AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79879


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79879.t1 MTR_3g084030 95.161 620 30 0 1 620 731 1350 0.0 1199
MS.gene79879.t1 MTR_3g084030 95.161 620 30 0 1 620 759 1378 0.0 1197
MS.gene79879.t1 MTR_3g084030 95.161 620 30 0 1 620 341 960 0.0 1197
MS.gene79879.t1 MTR_3g084030 95.161 620 30 0 1 620 711 1330 0.0 1196
MS.gene79879.t1 MTR_4g112530 29.012 162 102 3 318 467 189 349 1.51e-16 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79879.t1 AT3G59780 47.737 685 285 10 3 620 1 679 0.0 589
MS.gene79879.t1 AT5G23060 29.268 164 104 3 315 467 186 348 2.02e-16 82.0

Find 160 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACAACAAATGGAATAAT+TGG 0.124067 3.1:-65586998 None:intergenic
GCAAGATCCTTGAAGAAAAT+TGG 0.124434 3.1:+65588412 MS.gene79879:CDS
TCTTATGTTGTTTACCTATA+TGG 0.129454 3.1:+65586525 MS.gene79879:CDS
TTGCAGTTAATTGGTGTATT+TGG 0.139173 3.1:+65590904 MS.gene79879:CDS
TTATTGCAGATTCCCTTATT+TGG 0.160916 3.1:+65585817 MS.gene79879:intron
AAGAGCTCGAAAGCTGATTT+AGG 0.196673 3.1:-65587199 None:intergenic
ATTTATTGGTTGTGGAAATA+TGG 0.214272 3.1:+65587154 MS.gene79879:CDS
TTCATGGGCTGCTGGAAAAT+TGG 0.221878 3.1:+65591828 MS.gene79879:CDS
TATTGCAGATTCCCTTATTT+GGG 0.233245 3.1:+65585818 MS.gene79879:intron
TTGCTTGCTCCTGTTAAAAT+TGG 0.250970 3.1:+65591793 MS.gene79879:CDS
ATTCAGCGACTCAATTAATA+AGG 0.262660 3.1:+65586245 MS.gene79879:CDS
CAAGATCCTTGAAGAAAATT+GGG 0.268186 3.1:+65588413 MS.gene79879:CDS
CGAGCAGCCCGTCGAATATC+AGG 0.273371 3.1:-65587545 None:intergenic
ATATATGCAGGACTATTTAT+TGG 0.278657 3.1:+65587140 MS.gene79879:intron
GTACATTTAGGTTTGCATTA+TGG 0.282522 3.1:+65585904 MS.gene79879:CDS
TGGGCTCTTCAGCAACATTA+TGG 0.285430 3.1:+65587023 MS.gene79879:CDS
GTTTGAATCTGTGTCGAATT+TGG 0.286265 3.1:+65586149 MS.gene79879:CDS
AGTATGGTAAGTGCTGTTTC+AGG 0.288654 3.1:-65589477 None:intergenic
AATGGAATAATTGGGTCATT+TGG 0.302271 3.1:-65586989 None:intergenic
TTGAGAGAAACTGTGGATTC+AGG 0.303521 3.1:-65591973 None:intergenic
GTAGAAGAAAATGTACATTT+AGG 0.304101 3.1:+65585892 MS.gene79879:CDS
CTTATGTTGTTTACCTATAT+GGG 0.308604 3.1:+65586526 MS.gene79879:CDS
CTCTCAAAATCCTTTCGAAT+TGG 0.315169 3.1:-65585859 None:intergenic
GTACTTGATAATATTGCTTC+TGG 0.319128 3.1:-65586108 None:intergenic
TTTATTCAGGCACTACTTGC+GGG 0.319207 3.1:+65590457 MS.gene79879:intron
GACAAATACCTCATTGAGTA+TGG 0.320757 3.1:-65589493 None:intergenic
GAGAAAACATTGCAGTTAAT+TGG 0.326196 3.1:+65590895 MS.gene79879:CDS
TCATGTCCATTTCAGGTTGA+TGG 0.338072 3.1:+65587749 MS.gene79879:intron
TCAAAATTTGAAAATTGTTA+AGG 0.341384 3.1:+65587835 MS.gene79879:CDS
CACAAGTCTTGAGGCCTGTT+GGG 0.341786 3.1:+65586613 MS.gene79879:CDS
AACCAAACCAGGCGCTTTGC+TGG 0.356592 3.1:-65586445 None:intergenic
AGTTTCTTCCTGCAGAGATC+AGG 0.362129 3.1:+65586559 MS.gene79879:CDS
ACCTACATCACCTTCATCAT+TGG 0.364861 3.1:+65591870 MS.gene79879:CDS
CTATAAACACTGTCTCAGTT+TGG 0.369239 3.1:+65585962 MS.gene79879:CDS
TCGAAGGTGGCTTTCAGTCT+TGG 0.374402 3.1:+65589421 MS.gene79879:CDS
CCCTTCACTATCAGATGGTT+GGG 0.374610 3.1:-65591935 None:intergenic
CGAAGAAACCCGCAGATATA+TGG 0.375217 3.1:-65591141 None:intergenic
CGAAGGTGGCTTTCAGTCTT+GGG 0.377276 3.1:+65589422 MS.gene79879:CDS
CTTGAAGAAAATTGGGGTTA+AGG 0.382733 3.1:+65588420 MS.gene79879:CDS
CACGGTGTGGCTGAGCAAAA+AGG 0.388923 3.1:-65585689 None:intergenic
TGGATTCAGGAGTCGGGTCT+TGG 0.390495 3.1:-65591960 None:intergenic
AGAGCTCGAAAGCTGATTTA+GGG 0.394915 3.1:-65587198 None:intergenic
GTGTTATTCCCCTTCTTCTC+AGG 0.396060 3.1:+65585709 MS.gene79879:CDS
ACTCCTTCGCCGACCCATAT+AGG 0.401523 3.1:-65586539 None:intergenic
TAAATCAGCTTTCGAGCTCT+TGG 0.410783 3.1:+65587201 MS.gene79879:CDS
TATAAACACTGTCTCAGTTT+GGG 0.411173 3.1:+65585963 MS.gene79879:CDS
CTGATATTCGACGGGCTGCT+CGG 0.413374 3.1:+65587546 MS.gene79879:CDS
GCAGGACTATTTATTGGTTG+TGG 0.413567 3.1:+65587146 MS.gene79879:intron
ATTGCTTCTGGTTGCACAGC+AGG 0.416027 3.1:-65586096 None:intergenic
AGATGGTTGGGATTCATGTT+TGG 0.419013 3.1:-65591923 None:intergenic
TCCTGTTAAAATTGGAGGTC+AGG 0.420799 3.1:+65591801 MS.gene79879:CDS
CACCAGCAAAGCGCCTGGTT+TGG 0.428090 3.1:+65586443 MS.gene79879:CDS
TTGAATAATAGCAGCGATCA+AGG 0.430376 3.1:-65587816 None:intergenic
TCTTCGAAGCTCAGTGGATT+CGG 0.434977 3.1:+65586278 MS.gene79879:CDS
CATCATTGGATGTTCAGAAC+CGG 0.437481 3.1:+65591884 MS.gene79879:CDS
