Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052936.t1 | RHN58668.1 | 97.8 | 276 | 6 | 0 | 1 | 276 | 33 | 308 | 2.50E-151 | 544.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052936.t1 | Q8H151 | 73.2 | 276 | 71 | 1 | 1 | 276 | 304 | 576 | 1.7e-116 | 420.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052936.t1 | A0A072UGJ0 | 97.8 | 276 | 6 | 0 | 1 | 276 | 291 | 566 | 1.8e-151 | 544.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene052936 | -0.813617 | 2.34E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene052937 | 0.84562 | 3.63E-59 | -1.69E-46 |
| MS.gene052936 | MS.gene053286 | -0.800597 | 1.34E-48 | -1.69E-46 |
| MS.gene052936 | MS.gene055362 | -0.805831 | 1.10E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene058544 | -0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene059022 | -0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene059023 | -0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene059718 | -0.808393 | 3.17E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene06077 | -0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene06092 | -0.801263 | 9.78E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene061340 | -0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene052936 | MS.gene061360 | -0.805371 | 1.38E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene06226 | -0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene06288 | -0.823605 | 1.27E-53 | -1.69E-46 |
| MS.gene052936 | MS.gene072573 | -0.802744 | 4.85E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene07606 | -0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene052936 | MS.gene08487 | -0.842656 | 2.26E-58 | -1.69E-46 |
| MS.gene052936 | MS.gene09798 | -0.819741 | 9.90E-53 | -1.69E-46 |
| MS.gene052936 | MS.gene22474 | -0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene24024 | -0.811402 | 7.13E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene24025 | -0.810492 | 1.12E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene24952 | 0.846735 | 1.80E-59 | -1.69E-46 |
| MS.gene052936 | MS.gene27117 | -0.813617 | 2.34E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene28138 | -0.810252 | 1.26E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene29992 | -0.805744 | 1.15E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene32766 | -0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene33047 | -0.80049 | 1.41E-48 | -1.69E-46 |
| MS.gene052936 | MS.gene33407 | 0.828102 | 1.08E-54 | -1.69E-46 |
| MS.gene052936 | MS.gene34412 | 0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene052936 | MS.gene37678 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene41128 | -0.812049 | 5.15E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene41718 | -0.806279 | 8.88E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene42627 | -0.808503 | 3.00E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene42682 | -0.808049 | 3.75E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene46300 | -0.803648 | 3.15E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene46952 | -0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene50526 | -0.806522 | 7.90E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene58779 | -0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene62174 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene052936 | MS.gene63292 | 0.815225 | 1.03E-51 | -1.69E-46 |
| MS.gene052936 | MS.gene63502 | 0.817475 | 3.24E-52 | -1.69E-46 |
| MS.gene052936 | MS.gene65400 | -0.816718 | 4.79E-52 | -1.69E-46 |
| MS.gene052936 | MS.gene70326 | -0.806414 | 8.32E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene74228 | -0.802898 | 4.51E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene79879 | -0.805749 | 1.15E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene83125 | -0.802105 | 6.57E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene83516 | -0.802735 | 4.87E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene86841 | -0.802568 | 5.28E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene88929 | -0.804102 | 2.54E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene91801 | -0.802458 | 5.56E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene91963 | -0.803488 | 3.40E-49 | -1.69E-46 |
| MS.gene052936 | MS.gene92636 | -0.808192 | 3.49E-50 | -1.69E-46 |
| MS.gene052936 | MS.gene93362 | -0.8281 | 1.08E-54 | -1.69E-46 |
| MS.gene052936 | MS.gene94807 | -0.80191 | 7.21E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052936.t1 | MTR_4g013210 | 97.826 | 276 | 6 | 0 | 1 | 276 | 250 | 525 | 0.0 | 561 |
| MS.gene052936.t1 | MTR_4g013210 | 97.826 | 276 | 6 | 0 | 1 | 276 | 291 | 566 | 0.0 | 561 |
| MS.gene052936.t1 | MTR_4g013210 | 97.826 | 276 | 6 | 0 | 1 | 276 | 98 | 373 | 0.0 | 557 |
| MS.gene052936.t1 | MTR_4g013210 | 97.826 | 276 | 6 | 0 | 1 | 276 | 139 | 414 | 0.0 | 557 |
| MS.gene052936.t1 | MTR_4g011790 | 87.681 | 276 | 30 | 1 | 1 | 276 | 305 | 576 | 1.76e-176 | 500 |
| MS.gene052936.t1 | MTR_4g011790 | 87.681 | 276 | 30 | 1 | 1 | 276 | 296 | 567 | 2.33e-176 | 499 |
| MS.gene052936.t1 | MTR_4g011790 | 87.681 | 276 | 30 | 1 | 1 | 276 | 296 | 567 | 3.70e-176 | 500 |
| MS.gene052936.t1 | MTR_4g013210 | 97.685 | 216 | 5 | 0 | 1 | 216 | 250 | 465 | 1.41e-154 | 441 |
| MS.gene052936.t1 | MTR_4g013210 | 96.894 | 161 | 5 | 0 | 1 | 161 | 291 | 451 | 8.03e-112 | 331 |
| MS.gene052936.t1 | MTR_3g035130 | 31.950 | 241 | 141 | 8 | 6 | 243 | 240 | 460 | 1.59e-26 | 108 |
| MS.gene052936.t1 | MTR_3g035130 | 31.667 | 240 | 141 | 8 | 6 | 242 | 240 | 459 | 2.77e-25 | 104 |
| MS.gene052936.t1 | MTR_4g057730 | 30.093 | 216 | 136 | 6 | 65 | 276 | 306 | 510 | 8.79e-23 | 97.8 |
