCAAGGCTCGTACATG+AGG | 0.578280 | 7.4:-3504987 | None:intergenic |
| ATTTCAAAGTCGTTTATGGA+GGG | 0.578872 | 7.4:-3506745 | MS.gene78586:CDS |
| CACTAACAGAATCAAAGTAA+TGG | 0.579542 | 7.4:+3506332 | None:intergenic |
| TAAAACCATTAAACAGAAGT+CGG | 0.581290 | 7.4:-3505957 | MS.gene78586:CDS |
| AAATATTGAATTATCTCACT+AGG | 0.581479 | 7.4:+3506544 | None:intergenic |
| GATTTCAAAGTCGTTTATGG+AGG | 0.583379 | 7.4:-3506746 | MS.gene78586:CDS |
| TGATGATTCACCGAGGAAGG+TGG | 0.590215 | 7.4:-3505783 | MS.gene78586:CDS |
| GATACCAATAGACTTTCTGA+AGG | 0.590512 | 7.4:-3505917 | MS.gene78586:CDS |
| AAATAGCAAAACAGTAGCAA+TGG | 0.591008 | 7.4:-3505270 | MS.gene78586:CDS |
| TCATAGAAGGAATTTCCGCC+TGG | 0.592210 | 7.4:+3507914 | None:intergenic |
| AAGTAGAAGATCGGGGCTTG+AGG | 0.596284 | 7.4:+3506167 | None:intergenic |
| AAACAATTCACCGAGAACAA+AGG | 0.596800 | 7.4:-3507718 | MS.gene78586:CDS |
| ATGGCAGCCGAAGATGAGCA+AGG | 0.597264 | 7.4:-3505251 | MS.gene78586:CDS |
| GATGGGTAAATCAATTGCAA+AGG | 0.601126 | 7.4:+3507819 | None:intergenic |
| ATGCTCTAACTGTTAATGGT+CGG | 0.603464 | 7.4:+3505096 | None:intergenic |
| TCCAAAGAACCAACATCACA+AGG | 0.604418 | 7.4:+3505161 | None:intergenic |
| CACCGAGAACAAAGGGATGG+GGG | 0.606182 | 7.4:-3507710 | MS.gene78586:CDS |
| ATTCACCGAGAACAAAGGGA+TGG | 0.612425 | 7.4:-3507713 | MS.gene78586:CDS |
| TCAAAGTCGTTTATGGAGGG+CGG | 0.617461 | 7.4:-3506742 | MS.gene78586:CDS |
| TGGTGCCTGAGGTATGTTGA+AGG | 0.618245 | 7.4:+3505304 | None:intergenic |
| AGGGCTTAAATATACGAGGA+AGG | 0.621529 | 7.4:-3506002 | MS.gene78586:CDS |
| TGCCTCATGTACGAGCCTTG+CGG | 0.621550 | 7.4:+3504985 | None:intergenic |
| TCAGACTTCGATGGTGCCTG+AGG | 0.621736 | 7.4:+3505293 | None:intergenic |
| AACCAAACTGATGGGTGCAG+AGG | 0.625427 | 7.4:-3505725 | MS.gene78586:CDS |
| ATTTACCCATCTCAGACACA+TGG | 0.629487 | 7.4:-3507807 | MS.gene78586:CDS |
| ACATCACAAGGGATTCTCAA+AGG | 0.640112 | 7.4:+3505173 | None:intergenic |
| GAGGAAGGTAAACCATAGCA+AGG | 0.643269 | 7.4:-3505987 | MS.gene78586:CDS |
| CAAAGTTGGTAGCTGCAATG+AGG | 0.643587 | 7.4:-3506248 | MS.gene78586:CDS |
| TAATTCAGTGCCTAAAGTGG+AGG | 0.644027 | 7.4:-3506050 | MS.gene78586:CDS |
| GGTCTTCTGAGAGATAGTAA+GGG | 0.645473 | 7.4:-3505818 | MS.gene78586:CDS |
| CTTCTGAGAGATAGTAAGGG+TGG | 0.653143 | 7.4:-3505815 | MS.gene78586:CDS |
| GGCGTACTTGTGGAAGCTGT+AGG | 0.654942 | 7.4:-3506670 | MS.gene78586:CDS |
| CCTAAAGTGGAGGTAGATGT+TGG | 0.657169 | 7.4:-3506040 | MS.gene78586:CDS |
| AACAGCCTGATATGAATCCG+AGG | 0.663816 | 7.4:-3505136 | MS.gene78586:CDS |
| TTCTTCAGCAGACAGAAGTG+TGG | 0.665376 | 7.4:-3505414 | MS.gene78586:CDS |
| GATACCAGTTTGGTGCATGG+CGG | 0.678268 | 7.4:-3506112 | MS.gene78586:CDS |
| TCTGAGCAACCAAAGTATCG+AGG | 0.695852 | 7.4:-3506436 | MS.gene78586:CDS |
| AGGTATTGGTAAGGAGAAGG+GGG | 0.711130 | 7.4:-3506650 | MS.gene78586:CDS |
| CAGCTGTTCCTATTAAACGG+AGG | 0.715033 | 7.4:-3505583 | MS.gene78586:CDS |
