Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37678.t1 | XP_013469722.1 | 85.9 | 262 | 10 | 2 | 1 | 235 | 1 | 262 | 1.70E-95 | 359 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37678.t1 | A0A072W0C2 | 85.9 | 262 | 10 | 2 | 1 | 235 | 1 | 262 | 1.2e-95 | 359.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene37678 | -0.851901 | 6.56E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene37678 | -0.87316 | 1.82E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene37678 | -0.84155 | 4.44E-58 | -1.69E-46 |
| MS.gene049232 | MS.gene37678 | -0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene37678 | 0.833939 | 4.00E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene37678 | -0.857657 | 1.41E-62 | -1.69E-46 |
| MS.gene049312 | MS.gene37678 | 0.818433 | 1.97E-52 | -1.69E-46 |
| MS.gene049313 | MS.gene37678 | 0.828661 | 7.94E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene37678 | -0.8705 | 1.39E-66 | -1.69E-46 |
| MS.gene049483 | MS.gene37678 | 0.856118 | 3.99E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene37678 | -0.828268 | 9.88E-55 | -1.69E-46 |
| MS.gene049627 | MS.gene37678 | -0.839231 | 1.79E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene37678 | -0.83836 | 3.01E-57 | -1.69E-46 |
| MS.gene050129 | MS.gene37678 | 0.857721 | 1.35E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene37678 | -0.853875 | 1.79E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene37678 | -0.843238 | 1.58E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene37678 | -0.816342 | 5.81E-52 | -1.69E-46 |
| MS.gene050353 | MS.gene37678 | 0.828803 | 7.34E-55 | -1.69E-46 |
| MS.gene050354 | MS.gene37678 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene050363 | MS.gene37678 | 0.83257 | 8.77E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene37678 | 0.864224 | 1.42E-64 | -1.69E-46 |
| MS.gene050496 | MS.gene37678 | -0.809259 | 2.07E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene37678 | -0.876991 | 8.99E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene37678 | -0.827811 | 1.27E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene37678 | -0.83594 | 1.25E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene37678 | -0.851903 | 6.55E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene37678 | -0.837476 | 5.08E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene37678 | -0.860206 | 2.43E-63 | -1.69E-46 |
| MS.gene050747 | MS.gene37678 | -0.805677 | 1.19E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene37678 | -0.835581 | 1.54E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene37678 | -0.826934 | 2.07E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene37678 | -0.826946 | 2.05E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene37678 | 0.83844 | 2.87E-57 | -1.69E-46 |
| MS.gene050986 | MS.gene37678 | -0.86171 | 8.47E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene37678 | -0.832071 | 1.17E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene37678 | 0.846489 | 2.10E-59 | -1.69E-46 |
| MS.gene05141 | MS.gene37678 | 0.843049 | 1.78E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene37678 | -0.830683 | 2.56E-55 | -1.69E-46 |
| MS.gene051564 | MS.gene37678 | -0.840474 | 8.51E-58 | -1.69E-46 |