| MS.gene052936.t1 | MTR_1g063110 | 26.364 | 220 | 141 | 7 | 65 | 276 | 310 | 516 | 2.65e-20 | 90.5 |
| MS.gene052936.t1 | MTR_0803s0020 | 28.139 | 231 | 147 | 7 | 21 | 242 | 471 | 691 | 2.99e-20 | 90.9 |
| MS.gene052936.t1 | MTR_1g063120 | 27.313 | 227 | 148 | 7 | 56 | 276 | 305 | 520 | 7.56e-20 | 89.4 |
| MS.gene052936.t1 | MTR_1569s0010 | 28.054 | 221 | 136 | 5 | 65 | 276 | 297 | 503 | 1.70e-19 | 88.2 |
| MS.gene052936.t1 | MTR_1g104810 | 33.133 | 166 | 107 | 1 | 66 | 227 | 415 | 580 | 1.94e-19 | 88.2 |
| MS.gene052936.t1 | MTR_1g104810 | 33.133 | 166 | 107 | 1 | 66 | 227 | 348 | 513 | 2.32e-19 | 87.8 |
| MS.gene052936.t1 | MTR_2g095510 | 26.389 | 216 | 144 | 6 | 65 | 276 | 303 | 507 | 8.87e-19 | 86.3 |
| MS.gene052936.t1 | MTR_1g026310 | 29.493 | 217 | 136 | 7 | 65 | 276 | 324 | 528 | 1.24e-18 | 85.9 |
| MS.gene052936.t1 | MTR_4g077900 | 27.092 | 251 | 159 | 8 | 31 | 276 | 215 | 446 | 8.25e-18 | 83.2 |
| MS.gene052936.t1 | MTR_4g057730 | 29.518 | 166 | 112 | 4 | 65 | 226 | 306 | 470 | 1.54e-17 | 82.4 |
| MS.gene052936.t1 | MTR_3g460770 | 29.508 | 183 | 121 | 5 | 66 | 242 | 305 | 485 | 2.88e-17 | 81.6 |
| MS.gene052936.t1 | MTR_8g039720 | 27.189 | 217 | 145 | 6 | 31 | 242 | 299 | 507 | 3.70e-17 | 81.3 |
| MS.gene052936.t1 | MTR_5g027500 | 25.498 | 251 | 163 | 7 | 31 | 276 | 305 | 536 | 2.00e-16 | 79.3 |
| MS.gene052936.t1 | MTR_3g064420 | 28.509 | 228 | 130 | 8 | 69 | 275 | 306 | 521 | 1.15e-15 | 77.0 |
| MS.gene052936.t1 | MTR_4g128337 | 29.661 | 236 | 137 | 9 | 31 | 253 | 284 | 503 | 3.77e-15 | 75.5 |
| MS.gene052936.t1 | MTR_7g084850 | 27.542 | 236 | 146 | 11 | 31 | 250 | 452 | 678 | 7.69e-15 | 74.7 |
| MS.gene052936.t1 | MTR_2g030240 | 28.333 | 180 | 97 | 5 | 91 | 246 | 216 | 387 | 1.20e-14 | 73.9 |
| MS.gene052936.t1 | MTR_2g030240 | 28.333 | 180 | 97 | 5 | 91 | 246 | 310 | 481 | 1.43e-14 | 73.6 |
| MS.gene052936.t1 | MTR_5g027480 | 27.350 | 234 | 149 | 7 | 50 | 276 | 304 | 523 | 2.48e-14 | 73.2 |
| MS.gene052936.t1 | MTR_1054s0020 | 29.208 | 202 | 130 | 5 | 38 | 229 | 502 | 700 | 2.72e-14 | 73.2 |
| MS.gene052936.t1 | MTR_1g073180 | 27.189 | 217 | 140 | 8 | 65 | 276 | 321 | 524 | 3.74e-14 | 72.4 |
| MS.gene052936.t1 | MTR_1g073180 | 27.189 | 217 | 140 | 8 | 65 | 276 | 299 | 502 | 3.90e-14 | 72.4 |
| MS.gene052936.t1 | MTR_2g105570 | 29.677 | 155 | 98 | 5 | 96 | 242 | 341 | 492 | 1.99e-13 | 70.5 |
| MS.gene052936.t1 | MTR_4g057730 | 30.201 | 149 | 99 | 4 | 65 | 209 | 306 | 453 | 4.81e-13 | 68.9 |
| MS.gene052936.t1 | MTR_3g088880 | 25.000 | 216 | 147 | 6 | 65 | 276 | 320 | 524 | 5.16e-13 | 68.9 |
| MS.gene052936.t1 | MTR_5g007640 | 28.351 | 194 | 113 | 10 | 65 | 242 | 348 | 531 | 8.07e-13 | 68.6 |
| MS.gene052936.t1 | MTR_3g088870 | 25.346 | 217 | 145 | 7 | 65 | 276 | 322 | 526 | 1.47e-12 | 67.8 |
| MS.gene052936.t1 | MTR_2g044180 | 32.331 | 133 | 83 | 4 | 143 | 275 | 311 | 436 | 2.19e-12 | 67.0 |
| MS.gene052936.t1 | MTR_2g044180 | 32.331 | 133 | 83 | 4 | 143 | 275 | 402 | 527 | 2.43e-12 | 67.0 |
| MS.gene052936.t1 | MTR_5g009350 | 27.513 | 189 | 131 | 4 | 65 | 249 | 386 | 572 | 2.83e-12 | 67.0 |
| MS.gene052936.t1 | MTR_4g005750 | 28.218 | 202 | 130 | 7 | 50 | 242 | 290 | 485 | 2.92e-12 | 67.0 |
| MS.gene052936.t1 | MTR_5g008800 | 40.404 | 99 | 57 | 2 | 143 | 241 | 388 | 484 | 5.27e-12 | 66.2 |
| MS.gene052936.t1 | MTR_3g084470 | 25.541 | 231 | 131 | 8 | 70 | 270 | 450 | 669 | 6.90e-12 | 65.9 |
| MS.gene052936.t1 | MTR_4g121600 | 32.432 | 111 | 73 | 2 | 143 | 253 | 402 | 510 | 8.01e-12 | 65.5 |
| MS.gene052936.t1 | MTR_5g076220 | 31.469 | 143 | 91 | 3 | 133 | 275 | 381 | 516 | 1.43e-11 | 64.7 |
| MS.gene052936.t1 | MTR_1g090737 | 29.747 | 158 | 85 | 4 | 119 | 276 | 403 | 534 | 1.86e-11 | 64.3 |
| MS.gene052936.t1 | MTR_0161s0050 | 28.877 | 187 | 117 | 6 | 69 | 241 | 306 | 490 | 3.51e-11 | 63.5 |
| MS.gene052936.t1 | MTR_5g008820 | 34.343 | 99 | 63 | 2 | 143 | 241 | 386 | 482 | 5.27e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052936.t1 | AT3G16170 | 73.188 | 276 | 71 | 1 | 1 | 276 | 304 | 576 | 1.12e-149 | 432 |
| MS.gene052936.t1 | AT3G48990 | 32.661 | 248 | 144 | 8 | 32 | 276 | 255 | 482 | 1.87e-31 | 122 |
| MS.gene052936.t1 | AT4G05160 | 27.778 | 216 | 141 | 6 | 65 | 276 | 308 | 512 | 6.19e-22 | 95.5 |
| MS.gene052936.t1 | AT4G19010 | 27.490 | 251 | 158 | 8 | 31 | 276 | 299 | 530 | 1.94e-21 | 94.0 |
| MS.gene052936.t1 | AT1G20500 | 31.019 | 216 | 134 | 6 | 65 | 276 | 314 | 518 | 2.04e-21 | 94.0 |
| MS.gene052936.t1 | AT1G20480 | 25.442 | 283 | 174 | 9 | 1 | 276 | 281 | 533 | 1.84e-20 | 91.3 |
| MS.gene052936.t1 | AT1G20510 | 28.571 | 217 | 138 | 7 | 65 | 276 | 308 | 512 | 3.92e-20 | 90.1 |
| MS.gene052936.t1 | AT1G30520 | 28.511 | 235 | 135 | 7 | 29 | 241 | 259 | 482 | 6.15e-18 | 84.0 |
| MS.gene052936.t1 | AT1G30520 | 28.511 | 235 | 135 | 7 | 29 | 241 | 259 | 482 | 6.15e-18 | 84.0 |
| MS.gene052936.t1 | AT5G38120 | 30.000 | 220 | 126 | 8 | 66 | 276 | 318 | 518 | 2.21e-17 | 82.0 |
| MS.gene052936.t1 | AT1G68270 | 28.378 | 222 | 141 | 5 | 69 | 275 | 275 | 493 | 8.69e-17 | 80.5 |
| MS.gene052936.t1 | AT5G38120 | 30.457 | 197 | 117 | 7 | 66 | 251 | 318 | 505 | 1.12e-16 | 80.1 |
| MS.gene052936.t1 | AT1G62940 | 31.282 | 195 | 126 | 5 | 66 | 253 | 302 | 495 | 1.79e-16 | 79.3 |
| MS.gene052936.t1 | AT3G21240 | 26.792 | 265 | 158 | 11 | 1 | 253 | 269 | 509 | 5.84e-16 | 77.8 |
| MS.gene052936.t1 | AT5G36880 | 27.953 | 254 | 150 | 13 | 19 | 250 | 381 | 623 | 1.29e-15 | 77.0 |
| MS.gene052936.t1 | AT5G36880 | 27.953 | 254 | 150 | 13 | 19 | 250 | 381 | 623 | 1.29e-15 | 77.0 |
| MS.gene052936.t1 | AT5G36880 | 27.953 | 254 | 150 | 13 | 19 | 250 | 381 | 623 | 1.29e-15 | 77.0 |
| MS.gene052936.t1 | AT5G36880 | 27.953 | 254 | 150 | 13 | 19 | 250 | 381 | 623 | 1.29e-15 | 77.0 |