CTTGCTCCTGTTAAAATTGG+AGG 0.438553 3.1:+65591796 MS.gene79879:CDS
TGCAAAGTCTACTAATTCCT+CGG 0.439234 3.1:-65586037 None:intergenic
TGTTGGGTCTGCAACTCAAC+AGG 0.442102 3.1:+65586629 MS.gene79879:CDS
TAGAAATAGACCTGAGAAGA+AGG 0.445857 3.1:-65585719 None:intergenic
TCCCTTCACTATCAGATGGT+TGG 0.446609 3.1:-65591936 None:intergenic
TGGTGTATTTGGCCTCAGTC+TGG 0.451543 3.1:+65590915 MS.gene79879:CDS
ATACATGGCTTTCTATTCAC+TGG 0.451915 3.1:+65586946 MS.gene79879:CDS
CAGCTTTCGAGCTCTTGGCC+GGG 0.453792 3.1:+65587206 MS.gene79879:CDS
AAACAACAAATGGAATAATT+GGG 0.465553 3.1:-65586997 None:intergenic
CTCCATACGCAAGTTGTTGA+AGG 0.467030 3.1:+65587772 MS.gene79879:CDS
TCAGCTTTCGAGCTCTTGGC+CGG 0.474473 3.1:+65587205 MS.gene79879:CDS
TATTCACTGGAGAAGAGTCT+TGG 0.485287 3.1:+65586959 MS.gene79879:CDS
GCTGGAAAATTGGAATCAAA+TGG 0.485788 3.1:+65591838 MS.gene79879:CDS
GCGGGGTCATATGCATTAGT+AGG 0.489225 3.1:+65590475 MS.gene79879:CDS
TCAAGTACTGATACAACGTC+GGG 0.489964 3.1:+65586123 MS.gene79879:CDS
ACTGGAGAAGAGTCTTGGCT+TGG 0.492614 3.1:+65586964 MS.gene79879:CDS
TGTTGAGTTGCAGACCCAAC+AGG 0.492656 3.1:-65586627 None:intergenic
AGTATACTCACCTCACATCT+TGG 0.494705 3.1:-65591187 None:intergenic
GTGGAAATATGGAGGTTACT+CGG 0.498447 3.1:+65587165 MS.gene79879:CDS
AGCTTTCGAGCTCTTGGCCG+GGG 0.502238 3.1:+65587207 MS.gene79879:CDS
TTGAGAGTTCTCTGTCAAGT+GGG 0.503233 3.1:+65586499 MS.gene79879:CDS
TGTTCAGAACCGGGTACTAC+AGG 0.505490 3.1:+65591894 MS.gene79879:CDS
CAGTTCCAAGGTTATTGTGT+TGG 0.508827 3.1:+65588360 MS.gene79879:CDS
GCACAAGTCTTGAGGCCTGT+TGG 0.512417 3.1:+65586612 MS.gene79879:CDS
TGGCTCCCTTCACTATCAGA+TGG 0.512937 3.1:-65591940 None:intergenic
GTCTACTAATTCCTCGGGCG+CGG 0.517151 3.1:-65586031 None:intergenic
AATTGGAATCAAATGGCATA+GGG 0.521233 3.1:+65591845 MS.gene79879:CDS
GAAAATTCACCACTTAGTGC+TGG 0.521945 3.1:+65585985 MS.gene79879:CDS
TGGAAATATGGAGGTTACTC+GGG 0.523308 3.1:+65587166 MS.gene79879:CDS
GCAAAGTCTACTAATTCCTC+GGG 0.524379 3.1:-65586036 None:intergenic
CTGTGTCGAATTTGGTTGAA+GGG 0.525203 3.1:+65586157 MS.gene79879:CDS
ATCTCTATGTCCAATTCGAA+AGG 0.526706 3.1:+65585849 MS.gene79879:CDS
TGCGGGTTTCTTCGTATGAA+AGG 0.528929 3.1:+65591150 MS.gene79879:CDS
ACTGTATCCCTGATCTCTGC+AGG 0.529778 3.1:-65586567 None:intergenic
AGAAATAGACCTGAGAAGAA+GGG 0.536985 3.1:-65585718 None:intergenic
TTCAGCGACTCAATTAATAA+GGG 0.537864 3.1:+65586246 MS.gene79879:CDS
GAAACTGTGGATTCAGGAGT+CGG 0.538062 3.1:-65591967 None:intergenic
TGGCAGCAGCCTGTAGTACC+CGG 0.538230 3.1:-65591903 None:intergenic
GTTTCTTCCTGCAGAGATCA+GGG 0.540695 3.1:+65586560 MS.gene79879:CDS
AAGTACAGCATTTGAGTCCC+CGG 0.541795 3.1:-65587224 None:intergenic
GGAGTCACCAGCAAAGCGCC+TGG 0.543893 3.1:+65586438 MS.gene79879:CDS
AAATTGGAATCAAATGGCAT+AGG 0.545577 3.1:+65591844 MS.gene79879:CDS
GCTGATGGTACTCGTTCTAA+AGG 0.548139 3.1:+65588385 MS.gene79879:CDS
AGGATATTAGACCTTCTCCT+TGG 0.548298 3.1:+65590042 MS.gene79879:CDS
AAACTGTGGATTCAGGAGTC+GGG 0.550317 3.1:-65591966 None:intergenic
CAGGTTTGAGTTCCTTGATG+CGG 0.550896 3.1:-65589458 None:intergenic
AAGCCACCTTCGACCAAGTA+CGG 0.550955 3.1:-65589411 None:intergenic
ACCCTTCAACAACTTGCGTA+TGG 0.551443 3.1:-65587774 None:intergenic
AGCATCCAACACAATAACCT+TGG 0.551628 3.1:-65588365 None:intergenic
TTCTGAACATCCAATGATGA+AGG 0.553934 3.1:-65591880 None:intergenic
CAGCGATCAAGGAGTCATCT+AGG 0.555196 3.1:-65587805 None:intergenic
TAGTTTATCTACCGCGCCCG+AGG 0.557695 3.1:+65586020 MS.gene79879:CDS
GTTGAGAGTTCTCTGTCAAG+TGG 0.557973 3.1:+65586498 MS.gene79879:CDS
TATTGGTTGTGGAAATATGG+AGG 0.560272 3.1:+65587157 MS.gene79879:CDS
CTGAATTCTCCAGCACTAAG+TGG 0.561391 3.1:-65585994 None:intergenic
TCTGTGTCGAATTTGGTTGA+AGG 0.561591 3.1:+65586156 MS.gene79879:CDS
TGTTGTTTACCTATATGGGT+CGG 0.567572 3.1:+65586530 MS.gene79879:CDS
ATTGCAGATTCCCTTATTTG+GGG 0.571949 3.1:+65585819 MS.gene79879:intron
TCACCAGACCATATATCTGC+GGG 0.572007 3.1:+65591133 MS.gene79879:intron
GAAATAGACCTGAGAAGAAG+GGG 0.572693 3.1:-65585717 None:intergenic
AAAACAAAGTCTCCGCATCA+AGG 0.573040 3.1:+65589446 MS.gene79879:CDS
TTGCAGATTCCCTTATTTGG+GGG 0.573110 3.1:+65585820 MS.gene79879:intron
ATCATTGGATGTTCAGAACC+GGG 0.574090 3.1:+65591885 MS.gene79879:CDS
AACACATCAATAACCAAACC+AGG 0.577171 3.1:-65586456 None:intergenic
TGGTATTCCTGATATTCGAC+GGG 0.577648 3.1:+65587538 MS.gene79879:CDS