| MS.gene051566 | MS.gene37678 | -0.820461 | 6.78E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene37678 | -0.827996 | 1.15E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene37678 | -0.83233 | 1.01E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene37678 | -0.826942 | 2.06E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene37678 | 0.853256 | 2.69E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene37678 | -0.866848 | 2.11E-65 | -1.69E-46 |
| MS.gene052482 | MS.gene37678 | -0.836149 | 1.11E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene37678 | -0.843421 | 1.42E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene37678 | -0.825984 | 3.48E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene37678 | -0.818674 | 1.73E-52 | -1.69E-46 |
| MS.gene052670 | MS.gene37678 | -0.809443 | 1.89E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene37678 | -0.825993 | 3.46E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene37678 | -0.819536 | 1.10E-52 | -1.69E-46 |
| MS.gene052936 | MS.gene37678 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene37678 | -0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene37678 | -0.841169 | 5.59E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene37678 | -0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene37678 | -0.851306 | 9.67E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene37678 | -0.850481 | 1.65E-60 | -1.69E-46 |
| MS.gene053420 | MS.gene37678 | 0.85613 | 3.96E-62 | -1.69E-46 |
| MS.gene053436 | MS.gene37678 | -0.815547 | 8.74E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene37678 | -0.801494 | 8.77E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene37678 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene053549 | MS.gene37678 | 0.861903 | 7.40E-64 | -1.69E-46 |
| MS.gene053561 | MS.gene37678 | 0.832316 | 1.01E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene37678 | -0.829063 | 6.35E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene37678 | -0.836104 | 1.14E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene37678 | -0.810012 | 1.42E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene37678 | -0.805398 | 1.36E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene37678 | -0.829218 | 5.82E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene37678 | -0.83529 | 1.83E-56 | -1.69E-46 |
| MS.gene054616 | MS.gene37678 | 0.848509 | 5.86E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene37678 | -0.849758 | 2.63E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene37678 | 0.813283 | 2.77E-51 | -1.69E-46 |
| MS.gene054708 | MS.gene37678 | 0.824896 | 6.29E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene37678 | -0.836195 | 1.08E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene37678 | -0.833735 | 4.50E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene37678 | -0.860824 | 1.58E-63 | -1.69E-46 |
| MS.gene054959 | MS.gene37678 | 0.827153 | 1.83E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene37678 | 0.854336 | 1.32E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene37678 | -0.88079 | 4.11E-70 | -1.69E-46 |