| MS.gene052936.t1 | AT3G21230 | 27.111 | 225 | 133 | 10 | 65 | 276 | 330 | 536 | 1.36e-15 | 77.0 |
| MS.gene052936.t1 | AT5G36880 | 27.953 | 254 | 150 | 13 | 19 | 250 | 431 | 673 | 1.43e-15 | 77.0 |
| MS.gene052936.t1 | AT1G20510 | 28.144 | 167 | 113 | 5 | 65 | 226 | 308 | 472 | 1.94e-15 | 76.3 |
| MS.gene052936.t1 | AT3G05970 | 30.723 | 166 | 111 | 1 | 66 | 227 | 418 | 583 | 2.99e-15 | 75.9 |
| MS.gene052936.t1 | AT1G65890 | 33.083 | 133 | 87 | 2 | 143 | 275 | 393 | 523 | 4.48e-15 | 75.5 |
| MS.gene052936.t1 | AT1G66120 | 28.070 | 228 | 138 | 7 | 30 | 242 | 274 | 490 | 5.63e-15 | 75.1 |
| MS.gene052936.t1 | AT3G21230 | 28.421 | 190 | 115 | 8 | 65 | 241 | 330 | 511 | 7.66e-15 | 74.7 |
| MS.gene052936.t1 | AT1G65880 | 25.856 | 263 | 164 | 8 | 31 | 275 | 275 | 524 | 2.07e-14 | 73.2 |
| MS.gene052936.t1 | AT3G21230 | 29.545 | 176 | 103 | 8 | 65 | 227 | 330 | 497 | 2.54e-14 | 73.2 |
| MS.gene052936.t1 | AT1G65060 | 26.906 | 223 | 139 | 7 | 31 | 242 | 299 | 508 | 2.69e-14 | 73.2 |
| MS.gene052936.t1 | AT5G27600 | 31.325 | 166 | 110 | 1 | 66 | 227 | 418 | 583 | 3.66e-14 | 72.8 |
| MS.gene052936.t1 | AT1G20560 | 36.090 | 133 | 73 | 4 | 143 | 275 | 394 | 514 | 1.77e-13 | 70.5 |
| MS.gene052936.t1 | AT1G20560 | 36.090 | 133 | 73 | 4 | 143 | 275 | 316 | 436 | 1.83e-13 | 70.5 |
| MS.gene052936.t1 | AT5G38120 | 30.588 | 170 | 100 | 6 | 66 | 226 | 318 | 478 | 2.07e-13 | 70.1 |
| MS.gene052936.t1 | AT5G38120 | 30.588 | 170 | 100 | 6 | 66 | 226 | 318 | 478 | 2.07e-13 | 70.1 |
| MS.gene052936.t1 | AT4G14070 | 27.189 | 217 | 136 | 6 | 70 | 270 | 471 | 681 | 2.80e-13 | 70.1 |
| MS.gene052936.t1 | AT1G21540 | 33.083 | 133 | 82 | 2 | 143 | 275 | 392 | 517 | 3.01e-13 | 69.7 |
| MS.gene052936.t1 | AT3G21240 | 26.778 | 239 | 139 | 11 | 1 | 227 | 269 | 483 | 1.09e-12 | 68.2 |
| MS.gene052936.t1 | AT3G21240 | 26.778 | 239 | 139 | 11 | 1 | 227 | 269 | 483 | 1.09e-12 | 68.2 |
| MS.gene052936.t1 | AT3G16910 | 29.936 | 157 | 90 | 5 | 119 | 275 | 394 | 530 | 1.15e-12 | 68.2 |
| MS.gene052936.t1 | AT1G21530 | 25.524 | 286 | 176 | 9 | 16 | 275 | 240 | 514 | 1.61e-12 | 67.8 |
| MS.gene052936.t1 | AT1G21530 | 32.090 | 134 | 86 | 2 | 142 | 275 | 388 | 516 | 1.90e-12 | 67.4 |
| MS.gene052936.t1 | AT1G77240 | 26.087 | 253 | 154 | 10 | 16 | 241 | 241 | 487 | 2.85e-12 | 67.0 |
| MS.gene052936.t1 | AT5G63380 | 25.909 | 220 | 142 | 7 | 64 | 276 | 321 | 526 | 4.07e-12 | 66.6 |
| MS.gene052936.t1 | AT1G51680 | 28.824 | 170 | 112 | 5 | 91 | 253 | 349 | 516 | 7.27e-12 | 65.9 |
| MS.gene052936.t1 | AT1G51680 | 28.497 | 193 | 119 | 7 | 91 | 276 | 349 | 529 | 7.34e-12 | 65.9 |
| MS.gene052936.t1 | AT1G64400 | 24.870 | 193 | 137 | 4 | 55 | 243 | 377 | 565 | 9.64e-12 | 65.5 |
| MS.gene052936.t1 | AT1G75960 | 35.897 | 117 | 71 | 3 | 134 | 250 | 383 | 495 | 4.25e-11 | 63.5 |
| MS.gene052936.t1 | AT5G16340 | 35.211 | 142 | 80 | 5 | 134 | 275 | 383 | 512 | 9.69e-11 | 62.4 |
Find 75 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGCTGACACTAAATTT+TGG | 0.193494 | 4.1:-82655288 | None:intergenic |
| CATCATTGTTTAAAGAATAT+TGG | 0.213595 | 4.1:+82656540 | MS.gene052936:CDS |
| AATTTAGTGTCAGCAGAATT+TGG | 0.241141 | 4.1:+82655292 | MS.gene052936:CDS |
| GCTTCCCATTCTTGCATAAC+AGG | 0.262858 | 4.1:-82656011 | None:intergenic |
| CACGGTAACCTTGTATTAAT+CGG | 0.269004 | 4.1:-82655664 | None:intergenic |
| CCCAAGTGGATAACTCTTCT+AGG | 0.269417 | 4.1:-82659151 | None:intergenic |
| TATCACTGGCCATCGTTTAT+TGG | 0.273179 | 4.1:+82656034 | MS.gene052936:CDS |
| GTAAGGTGCAAGTTTATCTT+TGG | 0.297335 | 4.1:-82659174 | None:intergenic |
| GCATTGTCAAATCCATTAAA+AGG | 0.298576 | 4.1:+82656173 | MS.gene052936:CDS |
| CATCGTTTATTGGAGCGATA+TGG | 0.337894 | 4.1:+82656044 | MS.gene052936:CDS |
| GTCTCAGAATGTTGTGTCTT+GGG | 0.343760 | 4.1:+82659029 | MS.gene052936:CDS |
| GGCTTACCACACAAAGAATA+TGG | 0.348017 | 4.1:+82659050 | MS.gene052936:CDS |
| GATGGATATTACATCATTCT+AGG | 0.360406 | 4.1:+82658446 | MS.gene052936:CDS |
| CAATATTCTTTAAACAATGA+TGG | 0.361902 | 4.1:-82656539 | None:intergenic |
| CTCAACCTGTTATGCAAGAA+TGG | 0.387119 | 4.1:+82656006 | MS.gene052936:CDS |
| TATTTCCATGTAGGTAACTA+AGG | 0.390753 | 4.1:+82658367 | MS.gene052936:intron |
| AAGGAATCATTTACGGAAGA+AGG | 0.399018 | 4.1:+82658386 | MS.gene052936:CDS |
| ATATCCAACTGAAGGATCTA+AGG | 0.400947 | 4.1:+82655332 | MS.gene052936:CDS |
| TTTCGTTTAACATCAGCTTC+TGG | 0.401757 | 4.1:-82659098 | None:intergenic |
| GGTAACTAAGGAATCATTTA+CGG | 0.408234 | 4.1:+82658379 | MS.gene052936:intron |
| TGCAAGGAACTTGCGTCTAA+TGG | 0.425487 | 4.1:+82655724 | MS.gene052936:CDS |
| TGTCTCAGAATGTTGTGTCT+TGG | 0.427969 | 4.1:+82659028 | MS.gene052936:CDS |
| AAAGAATATGGAGAAATTGT+TGG | 0.453282 | 4.1:+82659062 | MS.gene052936:CDS |
| CCATGTCACCATACCTTGTA+AGG | 0.457324 | 4.1:-82659191 | None:intergenic |
| ATCTGTTGTAACTGCATCTC+CGG | 0.459657 | 4.1:-82658420 | None:intergenic |
| AATCGAATCTGTTATAATAG+AGG | 0.460683 | 4.1:+82658881 | MS.gene052936:CDS |
| ATTAATCGGGCATACATAGT+TGG | 0.466685 | 4.1:-82655650 | None:intergenic |
| AATATTCTTTAAACAATGAT+GGG | 0.471095 | 4.1:-82656538 | None:intergenic |
| CTAACCTGCACTCCGGGTAA+TGG | 0.477390 | 4.1:-82656224 | None:intergenic |
| ACGGTAACCTTGTATTAATC+GGG | 0.478750 | 4.1:-82655663 | None:intergenic |
| AGATAAACTTGCACCTTACA+AGG | 0.483125 | 4.1:+82659178 | MS.gene052936:CDS |
| GAGCGTAAGGCAGGCACAGT+TGG | 0.488137 | 4.1:+82656197 | MS.gene052936:CDS |
| CATTCTTGCATAACAGGTTG+AGG | 0.493045 | 4.1:-82656005 | None:intergenic |
| GAAGAAGGTTTCTTTAAGAC+CGG | 0.495029 | 4.1:+82658401 | MS.gene052936:CDS |
| GCTGACACAGCTTGTAGCTC+AGG | 0.495695 | 4.1:-82655695 | None:intergenic |
| GATGCTATAACTGTATTCAC+TGG | 0.503554 | 4.1:+82655360 | MS.gene052936:CDS |
