Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45281.t1 | XP_013467585.1 | 99.1 | 111 | 1 | 0 | 1 | 111 | 1 | 111 | 1.50E-55 | 225.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45281.t1 | Q9LSQ6 | 67.6 | 105 | 33 | 1 | 6 | 109 | 19 | 123 | 2.3e-33 | 142.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45281.t1 | I3SZY1 | 99.1 | 111 | 1 | 0 | 1 | 111 | 1 | 111 | 1.1e-55 | 225.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene45281 | 0.835141 | 1.99E-56 | -1.69E-46 |
| MS.gene04918 | MS.gene45281 | 0.8147 | 1.35E-51 | -1.69E-46 |
| MS.gene049254 | MS.gene45281 | 0.81605 | 6.75E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene45281 | 0.833234 | 6.00E-56 | -1.69E-46 |
| MS.gene049350 | MS.gene45281 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene45281 | 0.826821 | 2.20E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene45281 | 0.819801 | 9.60E-53 | -1.69E-46 |
| MS.gene049585 | MS.gene45281 | 0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene45281 | 0.83591 | 1.27E-56 | -1.69E-46 |
| MS.gene049807 | MS.gene45281 | 0.857877 | 1.21E-62 | -1.69E-46 |
| MS.gene049983 | MS.gene45281 | 0.851653 | 7.71E-61 | -1.69E-46 |
| MS.gene04998 | MS.gene45281 | 0.840321 | 9.33E-58 | -1.69E-46 |
| MS.gene050224 | MS.gene45281 | 0.823998 | 1.02E-53 | -1.69E-46 |
| MS.gene050253 | MS.gene45281 | 0.817731 | 2.83E-52 | -1.69E-46 |
| MS.gene050273 | MS.gene45281 | 0.821677 | 3.56E-53 | -1.69E-46 |
| MS.gene050359 | MS.gene45281 | 0.852948 | 3.30E-61 | -1.69E-46 |
| MS.gene050414 | MS.gene45281 | 0.882659 | 8.65E-71 | -1.69E-46 |
| MS.gene050551 | MS.gene45281 | 0.81136 | 7.28E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene45281 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene05059 | MS.gene45281 | 0.804395 | 2.20E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene45281 | 0.840811 | 6.94E-58 | -1.69E-46 |
| MS.gene050654 | MS.gene45281 | 0.849626 | 2.87E-60 | -1.69E-46 |
| MS.gene050657 | MS.gene45281 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene45281 | 0.812957 | 3.26E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene45281 | 0.805247 | 1.46E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene45281 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene45281 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene45281 | 0.803586 | 3.25E-49 | -1.69E-46 |
| MS.gene051029 | MS.gene45281 | 0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene051043 | MS.gene45281 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene45281 | 0.809228 | 2.10E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene45281 | 0.802029 | 6.81E-49 | -1.69E-46 |
| MS.gene051201 | MS.gene45281 | 0.823927 | 1.06E-53 | -1.69E-46 |
| MS.gene051226 | MS.gene45281 | 0.807636 | 4.59E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene45281 | 0.828446 | 8.95E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene45281 | 0.841356 | 4.99E-58 | -1.69E-46 |
| MS.gene051343 | MS.gene45281 | 0.819405 | 1.18E-52 | -1.69E-46 |
| MS.gene051490 | MS.gene45281 | 0.822601 | 2.17E-53 | -1.69E-46 |
| MS.gene051676 | MS.gene45281 | 0.813441 | 2.56E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene45281 | 0.802824 | 4.67E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene45281 | 0.812347 | 4.44E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene45281 | 0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene051819 | MS.gene45281 | 0.816444 | 5.51E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene45281 | 0.871889 | 4.84E-67 | -1.69E-46 |