| TGCAGAGGTGTATCTAACAG+TGG | 0.716698 | 7.4:-3505710 | MS.gene78586:CDS |
| ATAAAGGGCTTAAATATACG+AGG | 0.718352 | 7.4:-3506006 | MS.gene78586:CDS |
| CTGAAGAATTCTCAACAATG+CGG | 0.718373 | 7.4:+3505528 | None:intergenic |
| CCAAAGAACCAACATCACAA+GGG | 0.720186 | 7.4:+3505162 | None:intergenic |
| TTACTGTAAGTAGAAGATCG+GGG | 0.727493 | 7.4:+3506160 | None:intergenic |
| TTGATAATAATCAATTGACG+AGG | 0.738361 | 7.4:-3505658 | MS.gene78586:CDS |
| AATAGGTCATGCATACCAGG+CGG | 0.749167 | 7.4:-3507929 | MS.gene78586:CDS |
| CTTCAATTGATGATTCACCG+AGG | 0.774642 | 7.4:-3505790 | MS.gene78586:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAAT+TGG | + | chr7.4:3506143-3506162 | None:intergenic | 0.0% |
| !! | TGAAAATATCATTATAATTC+TGG | + | chr7.4:3505006-3505025 | None:intergenic | 15.0% |
| !! | TTGGTTGTAAAAAATATAAA+GGG | - | chr7.4:3506974-3506993 | MS.gene78586:intron | 15.0% |
| !!! | GAATTATAATGATATTTTCA+TGG | - | chr7.4:3505006-3505025 | MS.gene78586:CDS | 15.0% |
| !! | AAATATTGAATTATCTCACT+AGG | + | chr7.4:3506454-3506473 | None:intergenic | 20.0% |
| !! | CATAGAACTTCAAATAATTA+TGG | + | chr7.4:3506088-3506107 | None:intergenic | 20.0% |
| !! | GTTAATAAATCTGCAAAATA+TGG | + | chr7.4:3505823-3505842 | None:intergenic | 20.0% |
| !! | GTTGGTTGTAAAAAATATAA+AGG | - | chr7.4:3506973-3506992 | MS.gene78586:intron | 20.0% |
| !! | TAAAGATCATATCAAATTCA+TGG | - | chr7.4:3506855-3506874 | MS.gene78586:intron | 20.0% |
| !!! | AAGGCTATATTTAAAATTAC+AGG | + | chr7.4:3505695-3505714 | None:intergenic | 20.0% |
| !!! | ATCATTATAATTCTGGTTAA+AGG | + | chr7.4:3504999-3505018 | None:intergenic | 20.0% |
| !!! | GAAATACTTTCATTTTACTA+TGG | - | chr7.4:3505307-3505326 | MS.gene78586:CDS | 20.0% |
| ! | AAAAATATCAACCAAACTGA+TGG | - | chr7.4:3507261-3507280 | MS.gene78586:intron | 25.0% |
| ! | AAAATATCAACCAAACTGAT+GGG | - | chr7.4:3507262-3507281 | MS.gene78586:intron | 25.0% |
| ! | AAGAAAAACCAGATAATCAT+TGG | + | chr7.4:3506596-3506615 | None:intergenic | 25.0% |
| ! | AATAAAAGTCACTAGGAATA+AGG | - | chr7.4:3505853-3505872 | MS.gene78586:CDS | 25.0% |
| ! | ATAAAAGTCACTAGGAATAA+GGG | - | chr7.4:3505854-3505873 | MS.gene78586:CDS | 25.0% |
| ! | ATGCAATTCATTAACAATAG+AGG | + | chr7.4:3505529-3505548 | None:intergenic | 25.0% |
| ! | GAGATAATTCAATATTTGAC+AGG | - | chr7.4:3506457-3506476 | MS.gene78586:CDS | 25.0% |
| ! | GTAAAAGAATAAAAGTCACT+AGG | - | chr7.4:3505846-3505865 | MS.gene78586:CDS | 25.0% |
| ! | GTATAAATATAAGCAAAGTG+AGG | + | chr7.4:3506226-3506245 | None:intergenic | 25.0% |
| ! | TAAAACCATTAAACAGAAGT+CGG | - | chr7.4:3507038-3507057 | MS.gene78586:intron | 25.0% |
| ! | TAGTTACAATGTAATTACGA+TGG | - | chr7.4:3506027-3506046 | MS.gene78586:CDS | 25.0% |
| ! | TGGAGTGATTTAAAGAAAAA+GGG | + | chr7.4:3506123-3506142 | None:intergenic | 25.0% |
| ! | TTCAATATTTGACAGGATTT+CGG | - | chr7.4:3506464-3506483 | MS.gene78586:CDS | 25.0% |