| ATCAATGTTCTAGTTTGTCA+TGG | 0.503981 | 4.1:+82656151 | MS.gene052936:intron |
| CATCAACTAACCTGCACTCC+GGG | 0.507644 | 4.1:-82656230 | None:intergenic |
| TCAACCTGTTATGCAAGAAT+GGG | 0.508086 | 4.1:+82656007 | MS.gene052936:CDS |
| AAAACCATTACCCGGAGTGC+AGG | 0.524416 | 4.1:+82656220 | MS.gene052936:CDS |
| TTAAAAGGTGAGCGTAAGGC+AGG | 0.525924 | 4.1:+82656188 | MS.gene052936:CDS |
| AACTCTTCTAGGCTTAGAGC+CGG | 0.531743 | 4.1:-82659140 | None:intergenic |
| GCAGTTACAACAGATAAAGA+TGG | 0.535005 | 4.1:+82658428 | MS.gene052936:CDS |
| TCCATTAAAAGGTGAGCGTA+AGG | 0.537596 | 4.1:+82656184 | MS.gene052936:CDS |
| ACACAACATTCTGAGACAGC+TGG | 0.542670 | 4.1:-82659023 | None:intergenic |
| TCAGCAGAATTTGGAAGAGA+TGG | 0.545260 | 4.1:+82655301 | MS.gene052936:CDS |
| CATGCTATTATTCAGATGTG+TGG | 0.551989 | 4.1:+82655969 | MS.gene052936:intron |
| GAATACAGTTATAGCATCAT+CGG | 0.552682 | 4.1:-82655355 | None:intergenic |
| TCGGCCTTAGATCCTTCAGT+TGG | 0.554813 | 4.1:-82655336 | None:intergenic |
| ATTTCTCCATATTCTTTGTG+TGG | 0.557741 | 4.1:-82659056 | None:intergenic |
| CAAGAATGGGAAGCTATCAC+TGG | 0.557923 | 4.1:+82656020 | MS.gene052936:CDS |
| ATGCTATTATTCAGATGTGT+GGG | 0.560738 | 4.1:+82655970 | MS.gene052936:intron |
| AATACAAGGTTACCGTGCAA+TGG | 0.566321 | 4.1:+82655670 | MS.gene052936:CDS |
| GGTCAAGATTCTTGCAGATG+AGG | 0.566623 | 4.1:+82656469 | MS.gene052936:intron |
| CTGTGTCAGCATCTGCTGCA+AGG | 0.579150 | 4.1:+82655708 | MS.gene052936:CDS |
| TGCAGACAGCTTATAGCCAC+CGG | 0.580145 | 4.1:-82658853 | None:intergenic |
| TACTAGTGCGGACATCATCA+AGG | 0.581799 | 4.1:+82658830 | MS.gene052936:CDS |
| GCGAGATGAAGAGTCAAAGC+CGG | 0.583000 | 4.1:+82659121 | MS.gene052936:CDS |
| GCCTAGAAGAGTTATCCACT+TGG | 0.591146 | 4.1:+82659150 | MS.gene052936:CDS |
| TTCTTGCAGATGAGGAGCGT+GGG | 0.594041 | 4.1:+82656477 | MS.gene052936:CDS |
| ACATCAACTAACCTGCACTC+CGG | 0.602640 | 4.1:-82656231 | None:intergenic |
| AAGTTTATCTTTGGCCCAAG+TGG | 0.603463 | 4.1:-82659165 | None:intergenic |
| CGTGAGTCATATCCAACTGA+AGG | 0.605168 | 4.1:+82655324 | MS.gene052936:CDS |
| AGTGCGGACATCATCAAGGC+CGG | 0.613064 | 4.1:+82658834 | MS.gene052936:CDS |
| ATGTATGCCCGATTAATACA+AGG | 0.621258 | 4.1:+82655656 | MS.gene052936:CDS |
| ATTCTTGCAGATGAGGAGCG+TGG | 0.628922 | 4.1:+82656476 | MS.gene052936:CDS |
| CCTAGAAGAGTTATCCACTT+GGG | 0.630017 | 4.1:+82659151 | MS.gene052936:CDS |
| GTAGCTCAGGATCCATTGCA+CGG | 0.663777 | 4.1:-82655682 | None:intergenic |
| GCGGACATCATCAAGGCCGG+TGG | 0.669750 | 4.1:+82658837 | MS.gene052936:CDS |
| ACAGTTGGAAAACCATTACC+CGG | 0.672971 | 4.1:+82656212 | MS.gene052936:CDS |
| AGAATATTGGAAACTTCCAG+AGG | 0.678041 | 4.1:+82656553 | MS.gene052936:CDS |
| ATTGGAGCGATATGGCATGA+CGG | 0.683780 | 4.1:+82656052 | MS.gene052936:CDS |
| CATATCGCTCCAATAAACGA+TGG | 0.698759 | 4.1:-82656043 | None:intergenic |
| AACAGGTTGAGGAAGTGCAG+AGG | 0.703474 | 4.1:-82655994 | None:intergenic |
| CTGTTTATCAGGTACTAGTG+CGG | 0.710653 | 4.1:+82658818 | MS.gene052936:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAATTAGCAAA+TGG | - | chr4.1:82656266-82656285 | None:intergenic | 10.0% |
| !! | ATTAAATAATTACTATTTGA+AGG | + | chr4.1:82655625-82655644 | MS.gene052936:intron | 10.0% |
| !!! | ATTTTTTAATTTGACTTAAT+CGG | + | chr4.1:82655839-82655858 | MS.gene052936:intron | 10.0% |
| !!! | TGAATTATTTTTGTTTATTT+AGG | + | chr4.1:82657129-82657148 | MS.gene052936:intron | 10.0% |
| !!! | TTTGCTAATTTATTTATTTT+TGG | + | chr4.1:82656266-82656285 | MS.gene052936:intron | 10.0% |
| !! | AATATTCTTTAAACAATGAT+GGG | - | chr4.1:82656541-82656560 | None:intergenic | 15.0% |
| !! | ATAATTCAGAATTTAAAAAG+AGG | - | chr4.1:82657117-82657136 | None:intergenic | 15.0% |
| !! | GAAATAATAAAATTTCTTAG+AGG | - | chr4.1:82658324-82658343 | None:intergenic | 15.0% |
| !! | GATAAAACTAAATGTTTATA+GGG | + | chr4.1:82656920-82656939 | MS.gene052936:intron | 15.0% |
| !! | GATTAATATTGTATATTGAT+AGG | - | chr4.1:82658261-82658280 | None:intergenic | 15.0% |
| !!! | AAATTTTATTATTTCCATGT+AGG | + | chr4.1:82658329-82658348 | MS.gene052936:intron | 15.0% |
| !! | AAAAATATCCTGATAAAACT+GGG | - | chr4.1:82657954-82657973 | None:intergenic | 20.0% |
| !! | CAAATAAATTATCACACATA+TGG | - | chr4.1:82657753-82657772 | None:intergenic | 20.0% |
| !! | CAATATTCTTTAAACAATGA+TGG | - | chr4.1:82656542-82656561 | None:intergenic | 20.0% |
| !! | CATCATTGTTTAAAGAATAT+TGG | + | chr4.1:82656540-82656559 | MS.gene052936:CDS | 20.0% |
| !! | GGATAAAACTAAATGTTTAT+AGG | + | chr4.1:82656919-82656938 | MS.gene052936:intron | 20.0% |
| !! | GTAATATACATTAGTGAATT+AGG | + | chr4.1:82657471-82657490 | MS.gene052936:intron | 20.0% |
| !! | GTAATTATTTAATCATGATG+AGG | - | chr4.1:82655618-82655637 | None:intergenic | 20.0% |
| !! | GTCAATATTGCAAAATTATT+AGG | - | chr4.1:82658664-82658683 | None:intergenic | 20.0% |
| !! | TAAAATTTCATTTACCTACA+TGG | - | chr4.1:82658346-82658365 | None:intergenic | 20.0% |
| !! | TTATATGCTAAGTGAAATAT+GGG | + | chr4.1:82656853-82656872 | MS.gene052936:intron | 20.0% |
| !!! | AATAATTTTGCAATATTGAC+TGG | + | chr4.1:82658664-82658683 | MS.gene052936:intron | 20.0% |
| !!! | CTATTTTTAGCCTTTTAAAA+AGG | + | chr4.1:82657978-82657997 | MS.gene052936:intron | 20.0% |
| !!! | TACTTTTGATTCTATCAATT+AGG | + | chr4.1:82657905-82657924 | MS.gene052936:intron | 20.0% |
| !!! | TAGTTTTGATTCTATCAATT+AGG | + | chr4.1:82657207-82657226 | MS.gene052936:intron | 20.0% |
| !!! | TATGGATGATTTTTATCATA+TGG | + | chr4.1:82656391-82656410 | MS.gene052936:intron | 20.0% |
| ! | AAACCATACAACTATATAAG+GGG | - | chr4.1:82658956-82658975 | None:intergenic | 25.0% |
| ! | AAAGAATATGGAGAAATTGT+TGG | + | chr4.1:82659062-82659081 | MS.gene052936:CDS | 25.0% |
| ! | AATATGTAAAAAGGACGATT+GGG | + | chr4.1:82657822-82657841 | MS.gene052936:intron | 25.0% |