TGCGAGTGTAACTCCAATTG+AGG 0.580741 3.1:+65587577 MS.gene79879:CDS
TTTCTGCTGCTGATCAAACG+GGG 0.580993 3.1:+65586370 MS.gene79879:CDS
ATGGTATTCCTGATATTCGA+CGG 0.583157 3.1:+65587537 MS.gene79879:CDS
TGATGTGTTGCGCCGTACAG+TGG 0.587383 3.1:+65586470 MS.gene79879:CDS
TTATTCAGGCACTACTTGCG+GGG 0.589569 3.1:+65590458 MS.gene79879:intron
TCCAATGATGAAGGTGATGT+AGG 0.591142 3.1:-65591871 None:intergenic
TGAGAGTTCTCTGTCAAGTG+GGG 0.591459 3.1:+65586500 MS.gene79879:CDS
TTTGCAAAACAATCAACTGA+AGG 0.592793 3.1:+65586054 MS.gene79879:CDS
AAGATCCTTGAAGAAAATTG+GGG 0.595285 3.1:+65588414 MS.gene79879:CDS
CAGAATCCGTACTTGGTCGA+AGG 0.599028 3.1:+65589405 MS.gene79879:intron
TCCCAACCATCTGATAGTGA+AGG 0.599318 3.1:+65591934 MS.gene79879:CDS
TGTAAATGAAGTTCTGAGTG+AGG 0.600722 3.1:-65585932 None:intergenic
TTACCTATATGGGTCGGCGA+AGG 0.607955 3.1:+65586536 MS.gene79879:CDS
GTTATTGTGTTGGATGCTGA+TGG 0.609140 3.1:+65588370 MS.gene79879:CDS
TCCATACGCAAGTTGTTGAA+GGG 0.609166 3.1:+65587773 MS.gene79879:CDS
GAGCTCGAAAGCTGATTTAG+GGG 0.610992 3.1:-65587197 None:intergenic
CCCAACCATCTGATAGTGAA+GGG 0.612867 3.1:+65591935 MS.gene79879:CDS
ATAAAGCAGCACAAGTCTTG+AGG 0.615223 3.1:+65586604 MS.gene79879:CDS
TGTGTCGAATTTGGTTGAAG+GGG 0.615467 3.1:+65586158 MS.gene79879:CDS
TCTCAACTGCAACCACTGTA+CGG 0.618391 3.1:-65586482 None:intergenic
GTCTAATAAGCAGATATACA+TGG 0.622785 3.1:+65586931 MS.gene79879:intron
TTCTGCTGCTGATCAAACGG+GGG 0.626275 3.1:+65586371 MS.gene79879:CDS
GGAAGCTGAAGCAATTCTAG+AGG 0.629183 3.1:+65590022 MS.gene79879:intron
ATCAAGTACTGATACAACGT+CGG 0.629682 3.1:+65586122 MS.gene79879:CDS
AATCCGTACTTGGTCGAAGG+TGG 0.633723 3.1:+65589408 MS.gene79879:CDS
GACCATAACTTGCCTCGGAG+CGG 0.636978 3.1:-65587255 None:intergenic
TTGCAAAACAATCAACTGAA+GGG 0.639721 3.1:+65586055 MS.gene79879:CDS
GTGTCGAATTTGGTTGAAGG+GGG 0.645100 3.1:+65586159 MS.gene79879:CDS
AAATGCTCTTCGAAGCTCAG+TGG 0.649547 3.1:+65586272 MS.gene79879:CDS
ATCACCAGACCATATATCTG+CGG 0.654757 3.1:+65591132 MS.gene79879:intron
AGCACTTACCATACTCAATG+AGG 0.655390 3.1:+65589485 MS.gene79879:CDS
AAGATTTGAACCAAGATGTG+AGG 0.656737 3.1:+65591177 MS.gene79879:CDS
TGGTCTATAGGACAGTTCCA+AGG 0.670949 3.1:+65588348 MS.gene79879:intron
GTAAATGAAGTTCTGAGTGA+GGG 0.673252 3.1:-65585931 None:intergenic
ATACGCAAGTTGTTGAAGGG+TGG 0.682012 3.1:+65587776 MS.gene79879:CDS
AGAAGGGGAATAACACGGTG+TGG 0.683039 3.1:-65585702 None:intergenic
ACTTATAGATGTCCGCTCCG+AGG 0.684831 3.1:+65587243 MS.gene79879:CDS
AAAATATACATACCAGACTG+AGG 0.706311 3.1:-65590927 None:intergenic
TGAGAAGAAGGGGAATAACA+CGG 0.714353 3.1:-65585707 None:intergenic
CAAGTACTGATACAACGTCG+GGG 0.762174 3.1:+65586124 MS.gene79879:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAAATAAAATAGAAAAA+TGG + chr3.1:65590259-65590278 MS.gene79879:intron 10.0%
!! TTAAAAATAAAGAATTGATT+AGG - chr3.1:65589672-65589691 None:intergenic 10.0%
!!! AAACAAAATGAAATTTTTTA+GGG - chr3.1:65586698-65586717 None:intergenic 10.0%
!!! TAAACAAAATGAAATTTTTT+AGG - chr3.1:65586699-65586718 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3.1:65589821-65589840 MS.gene79879:intron 100.0%
!! ATGATGATATTTAAAAATTG+TGG + chr3.1:65587612-65587631 MS.gene79879:intron 15.0%
!! ATTATTAGGTGAAAATAAAA+AGG - chr3.1:65588307-65588326 None:intergenic 15.0%
!! TACTTTGATATTATAACAAT+AGG + chr3.1:65588011-65588030 MS.gene79879:intron 15.0%
!! TCAAAATTTGAAAATTGTTA+AGG + chr3.1:65587835-65587854 MS.gene79879:CDS 15.0%
!! TGAATAAATTCTTAGTTTAT+GGG - chr3.1:65590517-65590536 None:intergenic 15.0%
!! TTAATAATAGAGAAAAATTC+TGG + chr3.1:65588778-65588797 MS.gene79879:intron 15.0%
!!! ATTTTATGTTTATTTTTTGG+AGG + chr3.1:65588112-65588131 MS.gene79879:intron 15.0%
!!! CATATCTTTTGAATAAAAAT+TGG - chr3.1:65589761-65589780 None:intergenic 15.0%
!!! CTAATAAGTTTCTTTTTTTT+GGG + chr3.1:65589801-65589820 MS.gene79879:intron 15.0%
!!! GTCATTTTATGTTTATTTTT+TGG + chr3.1:65588109-65588128 MS.gene79879:intron 15.0%
!!! TAATAAGTTTCTTTTTTTTG+GGG + chr3.1:65589802-65589821 MS.gene79879:intron 15.0%
!!! TATAACAAATTTTACTTTTG+AGG - chr3.1:65587064-65587083 None:intergenic 15.0%
!!! TATTCAGAATTGAATTTTTT+TGG + chr3.1:65590531-65590550 MS.gene79879:intron 15.0%
!!! TTTGAAATTGTAAATGAAAA+AGG + chr3.1:65588999-65589018 MS.gene79879:intron 15.0%
!! AAAACAACAAATGGAATAAT+TGG - chr3.1:65587001-65587020 None:intergenic 20.0%