| ! | TTGGAGTGATTTAAAGAAAA+AGG | + | chr7.4:3506124-3506143 | None:intergenic | 25.0% |
| !! | ATTATCATGTGTCTTTTTAC+TGG | + | chr7.4:3507316-3507335 | None:intergenic | 25.0% |
| !! | ATTTTGCTTTAACAGTAATC+TGG | - | chr7.4:3505761-3505780 | MS.gene78586:CDS | 25.0% |
| !! | GTGACTTTTATTCTTTTACA+TGG | + | chr7.4:3505845-3505864 | None:intergenic | 25.0% |
| !! | TTGATAATAATCAATTGACG+AGG | - | chr7.4:3507337-3507356 | MS.gene78586:intron | 25.0% |
| !!! | GATACAAATAGTTTTGTACT+AGG | - | chr7.4:3505220-3505239 | MS.gene78586:CDS | 25.0% |
| !!! | GTACTAGGTTTGTTTATTTT+CGG | - | chr7.4:3505235-3505254 | MS.gene78586:CDS | 25.0% |
| !!! | TACTAGGTTTGTTTATTTTC+GGG | - | chr7.4:3505236-3505255 | MS.gene78586:CDS | 25.0% |
| AAAAACCAGATAATCATTGG+AGG | + | chr7.4:3506593-3506612 | None:intergenic | 30.0% | |
| AAAGGGAGAAAATGTATGAT+AGG | - | chr7.4:3505382-3505401 | MS.gene78586:CDS | 30.0% | |
| AAATAGCAAAACAGTAGCAA+TGG | - | chr7.4:3507725-3507744 | MS.gene78586:CDS | 30.0% | |
| AATATTATCACACTTCGAGA+AGG | + | chr7.4:3505727-3505746 | None:intergenic | 30.0% | |
| ACAGATTTCAAAGTCGTTTA+TGG | - | chr7.4:3506246-3506265 | MS.gene78586:CDS | 30.0% | |
| ACCACTAAATGTGATCATAT+AGG | + | chr7.4:3505586-3505605 | None:intergenic | 30.0% | |
| ACTAGCAAAGAAATTCACAT+TGG | + | chr7.4:3505655-3505674 | None:intergenic | 30.0% | |
| ATAAAGGGCTTAAATATACG+AGG | - | chr7.4:3506989-3507008 | MS.gene78586:intron | 30.0% | |
| ATTTCAAAGTCGTTTATGGA+GGG | - | chr7.4:3506250-3506269 | MS.gene78586:CDS | 30.0% | |
| CAAAAGTAATGATCTCTTCT+GGG | - | chr7.4:3506498-3506517 | MS.gene78586:CDS | 30.0% | |
| CAAATAATTATGGTATGTCG+CGG | + | chr7.4:3506078-3506097 | None:intergenic | 30.0% | |
| CACTAACAGAATCAAAGTAA+TGG | + | chr7.4:3506666-3506685 | None:intergenic | 30.0% | |
| CTTTACTGTAAGTAGAAGAT+CGG | + | chr7.4:3506840-3506859 | None:intergenic | 30.0% | |
| TAAGGGACTAAATTATCTGT+TGG | - | chr7.4:3505871-3505890 | MS.gene78586:CDS | 30.0% | |
| TCTGATTTCACAATCATAGA+AGG | + | chr7.4:3505097-3505116 | None:intergenic | 30.0% | |
| TTTACTGTAAGTAGAAGATC+GGG | + | chr7.4:3506839-3506858 | None:intergenic | 30.0% | |
| ! | AAACTGATGGATATCTTAGA+TGG | - | chr7.4:3505341-3505360 | MS.gene78586:CDS | 30.0% |
| ! | GACTTCTGTTTAATGGTTTT+AGG | + | chr7.4:3507039-3507058 | None:intergenic | 30.0% |
| ! | GATTTAAAGAAAAAGGGTAC+TGG | + | chr7.4:3506117-3506136 | None:intergenic | 30.0% |
| ! | GGAAAGTTTTACAAAACTGA+TGG | - | chr7.4:3505328-3505347 | MS.gene78586:CDS | 30.0% |
| ! | TAACAGTAATCTGGTTTATG+TGG | - | chr7.4:3505770-3505789 | MS.gene78586:CDS | 30.0% |
| ! | TCTTCATTTGATCCATTTTC+TGG | + | chr7.4:3506778-3506797 | None:intergenic | 30.0% |
| ! | TCTTTCTTTTTCTGTCTCTT+TGG | + | chr7.4:3507957-3507976 | None:intergenic | 30.0% |
| ! | TTTTCCTTCAGAAAGTCTAT+TGG | + | chr7.4:3507085-3507104 | None:intergenic | 30.0% |
| !! | TGCATTTTATTTATGAGCTC+CGG | - | chr7.4:3505897-3505916 | MS.gene78586:CDS | 30.0% |