| ! | AATCAAAAGTAGCAATGAAT+AGG | - | chr4.1:82657896-82657915 | None:intergenic | 25.0% |
| ! | AATCGAATCTGTTATAATAG+AGG | + | chr4.1:82658881-82658900 | MS.gene052936:CDS | 25.0% |
| ! | ACTCTATCAACTAAGTATAT+GGG | + | chr4.1:82658066-82658085 | MS.gene052936:intron | 25.0% |
| ! | AGTTATGATCCTAAATAAGT+AGG | + | chr4.1:82657239-82657258 | MS.gene052936:intron | 25.0% |
| ! | ATCTCTTGAAAGAATATCAA+AGG | + | chr4.1:82655778-82655797 | MS.gene052936:intron | 25.0% |
| ! | ATTCTATGATCAATAGCAAA+TGG | - | chr4.1:82656301-82656320 | None:intergenic | 25.0% |
| ! | CAAACCATACAACTATATAA+GGG | - | chr4.1:82658957-82658976 | None:intergenic | 25.0% |
| ! | GAAAAATATCCTGATAAAAC+TGG | - | chr4.1:82657955-82657974 | None:intergenic | 25.0% |
| ! | GTTATATGCTAAGTGAAATA+TGG | + | chr4.1:82656852-82656871 | MS.gene052936:intron | 25.0% |
| ! | TAAGGATTAACCTCAATAAA+AGG | + | chr4.1:82656800-82656819 | MS.gene052936:intron | 25.0% |
| ! | TAGTAAAAGTTAGATTGTGA+TGG | + | chr4.1:82658767-82658786 | MS.gene052936:intron | 25.0% |
| ! | TAGTAGAGAGAAAATGTTAT+GGG | - | chr4.1:82658143-82658162 | None:intergenic | 25.0% |
| ! | TATATGCTAAGTGAAATATG+GGG | + | chr4.1:82656854-82656873 | MS.gene052936:intron | 25.0% |
| ! | TCAAACCATACAACTATATA+AGG | - | chr4.1:82658958-82658977 | None:intergenic | 25.0% |
| ! | TCAATTCATTTATATGTAGC+TGG | + | chr4.1:82657584-82657603 | MS.gene052936:intron | 25.0% |
| ! | TGCTATTGATCATAGAATAT+GGG | + | chr4.1:82656303-82656322 | MS.gene052936:intron | 25.0% |
| ! | TTAACCTCAATAAAAGGAAT+AGG | + | chr4.1:82656806-82656825 | MS.gene052936:intron | 25.0% |
| !! | AAAAATAGGATCCTTGATTT+TGG | + | chr4.1:82657868-82657887 | MS.gene052936:intron | 25.0% |
| !! | ATGATTTTTATCATATGGTC+TGG | + | chr4.1:82656396-82656415 | MS.gene052936:intron | 25.0% |
| !! | CTTGCTTTGAATATGTAAAA+AGG | + | chr4.1:82657813-82657832 | MS.gene052936:intron | 25.0% |
| !! | TGATTTTTATCATATGGTCT+GGG | + | chr4.1:82656397-82656416 | MS.gene052936:intron | 25.0% |
| !! | TTGCTATTGATCATAGAATA+TGG | + | chr4.1:82656302-82656321 | MS.gene052936:intron | 25.0% |
| !!! | AAAGCTGTTTTCTATGATTA+TGG | - | chr4.1:82655458-82655477 | None:intergenic | 25.0% |
| !!! | AAATCAAGGATCCTATTTTT+TGG | - | chr4.1:82657868-82657887 | None:intergenic | 25.0% |
| !!! | AATCAAGGATCCTATTTTTT+GGG | - | chr4.1:82657867-82657886 | None:intergenic | 25.0% |
| !!! | AGCATGGTTTTTAATTGTAT+TGG | - | chr4.1:82658599-82658618 | None:intergenic | 25.0% |
| !!! | GCTTTTAAGATGTAGAAATT+AGG | + | chr4.1:82657536-82657555 | MS.gene052936:intron | 25.0% |
| !!! | TTTTAACAGCATTTGATGAT+TGG | + | chr4.1:82657296-82657315 | MS.gene052936:intron | 25.0% |
| AAAAACTTGCAAGTTCAAAG+CGG | + | chr4.1:82658042-82658061 | MS.gene052936:intron | 30.0% | |
| AAACTAACAACGCTAATTGA+TGG | - | chr4.1:82657193-82657212 | None:intergenic | 30.0% | |
| AATTTAGTGTCAGCAGAATT+TGG | + | chr4.1:82655292-82655311 | MS.gene052936:CDS | 30.0% | |
| AGATAAAAATCCTTGATGCA+TGG | - | chr4.1:82655762-82655781 | None:intergenic | 30.0% | |
| AGATTCATGTTGGGAAAAAT+TGG | - | chr4.1:82658575-82658594 | None:intergenic | 30.0% | |
| ATAGGAGAGAGGAAAATTTA+GGG | + | chr4.1:82656963-82656982 | MS.gene052936:intron | 30.0% | |
| ATGAATAGGATCCAAAATCA+AGG | - | chr4.1:82657882-82657901 | None:intergenic | 30.0% | |
| ATGCTATTATTCAGATGTGT+GGG | + | chr4.1:82655970-82655989 | MS.gene052936:intron | 30.0% | |
| ATTTCTCCATATTCTTTGTG+TGG | - | chr4.1:82659059-82659078 | None:intergenic | 30.0% | |
| CGATGATAAAATCAGATGTA+GGG | - | chr4.1:82658744-82658763 | None:intergenic | 30.0% | |
| CTCAATAAAAGGAATAGGTT+AGG | + | chr4.1:82656811-82656830 | MS.gene052936:intron | 30.0% | |
| GAATACAGTTATAGCATCAT+CGG | - | chr4.1:82655358-82655377 | None:intergenic | 30.0% | |
| GAATATGTAAAAAGGACGAT+TGG | + | chr4.1:82657821-82657840 | MS.gene052936:intron | 30.0% | |
| GACTCTATCAACTAAGTATA+TGG | + | chr4.1:82658065-82658084 | MS.gene052936:intron | 30.0% | |
| GATGGATATTACATCATTCT+AGG | + | chr4.1:82658446-82658465 | MS.gene052936:CDS | 30.0% | |
| GATTGCAAATAGTATGCATA+TGG | - | chr4.1:82655557-82655576 | None:intergenic | 30.0% | |
| GATTTCAATGCCCAAAAAAT+AGG | + | chr4.1:82657854-82657873 | MS.gene052936:intron | 30.0% | |
| GCATTGTCAAATCCATTAAA+AGG | + | chr4.1:82656173-82656192 | MS.gene052936:CDS | 30.0% | |
| GGTAACTAAGGAATCATTTA+CGG | + | chr4.1:82658379-82658398 | MS.gene052936:intron | 30.0% | |
| GTAGTAGAGAGAAAATGTTA+TGG | - | chr4.1:82658144-82658163 | None:intergenic | 30.0% | |
| GTCTGAATTTCAGAAAATGA+TGG | + | chr4.1:82655807-82655826 | MS.gene052936:intron | 30.0% | |
| TATAACAAATGTAGAGCCTT+AGG | - | chr4.1:82656742-82656761 | None:intergenic | 30.0% | |
| TATAGGAGAGAGGAAAATTT+AGG | + | chr4.1:82656962-82656981 | MS.gene052936:intron | 30.0% | |
| TATTTCCATGTAGGTAACTA+AGG | + | chr4.1:82658367-82658386 | MS.gene052936:intron | 30.0% | |
| TCATGCTCAAACAAAACATA+TGG | - | chr4.1:82657671-82657690 | None:intergenic | 30.0% | |
| TGTAGTAAAACTTATTGGTG+TGG | + | chr4.1:82655864-82655883 | MS.gene052936:intron | 30.0% | |
| TGTATTGGAAGATTCATGTT+GGG | - | chr4.1:82658584-82658603 | None:intergenic | 30.0% | |
| TTGTATTGGAAGATTCATGT+TGG | - | chr4.1:82658585-82658604 | None:intergenic | 30.0% | |
| ! | AAACATTCTGAAAATACCTC+TGG | - | chr4.1:82656572-82656591 | None:intergenic | 30.0% |
| ! | AAGTGTTATCGGCAATTTTT+AGG | + | chr4.1:82658621-82658640 | MS.gene052936:intron | 30.0% |
| ! | ACATGATAATTCCACTGATT+AGG | + | chr4.1:82657083-82657102 | MS.gene052936:intron | 30.0% |
| ! | AGCTTTTACATGACATATGA+TGG | + | chr4.1:82655472-82655491 | MS.gene052936:intron | 30.0% |
| ! | AGGAAAATTTAGGGTGAAAT+TGG | + | chr4.1:82656972-82656991 | MS.gene052936:intron | 30.0% |