!! AAACAACAAATGGAATAATT+GGG - chr3.1:65587000-65587019 None:intergenic 20.0%
!! AAACTTGTAATTGTATTTCA+AGG + chr3.1:65588711-65588730 MS.gene79879:intron 20.0%
!! AACATTGATATGAAAATAGT+TGG - chr3.1:65587466-65587485 None:intergenic 20.0%
!! AGGTTAGATAATTTACATAA+TGG - chr3.1:65588528-65588547 None:intergenic 20.0%
!! ATCGTTAAGTTAATTTAATG+AGG + chr3.1:65590157-65590176 MS.gene79879:intron 20.0%
!! ATGCACATTCAAAAAATATA+AGG - chr3.1:65591114-65591133 None:intergenic 20.0%
!! CATACATAACCAAAAATAAT+AGG + chr3.1:65589570-65589589 MS.gene79879:intron 20.0%
!! CTGAATAAATTCTTAGTTTA+TGG - chr3.1:65590518-65590537 None:intergenic 20.0%
!! TAAACATGATAAAAGTTGAA+TGG - chr3.1:65585746-65585765 None:intergenic 20.0%
!! TAAGTTTCTGATAGATTATT+AGG - chr3.1:65588321-65588340 None:intergenic 20.0%
!! TATCAAATCAAAATATGACA+AGG - chr3.1:65590379-65590398 None:intergenic 20.0%
!! TATCAGAAACTTAATTTATG+TGG + chr3.1:65588328-65588347 MS.gene79879:intron 20.0%
!! TTCATATATCAACTAATGTT+GGG + chr3.1:65590999-65591018 MS.gene79879:intron 20.0%
!! TTCTGTAATACTAACAATTT+AGG + chr3.1:65589605-65589624 MS.gene79879:intron 20.0%
!!! AATAAGTTTCTTTTTTTTGG+GGG + chr3.1:65589803-65589822 MS.gene79879:intron 20.0%
!!! AATTTTTTATAGTGAAAACC+TGG + chr3.1:65590791-65590810 MS.gene79879:intron 20.0%
!!! ACTGTTTCTTTAAAAGAATA+TGG + chr3.1:65590976-65590995 MS.gene79879:intron 20.0%
!!! AGTTAGTTTATCTTGTATTA+GGG - chr3.1:65591560-65591579 None:intergenic 20.0%
!!! CTTTTGTATAAAAAAACAGA+AGG - chr3.1:65589738-65589757 None:intergenic 20.0%
!!! GAAAATAAAAAGGTATTCTT+AGG - chr3.1:65588297-65588316 None:intergenic 20.0%
!!! GCTAATAAGTTTCTTTTTTT+TGG + chr3.1:65589800-65589819 MS.gene79879:intron 20.0%
! AAAAATGACAAATAACTGAC+TGG - chr3.1:65590117-65590136 None:intergenic 25.0%
! AAAATAATAGGATGAAAGCT+CGG + chr3.1:65589582-65589601 MS.gene79879:intron 25.0%
! AATCTCAAACTATGATACTT+TGG + chr3.1:65587402-65587421 MS.gene79879:intron 25.0%
! AATCTTGGTCATTTATTCTA+TGG + chr3.1:65587684-65587703 MS.gene79879:intron 25.0%
! AATGCATGCAAAAGATATTA+AGG + chr3.1:65589690-65589709 MS.gene79879:intron 25.0%
! ACAAGATAAACTAACTCTTA+AGG + chr3.1:65591564-65591583 MS.gene79879:intron 25.0%
! ACTTAATTTATGTGGTCTAT+AGG + chr3.1:65588336-65588355 MS.gene79879:intron 25.0%
! AGTAAAAAGAATGAAACTGA+AGG - chr3.1:65587995-65588014 None:intergenic 25.0%
! AGTCATCTTAATATAAGTCA+TGG + chr3.1:65591295-65591314 MS.gene79879:intron 25.0%
! AGTTTGAACATATATGAGTT+AGG - chr3.1:65589055-65589074 None:intergenic 25.0%
! ATATATGCAGGACTATTTAT+TGG + chr3.1:65587140-65587159 MS.gene79879:intron 25.0%
! ATTTCTATGTTGTGAACTAT+TGG + chr3.1:65591338-65591357 MS.gene79879:intron 25.0%
! GAAAGAAAATTGTTGAAGAT+AGG - chr3.1:65590317-65590336 None:intergenic 25.0%
! GATTAACTGTTATAAGTGAT+TGG - chr3.1:65585792-65585811 None:intergenic 25.0%
! GTAATTGTATTTCAAGGTTA+GGG + chr3.1:65588717-65588736 MS.gene79879:intron 25.0%
! GTAGAAGAAAATGTACATTT+AGG + chr3.1:65585892-65585911 MS.gene79879:CDS 25.0%
! GTTCATATATCAACTAATGT+TGG + chr3.1:65590998-65591017 MS.gene79879:intron 25.0%
! GTTTGAACATATATGAGTTA+GGG - chr3.1:65589054-65589073 None:intergenic 25.0%
! TAGATGAACGAATAAATAGT+AGG - chr3.1:65588560-65588579 None:intergenic 25.0%
! TATCTGACATCTATTATAGA+TGG - chr3.1:65587123-65587142 None:intergenic 25.0%
! TCTAAAAAAAGTTGCATTGT+GGG + chr3.1:65589921-65589940 MS.gene79879:intron 25.0%
! TGTAATTGTATTTCAAGGTT+AGG + chr3.1:65588716-65588735 MS.gene79879:intron 25.0%
! TTATGGATATGAATTTCACT+AGG + chr3.1:65589541-65589560 MS.gene79879:intron 25.0%
! TTCCCAGTAGATAAAATTAT+GGG - chr3.1:65591039-65591058 None:intergenic 25.0%
! TTTCCCAGTAGATAAAATTA+TGG - chr3.1:65591040-65591059 None:intergenic 25.0%
! TTTGCTCATACATATTGTTA+TGG + chr3.1:65589524-65589543 MS.gene79879:intron 25.0%
!! AACATGACTAGTTACATATA+TGG - chr3.1:65589376-65589395 None:intergenic 25.0%
!! AGCTTTCATCCTATTATTTT+TGG - chr3.1:65589582-65589601 None:intergenic 25.0%
!! ATTTATTGGTTGTGGAAATA+TGG + chr3.1:65587154-65587173 MS.gene79879:CDS 25.0%
!! CGTTATTTCATAACAAAGTA+TGG + chr3.1:65590184-65590203 MS.gene79879:intron 25.0%
!! CTCATATTTATCCAGTTTTA+AGG + chr3.1:65591062-65591081 MS.gene79879:intron 25.0%
!! CTTATGTTGTTTACCTATAT+GGG + chr3.1:65586526-65586545 MS.gene79879:CDS 25.0%
!! GAGTTAGTTTATCTTGTATT+AGG - chr3.1:65591561-65591580 None:intergenic 25.0%