| !!! | TATCTGGTTTTTCTTATTCC+TGG | - | chr7.4:3506601-3506620 | MS.gene78586:CDS | 30.0% |
| AAACAATTCACCGAGAACAA+AGG | - | chr7.4:3505277-3505296 | MS.gene78586:CDS | 35.0% | |
| AACAATTCACCGAGAACAAA+GGG | - | chr7.4:3505278-3505297 | MS.gene78586:CDS | 35.0% | |
| ACCATTAACAGTTAGAGCAT+TGG | - | chr7.4:3507902-3507921 | MS.gene78586:CDS | 35.0% | |
| ATGCAGCTGTTCCTATTAAA+CGG | - | chr7.4:3507409-3507428 | MS.gene78586:intron | 35.0% | |
| ATGCTCTAACTGTTAATGGT+CGG | + | chr7.4:3507902-3507921 | None:intergenic | 35.0% | |
| ATTCCATTTGTCTGACAGAT+TGG | - | chr7.4:3505555-3505574 | MS.gene78586:CDS | 35.0% | |
| CATGGTTATTGATACCAGTT+TGG | - | chr7.4:3506873-3506892 | MS.gene78586:intron | 35.0% | |
| CCAAAAGTAATGATCTCTTC+TGG | - | chr7.4:3506497-3506516 | MS.gene78586:CDS | 35.0% | |
| CGGTAAAATGATAATTCGCT+CGG | + | chr7.4:3506058-3506077 | None:intergenic | 35.0% | |
| CTGAAGAATTCTCAACAATG+CGG | + | chr7.4:3507470-3507489 | None:intergenic | 35.0% | |
| GAGAATTCTTCAGGATGTTT+AGG | - | chr7.4:3507477-3507496 | MS.gene78586:intron | 35.0% | |
| GATACCAATAGACTTTCTGA+AGG | - | chr7.4:3507078-3507097 | MS.gene78586:intron | 35.0% | |
| GATGCAAACCAAAATGTTTG+TGG | - | chr7.4:3507525-3507544 | MS.gene78586:intron | 35.0% | |
| GATGGGTAAATCAATTGCAA+AGG | + | chr7.4:3505179-3505198 | None:intergenic | 35.0% | |
| GATTTCAAAGTCGTTTATGG+AGG | - | chr7.4:3506249-3506268 | MS.gene78586:CDS | 35.0% | |
| GCCTATATGATCACATTTAG+TGG | - | chr7.4:3505582-3505601 | MS.gene78586:CDS | 35.0% | |
| GTCAATTTCCTCCGTTTAAT+AGG | + | chr7.4:3507423-3507442 | None:intergenic | 35.0% | |
| TCAAGGAGAAAACTTGTGAA+AGG | - | chr7.4:3506637-3506656 | MS.gene78586:CDS | 35.0% | |
| TCCAATGCTCTAACTGTTAA+TGG | + | chr7.4:3507906-3507925 | None:intergenic | 35.0% | |
| TCTTTGAGCACGAGAATATT+CGG | + | chr7.4:3506715-3506734 | None:intergenic | 35.0% | |
| TGTTAATTCAGTGCCTAAAG+TGG | - | chr7.4:3506942-3506961 | MS.gene78586:intron | 35.0% | |
| TGTTACCTCCAATGATTATC+TGG | - | chr7.4:3506585-3506604 | MS.gene78586:CDS | 35.0% | |
| TTACTGTAAGTAGAAGATCG+GGG | + | chr7.4:3506838-3506857 | None:intergenic | 35.0% | |
| TTCAATCAGAGAGTTAGATC+AGG | - | chr7.4:3507375-3507394 | MS.gene78586:intron | 35.0% | |
| TTCGAGAAGGAAGTTAAAGA+AGG | + | chr7.4:3505714-3505733 | None:intergenic | 35.0% | |
| TTGAAGTCTACTGTTGAACT+TGG | - | chr7.4:3506304-3506323 | MS.gene78586:CDS | 35.0% | |
| ! | ATAGGACATAACCTTTTTGC+CGG | - | chr7.4:3505400-3505419 | MS.gene78586:CDS | 35.0% |
| ! | ATGCTTAGATTGTTTCTCCT+AGG | - | chr7.4:3505923-3505942 | MS.gene78586:CDS | 35.0% |
| ! | CCAGAAGAGATCATTACTTT+TGG | + | chr7.4:3506500-3506519 | None:intergenic | 35.0% |
| ! | CTGAAAGCTTCACTAGTTTA+TGG | - | chr7.4:3505963-3505982 | MS.gene78586:CDS | 35.0% |
| ! | GAAGCATCTTCTAATTCAAC+TGG | + | chr7.4:3507144-3507163 | None:intergenic | 35.0% |
| ! | TAGTTGGACCACAAACATTT+TGG | + | chr7.4:3507536-3507555 | None:intergenic | 35.0% |