| MS.gene052016 | MS.gene45281 | 0.879008 | 1.77E-69 | -1.69E-46 |
| MS.gene052037 | MS.gene45281 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene052052 | MS.gene45281 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene45281 | 0.81253 | 4.05E-51 | -1.69E-46 |
| MS.gene052239 | MS.gene45281 | -0.805446 | 1.33E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene45281 | -0.816553 | 5.21E-52 | -1.69E-46 |
| MS.gene05224 | MS.gene45281 | 0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene45281 | 0.874382 | 7.05E-68 | -1.69E-46 |
| MS.gene052335 | MS.gene45281 | 0.844201 | 8.76E-59 | -1.69E-46 |
| MS.gene052342 | MS.gene45281 | 0.81317 | 2.93E-51 | -1.69E-46 |
| MS.gene052459 | MS.gene45281 | 0.823571 | 1.29E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene45281 | 0.881871 | 1.67E-70 | -1.69E-46 |
| MS.gene052493 | MS.gene45281 | 0.828437 | 8.99E-55 | -1.69E-46 |
| MS.gene052514 | MS.gene45281 | 0.815572 | 8.63E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene45281 | 0.840223 | 9.90E-58 | -1.69E-46 |
| MS.gene052533 | MS.gene45281 | 0.852513 | 4.40E-61 | -1.69E-46 |
| MS.gene052609 | MS.gene45281 | 0.864149 | 1.50E-64 | -1.69E-46 |
| MS.gene052932 | MS.gene45281 | 0.825743 | 3.97E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene45281 | 0.855847 | 4.79E-62 | -1.69E-46 |
| MS.gene053143 | MS.gene45281 | 0.858806 | 6.40E-63 | -1.69E-46 |
| MS.gene053144 | MS.gene45281 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene45281 | 0.826631 | 2.44E-54 | -1.69E-46 |
| MS.gene053456 | MS.gene45281 | 0.817547 | 3.12E-52 | -1.69E-46 |
| MS.gene05350 | MS.gene45281 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene45281 | 0.822106 | 2.83E-53 | -1.69E-46 |
| MS.gene053620 | MS.gene45281 | 0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene053678 | MS.gene45281 | 0.804327 | 2.28E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene45281 | 0.802757 | 4.82E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene45281 | 0.864701 | 1.01E-64 | -1.69E-46 |
| MS.gene05423 | MS.gene45281 | 0.825153 | 5.47E-54 | -1.69E-46 |
| MS.gene054554 | MS.gene45281 | 0.820519 | 6.57E-53 | -1.69E-46 |
| MS.gene054576 | MS.gene45281 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene45281 | 0.827209 | 1.78E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene45281 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene054617 | MS.gene45281 | 0.845053 | 5.16E-59 | -1.69E-46 |
| MS.gene054641 | MS.gene45281 | 0.807293 | 5.43E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene45281 | 0.818186 | 2.24E-52 | -1.69E-46 |
| MS.gene054772 | MS.gene45281 | 0.827631 | 1.41E-54 | -1.69E-46 |
| MS.gene054824 | MS.gene45281 | 0.829464 | 5.07E-55 | -1.69E-46 |
| MS.gene054892 | MS.gene45281 | 0.857159 | 1.97E-62 | -1.69E-46 |
| MS.gene054893 | MS.gene45281 | 0.85725 | 1.85E-62 | -1.69E-46 |
| MS.gene054991 | MS.gene45281 | 0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene055141 | MS.gene45281 | 0.813899 | 2.03E-51 | -1.69E-46 |
| MS.gene055229 | MS.gene45281 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene055231 | MS.gene45281 | 0.813839 | 2.09E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene45281 | 0.81524 | 1.02E-51 | -1.69E-46 |