!! GTTTATCACTATTTGAAACT+CGG + chr3.1:65585761-65585780 MS.gene79879:intron 25.0%
!! TATTTCAATGCTTTTCTTAG+AGG + chr3.1:65589867-65589886 MS.gene79879:intron 25.0%
!! TCTTATGTTGTTTACCTATA+TGG + chr3.1:65586525-65586544 MS.gene79879:CDS 25.0%
!! TGGTATGTATATTTTCCATT+CGG + chr3.1:65590935-65590954 MS.gene79879:intron 25.0%
!! TTGAAAACATGTGTTTTTCT+AGG - chr3.1:65591651-65591670 None:intergenic 25.0%
!! TTGTTCTGAATAAAGTTAGT+TGG + chr3.1:65587889-65587908 MS.gene79879:intron 25.0%
!!! AATGCAACTACTTTTTATTC+AGG + chr3.1:65590444-65590463 MS.gene79879:intron 25.0%
!!! ATAAGTTTCTTTTTTTTGGG+GGG + chr3.1:65589804-65589823 MS.gene79879:intron 25.0%
!!! ATCAGATTTGTTTTCAAACT+TGG + chr3.1:65589110-65589129 MS.gene79879:intron 25.0%
!!! ATTCCATTTGTTGTTTTTGT+GGG + chr3.1:65587004-65587023 MS.gene79879:CDS 25.0%
!!! CAGTTATTTGTCATTTTTGT+TGG + chr3.1:65590119-65590138 MS.gene79879:intron 25.0%
!!! TATACTTCATGATGGATATT+TGG + chr3.1:65591204-65591223 MS.gene79879:intron 25.0%
!!! TATTCCATTTGTTGTTTTTG+TGG + chr3.1:65587003-65587022 MS.gene79879:CDS 25.0%
!!! TCAGATTTGTTTTCAAACTT+GGG + chr3.1:65589111-65589130 MS.gene79879:intron 25.0%
AAAATATACATACCAGACTG+AGG - chr3.1:65590930-65590949 None:intergenic 30.0%
AAATTGGAATCAAATGGCAT+AGG + chr3.1:65591844-65591863 MS.gene79879:CDS 30.0%
AAGATCCTTGAAGAAAATTG+GGG + chr3.1:65588414-65588433 MS.gene79879:CDS 30.0%
AAGCACATACTATGGTTTAA+AGG - chr3.1:65589144-65589163 None:intergenic 30.0%
AATAGATGTCAGATATATGC+AGG + chr3.1:65587128-65587147 MS.gene79879:intron 30.0%
AATCATTATTGTTGCAGAGT+GGG + chr3.1:65590873-65590892 MS.gene79879:intron 30.0%
AATGGAATAATTGGGTCATT+TGG - chr3.1:65586992-65587011 None:intergenic 30.0%
AATGGTTAACAATAAAGTGG+GGG - chr3.1:65590820-65590839 None:intergenic 30.0%
AATGTTACTGACCTTAAAAC+TGG - chr3.1:65591076-65591095 None:intergenic 30.0%
AATTGGAATCAAATGGCATA+GGG + chr3.1:65591845-65591864 MS.gene79879:CDS 30.0%
AATTGTGGCGAGTATATTTA+TGG + chr3.1:65587627-65587646 MS.gene79879:intron 30.0%
ACAAAGCTATACATTCTGTT+AGG - chr3.1:65588621-65588640 None:intergenic 30.0%
ACGAATGGTTAACAATAAAG+TGG - chr3.1:65590823-65590842 None:intergenic 30.0%
ACTGAATACATACATGACTA+TGG - chr3.1:65591278-65591297 None:intergenic 30.0%
AGAATAAATGACCAAGATTC+TGG - chr3.1:65587683-65587702 None:intergenic 30.0%
AGAGTAAAAATGCCAAGATA+GGG - chr3.1:65591717-65591736 None:intergenic 30.0%
AGCATTTATGTTGACAGTAA+AGG - chr3.1:65589089-65589108 None:intergenic 30.0%
AGGACAATCAAATAAACGAA+TGG - chr3.1:65590838-65590857 None:intergenic 30.0%
AGGATAACCTAATTTGACTA+AGG + chr3.1:65589710-65589729 MS.gene79879:intron 30.0%
ATTCAGCGACTCAATTAATA+AGG + chr3.1:65586245-65586264 MS.gene79879:CDS 30.0%
CAAGATCCTTGAAGAAAATT+GGG + chr3.1:65588413-65588432 MS.gene79879:CDS 30.0%
CATATTCATAGAGATTCAAC+AGG + chr3.1:65586655-65586674 MS.gene79879:intron 30.0%
CGAATGGTTAACAATAAAGT+GGG - chr3.1:65590822-65590841 None:intergenic 30.0%
CTGAATACATACATGACTAT+GGG - chr3.1:65591277-65591296 None:intergenic 30.0%
GAATGGTTAACAATAAAGTG+GGG - chr3.1:65590821-65590840 None:intergenic 30.0%
GAGAAAACATTGCAGTTAAT+TGG + chr3.1:65590895-65590914 MS.gene79879:CDS 30.0%
GAGTCAAAACGTCTTATATA+TGG + chr3.1:65586750-65586769 MS.gene79879:intron 30.0%
GATATCTGTGTGTTAAAGTT+AGG + chr3.1:65588050-65588069 MS.gene79879:intron 30.0%
GGATAACCTAATTTGACTAA+GGG + chr3.1:65589711-65589730 MS.gene79879:intron 30.0%
GTCTAATAAGCAGATATACA+TGG + chr3.1:65586931-65586950 MS.gene79879:intron 30.0%
TAACATATCATGTCCATTTC+AGG + chr3.1:65587742-65587761 MS.gene79879:intron 30.0%
TAATGTTGGGAATAGCATAA+CGG + chr3.1:65591012-65591031 MS.gene79879:intron 30.0%
TAGAGTAAAAATGCCAAGAT+AGG - chr3.1:65591718-65591737 None:intergenic 30.0%
TAGCAGCTTCAGAAAAAAAA+TGG + chr3.1:65589897-65589916 MS.gene79879:intron 30.0%
TAGCTACATGAAGTCTAAAA+TGG - chr3.1:65591522-65591541 None:intergenic 30.0%
TATAAACACTGTCTCAGTTT+GGG + chr3.1:65585963-65585982 MS.gene79879:CDS 30.0%
TGATAGAGATACTTCTTTGT+AGG - chr3.1:65588848-65588867 None:intergenic 30.0%
TTATTGCAGATTCCCTTATT+TGG + chr3.1:65585817-65585836 MS.gene79879:intron 30.0%
TTCAGCAACAAAATAAGGTT+TGG - chr3.1:65588591-65588610 None:intergenic 30.0%
TTCAGCGACTCAATTAATAA+GGG + chr3.1:65586246-65586265 MS.gene79879:CDS 30.0%
TTGCAAAACAATCAACTGAA+GGG + chr3.1:65586055-65586074 MS.gene79879:CDS 30.0%
TTGCAGTTAATTGGTGTATT+TGG + chr3.1:65590904-65590923 MS.gene79879:CDS 30.0%