| !! | AAAGAAAAAGGGTACTGGTA+TGG | + | chr7.4:3506112-3506131 | None:intergenic | 35.0% |
| !! | ACTTTAGGCACTGAATTAAC+AGG | + | chr7.4:3506943-3506962 | None:intergenic | 35.0% |
| !! | GCATTTTATTTATGAGCTCC+GGG | - | chr7.4:3505898-3505917 | MS.gene78586:CDS | 35.0% |
| !!! | TTGCTATTTTCAGACTTCGA+TGG | + | chr7.4:3507714-3507733 | None:intergenic | 35.0% |
| AAGCCAATCTGTCAGACAAA+TGG | + | chr7.4:3505561-3505580 | None:intergenic | 40.0% | |
| AATGAGGAAGAGCCAGAAAA+TGG | - | chr7.4:3506763-3506782 | MS.gene78586:intron | 40.0% | |
| ACATCACAAGGGATTCTCAA+AGG | + | chr7.4:3507825-3507844 | None:intergenic | 40.0% | |
| AGGGCTTAAATATACGAGGA+AGG | - | chr7.4:3506993-3507012 | MS.gene78586:intron | 40.0% | |
| ATGTCTAACATCTGCTTCTC+GGG | - | chr7.4:3507785-3507804 | MS.gene78586:CDS | 40.0% | |
| ATTTACCCATCTCAGACACA+TGG | - | chr7.4:3505188-3505207 | MS.gene78586:CDS | 40.0% | |
| CATGTCTAACATCTGCTTCT+CGG | - | chr7.4:3507784-3507803 | MS.gene78586:CDS | 40.0% | |
| CCAAAGAACCAACATCACAA+GGG | + | chr7.4:3507836-3507855 | None:intergenic | 40.0% | |
| CGAAGTGCAGGAAGAAAAAA+GGG | - | chr7.4:3505365-3505384 | MS.gene78586:CDS | 40.0% | |
| CGCATTGTTGAGAATTCTTC+AGG | - | chr7.4:3507468-3507487 | MS.gene78586:intron | 40.0% | |
| CGGAAAGTCATCTGCTTTAA+GGG | - | chr7.4:3506903-3506922 | MS.gene78586:intron | 40.0% | |
| CTTGAAAACTTCTCAACACC+AGG | + | chr7.4:3506622-3506641 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGCCAAAGT+TGG | - | chr7.4:3506733-3506752 | MS.gene78586:CDS | 40.0% | |
| GACAATAGTTCATGTTGCCT+CGG | + | chr7.4:3505427-3505446 | None:intergenic | 40.0% | |
| GTAACATAGCCTCGATACTT+TGG | + | chr7.4:3506571-3506590 | None:intergenic | 40.0% | |
| TAATTCAGTGCCTAAAGTGG+AGG | - | chr7.4:3506945-3506964 | MS.gene78586:intron | 40.0% | |
| TCATTCTGCTGATGACTAGT+TGG | + | chr7.4:3507552-3507571 | None:intergenic | 40.0% | |
| TCCAAAGAACCAACATCACA+AGG | + | chr7.4:3507837-3507856 | None:intergenic | 40.0% | |
| TCGAAGTGCAGGAAGAAAAA+AGG | - | chr7.4:3505364-3505383 | MS.gene78586:CDS | 40.0% | |
| TGAACATCTTCTGAATCAGC+AGG | + | chr7.4:3505142-3505161 | None:intergenic | 40.0% | |
| TTGAGAATCCCTTGTGATGT+TGG | - | chr7.4:3507825-3507844 | MS.gene78586:CDS | 40.0% | |
| TTTCACCTTCAACATACCTC+AGG | - | chr7.4:3507686-3507705 | MS.gene78586:CDS | 40.0% | |
| ! | AATTGATGATTCACCGAGGA+AGG | - | chr7.4:3507209-3507228 | MS.gene78586:intron | 40.0% |
| ! | CTTCAATTGATGATTCACCG+AGG | - | chr7.4:3507205-3507224 | MS.gene78586:intron | 40.0% |
| ! | GACATGGATCTTTTGCCTTT+AGG | + | chr7.4:3507770-3507789 | None:intergenic | 40.0% |
| ! | GGTCTTCTGAGAGATAGTAA+GGG | - | chr7.4:3507177-3507196 | MS.gene78586:intron | 40.0% |
| ! | TGCAAAGCTTTGTCTTCTCT+TGG | - | chr7.4:3506427-3506446 | MS.gene78586:CDS | 40.0% |
| ! | TGGTCTTCTGAGAGATAGTA+AGG | - | chr7.4:3507176-3507195 | MS.gene78586:intron | 40.0% |