| MS.gene055502 | MS.gene37678 | -0.86299 | 3.42E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene37678 | -0.854356 | 1.30E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene37678 | -0.820582 | 6.36E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene37678 | -0.823149 | 1.62E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene37678 | -0.828492 | 8.72E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene37678 | -0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene37678 | 0.80641 | 8.34E-50 | -1.69E-46 |
| MS.gene056311 | MS.gene37678 | 0.834019 | 3.82E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene37678 | -0.832604 | 8.60E-56 | -1.69E-46 |
| MS.gene056408 | MS.gene37678 | 0.841364 | 4.97E-58 | -1.69E-46 |
| MS.gene056409 | MS.gene37678 | -0.815181 | 1.05E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene37678 | -0.848879 | 4.63E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene37678 | -0.82529 | 5.08E-54 | -1.69E-46 |
| MS.gene056550 | MS.gene37678 | 0.858407 | 8.41E-63 | -1.69E-46 |
| MS.gene056610 | MS.gene37678 | -0.807881 | 4.07E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene37678 | -0.861156 | 1.25E-63 | -1.69E-46 |
| MS.gene056692 | MS.gene37678 | -0.834956 | 2.22E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene37678 | -0.805176 | 1.52E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene37678 | 0.848761 | 4.99E-60 | -1.69E-46 |
| MS.gene057048 | MS.gene37678 | -0.800601 | 1.33E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene37678 | -0.818893 | 1.55E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene37678 | -0.821444 | 4.03E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene37678 | -0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene37678 | -0.808174 | 3.53E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene37678 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene37678 | -0.810372 | 1.19E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene37678 | -0.833791 | 4.35E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene37678 | -0.863387 | 2.58E-64 | -1.69E-46 |
| MS.gene058493 | MS.gene37678 | 0.810616 | 1.05E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene37678 | -0.842429 | 2.60E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene37678 | -0.800812 | 1.21E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene37678 | -0.847573 | 1.06E-59 | -1.69E-46 |
| MS.gene05883 | MS.gene37678 | -0.806204 | 9.21E-50 | -1.69E-46 |
| MS.gene058978 | MS.gene37678 | 0.823399 | 1.41E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene37678 | -0.893569 | 5.56E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene37678 | -0.843074 | 1.75E-58 | -1.69E-46 |
| MS.gene059034 | MS.gene37678 | -0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene059052 | MS.gene37678 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene37678 | 0.808483 | 3.03E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene37678 | -0.816911 | 4.33E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene37678 | -0.868397 | 6.73E-66 | -1.69E-46 |
| MS.gene059718 | MS.gene37678 | -0.867358 | 1.45E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene37678 | -0.812103 | 5.02E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene37678 | -0.813301 | 2.74E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene37678 | -0.845751 | 3.34E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene37678 | -0.830027 | 3.70E-55 | -1.69E-46 |