TTTCTTCCATATGAAACTCT+CGG + chr3.1:65587948-65587967 MS.gene79879:intron 30.0%
TTTGCAAAACAATCAACTGA+AGG + chr3.1:65586054-65586073 MS.gene79879:CDS 30.0%
! ATGCATTTTTGTATGTTCAC+AGG + chr3.1:65590001-65590020 MS.gene79879:intron 30.0%
! CAAGTTATGGTCAATTTTTG+AGG + chr3.1:65587266-65587285 MS.gene79879:intron 30.0%
! CATTTTATGAAAGCAAAGTC+AGG + chr3.1:65587322-65587341 MS.gene79879:intron 30.0%
! CGTAGTAGCATTTTTAACAA+CGG - chr3.1:65586322-65586341 None:intergenic 30.0%
! CTCTAAAAAAAGTTGCATTG+TGG + chr3.1:65589920-65589939 MS.gene79879:intron 30.0%
! GACTAGTTACATATATGGAT+CGG - chr3.1:65589371-65589390 None:intergenic 30.0%
! GTACATTTAGGTTTGCATTA+TGG + chr3.1:65585904-65585923 MS.gene79879:CDS 30.0%
! GTACTTGATAATATTGCTTC+TGG - chr3.1:65586111-65586130 None:intergenic 30.0%
! GTTTGAGATTAGAAAAAGAG+TGG - chr3.1:65587392-65587411 None:intergenic 30.0%
! TAAAGTTAGTTGGAAGTGTA+TGG + chr3.1:65587899-65587918 MS.gene79879:intron 30.0%
! TAACAGAATGTATAGCTTTG+TGG + chr3.1:65588620-65588639 MS.gene79879:intron 30.0%
! TATTGCAGATTCCCTTATTT+GGG + chr3.1:65585818-65585837 MS.gene79879:intron 30.0%
! TATTTTACAGAATCCGTACT+TGG + chr3.1:65589398-65589417 MS.gene79879:intron 30.0%
! TGCAGATAATGCTTTTAGTA+AGG + chr3.1:65586344-65586363 MS.gene79879:CDS 30.0%
!! AGGCATTTTTAATTCAAAGC+GGG + chr3.1:65587286-65587305 MS.gene79879:intron 30.0%
!! CAGATTTGTTTTCAAACTTG+GGG + chr3.1:65589112-65589131 MS.gene79879:intron 30.0%
!! GAATAAGTTGATTGTGCATA+GGG - chr3.1:65589333-65589352 None:intergenic 30.0%
!! GAGGCATTTTTAATTCAAAG+CGG + chr3.1:65587285-65587304 MS.gene79879:intron 30.0%
!! TGAATAAGTTGATTGTGCAT+AGG - chr3.1:65589334-65589353 None:intergenic 30.0%
!! TGTTTTAAACCAACCTCAAT+TGG - chr3.1:65587593-65587612 None:intergenic 30.0%
!!! AGCTTTTCAAGTGAAATAGA+TGG + chr3.1:65586417-65586436 MS.gene79879:CDS 30.0%
!!! AGTTTTAAGGTCAGTAACAT+TGG + chr3.1:65591075-65591094 MS.gene79879:intron 30.0%
!!! ATTTTTTGGAGGACATTAGA+TGG + chr3.1:65588123-65588142 MS.gene79879:intron 30.0%
!!! GCAATTTTTAGGTTTTGGTA+CGG + chr3.1:65590064-65590083 MS.gene79879:CDS 30.0%
!!! TAAGTTTCTTTTTTTTGGGG+GGG + chr3.1:65589805-65589824 MS.gene79879:intron 30.0%
AACACATCAATAACCAAACC+AGG - chr3.1:65586459-65586478 None:intergenic 35.0%
AACCATAGTATGTGCTTTAG+TGG + chr3.1:65589147-65589166 MS.gene79879:intron 35.0%
AAGATTTGAACCAAGATGTG+AGG + chr3.1:65591177-65591196 MS.gene79879:CDS 35.0%
AATGCCTTACCTATGTGAAA+TGG + chr3.1:65587650-65587669 MS.gene79879:intron 35.0%
AATGTTGGGAATAGCATAAC+GGG + chr3.1:65591013-65591032 MS.gene79879:intron 35.0%
ACCTCAATACAGTAGAAAAC+AGG + chr3.1:65590212-65590231 MS.gene79879:intron 35.0%
ACTATGATACTTTGGTGGAA+TGG + chr3.1:65587410-65587429 MS.gene79879:intron 35.0%
AGAAATAGACCTGAGAAGAA+GGG - chr3.1:65585721-65585740 None:intergenic 35.0%
AGAGTGGAACAAACATAGAA+TGG - chr3.1:65587376-65587395 None:intergenic 35.0%
AGCCAACTTCACATATAAAC+TGG - chr3.1:65590649-65590668 None:intergenic 35.0%
AGTTAGTTATATGCTTGCAG+AGG - chr3.1:65590619-65590638 None:intergenic 35.0%
ATACATGGCTTTCTATTCAC+TGG + chr3.1:65586946-65586965 MS.gene79879:CDS 35.0%
ATCTCTATGTCCAATTCGAA+AGG + chr3.1:65585849-65585868 MS.gene79879:CDS 35.0%
ATGGTATTCCTGATATTCGA+CGG + chr3.1:65587537-65587556 MS.gene79879:CDS 35.0%
ATTAGCTAAAACAGTAGGCT+GGG - chr3.1:65589647-65589666 None:intergenic 35.0%
CAAGCAACAAAAACCTTTAC+AGG - chr3.1:65591780-65591799 None:intergenic 35.0%
CAATCATTATTGTTGCAGAG+TGG + chr3.1:65590872-65590891 MS.gene79879:intron 35.0%
CAGCATTTCAAACGTGTAAA+AGG + chr3.1:65591417-65591436 MS.gene79879:intron 35.0%
CATGCACAAATGCTAATACA+TGG + chr3.1:65588922-65588941 MS.gene79879:intron 35.0%
CCAAAACCTAAAAATTGCCA+AGG - chr3.1:65590062-65590081 None:intergenic 35.0%
CCAAACAAATGCAAACAGAT+AGG - chr3.1:65587443-65587462 None:intergenic 35.0%
CCTATATCAGATATAGAAGC+AGG - chr3.1:65588684-65588703 None:intergenic 35.0%
CCTATCTGTTTGCATTTGTT+TGG + chr3.1:65587440-65587459 MS.gene79879:intron 35.0%
CCTGCTTCTATATCTGATAT+AGG + chr3.1:65588681-65588700 MS.gene79879:intron 35.0%
CGAATAAATAGTAGGACAGA+TGG - chr3.1:65588552-65588571 None:intergenic 35.0%
CTATAAACACTGTCTCAGTT+TGG + chr3.1:65585962-65585981 MS.gene79879:CDS 35.0%
CTCAAACTATGATACTTTGG+TGG + chr3.1:65587405-65587424 MS.gene79879:intron 35.0%
CTCTCAAAATCCTTTCGAAT+TGG - chr3.1:65585862-65585881 None:intergenic 35.0%