| ! | ATTCTGCTGACACTAAATTT+TGG | - | chr4.1:82655291-82655310 | None:intergenic | 30.0% |
| ! | ATTTCTCTACGCATGTTTTA+TGG | + | chr4.1:82658485-82658504 | MS.gene052936:intron | 30.0% |
| ! | CCTACATCTGATTTTATCAT+CGG | + | chr4.1:82658742-82658761 | MS.gene052936:intron | 30.0% |
| ! | CTAACCTATTCCTTTTATTG+AGG | - | chr4.1:82656813-82656832 | None:intergenic | 30.0% |
| ! | TGATTTTCTGTGTGTATAAC+AGG | + | chr4.1:82656448-82656467 | MS.gene052936:intron | 30.0% |
| ! | TGCATTAGTCATACTTTTCT+TGG | + | chr4.1:82657771-82657790 | MS.gene052936:intron | 30.0% |
| !! | ATCAATGTTCTAGTTTGTCA+TGG | + | chr4.1:82656151-82656170 | MS.gene052936:intron | 30.0% |
| !! | TAAGGCTCTACATTTGTTAT+AGG | + | chr4.1:82656741-82656760 | MS.gene052936:intron | 30.0% |
| !! | TATTATGACCCAGTTTTATC+AGG | + | chr4.1:82657943-82657962 | MS.gene052936:intron | 30.0% |
| !!! | AGCCTTTTAAAAAGGCATTT+GGG | + | chr4.1:82657986-82658005 | MS.gene052936:intron | 30.0% |
| !!! | TAGCCTTTTAAAAAGGCATT+TGG | + | chr4.1:82657985-82658004 | MS.gene052936:intron | 30.0% |
| AAAACTTGCAAGTTCAAAGC+GGG | + | chr4.1:82658043-82658062 | MS.gene052936:intron | 35.0% | |
| AAGGAATCATTTACGGAAGA+AGG | + | chr4.1:82658386-82658405 | MS.gene052936:CDS | 35.0% | |
| AATTGGAAAGATCCAGATCA+CGG | - | chr4.1:82658558-82658577 | None:intergenic | 35.0% | |
| ACGAAAACAGAGGTTTGATT+TGG | - | chr4.1:82658166-82658185 | None:intergenic | 35.0% | |
| ACGGTAACCTTGTATTAATC+GGG | - | chr4.1:82655666-82655685 | None:intergenic | 35.0% | |
| ACTGCCAAATTGTCTAAACA+TGG | - | chr4.1:82657725-82657744 | None:intergenic | 35.0% | |
| AGAATATTGGAAACTTCCAG+AGG | + | chr4.1:82656553-82656572 | MS.gene052936:CDS | 35.0% | |
| AGATAAACTTGCACCTTACA+AGG | + | chr4.1:82659178-82659197 | MS.gene052936:CDS | 35.0% | |
| AGATGTAGAAATTAGGCTGA+AGG | + | chr4.1:82657543-82657562 | MS.gene052936:intron | 35.0% | |
| AGCATGAAAAACTAGAGAGA+AGG | + | chr4.1:82657684-82657703 | MS.gene052936:intron | 35.0% | |
| AGGACCATGTTTAGACAATT+TGG | + | chr4.1:82657718-82657737 | MS.gene052936:intron | 35.0% | |
| AGGTAGAAAATCCTAATCAG+TGG | - | chr4.1:82657097-82657116 | None:intergenic | 35.0% | |
| AGTTATTGTTCCATGCATCA+AGG | + | chr4.1:82655749-82655768 | MS.gene052936:intron | 35.0% | |
| ATATCCAACTGAAGGATCTA+AGG | + | chr4.1:82655332-82655351 | MS.gene052936:CDS | 35.0% | |
| ATGTATGCCCGATTAATACA+AGG | + | chr4.1:82655656-82655675 | MS.gene052936:CDS | 35.0% | |
| ATTAATCGGGCATACATAGT+TGG | - | chr4.1:82655653-82655672 | None:intergenic | 35.0% | |
| CAACCCCTTATATAGTTGTA+TGG | + | chr4.1:82658950-82658969 | MS.gene052936:intron | 35.0% | |
| CACGGTAACCTTGTATTAAT+CGG | - | chr4.1:82655667-82655686 | None:intergenic | 35.0% | |
| CATAAAAACATGTGAGCTCA+AGG | + | chr4.1:82657345-82657364 | MS.gene052936:intron | 35.0% | |
| CATGCTATTATTCAGATGTG+TGG | + | chr4.1:82655969-82655988 | MS.gene052936:intron | 35.0% | |
| CCGATGATAAAATCAGATGT+AGG | - | chr4.1:82658745-82658764 | None:intergenic | 35.0% | |
| CCTAAATAAGTAGGATAACC+AGG | + | chr4.1:82657248-82657267 | MS.gene052936:intron | 35.0% | |
| CCTGGTTATCCTACTTATTT+AGG | - | chr4.1:82657251-82657270 | None:intergenic | 35.0% | |
| CGTATCATTCTTATCAGCAT+TGG | + | chr4.1:82655387-82655406 | MS.gene052936:intron | 35.0% | |
| GAATAGAGAGAGTTCTCATT+GGG | + | chr4.1:82656898-82656917 | MS.gene052936:intron | 35.0% | |
| GAATTATCATGTGCCTTTCT+TGG | - | chr4.1:82657075-82657094 | None:intergenic | 35.0% | |
| GATGCTATAACTGTATTCAC+TGG | + | chr4.1:82655360-82655379 | MS.gene052936:CDS | 35.0% | |
| GCAGTTACAACAGATAAAGA+TGG | + | chr4.1:82658428-82658447 | MS.gene052936:CDS | 35.0% | |
| GGGAATGAAAAAAATGAAGC+CGG | + | chr4.1:82656497-82656516 | MS.gene052936:CDS | 35.0% | |
| GTAAACAGATTATGCAACAG+TGG | - | chr4.1:82656347-82656366 | None:intergenic | 35.0% | |
| GTAAGGTGCAAGTTTATCTT+TGG | - | chr4.1:82659177-82659196 | None:intergenic | 35.0% | |
| TACCTGATAAACAGTAGAGA+AGG | - | chr4.1:82658812-82658831 | None:intergenic | 35.0% | |
| TACCTTCTCTACTGTTTATC+AGG | + | chr4.1:82658807-82658826 | MS.gene052936:intron | 35.0% | |
| TATGGAAATTGATCTGTGCT+TGG | - | chr4.1:82657653-82657672 | None:intergenic | 35.0% | |
| TCAACCTGTTATGCAAGAAT+GGG | + | chr4.1:82656007-82656026 | MS.gene052936:CDS | 35.0% | |
| TCGGAAGCAATTTATTGTCA+TGG | - | chr4.1:82657615-82657634 | None:intergenic | 35.0% | |
| TCTGTTATAATAGAGGCAAG+TGG | + | chr4.1:82658888-82658907 | MS.gene052936:intron | 35.0% | |
| TGATTCCTTAGTTACCTACA+TGG | - | chr4.1:82658375-82658394 | None:intergenic | 35.0% | |
| TTTCGTTTAACATCAGCTTC+TGG | - | chr4.1:82659101-82659120 | None:intergenic | 35.0% | |
| TTTGAGCAACAGAAGTTCTA+TGG | + | chr4.1:82656774-82656793 | MS.gene052936:intron | 35.0% | |
| ! | AACCATGCTTGAAGTGTTAT+CGG | + | chr4.1:82658610-82658629 | MS.gene052936:intron | 35.0% |
| ! | AATCATCCATACTGCTGTTT+AGG | - | chr4.1:82656382-82656401 | None:intergenic | 35.0% |
| ! | ATCATCCATACTGCTGTTTA+GGG | - | chr4.1:82656381-82656400 | None:intergenic | 35.0% |
| ! | GCTATGGTTTTCACATCTTA+TGG | + | chr4.1:82658910-82658929 | MS.gene052936:intron | 35.0% |
| ! | TGCCCAAATGCCTTTTTAAA+AGG | - | chr4.1:82657991-82658010 | None:intergenic | 35.0% |
| !! | GAAGAAGGTTTCTTTAAGAC+CGG | + | chr4.1:82658401-82658420 | MS.gene052936:CDS | 35.0% |
| !! | GTTAGGCGCTGAAATTAATT+AGG | + | chr4.1:82656828-82656847 | MS.gene052936:intron | 35.0% |
| !! | TTACATCATTCTAGGACGTA+AGG | + | chr4.1:82658454-82658473 | MS.gene052936:intron | 35.0% |
| !!! | CAGAGTCACAGTTTTAGAAA+CGG | - | chr4.1:82658106-82658125 | None:intergenic | 35.0% |
| AAATAGCAAGAACGAGATCC+TGG | - | chr4.1:82657269-82657288 | None:intergenic | 40.0% | |
| AAGTTTATCTTTGGCCCAAG+TGG | - | chr4.1:82659168-82659187 | None:intergenic | 40.0% | |