| !! | ATTGATACCAGTTTGGTGCA+TGG | - | chr7.4:3506880-3506899 | MS.gene78586:intron | 40.0% |
| !! | CTGGTGTTGAGAAGTTTTCA+AGG | - | chr7.4:3506620-3506639 | MS.gene78586:CDS | 40.0% |
| !! | CTTTGCCGACTTCTGTTTAA+TGG | + | chr7.4:3507046-3507065 | None:intergenic | 40.0% |
| !! | GTAGGTATTGGTAAGGAGAA+GGG | - | chr7.4:3506343-3506362 | MS.gene78586:CDS | 40.0% |
| !! | TAGGTATTGGTAAGGAGAAG+GGG | - | chr7.4:3506344-3506363 | MS.gene78586:CDS | 40.0% |
| !! | TGTAGGTATTGGTAAGGAGA+AGG | - | chr7.4:3506342-3506361 | MS.gene78586:CDS | 40.0% |
| AACAGCCTGATATGAATCCG+AGG | - | chr7.4:3507859-3507878 | MS.gene78586:CDS | 45.0% | |
| AATAGGTCATGCATACCAGG+CGG | - | chr7.4:3505066-3505085 | MS.gene78586:CDS | 45.0% | |
| ATCACTCCATGTGTCTGAGA+TGG | + | chr7.4:3505197-3505216 | None:intergenic | 45.0% | |
| ATCTCAAGATGCTCTGTCAC+AGG | - | chr7.4:3505474-3505493 | MS.gene78586:CDS | 45.0% | |
| ATCTTAGATGGTCGAAGTGC+AGG | - | chr7.4:3505353-3505372 | MS.gene78586:CDS | 45.0% | |
| ATTCACCGAGAACAAAGGGA+TGG | - | chr7.4:3505282-3505301 | MS.gene78586:CDS | 45.0% | |
| CAGCTGTTCCTATTAAACGG+AGG | - | chr7.4:3507412-3507431 | MS.gene78586:intron | 45.0% | |
| CAGGATGTTTAGGCTTCTCT+CGG | - | chr7.4:3507487-3507506 | MS.gene78586:intron | 45.0% | |
| CCAACATCTACCTCCACTTT+AGG | + | chr7.4:3506958-3506977 | None:intergenic | 45.0% | |
| CCTAAAGTGGAGGTAGATGT+TGG | - | chr7.4:3506955-3506974 | MS.gene78586:intron | 45.0% | |
| CCTATTCGAGGACTGAATTC+AGG | + | chr7.4:3505052-3505071 | None:intergenic | 45.0% | |
| CCTGAATTCAGTCCTCGAAT+AGG | - | chr7.4:3505049-3505068 | MS.gene78586:CDS | 45.0% | |
| CGAGAAGCAGATGTTAGACA+TGG | + | chr7.4:3507786-3507805 | None:intergenic | 45.0% | |
| CTCATTGCAGCTACCAACTT+TGG | + | chr7.4:3506749-3506768 | None:intergenic | 45.0% | |
| CTTGTGGAAGCTGTAGGTAT+TGG | - | chr7.4:3506331-3506350 | MS.gene78586:CDS | 45.0% | |
| CTTTAGGCCTTGCTCATCTT+CGG | + | chr7.4:3507754-3507773 | None:intergenic | 45.0% | |
| GAAGACAAAGCTTTGCAAGC+TGG | + | chr7.4:3506424-3506443 | None:intergenic | 45.0% | |
| GAGGAAGGTAAACCATAGCA+AGG | - | chr7.4:3507008-3507027 | MS.gene78586:intron | 45.0% | |
| GATGCTTCTACGATGACTAC+TGG | - | chr7.4:3507156-3507175 | MS.gene78586:intron | 45.0% | |
| GCGGAAAGTCATCTGCTTTA+AGG | - | chr7.4:3506902-3506921 | MS.gene78586:intron | 45.0% | |
| TCAAAGTCGTTTATGGAGGG+CGG | - | chr7.4:3506253-3506272 | MS.gene78586:CDS | 45.0% | |
| TCATAGAAGGAATTTCCGCC+TGG | + | chr7.4:3505084-3505103 | None:intergenic | 45.0% | |
| TCGAATAGGTCATGCATACC+AGG | - | chr7.4:3505063-3505082 | MS.gene78586:CDS | 45.0% | |
| TGAGATTCTTCAGAGACGTG+AGG | + | chr7.4:3505460-3505479 | None:intergenic | 45.0% | |
| TGGTATGCATGACCTATTCG+AGG | + | chr7.4:3505064-3505083 | None:intergenic | 45.0% | |
| TGTCTCCTCGGATTCATATC+AGG | + | chr7.4:3507867-3507886 | None:intergenic | 45.0% | |
| TGTTGAACTTGGCGTACTTG+TGG | - | chr7.4:3506315-3506334 | MS.gene78586:CDS | 45.0% | |