| MS.gene055386 | MS.gene45281 | 0.813259 | 2.80E-51 | -1.69E-46 |
| MS.gene05539 | MS.gene45281 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene45281 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene45281 | 0.811623 | 6.38E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene45281 | 0.841413 | 4.82E-58 | -1.69E-46 |
| MS.gene055513 | MS.gene45281 | 0.878694 | 2.28E-69 | -1.69E-46 |
| MS.gene05552 | MS.gene45281 | 0.821524 | 3.86E-53 | -1.69E-46 |
| MS.gene055724 | MS.gene45281 | 0.809714 | 1.65E-50 | -1.69E-46 |
| MS.gene05574 | MS.gene45281 | 0.815987 | 6.98E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene45281 | 0.84609 | 2.70E-59 | -1.69E-46 |
| MS.gene055937 | MS.gene45281 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene45281 | 0.80758 | 4.71E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene45281 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene45281 | 0.822663 | 2.10E-53 | -1.69E-46 |
| MS.gene056285 | MS.gene45281 | 0.802719 | 4.91E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene45281 | 0.839652 | 1.39E-57 | -1.69E-46 |
| MS.gene056390 | MS.gene45281 | 0.841005 | 6.18E-58 | -1.69E-46 |
| MS.gene056507 | MS.gene45281 | 0.841908 | 3.57E-58 | -1.69E-46 |
| MS.gene056677 | MS.gene45281 | 0.846666 | 1.88E-59 | -1.69E-46 |
| MS.gene056699 | MS.gene45281 | 0.848634 | 5.41E-60 | -1.69E-46 |
| MS.gene05686 | MS.gene45281 | 0.8294 | 5.26E-55 | -1.69E-46 |
| MS.gene057034 | MS.gene45281 | 0.84252 | 2.46E-58 | -1.69E-46 |
| MS.gene057102 | MS.gene45281 | 0.849821 | 2.53E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene45281 | 0.802536 | 5.35E-49 | -1.69E-46 |
| MS.gene057294 | MS.gene45281 | 0.808746 | 2.66E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene45281 | 0.825206 | 5.32E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene45281 | 0.835545 | 1.58E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene45281 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene058159 | MS.gene45281 | 0.822009 | 2.98E-53 | -1.69E-46 |
| MS.gene058261 | MS.gene45281 | 0.80624 | 9.06E-50 | -1.69E-46 |
| MS.gene058279 | MS.gene45281 | 0.802176 | 6.35E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene45281 | 0.825809 | 3.83E-54 | -1.69E-46 |
| MS.gene058330 | MS.gene45281 | 0.836123 | 1.13E-56 | -1.69E-46 |
| MS.gene058429 | MS.gene45281 | 0.821331 | 4.27E-53 | -1.69E-46 |
| MS.gene058492 | MS.gene45281 | 0.826426 | 2.73E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene45281 | 0.804145 | 2.49E-49 | -1.69E-46 |
| MS.gene058649 | MS.gene45281 | 0.831485 | 1.63E-55 | -1.69E-46 |
| MS.gene058668 | MS.gene45281 | 0.814107 | 1.82E-51 | -1.69E-46 |
| MS.gene058720 | MS.gene45281 | 0.828907 | 6.92E-55 | -1.69E-46 |
| MS.gene058758 | MS.gene45281 | 0.819135 | 1.36E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene45281 | 0.866436 | 2.85E-65 | -1.69E-46 |
| MS.gene059439 | MS.gene45281 | 0.801876 | 7.32E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene45281 | 0.822084 | 2.86E-53 | -1.69E-46 |
| MS.gene059634 | MS.gene45281 | 0.82023 | 7.66E-53 | -1.69E-46 |
| MS.gene059774 | MS.gene45281 | 0.825784 | 3.88E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene45281 | -0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene45281 | 0.874703 | 5.49E-68 | -1.69E-46 |
| MS.gene060122 | MS.gene45281 | -0.8136 | 2.36E-51 | -1.69E-46 |
| MS.gene060259 | MS.gene45281 | 0.846798 | 1.73E-59 | -1.69E-46 |