| AATACAAGGTTACCGTGCAA+TGG | + | chr4.1:82655670-82655689 | MS.gene052936:CDS | 40.0% | |
| ACAGTTGGAAAACCATTACC+CGG | + | chr4.1:82656212-82656231 | MS.gene052936:CDS | 40.0% | |
| AGAAATCCTCACGAAAACAG+AGG | - | chr4.1:82658176-82658195 | None:intergenic | 40.0% | |
| AGTGAAATATGGGGAAGAGT+AGG | + | chr4.1:82656863-82656882 | MS.gene052936:intron | 40.0% | |
| AGTGGGCATAACAAGGAAAT+AGG | - | chr4.1:82656714-82656733 | None:intergenic | 40.0% | |
| AGTGGTTGGAAATACGTCTT+TGG | + | chr4.1:82655589-82655608 | MS.gene052936:intron | 40.0% | |
| ATAATAGAGGCAAGTGGCTA+TGG | + | chr4.1:82658894-82658913 | MS.gene052936:intron | 40.0% | |
| ATCTGTTGTAACTGCATCTC+CGG | - | chr4.1:82658423-82658442 | None:intergenic | 40.0% | |
| CATATCGCTCCAATAAACGA+TGG | - | chr4.1:82656046-82656065 | None:intergenic | 40.0% | |
| CATCGTTTATTGGAGCGATA+TGG | + | chr4.1:82656044-82656063 | MS.gene052936:CDS | 40.0% | |
| CATTCTTGCATAACAGGTTG+AGG | - | chr4.1:82656008-82656027 | None:intergenic | 40.0% | |
| CCTAGAAGAGTTATCCACTT+GGG | + | chr4.1:82659151-82659170 | MS.gene052936:CDS | 40.0% | |
| CGGCGTGTAGTAAAACTTAT+TGG | + | chr4.1:82655859-82655878 | MS.gene052936:intron | 40.0% | |
| CGTATGCTGCAGAGAAATAT+AGG | + | chr4.1:82656945-82656964 | MS.gene052936:intron | 40.0% | |
| CTCAACCTGTTATGCAAGAA+TGG | + | chr4.1:82656006-82656025 | MS.gene052936:CDS | 40.0% | |
| CTGTTTATCAGGTACTAGTG+CGG | + | chr4.1:82658818-82658837 | MS.gene052936:intron | 40.0% | |
| GAGAGAAGGTCATGAGATTT+AGG | + | chr4.1:82657698-82657717 | MS.gene052936:intron | 40.0% | |
| GAGGATTTCTCTCTGTTGTA+AGG | + | chr4.1:82658186-82658205 | MS.gene052936:intron | 40.0% | |
| GGAATAGAGAGAGTTCTCAT+TGG | + | chr4.1:82656897-82656916 | MS.gene052936:intron | 40.0% | |
| GGCTTACCACACAAAGAATA+TGG | + | chr4.1:82659050-82659069 | MS.gene052936:CDS | 40.0% | |
| GTCTCAGAATGTTGTGTCTT+GGG | + | chr4.1:82659029-82659048 | MS.gene052936:CDS | 40.0% | |
| GTGAAATATGGGGAAGAGTA+GGG | + | chr4.1:82656864-82656883 | MS.gene052936:intron | 40.0% | |
| TAAAAGCCCTTTGAGCTTGT+TGG | - | chr4.1:82657523-82657542 | None:intergenic | 40.0% | |
| TAGAGCCTTAGGATAGTAGT+GGG | - | chr4.1:82656731-82656750 | None:intergenic | 40.0% | |
| TATCACTGGCCATCGTTTAT+TGG | + | chr4.1:82656034-82656053 | MS.gene052936:CDS | 40.0% | |
| TCAGCAGAATTTGGAAGAGA+TGG | + | chr4.1:82655301-82655320 | MS.gene052936:CDS | 40.0% | |
| TCCATTAAAAGGTGAGCGTA+AGG | + | chr4.1:82656184-82656203 | MS.gene052936:CDS | 40.0% | |
| TGCAGAGAAATATAGGAGAG+AGG | + | chr4.1:82656952-82656971 | MS.gene052936:intron | 40.0% | |
| TGTCTCAGAATGTTGTGTCT+TGG | + | chr4.1:82659028-82659047 | MS.gene052936:CDS | 40.0% | |
| TTAGCACAATAACCGTGATC+TGG | + | chr4.1:82658543-82658562 | MS.gene052936:intron | 40.0% | |
| TTATGCCCACTACTATCCTA+AGG | + | chr4.1:82656723-82656742 | MS.gene052936:intron | 40.0% | |
| ! | AAAAGCCCTTTGAGCTTGTT+GGG | - | chr4.1:82657522-82657541 | None:intergenic | 40.0% |
| ! | ACAGAAGTTCTATGGTGCTA+AGG | + | chr4.1:82656782-82656801 | MS.gene052936:intron | 40.0% |
| ! | ATCAAACCTCTGTTTTCGTG+AGG | + | chr4.1:82658167-82658186 | MS.gene052936:intron | 40.0% |
| ! | CAAGTACATCTGTGACTTGT+TGG | - | chr4.1:82657797-82657816 | None:intergenic | 40.0% |
| ! | GAAATTGGTCACTTTGTCCT+AGG | + | chr4.1:82656987-82657006 | MS.gene052936:intron | 40.0% |
| ! | TCATCCATACTGCTGTTTAG+GGG | - | chr4.1:82656380-82656399 | None:intergenic | 40.0% |
| !! | CAGCATTGGTTTGTAGTCTA+GGG | + | chr4.1:82655401-82655420 | MS.gene052936:intron | 40.0% |
| !! | TCAGCATTGGTTTGTAGTCT+AGG | + | chr4.1:82655400-82655419 | MS.gene052936:intron | 40.0% |
| !!! | TCGGCAATTTTTAGGACACA+TGG | + | chr4.1:82658629-82658648 | MS.gene052936:intron | 40.0% |
| AAAATGTTATGGGCCCCTGT+GGG | - | chr4.1:82658133-82658152 | None:intergenic | 45.0% | |
| AACTCTTCTAGGCTTAGAGC+CGG | - | chr4.1:82659143-82659162 | None:intergenic | 45.0% | |
| ACACACCCAACAAGCTCAAA+GGG | + | chr4.1:82657514-82657533 | MS.gene052936:intron | 45.0% | |
| ACATCAACTAACCTGCACTC+CGG | - | chr4.1:82656234-82656253 | None:intergenic | 45.0% | |
| AGAAATTAGGCTGAAGGCAG+AGG | + | chr4.1:82657549-82657568 | MS.gene052936:intron | 45.0% | |
| ATCATGTGCCTTTCTTGGTC+TGG | - | chr4.1:82657070-82657089 | None:intergenic | 45.0% | |
| ATTGGAGCGATATGGCATGA+CGG | + | chr4.1:82656052-82656071 | MS.gene052936:CDS | 45.0% | |
| CAAGAATGGGAAGCTATCAC+TGG | + | chr4.1:82656020-82656039 | MS.gene052936:CDS | 45.0% | |
| CAGCAATACCAGACCAAGAA+AGG | + | chr4.1:82657059-82657078 | MS.gene052936:intron | 45.0% | |
| CCCAAGTGGATAACTCTTCT+AGG | - | chr4.1:82659154-82659173 | None:intergenic | 45.0% | |
| CGTGAGTCATATCCAACTGA+AGG | + | chr4.1:82655324-82655343 | MS.gene052936:CDS | 45.0% | |
| CTTTCTTGGTCTGGTATTGC+TGG | - | chr4.1:82657061-82657080 | None:intergenic | 45.0% | |
| GCCTAGAAGAGTTATCCACT+TGG | + | chr4.1:82659150-82659169 | MS.gene052936:CDS | 45.0% | |
| GCTTCCCATTCTTGCATAAC+AGG | - | chr4.1:82656014-82656033 | None:intergenic | 45.0% | |
| GGTCAAGATTCTTGCAGATG+AGG | + | chr4.1:82656469-82656488 | MS.gene052936:intron | 45.0% | |
| GTAGAGCCTTAGGATAGTAG+TGG | - | chr4.1:82656732-82656751 | None:intergenic | 45.0% | |
| GTGTGGCAATTTACCATGCA+TGG | + | chr4.1:82655881-82655900 | MS.gene052936:intron | 45.0% | |
| TACTAGTGCGGACATCATCA+AGG | + | chr4.1:82658830-82658849 | MS.gene052936:CDS | 45.0% | |
| TGCAAGGAACTTGCGTCTAA+TGG | + | chr4.1:82655724-82655743 | MS.gene052936:CDS | 45.0% | |
| TGCCGATAACACTTCAAGCA+TGG | - | chr4.1:82658615-82658634 | None:intergenic | 45.0% | |
| TTAAAAGGTGAGCGTAAGGC+AGG | + | chr4.1:82656188-82656207 | MS.gene052936:CDS | 45.0% | |
| ! | AGGTGTTATGGATGCTTCTG+TGG | + | chr4.1:82657034-82657053 | MS.gene052936:intron | 45.0% |
| ! | CATCCATACTGCTGTTTAGG+GGG | - | chr4.1:82656379-82656398 | None:intergenic | 45.0% |