| MS.gene059916 | MS.gene37678 | 0.815751 | 7.87E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene37678 | -0.838533 | 2.72E-57 | -1.69E-46 |
| MS.gene060595 | MS.gene37678 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene060602 | MS.gene37678 | 0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene37678 | -0.869227 | 3.63E-66 | -1.69E-46 |
| MS.gene060762 | MS.gene37678 | -0.840643 | 7.69E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene37678 | -0.832572 | 8.76E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene37678 | -0.881597 | 2.10E-70 | -1.69E-46 |
| MS.gene06092 | MS.gene37678 | -0.822696 | 2.06E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene37678 | -0.825165 | 5.44E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene37678 | -0.83014 | 3.47E-55 | -1.69E-46 |
| MS.gene061226 | MS.gene37678 | 0.81399 | 1.93E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37678.t1 | MTR_1g102510 | 86.260 | 262 | 9 | 2 | 1 | 235 | 1 | 262 | 1.92e-153 | 427 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37678.t1 | AT5G51680 | 29.080 | 337 | 131 | 11 | 4 | 235 | 10 | 343 | 5.35e-15 | 73.6 |
Find 52 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTTCAATTCCTTTCATT+TGG | 0.224391 | 1.1:-73575726 | MS.gene37678:CDS |
| AAGAAAGGAAGAAACATATT+AGG | 0.233439 | 1.1:-73575753 | MS.gene37678:CDS |
| TTGCCTCAATTCCCTTTGTT+TGG | 0.279099 | 1.1:-73575618 | MS.gene37678:CDS |
| TGAAAAGTTAAGTTCAAGTT+TGG | 0.340393 | 1.1:-73575260 | MS.gene37678:CDS |
| ACCTTCAATTCCTTTCATTT+GGG | 0.345813 | 1.1:-73575725 | MS.gene37678:CDS |
| TATCAAAACTAAATGATTCT+AGG | 0.360427 | 1.1:+73575524 | None:intergenic |
| ACCACGAGAAAGCAAGCTTT+TGG | 0.370273 | 1.1:-73574791 | MS.gene37678:CDS |
| TGCCTCAATTCCCTTTGTTT+GGG | 0.372035 | 1.1:-73575617 | MS.gene37678:CDS |
| AAGCAACTCAAATGAACAAA+TGG | 0.378323 | 1.1:-73575123 | MS.gene37678:CDS |
| TTCAAGTTTGGTGGAACTAA+AGG | 0.388380 | 1.1:-73575248 | MS.gene37678:CDS |
| AACTGAGTTAAATGATTCAT+TGG | 0.396407 | 1.1:+73575501 | None:intergenic |
| AGTATAAGCAGCTATGAAAC+TGG | 0.406907 | 1.1:-73575376 | MS.gene37678:CDS |
| AAACTAGGGAGGGGTATTCC+AGG | 0.409764 | 1.1:+73575586 | None:intergenic |
| TTCTAGGTCCAAGCTAGTTA+TGG | 0.418005 | 1.1:+73575540 | None:intergenic |
| AGAAAGGAAGAAACATATTA+GGG | 0.423493 | 1.1:-73575752 | MS.gene37678:CDS |
| ATGGAACAAGTTACCTTTGG+TGG | 0.430078 | 1.1:+73575097 | None:intergenic |
| TCAAGTTTGGTGGAACTAAA+GGG | 0.439502 | 1.1:-73575247 | MS.gene37678:CDS |
| CAGGCATTCCTATAAAAGAT+TGG | 0.447195 | 1.1:-73575693 | MS.gene37678:CDS |
| AAAGTTAAGTTCAAGTTTGG+TGG | 0.448826 | 1.1:-73575257 | MS.gene37678:CDS |
| CTCTCCAGCTTCGTCGGAGA+TGG | 0.451790 | 1.1:-73575404 | MS.gene37678:CDS |
| TTCCCAAACAAAGGGAATTG+AGG | 0.478406 | 1.1:+73575615 | None:intergenic |
| CTTTAGACTAGTTTCAGCCT+AGG | 0.480571 | 1.1:+73574707 | None:intergenic |
| AGAGAGTTTGCAAGTAAAGA+AGG | 0.480592 | 1.1:+73575478 | None:intergenic |
| CTATCCATCTCCGACGAAGC+TGG | 0.483008 | 1.1:+73575400 | None:intergenic |
| TTTAGACTAGTTTCAGCCTA+GGG | 0.498911 | 1.1:+73574708 | None:intergenic |
| TCCCAAATGAAAGGAATTGA+AGG | 0.504204 | 1.1:+73575724 | None:intergenic |