| TTCACCGAGAACAAAGGGAT+GGG | - | chr7.4:3505283-3505302 | MS.gene78586:CDS | 45.0% | |
| TTCATGGACCATACGTCTGA+TGG | - | chr7.4:3505022-3505041 | MS.gene78586:CDS | 45.0% | |
| TTCTTCAGCAGACAGAAGTG+TGG | - | chr7.4:3507581-3507600 | MS.gene78586:CDS | 45.0% | |
| ! | AATGCGGCTTTTCTCTGACT+TGG | + | chr7.4:3507454-3507473 | None:intergenic | 45.0% |
| ! | ATCTCTTCTGGGAAGCTGTT+TGG | - | chr7.4:3506509-3506528 | MS.gene78586:CDS | 45.0% |
| ! | CTTCTGAGAGATAGTAAGGG+TGG | - | chr7.4:3507180-3507199 | MS.gene78586:intron | 45.0% |
| ! | GAAACAATCTAAGCATCGCC+CGG | + | chr7.4:3505919-3505938 | None:intergenic | 45.0% |
| ! | TCACTCCATGTGTCTGAGAT+GGG | + | chr7.4:3505196-3505215 | None:intergenic | 45.0% |
| ! | TGAAAGGATCTTGGTGTGTC+TGG | + | chr7.4:3507983-3508002 | None:intergenic | 45.0% |
| ! | TGCAGAGGTGTATCTAACAG+TGG | - | chr7.4:3507285-3507304 | MS.gene78586:intron | 45.0% |
| ! | TTTGCAGCATCGAATTGCCT+AGG | + | chr7.4:3505943-3505962 | None:intergenic | 45.0% |
| ! | TTTTAGGCGCATCCTTGCTA+TGG | + | chr7.4:3507023-3507042 | None:intergenic | 45.0% |
| !! | AGGTATTGGTAAGGAGAAGG+GGG | - | chr7.4:3506345-3506364 | MS.gene78586:CDS | 45.0% |
| !! | CAAAGTTGGTAGCTGCAATG+AGG | - | chr7.4:3506747-3506766 | MS.gene78586:CDS | 45.0% |
| !! | CCCTTGTGATGTTGGTTCTT+TGG | - | chr7.4:3507833-3507852 | MS.gene78586:CDS | 45.0% |
| !! | GGAAGCTGTAGGTATTGGTA+AGG | - | chr7.4:3506336-3506355 | MS.gene78586:CDS | 45.0% |
| !! | TCTGAGCAACCAAAGTATCG+AGG | - | chr7.4:3506559-3506578 | MS.gene78586:CDS | 45.0% |
| !! | TTTCTAGAGCTCTGTCTCCT+CGG | + | chr7.4:3507879-3507898 | None:intergenic | 45.0% |
| AAAGCTTTGCAAGCTGGTGC+AGG | + | chr7.4:3506418-3506437 | None:intergenic | 50.0% | |
| AACATCTGCTTCTCGGGAAG+TGG | - | chr7.4:3507791-3507810 | MS.gene78586:CDS | 50.0% | |
| AAGTAGAAGATCGGGGCTTG+AGG | + | chr7.4:3506831-3506850 | None:intergenic | 50.0% | |
| CAGGATCTCCATCAGACGTA+TGG | + | chr7.4:3505033-3505052 | None:intergenic | 50.0% | |
| CGAAGATGAGCAAGGCCTAA+AGG | - | chr7.4:3507752-3507771 | MS.gene78586:CDS | 50.0% | |
| CTCTTAGCTTCCACCTTCCT+CGG | + | chr7.4:3507225-3507244 | None:intergenic | 50.0% | |
| GACTCATTCGAAGCGAAAGC+TGG | + | chr7.4:3505120-3505139 | None:intergenic | 50.0% | |
| GGCAAGGACTGAAAGGATCT+TGG | + | chr7.4:3507992-3508011 | None:intergenic | 50.0% | |
| GTTCCATGCCAAGCCTAGTA+AGG | + | chr7.4:3506372-3506391 | None:intergenic | 50.0% | |
| TAGTTCATGTTGCCTCGGTC+CGG | + | chr7.4:3505422-3505441 | None:intergenic | 50.0% | |
| TCACCGAGAACAAAGGGATG+GGG | - | chr7.4:3505284-3505303 | MS.gene78586:CDS | 50.0% | |
| TGATGATTCACCGAGGAAGG+TGG | - | chr7.4:3507212-3507231 | MS.gene78586:intron | 50.0% | |
| TGCTTCTCGGGAAGTGGTTA+AGG | - | chr7.4:3507797-3507816 | MS.gene78586:CDS | 50.0% | |
| TGGTGCCTGAGGTATGTTGA+AGG | + | chr7.4:3507694-3507713 | None:intergenic | 50.0% | |
| TTCCCCCATCCCTTTGTTCT+CGG | + | chr7.4:3505290-3505309 | None:intergenic | 50.0% | |