CTTGAAGAAAATTGGGGTTA+AGG + chr3.1:65588420-65588439 MS.gene79879:CDS 35.0%
GACAAATACCTCATTGAGTA+TGG - chr3.1:65589496-65589515 None:intergenic 35.0%
GAGTGGAACAAACATAGAAT+GGG - chr3.1:65587375-65587394 None:intergenic 35.0%
GCAACAAAATAAGGTTTGGA+AGG - chr3.1:65588587-65588606 None:intergenic 35.0%
GCAAGATCCTTGAAGAAAAT+TGG + chr3.1:65588412-65588431 MS.gene79879:CDS 35.0%
GCTGCAAATCTTTAATGTGT+TGG + chr3.1:65588472-65588491 MS.gene79879:intron 35.0%
GCTGGAAAATTGGAATCAAA+TGG + chr3.1:65591838-65591857 MS.gene79879:CDS 35.0%
GTTTGAATCTGTGTCGAATT+TGG + chr3.1:65586149-65586168 MS.gene79879:CDS 35.0%
TAGAAATAGACCTGAGAAGA+AGG - chr3.1:65585722-65585741 None:intergenic 35.0%
TCAACATACGATTTGTGAAC+AGG - chr3.1:65586903-65586922 None:intergenic 35.0%
TCAGTTTACACTCATAACTG+AGG - chr3.1:65588899-65588918 None:intergenic 35.0%
TGATATCCGAGAGTTTCATA+TGG - chr3.1:65587957-65587976 None:intergenic 35.0%
TGCAAAGTCTACTAATTCCT+CGG - chr3.1:65586040-65586059 None:intergenic 35.0%
TGCCAGTTTATATGTGAAGT+TGG + chr3.1:65590644-65590663 MS.gene79879:intron 35.0%
TGTTCCATTTCACATAGGTA+AGG - chr3.1:65587657-65587676 None:intergenic 35.0%
TTACCTATGTGAAATGGAAC+AGG + chr3.1:65587656-65587675 MS.gene79879:intron 35.0%
TTCTGAACATCCAATGATGA+AGG - chr3.1:65591883-65591902 None:intergenic 35.0%
TTGAATAATAGCAGCGATCA+AGG - chr3.1:65587819-65587838 None:intergenic 35.0%
TTGCAGAGGAACATACTAAA+GGG - chr3.1:65590605-65590624 None:intergenic 35.0%
TTGCTTGCTCCTGTTAAAAT+TGG + chr3.1:65591793-65591812 MS.gene79879:CDS 35.0%
! AAAATTTTGCCAAGCGTCTA+GGG - chr3.1:65587931-65587950 None:intergenic 35.0%
! AAATTGACCATAACTTGCCT+CGG - chr3.1:65587263-65587282 None:intergenic 35.0%
! ACCTGTTTTCTACTGTATTG+AGG - chr3.1:65590216-65590235 None:intergenic 35.0%
! AGGTGATTAGCTAAAACAGT+AGG - chr3.1:65589652-65589671 None:intergenic 35.0%
! ATCACTATTTGAAACTCGGT+AGG + chr3.1:65585765-65585784 MS.gene79879:intron 35.0%
! ATTGCAGATTCCCTTATTTG+GGG + chr3.1:65585819-65585838 MS.gene79879:intron 35.0%
! CTATTGGCTATATAGCAGTA+TGG + chr3.1:65591354-65591373 MS.gene79879:intron 35.0%
! CTTAACCCCAATTTTCTTCA+AGG - chr3.1:65588422-65588441 None:intergenic 35.0%
! GGCCCATAATTTTATCTACT+GGG + chr3.1:65591034-65591053 MS.gene79879:intron 35.0%
! TATTGGTTGTGGAAATATGG+AGG + chr3.1:65587157-65587176 MS.gene79879:CDS 35.0%
! TCTAAAATGGAAACTGCATG+TGG - chr3.1:65591509-65591528 None:intergenic 35.0%
! TGTTGTTTACCTATATGGGT+CGG + chr3.1:65586530-65586549 MS.gene79879:CDS 35.0%
! TTTTATTCAGGCACTACTTG+CGG + chr3.1:65590456-65590475 MS.gene79879:intron 35.0%
!! AGAATGTATAGCTTTGTGGT+AGG + chr3.1:65588624-65588643 MS.gene79879:intron 35.0%
!! ATCAAGTACTGATACAACGT+CGG + chr3.1:65586122-65586141 MS.gene79879:CDS 35.0%
!! GTAAATGAAGTTCTGAGTGA+GGG - chr3.1:65585934-65585953 None:intergenic 35.0%
!! TGTAAATGAAGTTCTGAGTG+AGG - chr3.1:65585935-65585954 None:intergenic 35.0%
!!! AAGTTTCTTTTTTTTGGGGG+GGG + chr3.1:65589806-65589825 MS.gene79879:intron 35.0%
!!! CCTTGGCAATTTTTAGGTTT+TGG + chr3.1:65590059-65590078 MS.gene79879:CDS 35.0%
AAAACAAAGTCTCCGCATCA+AGG + chr3.1:65589446-65589465 MS.gene79879:CDS 40.0%
ACCTACATCACCTTCATCAT+TGG + chr3.1:65591870-65591889 MS.gene79879:CDS 40.0%
AGATGGTTGGGATTCATGTT+TGG - chr3.1:65591926-65591945 None:intergenic 40.0%
AGATTGAAGTCCCCCAAATA+AGG - chr3.1:65585833-65585852 None:intergenic 40.0%
AGCACTTACCATACTCAATG+AGG + chr3.1:65589485-65589504 MS.gene79879:CDS 40.0%
AGCATCCAACACAATAACCT+TGG - chr3.1:65588368-65588387 None:intergenic 40.0%
AGGATATTAGACCTTCTCCT+TGG + chr3.1:65590042-65590061 MS.gene79879:CDS 40.0%
AGTATACTCACCTCACATCT+TGG - chr3.1:65591190-65591209 None:intergenic 40.0%
AGTGTAACTCCAATTGAGGT+TGG + chr3.1:65587581-65587600 MS.gene79879:intron 40.0%
ATAAAGCAGCACAAGTCTTG+AGG + chr3.1:65586604-65586623 MS.gene79879:CDS 40.0%
ATATGACAAGGATGCTTTCG+TGG - chr3.1:65590367-65590386 None:intergenic 40.0%
ATCACCAGACCATATATCTG+CGG + chr3.1:65591132-65591151 MS.gene79879:intron 40.0%
ATCATTGGATGTTCAGAACC+GGG + chr3.1:65591885-65591904 MS.gene79879:CDS 40.0%
ATGGAAACTGCATGTGGATT+TGG - chr3.1:65591503-65591522 None:intergenic 40.0%
ATTCTCGCAGGTGTCAATTT+GGG + chr3.1:65589267-65589286 MS.gene79879:intron 40.0%
CACCACTAAAGCACATACTA+TGG - chr3.1:65589152-65589171 None:intergenic 40.0%
CACTTGTGCATGATGTTACA+AGG - chr3.1:65590757-65590776 None:intergenic 40.0%