| AGCAACTCAAATGAACAAAT+GGG | 0.509084 | 1.1:-73575122 | MS.gene37678:CDS |
| TCATCAACATGTGAGAAACT+AGG | 0.514045 | 1.1:+73575571 | None:intergenic |
| ACAAGCAGCAGTATCATTGA+AGG | 0.522761 | 1.1:-73574752 | MS.gene37678:CDS |
| TCCGACGAAGCTGGAGAGGA+TGG | 0.522845 | 1.1:+73575409 | None:intergenic |
| ATAATTAACTCTCCAAGTGT+TGG | 0.527351 | 1.1:+73575175 | None:intergenic |
| GAGGATGGAGTTTGCTGTAG+TGG | 0.531543 | 1.1:+73575424 | None:intergenic |
| TCCATCCTCTCCAGCTTCGT+CGG | 0.537624 | 1.1:-73575410 | MS.gene37678:CDS |
| TTCATTTGGGAAACAAAACC+AGG | 0.538522 | 1.1:-73575712 | MS.gene37678:CDS |
| TCAAGGAAGCAACCAACACT+TGG | 0.542435 | 1.1:-73575187 | MS.gene37678:CDS |
| TTGCTTCCTTGACATATCAC+AGG | 0.543111 | 1.1:+73575198 | None:intergenic |
| TCCAAAAGCTTGCTTTCTCG+TGG | 0.546204 | 1.1:+73574790 | None:intergenic |
| CATCAACATGTGAGAAACTA+GGG | 0.549198 | 1.1:+73575572 | None:intergenic |
| ATTATACCTGTGATATGTCA+AGG | 0.573360 | 1.1:-73575204 | MS.gene37678:CDS |
| GAGTGAAACCATAACTAGCT+TGG | 0.574998 | 1.1:-73575548 | MS.gene37678:CDS |
| TGACAAAATGATGAGTCCAC+TGG | 0.586915 | 1.1:+73575667 | None:intergenic |
| TGAAGAGAAAGTACTACCCT+AGG | 0.596271 | 1.1:-73574724 | MS.gene37678:CDS |
| CATCTCCGACGAAGCTGGAG+AGG | 0.596381 | 1.1:+73575405 | None:intergenic |
| TGGAGTTTGCTGTAGTGGCA+TGG | 0.598354 | 1.1:+73575429 | None:intergenic |
| CAAATGAAAGGAATTGAAGG+TGG | 0.607064 | 1.1:+73575727 | None:intergenic |
| GAACAAATGGGATCCACCAA+AGG | 0.609336 | 1.1:-73575110 | MS.gene37678:intron |
| ACATGTGAGAAACTAGGGAG+GGG | 0.616121 | 1.1:+73575577 | None:intergenic |
| TAAGCAGCTATGAAACTGGA+AGG | 0.618972 | 1.1:-73575372 | MS.gene37678:intron |
| TATAAAAGATTGGAAGCCAG+TGG | 0.619766 | 1.1:-73575683 | MS.gene37678:CDS |
| AACATGTGAGAAACTAGGGA+GGG | 0.639709 | 1.1:+73575576 | None:intergenic |
| CAAGCAGCAGTATCATTGAA+GGG | 0.643098 | 1.1:-73574751 | MS.gene37678:CDS |
| CAACATGTGAGAAACTAGGG+AGG | 0.699559 | 1.1:+73575575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACGTTTATTGACATAAAAA+TGG | + | chr1.1:73575397-73575416 | None:intergenic | 20.0% |
| !! | ATTCAAATTAGCATCTAAAT+TGG | - | chr1.1:73575556-73575575 | MS.gene37678:CDS | 20.0% |
| !! | TATCAAAACTAAATGATTCT+AGG | + | chr1.1:73574951-73574970 | None:intergenic | 20.0% |
| !!! | AATTGGTTACTTTTTAAGTA+TGG | - | chr1.1:73575573-73575592 | MS.gene37678:CDS | 20.0% |
| ! | AACTGAGTTAAATGATTCAT+TGG | + | chr1.1:73574974-73574993 | None:intergenic | 25.0% |
| ! | AAGAAAGGAAGAAACATATT+AGG | - | chr1.1:73574719-73574738 | MS.gene37678:CDS | 25.0% |
| ! | AGAAAGGAAGAAACATATTA+GGG | - | chr1.1:73574720-73574739 | MS.gene37678:CDS | 25.0% |
| ! | ATAATCTCATCGAGAAAAAT+TGG | + | chr1.1:73575538-73575557 | None:intergenic | 25.0% |
| ! | CTAAAACGTTGAATTAAGAT+CGG | - | chr1.1:73575455-73575474 | MS.gene37678:CDS | 25.0% |
| ! | TATGTCAATAAACGTTTCTT+TGG | - | chr1.1:73575401-73575420 | MS.gene37678:CDS | 25.0% |
| !! | TGAAAAGTTAAGTTCAAGTT+TGG | - | chr1.1:73575212-73575231 | MS.gene37678:CDS | 25.0% |
| !!! | ATTTGTTTTAGTGGAGTTTT+TGG | + | chr1.1:73574835-73574854 | None:intergenic | 25.0% |
| AAAATGGAACAAGTTACCTT+TGG | + | chr1.1:73575381-73575400 | None:intergenic | 30.0% | |
| AAGCAACTCAAATGAACAAA+TGG | - | chr1.1:73575349-73575368 | MS.gene37678:intron | 30.0% | |