| MS.gene060343 | MS.gene45281 | -0.801233 | 9.92E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene45281 | 0.810987 | 8.77E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene45281 | 0.82044 | 6.85E-53 | -1.69E-46 |
| MS.gene060697 | MS.gene45281 | 0.825313 | 5.02E-54 | -1.69E-46 |
| MS.gene060777 | MS.gene45281 | 0.822757 | 2.00E-53 | -1.69E-46 |
| MS.gene060840 | MS.gene45281 | 0.805689 | 1.18E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene45281 | 0.877184 | 7.70E-69 | -1.69E-46 |
| MS.gene060933 | MS.gene45281 | 0.820381 | 7.07E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene45281 | 0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene061006 | MS.gene45281 | 0.8217 | 3.51E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene45281 | 0.877972 | 4.09E-69 | -1.69E-46 |
| MS.gene061160 | MS.gene45281 | 0.809638 | 1.71E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene45281 | 0.818817 | 1.61E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067296 | MS.gene45281 | PPI |
| MS.gene84736 | MS.gene45281 | PPI |
| MS.gene068384 | MS.gene45281 | PPI |
| MS.gene060524 | MS.gene45281 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45281.t1 | MTR_1g052885 | 99.099 | 111 | 1 | 0 | 1 | 111 | 1 | 111 | 2.77e-75 | 218 |
| MS.gene45281.t1 | MTR_2g089210 | 86.667 | 105 | 14 | 0 | 6 | 110 | 10 | 114 | 1.24e-60 | 181 |
| MS.gene45281.t1 | MTR_2g081580 | 69.444 | 108 | 33 | 0 | 6 | 113 | 10 | 117 | 5.64e-48 | 150 |
| MS.gene45281.t1 | MTR_8g466250 | 66.667 | 105 | 35 | 0 | 6 | 110 | 11 | 115 | 1.41e-44 | 141 |
| MS.gene45281.t1 | MTR_2g011400 | 60.396 | 101 | 40 | 0 | 6 | 106 | 14 | 114 | 2.61e-38 | 125 |
| MS.gene45281.t1 | MTR_8g027180 | 52.381 | 105 | 50 | 0 | 6 | 110 | 19 | 123 | 6.61e-35 | 117 |
| MS.gene45281.t1 | MTR_2g081300 | 62.637 | 91 | 33 | 1 | 6 | 96 | 5 | 94 | 7.02e-33 | 111 |
| MS.gene45281.t1 | MTR_2g081350 | 61.538 | 91 | 34 | 1 | 6 | 96 | 9 | 98 | 1.73e-31 | 108 |
| MS.gene45281.t1 | MTR_2g081440 | 61.538 | 91 | 34 | 1 | 6 | 96 | 9 | 98 | 2.38e-31 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45281.t1 | AT5G54490 | 66.981 | 106 | 34 | 1 | 6 | 110 | 19 | 124 | 1.80e-45 | 144 |
| MS.gene45281.t1 | AT4G27280 | 66.355 | 107 | 35 | 1 | 6 | 111 | 19 | 125 | 2.02e-43 | 139 |
| MS.gene45281.t1 | AT2G46600 | 54.128 | 109 | 50 | 0 | 6 | 114 | 22 | 130 | 2.87e-38 | 125 |
Find 22 sgRNAs with CRISPR-Local
Find 25 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACTCTTCCATCAATTC+AGG | 0.351816 | 4.3:+52602415 | None:intergenic |
| TGATGGAAGAGTCTTGGTTT+TGG | 0.354264 | 4.3:-52602408 | MS.gene45281:CDS |
| AGGTGGTGAAGGTTTAATAA+AGG | 0.428490 | 4.3:-52602638 | MS.gene45281:CDS |
| CTGAATTGATGGAAGAGTCT+TGG | 0.441368 | 4.3:-52602414 | MS.gene45281:CDS |
| TTGAAGGAAGATGAACTTGT+TGG | 0.457469 | 4.3:-52602517 | MS.gene45281:CDS |
| TTGTTGATGGACAAAGAAAA+AGG | 0.459319 | 4.3:-52602595 | MS.gene45281:CDS |
| CCTAGCTTGTTTGCCATCAC+TGG | 0.464938 | 4.3:+52602658 | None:intergenic |
| TGAAGACTTGTTACCAGTGA+TGG | 0.470070 | 4.3:-52602671 | MS.gene45281:CDS |
| TTTGGGTTTACAAGATTTGA+AGG | 0.473694 | 4.3:-52602533 | MS.gene45281:CDS |
| TGATAACATTGGATAGTTTG+AGG | 0.497485 | 4.3:-52602570 | MS.gene45281:CDS |
| GAAGGTGATTTAGATAGAGA+TGG | 0.504919 | 4.3:-52602484 | MS.gene45281:CDS |
| TAGGTTGAGTCCTGAATTGA+TGG | 0.511296 | 4.3:-52602425 | MS.gene45281:CDS |
| TAACAAGTCTTCAAAACCAT+TGG | 0.541959 | 4.3:+52602681 | None:intergenic |