| ! | AACCAAACTGATGGGTGCAG+AGG | - | chr7.4:3507270-3507289 | MS.gene78586:intron | 50.0% |
| ! | AGCAGACAGAAGTGTGGAAG+AGG | - | chr7.4:3507587-3507606 | MS.gene78586:CDS | 50.0% |
| ! | ATAACCTTTTTGCCGGACCG+AGG | - | chr7.4:3505407-3505426 | MS.gene78586:CDS | 50.0% |
| !! | GATACCAGTTTGGTGCATGG+CGG | - | chr7.4:3506883-3506902 | MS.gene78586:intron | 50.0% |
| AACGCTTGAACGTCCTTCCC+AGG | + | chr7.4:3506394-3506413 | None:intergenic | 55.0% | |
| AAGGGGGACCTTACTAGGCT+TGG | - | chr7.4:3506361-3506380 | MS.gene78586:CDS | 55.0% | |
| ACTAGGCTTGGCATGGAACC+TGG | - | chr7.4:3506373-3506392 | MS.gene78586:CDS | 55.0% | |
| AGGAGAAGGGGGACCTTACT+AGG | - | chr7.4:3506356-3506375 | MS.gene78586:CDS | 55.0% | |
| ATGGCAGCCGAAGATGAGCA+AGG | - | chr7.4:3507744-3507763 | MS.gene78586:CDS | 55.0% | |
| CACCGAGAACAAAGGGATGG+GGG | - | chr7.4:3505285-3505304 | MS.gene78586:CDS | 55.0% | |
| CACCTCTGCACCCATCAGTT+TGG | + | chr7.4:3507275-3507294 | None:intergenic | 55.0% | |
| CGAGGAAGGTGGAAGCTAAG+AGG | - | chr7.4:3507223-3507242 | MS.gene78586:intron | 55.0% | |
| CTAGGCTTGGCATGGAACCT+GGG | - | chr7.4:3506374-3506393 | MS.gene78586:CDS | 55.0% | |
| CTTTCCGCCATGCACCAAAC+TGG | + | chr7.4:3506890-3506909 | None:intergenic | 55.0% | |
| GGACCTTACTAGGCTTGGCA+TGG | - | chr7.4:3506366-3506385 | MS.gene78586:CDS | 55.0% | |
| GGCGTACTTGTGGAAGCTGT+AGG | - | chr7.4:3506325-3506344 | MS.gene78586:CDS | 55.0% | |
| TCAGACTTCGATGGTGCCTG+AGG | + | chr7.4:3507705-3507724 | None:intergenic | 55.0% | |
| TCCTTTCAGTCCTTGCCGCA+AGG | - | chr7.4:3507995-3508014 | MS.gene78586:CDS | 55.0% | |
| AGCTGTTTGGCCTCGCTTGC+TGG | - | chr7.4:3506522-3506541 | MS.gene78586:CDS | 60.0% | |
| CAACCTCTTGCCAGCAAGCG+AGG | + | chr7.4:3506535-3506554 | None:intergenic | 60.0% | |
| CATGTACGAGCCTTGCGGCA+AGG | + | chr7.4:3508008-3508027 | None:intergenic | 60.0% | |
| GCCTTGCGGCAAGGACTGAA+AGG | + | chr7.4:3507999-3508018 | None:intergenic | 60.0% | |
| GCTTGGCATGGAACCTGGGA+AGG | - | chr7.4:3506378-3506397 | MS.gene78586:CDS | 60.0% | |
| GTTGCCTCGGTCCGGCAAAA+AGG | + | chr7.4:3505414-3505433 | None:intergenic | 60.0% | |
| ! | CTCGCTTGCTGGCAAGAGGT+TGG | - | chr7.4:3506533-3506552 | MS.gene78586:CDS | 60.0% |
| ! | TGGCCTCGCTTGCTGGCAAG+AGG | - | chr7.4:3506529-3506548 | MS.gene78586:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 3504989 | 3508028 | 3504989 | ID=MS.gene78586 |
| chr7.4 | mRNA | 3504989 | 3508028 | 3504989 | ID=MS.gene78586.t1;Parent=MS.gene78586 |
| chr7.4 | exon | 3507555 | 3508028 | 3507555 | ID=MS.gene78586.t1.exon1;Parent=MS.gene78586.t1 |
| chr7.4 | CDS | 3507555 | 3508028 | 3507555 | ID=cds.MS.gene78586.t1;Parent=MS.gene78586.t1 |
| chr7.4 | exon | 3504989 | 3506767 | 3504989 | ID=MS.gene78586.t1.exon2;Parent=MS.gene78586.t1 |
| chr7.4 | CDS | 3504989 | 3506767 | 3504989 | ID=cds.MS.gene78586.t1;Parent=MS.gene78586.t1 |
| Gene Sequence |
| Protein sequence |