| ACCTTCAATTCCTTTCATTT+GGG | - | chr1.1:73574747-73574766 | MS.gene37678:CDS | 30.0% | |
| AGCAACTCAAATGAACAAAT+GGG | - | chr1.1:73575350-73575369 | MS.gene37678:intron | 30.0% | |
| ATAATTAACTCTCCAAGTGT+TGG | + | chr1.1:73575300-73575319 | None:intergenic | 30.0% | |
| ATTATACCTGTGATATGTCA+AGG | - | chr1.1:73575268-73575287 | MS.gene37678:CDS | 30.0% | |
| TGAAGCAAAAGAGTAAATGT+TGG | + | chr1.1:73575650-73575669 | None:intergenic | 30.0% | |
| ! | AAAGTTAAGTTCAAGTTTGG+TGG | - | chr1.1:73575215-73575234 | MS.gene37678:CDS | 30.0% |
| ! | GACTTTGTATTTGGAATACT+TGG | + | chr1.1:73575505-73575524 | None:intergenic | 30.0% |
| !!! | AAAGTCTGGTTTTCTTGAAA+GGG | - | chr1.1:73575176-73575195 | MS.gene37678:CDS | 30.0% |
| !!! | ATTGAGGCAATTTGTTTTAG+TGG | + | chr1.1:73574844-73574863 | None:intergenic | 30.0% |
| !!! | TTTAACTGGTTCTGCTTTTT+TGG | - | chr1.1:73575128-73575147 | MS.gene37678:CDS | 30.0% |
| AGAGAGTTTGCAAGTAAAGA+AGG | + | chr1.1:73574997-73575016 | None:intergenic | 35.0% | |
| AGTATAAGCAGCTATGAAAC+TGG | - | chr1.1:73575096-73575115 | MS.gene37678:intron | 35.0% | |
| CAAATGAAAGGAATTGAAGG+TGG | + | chr1.1:73574748-73574767 | None:intergenic | 35.0% | |
| CACCTTCAATTCCTTTCATT+TGG | - | chr1.1:73574746-73574765 | MS.gene37678:CDS | 35.0% | |
| CAGGCATTCCTATAAAAGAT+TGG | - | chr1.1:73574779-73574798 | MS.gene37678:CDS | 35.0% | |
| CATCAACATGTGAGAAACTA+GGG | + | chr1.1:73574903-73574922 | None:intergenic | 35.0% | |
| CTTTCAAGAAAACCAGACTT+TGG | + | chr1.1:73575177-73575196 | None:intergenic | 35.0% | |
| TATAAAAGATTGGAAGCCAG+TGG | - | chr1.1:73574789-73574808 | MS.gene37678:CDS | 35.0% | |
| TCATCAACATGTGAGAAACT+AGG | + | chr1.1:73574904-73574923 | None:intergenic | 35.0% | |
| TCCCAAATGAAAGGAATTGA+AGG | + | chr1.1:73574751-73574770 | None:intergenic | 35.0% | |
| TCGTAGTCTGACTTTGTATT+TGG | + | chr1.1:73575514-73575533 | None:intergenic | 35.0% | |
| TTCATTTGGGAAACAAAACC+AGG | - | chr1.1:73574760-73574779 | MS.gene37678:CDS | 35.0% | |
| TTTGTTTGGGAAGAAAAACC+TGG | - | chr1.1:73574868-73574887 | MS.gene37678:intron | 35.0% | |
| ! | AGGTTTTTCTTCCCAAACAA+AGG | + | chr1.1:73574869-73574888 | None:intergenic | 35.0% |
| ! | CAATCTTTTATAGGAATGCC+TGG | + | chr1.1:73574781-73574800 | None:intergenic | 35.0% |
| ! | GGTTTTCTTGAAAGGGATAT+TGG | - | chr1.1:73575183-73575202 | MS.gene37678:CDS | 35.0% |
| ! | GGTTTTTCTTCCCAAACAAA+GGG | + | chr1.1:73574868-73574887 | None:intergenic | 35.0% |
| ! | TCAAGTTTGGTGGAACTAAA+GGG | - | chr1.1:73575225-73575244 | MS.gene37678:CDS | 35.0% |
| ! | TTCAAGTTTGGTGGAACTAA+AGG | - | chr1.1:73575224-73575243 | MS.gene37678:CDS | 35.0% |
| !! | ACTGGCTTCCAATCTTTTAT+AGG | + | chr1.1:73574790-73574809 | None:intergenic | 35.0% |
| !!! | CAAAGTCTGGTTTTCTTGAA+AGG | - | chr1.1:73575175-73575194 | MS.gene37678:CDS | 35.0% |
| !!! | GGTTTTGTTTCCCAAATGAA+AGG | + | chr1.1:73574760-73574779 | None:intergenic | 35.0% |
| AACATGTGAGAAACTAGGGA+GGG | + | chr1.1:73574899-73574918 | None:intergenic | 40.0% | |
| ACAAGCAGCAGTATCATTGA+AGG | - | chr1.1:73575720-73575739 | MS.gene37678:CDS | 40.0% | |
| ACTGGAAGGTCAAGTTTAAC+TGG | - | chr1.1:73575114-73575133 | MS.gene37678:CDS | 40.0% | |
| ATGGAACAAGTTACCTTTGG+TGG | + | chr1.1:73575378-73575397 | None:intergenic | 40.0% | |