| GAAGCTCTTCAACATGAACT+TGG | 0.544590 | 4.3:-52602379 | MS.gene45281:CDS |
| TTAATAAAGGAGCTATGCAA+TGG | 0.554583 | 4.3:-52602625 | MS.gene45281:CDS |
| GCAAACAAGCTAGGTGGTGA+AGG | 0.561539 | 4.3:-52602649 | MS.gene45281:CDS |
| CCAGTGATGGCAAACAAGCT+AGG | 0.566082 | 4.3:-52602658 | MS.gene45281:CDS |
| AGATGGAGCACTTACTCAGA+TGG | 0.568398 | 4.3:-52602467 | MS.gene45281:CDS |
| TTATCAACAATGGCTACCAA+TGG | 0.580721 | 4.3:-52602697 | None:intergenic |
| CTTGTTGGTATGATGAATGA+AGG | 0.583851 | 4.3:-52602502 | MS.gene45281:CDS |
| ATTGTTCCTAGGAAACTACA+AGG | 0.600196 | 4.3:+52602333 | None:intergenic |
| GTGATGGCAAACAAGCTAGG+TGG | 0.738373 | 4.3:-52602655 | MS.gene45281:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTGTGTTTTGATGTTT+AGG | - | chr4.3:52602592-52602611 | MS.gene45281:CDS | 25.0% |
| TAACAAGTCTTCAAAACCAT+TGG | + | chr4.3:52602358-52602377 | None:intergenic | 30.0% | |
| TGATAACATTGGATAGTTTG+AGG | - | chr4.3:52602466-52602485 | MS.gene45281:CDS | 30.0% | |
| TTAATAAAGGAGCTATGCAA+TGG | - | chr4.3:52602411-52602430 | MS.gene45281:CDS | 30.0% | |
| ! | AGAAAAAGGTGTGATAACAT+TGG | - | chr4.3:52602455-52602474 | MS.gene45281:CDS | 30.0% |
| ! | TTGTTGATGGACAAAGAAAA+AGG | - | chr4.3:52602441-52602460 | MS.gene45281:CDS | 30.0% |
| ! | TTTGGGTTTACAAGATTTGA+AGG | - | chr4.3:52602503-52602522 | MS.gene45281:CDS | 30.0% |
| !!! | CAATGGTTTTGAATTGTTGA+TGG | - | chr4.3:52602428-52602447 | MS.gene45281:CDS | 30.0% |
| AGGTGGTGAAGGTTTAATAA+AGG | - | chr4.3:52602398-52602417 | MS.gene45281:CDS | 35.0% | |
| CTTGTTGGTATGATGAATGA+AGG | - | chr4.3:52602534-52602553 | MS.gene45281:CDS | 35.0% | |
| GAAGGTGATTTAGATAGAGA+TGG | - | chr4.3:52602552-52602571 | MS.gene45281:CDS | 35.0% | |
| TTGAAGGAAGATGAACTTGT+TGG | - | chr4.3:52602519-52602538 | MS.gene45281:CDS | 35.0% | |
| CAAGACTCTTCCATCAATTC+AGG | + | chr4.3:52602624-52602643 | None:intergenic | 40.0% | |
| CTGAATTGATGGAAGAGTCT+TGG | - | chr4.3:52602622-52602641 | MS.gene45281:CDS | 40.0% | |
| GAAGCTCTTCAACATGAACT+TGG | - | chr4.3:52602657-52602676 | MS.gene45281:CDS | 40.0% | |
| ! | TAGGTTGAGTCCTGAATTGA+TGG | - | chr4.3:52602611-52602630 | MS.gene45281:CDS | 40.0% |
| ! | TGATGGAAGAGTCTTGGTTT+TGG | - | chr4.3:52602628-52602647 | MS.gene45281:CDS | 40.0% |
| !! | TGAAGACTTGTTACCAGTGA+TGG | - | chr4.3:52602365-52602384 | MS.gene45281:CDS | 40.0% |
| !!! | AGGAAAAACGCTGCTGTTTT+GGG | - | chr4.3:52602486-52602505 | MS.gene45281:CDS | 40.0% |
| ! | AGATGGAGCACTTACTCAGA+TGG | - | chr4.3:52602569-52602588 | MS.gene45281:CDS | 45.0% |
| !! | GAGGAAAAACGCTGCTGTTT+TGG | - | chr4.3:52602485-52602504 | MS.gene45281:CDS | 45.0% |
| CCAGTGATGGCAAACAAGCT+AGG | - | chr4.3:52602378-52602397 | MS.gene45281:CDS | 50.0% | |
| GCAAACAAGCTAGGTGGTGA+AGG | - | chr4.3:52602387-52602406 | MS.gene45281:CDS | 50.0% | |
| GTGATGGCAAACAAGCTAGG+TGG | - | chr4.3:52602381-52602400 | MS.gene45281:CDS | 50.0% | |
| !! | CCTAGCTTGTTTGCCATCAC+TGG | + | chr4.3:52602381-52602400 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 52602348 | 52602710 | 52602348 | ID=MS.gene45281 |
| chr4.3 | mRNA | 52602348 | 52602710 | 52602348 | ID=MS.gene45281.t1;Parent=MS.gene45281 |
| chr4.3 | exon | 52602348 | 52602710 | 52602348 | ID=MS.gene45281.t1.exon1;Parent=MS.gene45281.t1 |
| chr4.3 | CDS | 52602348 | 52602710 | 52602348 | ID=cds.MS.gene45281.t1;Parent=MS.gene45281.t1 |
| Gene Sequence |
| Protein sequence |