| ! | GATATGGCATGACGGAAGTA+AGG | + | chr4.1:82656060-82656079 | MS.gene052936:intron | 45.0% |
| ! | GCCTTACGCTCACCTTTTAA+TGG | - | chr4.1:82656188-82656207 | None:intergenic | 45.0% |
| ! | GGTGTTATGGATGCTTCTGT+GGG | + | chr4.1:82657035-82657054 | MS.gene052936:intron | 45.0% |
| !! | ACACAACATTCTGAGACAGC+TGG | - | chr4.1:82659026-82659045 | None:intergenic | 45.0% |
| !! | ATTGGTTTGTAGTCTAGGGC+TGG | + | chr4.1:82655405-82655424 | MS.gene052936:intron | 45.0% |
| !! | GGATAGTAGTGGGCATAACA+AGG | - | chr4.1:82656721-82656740 | None:intergenic | 45.0% |
| AAAACCATTACCCGGAGTGC+AGG | + | chr4.1:82656220-82656239 | MS.gene052936:CDS | 50.0% | |
| AAATGTTATGGGCCCCTGTG+GGG | - | chr4.1:82658132-82658151 | None:intergenic | 50.0% | |
| AGACCCCCTAAACAGCAGTA+TGG | + | chr4.1:82656373-82656392 | MS.gene052936:intron | 50.0% | |
| ATTCTTGCAGATGAGGAGCG+TGG | + | chr4.1:82656476-82656495 | MS.gene052936:CDS | 50.0% | |
| CACACACCCAACAAGCTCAA+AGG | + | chr4.1:82657513-82657532 | MS.gene052936:intron | 50.0% | |
| CATCAACTAACCTGCACTCC+GGG | - | chr4.1:82656233-82656252 | None:intergenic | 50.0% | |
| GAAAATGTTATGGGCCCCTG+TGG | - | chr4.1:82658134-82658153 | None:intergenic | 50.0% | |
| GAAGAGTAGGGATCTTAGGG+AGG | + | chr4.1:82656876-82656895 | MS.gene052936:intron | 50.0% | |
| GACAGCTGGATGCTGCAAAA+AGG | - | chr4.1:82659012-82659031 | None:intergenic | 50.0% | |
| GCAATCAACTGTAGTCGCAG+TGG | + | chr4.1:82655571-82655590 | MS.gene052936:intron | 50.0% | |
| GCAGCAAGCAATCTTCACCT+AGG | - | chr4.1:82657007-82657026 | None:intergenic | 50.0% | |
| GCGAGATGAAGAGTCAAAGC+CGG | + | chr4.1:82659121-82659140 | MS.gene052936:CDS | 50.0% | |
| GCTGCAGTCTCTAGGTGTTA+TGG | + | chr4.1:82657022-82657041 | MS.gene052936:intron | 50.0% | |
| GGGGAAGAGTAGGGATCTTA+GGG | + | chr4.1:82656873-82656892 | MS.gene052936:intron | 50.0% | |
| GTAGCTCAGGATCCATTGCA+CGG | - | chr4.1:82655685-82655704 | None:intergenic | 50.0% | |
| TCAACTGTAGTCGCAGTGGT+TGG | + | chr4.1:82655575-82655594 | MS.gene052936:intron | 50.0% | |
| TCGGCCTTAGATCCTTCAGT+TGG | - | chr4.1:82655339-82655358 | None:intergenic | 50.0% | |
| TGCAGACAGCTTATAGCCAC+CGG | - | chr4.1:82658856-82658875 | None:intergenic | 50.0% | |
| TGGGGAAGAGTAGGGATCTT+AGG | + | chr4.1:82656872-82656891 | MS.gene052936:intron | 50.0% | |
| TTGGTGCGTACGAATGCTCT+CGG | - | chr4.1:82657634-82657653 | None:intergenic | 50.0% | |
| ! | AACAGGTTGAGGAAGTGCAG+AGG | - | chr4.1:82655997-82656016 | None:intergenic | 50.0% |
| ! | GATTGCTTGCTGCAGTCTCT+AGG | + | chr4.1:82657014-82657033 | MS.gene052936:intron | 50.0% |
| ! | GCTTTTAACGCAAAGCTCGC+CGG | - | chr4.1:82656519-82656538 | None:intergenic | 50.0% |
| ! | TTCTTGCAGATGAGGAGCGT+GGG | + | chr4.1:82656477-82656496 | MS.gene052936:CDS | 50.0% |
| AATGTTATGGGCCCCTGTGG+GGG | - | chr4.1:82658131-82658150 | None:intergenic | 55.0% | |
| ACTGCAGCTGAGTCCATGCA+TGG | - | chr4.1:82655897-82655916 | None:intergenic | 55.0% | |
| AGTGCGGACATCATCAAGGC+CGG | + | chr4.1:82658834-82658853 | MS.gene052936:CDS | 55.0% | |
| CTAACCTGCACTCCGGGTAA+TGG | - | chr4.1:82656227-82656246 | None:intergenic | 55.0% | |
| CTGTGTCAGCATCTGCTGCA+AGG | + | chr4.1:82655708-82655727 | MS.gene052936:CDS | 55.0% | |
| GCTGACACAGCTTGTAGCTC+AGG | - | chr4.1:82655698-82655717 | None:intergenic | 55.0% | |
| ATGTTATGGGCCCCTGTGGG+GGG | - | chr4.1:82658130-82658149 | None:intergenic | 60.0% | |
| GAGCGTAAGGCAGGCACAGT+TGG | + | chr4.1:82656197-82656216 | MS.gene052936:CDS | 60.0% | |
| TGTGACTCTGTCCCCCCACA+GGG | + | chr4.1:82658116-82658135 | MS.gene052936:intron | 60.0% | |
| CTGTGACTCTGTCCCCCCAC+AGG | + | chr4.1:82658115-82658134 | MS.gene052936:intron | 65.0% | |
| GCGGACATCATCAAGGCCGG+TGG | + | chr4.1:82658837-82658856 | MS.gene052936:CDS | 65.0% | |
| GTGACTCTGTCCCCCCACAG+GGG | + | chr4.1:82658117-82658136 | MS.gene052936:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 82655276 | 82659199 | 82655276 | ID=MS.gene052936 |
| chr4.1 | mRNA | 82655276 | 82659199 | 82655276 | ID=MS.gene052936.t1;Parent=MS.gene052936 |
| chr4.1 | exon | 82655276 | 82655383 | 82655276 | ID=MS.gene052936.t1.exon1;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82655276 | 82655383 | 82655276 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82655647 | 82655745 | 82655647 | ID=MS.gene052936.t1.exon2;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82655647 | 82655745 | 82655647 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82655984 | 82656076 | 82655984 | ID=MS.gene052936.t1.exon3;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82655984 | 82656076 | 82655984 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82656164 | 82656241 | 82656164 | ID=MS.gene052936.t1.exon4;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82656164 | 82656241 | 82656164 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82656470 | 82656574 | 82656470 | ID=MS.gene052936.t1.exon5;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82656470 | 82656574 | 82656470 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82658380 | 82658470 | 82658380 | ID=MS.gene052936.t1.exon6;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82658380 | 82658470 | 82658380 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82658829 | 82658902 | 82658829 | ID=MS.gene052936.t1.exon7;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82658829 | 82658902 | 82658829 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| chr4.1 | exon | 82659020 | 82659199 | 82659020 | ID=MS.gene052936.t1.exon8;Parent=MS.gene052936.t1 |
| chr4.1 | CDS | 82659020 | 82659199 | 82659020 | ID=cds.MS.gene052936.t1;Parent=MS.gene052936.t1 |
| Gene Sequence |
| Protein sequence |