| CAAGCAGCAGTATCATTGAA+GGG | - | chr1.1:73575721-73575740 | MS.gene37678:CDS | 40.0% | |
| GAGTGAAACCATAACTAGCT+TGG | - | chr1.1:73574924-73574943 | MS.gene37678:intron | 40.0% | |
| TAAGCAGCTATGAAACTGGA+AGG | - | chr1.1:73575100-73575119 | MS.gene37678:intron | 40.0% | |
| TCAAGAAAACCAGACTTTGG+TGG | + | chr1.1:73575174-73575193 | None:intergenic | 40.0% | |
| TGACAAAATGATGAGTCCAC+TGG | + | chr1.1:73574808-73574827 | None:intergenic | 40.0% | |
| TTCCCAAACAAAGGGAATTG+AGG | + | chr1.1:73574860-73574879 | None:intergenic | 40.0% | |
| TTCTAGGTCCAAGCTAGTTA+TGG | + | chr1.1:73574935-73574954 | None:intergenic | 40.0% | |
| TTGCCTCAATTCCCTTTGTT+TGG | - | chr1.1:73574854-73574873 | MS.gene37678:intron | 40.0% | |
| TTGCTTCCTTGACATATCAC+AGG | + | chr1.1:73575277-73575296 | None:intergenic | 40.0% | |
| ! | TGCCTCAATTCCCTTTGTTT+GGG | - | chr1.1:73574855-73574874 | MS.gene37678:intron | 40.0% |
| !! | TGAAGAGAAAGTACTACCCT+AGG | - | chr1.1:73575748-73575767 | MS.gene37678:CDS | 40.0% |
| ACATGTGAGAAACTAGGGAG+GGG | + | chr1.1:73574898-73574917 | None:intergenic | 45.0% | |
| CAACATGTGAGAAACTAGGG+AGG | + | chr1.1:73574900-73574919 | None:intergenic | 45.0% | |
| CCAGACTTTGGTGGAAACAA+AGG | + | chr1.1:73575165-73575184 | None:intergenic | 45.0% | |
| GAACAAATGGGATCCACCAA+AGG | - | chr1.1:73575362-73575381 | MS.gene37678:intron | 45.0% | |
| TCAAGGAAGCAACCAACACT+TGG | - | chr1.1:73575285-73575304 | MS.gene37678:intron | 45.0% | |
| ! | ACCACGAGAAAGCAAGCTTT+TGG | - | chr1.1:73575681-73575700 | MS.gene37678:CDS | 45.0% |
| ! | CCTTTGTTTCCACCAAAGTC+TGG | - | chr1.1:73575162-73575181 | MS.gene37678:CDS | 45.0% |
| ! | TCCAAAAGCTTGCTTTCTCG+TGG | + | chr1.1:73575685-73575704 | None:intergenic | 45.0% |
| !! | AAACTAGGGAGGGGTATTCC+AGG | + | chr1.1:73574889-73574908 | None:intergenic | 50.0% |
| !! | GAGGATGGAGTTTGCTGTAG+TGG | + | chr1.1:73575051-73575070 | None:intergenic | 50.0% |
| !! | TGGAGTTTGCTGTAGTGGCA+TGG | + | chr1.1:73575046-73575065 | None:intergenic | 50.0% |
| CTATCCATCTCCGACGAAGC+TGG | + | chr1.1:73575075-73575094 | None:intergenic | 55.0% | |
| TCCATCCTCTCCAGCTTCGT+CGG | - | chr1.1:73575062-73575081 | MS.gene37678:intron | 55.0% | |
| CATCTCCGACGAAGCTGGAG+AGG | + | chr1.1:73575070-73575089 | None:intergenic | 60.0% | |
| CTCTCCAGCTTCGTCGGAGA+TGG | - | chr1.1:73575068-73575087 | MS.gene37678:intron | 60.0% | |
| TCCGACGAAGCTGGAGAGGA+TGG | + | chr1.1:73575066-73575085 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 73574709 | 73575785 | 73574709 | ID=MS.gene37678 |
| chr1.1 | mRNA | 73574709 | 73575785 | 73574709 | ID=MS.gene37678.t1;Parent=MS.gene37678 |
| chr1.1 | exon | 73575373 | 73575785 | 73575373 | ID=MS.gene37678.t1.exon1;Parent=MS.gene37678.t1 |
| chr1.1 | CDS | 73575373 | 73575785 | 73575373 | ID=cds.MS.gene37678.t1;Parent=MS.gene37678.t1 |
| chr1.1 | exon | 73575111 | 73575297 | 73575111 | ID=MS.gene37678.t1.exon2;Parent=MS.gene37678.t1 |
| chr1.1 | CDS | 73575111 | 73575297 | 73575111 | ID=cds.MS.gene37678.t1;Parent=MS.gene37678.t1 |
| chr1.1 | exon | 73574709 | 73574816 | 73574709 | ID=MS.gene37678.t1.exon3;Parent=MS.gene37678.t1 |
| chr1.1 | CDS | 73574709 | 73574816 | 73574709 | ID=cds.MS.gene37678.t1;Parent=MS.gene37678.t1 |
| Gene Sequence |
| Protein sequence |