CAGGCTTCAGCAACAAAATA+AGG - chr3.1:65588596-65588615 None:intergenic 40.0%
CAGTTCCAAGGTTATTGTGT+TGG + chr3.1:65588360-65588379 MS.gene79879:CDS 40.0%
CATCATTGGATGTTCAGAAC+CGG + chr3.1:65591884-65591903 MS.gene79879:CDS 40.0%
CCTAAAAATTGCCAAGGAGA+AGG - chr3.1:65590056-65590075 None:intergenic 40.0%
CTATACATTCTGTTAGGCAC+AGG - chr3.1:65588615-65588634 None:intergenic 40.0%
CTGTGTCGAATTTGGTTGAA+GGG + chr3.1:65586157-65586176 MS.gene79879:CDS 40.0%
CTTGCAGAGGAACATACTAA+AGG - chr3.1:65590606-65590625 None:intergenic 40.0%
CTTGCTCCTGTTAAAATTGG+AGG + chr3.1:65591796-65591815 MS.gene79879:CDS 40.0%
GAAAATTCACCACTTAGTGC+TGG + chr3.1:65585985-65586004 MS.gene79879:CDS 40.0%
GAAATAGACCTGAGAAGAAG+GGG - chr3.1:65585720-65585739 None:intergenic 40.0%
GAAGGACCCTTAGTCAAATT+AGG - chr3.1:65589720-65589739 None:intergenic 40.0%
GAGCCCACAAAAACAACAAA+TGG - chr3.1:65587010-65587029 None:intergenic 40.0%
GAGGTGAGTATACTTCATGA+TGG + chr3.1:65591196-65591215 MS.gene79879:intron 40.0%
GATTCCAGCAAAAACTTCAG+TGG - chr3.1:65586217-65586236 None:intergenic 40.0%
GATTGAAGTCCCCCAAATAA+GGG - chr3.1:65585832-65585851 None:intergenic 40.0%
GCAAAGTCTACTAATTCCTC+GGG - chr3.1:65586039-65586058 None:intergenic 40.0%
GTGGAAATATGGAGGTTACT+CGG + chr3.1:65587165-65587184 MS.gene79879:CDS 40.0%
GTTATTGTGTTGGATGCTGA+TGG + chr3.1:65588370-65588389 MS.gene79879:CDS 40.0%
TAAATAGTAGGACAGATGGC+AGG - chr3.1:65588548-65588567 None:intergenic 40.0%
TAAATCAGCTTTCGAGCTCT+TGG + chr3.1:65587201-65587220 MS.gene79879:CDS 40.0%
TAACATCATGCACAAGTGAC+TGG + chr3.1:65590759-65590778 MS.gene79879:intron 40.0%
TACTTTGTACCCTGCATGAT+AGG + chr3.1:65588164-65588183 MS.gene79879:intron 40.0%
TATTCACTGGAGAAGAGTCT+TGG + chr3.1:65586959-65586978 MS.gene79879:CDS 40.0%
TCCAATGATGAAGGTGATGT+AGG - chr3.1:65591874-65591893 None:intergenic 40.0%
TCCATACGCAAGTTGTTGAA+GGG + chr3.1:65587773-65587792 MS.gene79879:CDS 40.0%
TCCTGTTAAAATTGGAGGTC+AGG + chr3.1:65591801-65591820 MS.gene79879:CDS 40.0%
TCTGTGTCGAATTTGGTTGA+AGG + chr3.1:65586156-65586175 MS.gene79879:CDS 40.0%
TGAACAGGCTAGAAAATTGC+TGG - chr3.1:65586888-65586907 None:intergenic 40.0%
TGAGAAGAAGGGGAATAACA+CGG - chr3.1:65585710-65585729 None:intergenic 40.0%
TGGAAACTGCATGTGGATTT+GGG - chr3.1:65591502-65591521 None:intergenic 40.0%
TGGAAATATGGAGGTTACTC+GGG + chr3.1:65587166-65587185 MS.gene79879:CDS 40.0%
TGGTATTCCTGATATTCGAC+GGG + chr3.1:65587538-65587557 MS.gene79879:CDS 40.0%
TGTCTTCTTCTGTCCTGTAA+AGG + chr3.1:65591764-65591783 MS.gene79879:intron 40.0%
TGTGTCGAATTTGGTTGAAG+GGG + chr3.1:65586158-65586177 MS.gene79879:CDS 40.0%
TTGAGAGAAACTGTGGATTC+AGG - chr3.1:65591976-65591995 None:intergenic 40.0%
TTGAGAGTTCTCTGTCAAGT+GGG + chr3.1:65586499-65586518 MS.gene79879:CDS 40.0%
TTGCTCATATCTGTCTATCG+AGG - chr3.1:65591464-65591483 None:intergenic 40.0%
TTTATTCAGGCACTACTTGC+GGG + chr3.1:65590457-65590476 MS.gene79879:intron 40.0%
! AAAGAGTGTAGCAGTTAGTC+CGG + chr3.1:65590563-65590582 MS.gene79879:intron 40.0%
! AAATTTTGCCAAGCGTCTAG+GGG - chr3.1:65587930-65587949 None:intergenic 40.0%
! AAGAGCTCGAAAGCTGATTT+AGG - chr3.1:65587202-65587221 None:intergenic 40.0%
! AGAGCTCGAAAGCTGATTTA+GGG - chr3.1:65587201-65587220 None:intergenic 40.0%
! AGAGTGTCTCATCTAGTGAT+GGG - chr3.1:65588968-65588987 None:intergenic 40.0%
! CCTTCTCCTTGGCAATTTTT+AGG + chr3.1:65590053-65590072 MS.gene79879:CDS 40.0%
! GAAAATTTTGCCAAGCGTCT+AGG - chr3.1:65587932-65587951 None:intergenic 40.0%
! GATTAGCTAAAACAGTAGGC+TGG - chr3.1:65589648-65589667 None:intergenic 40.0%
! GCAGGACTATTTATTGGTTG+TGG + chr3.1:65587146-65587165 MS.gene79879:intron 40.0%
! GGGCCCATAATTTTATCTAC+TGG + chr3.1:65591033-65591052 MS.gene79879:intron 40.0%
! GTTTTCTGCTGCTGATCAAA+CGG + chr3.1:65586368-65586387 MS.gene79879:CDS 40.0%
! TAATTGAAGCACTTGCCGAA+TGG - chr3.1:65590953-65590972 None:intergenic 40.0%
! TTGCAGATTCCCTTATTTGG+GGG + chr3.1:65585820-65585839 MS.gene79879:intron 40.0%
! TTTTCTGCTGCTGATCAAAC+GGG + chr3.1:65586369-65586388 MS.gene79879:CDS 40.0%
!! AGTATGGTAAGTGCTGTTTC+AGG - chr3.1:65589480-65589499 None:intergenic 40.0%
!! CGAAAGGATTTTGAGAGTAG+AGG + chr3.1:65585865-65585884 MS.gene79879:CDS 40.0%
!! TAGCTTTGTGGTAGGAGATT+TGG + chr3.1:65588632-65588651 MS.gene79879:intron 40.0%
!! TCAAGTACTGATACAACGTC+GGG + chr3.1:65586123-65586142 MS.gene79879:CDS 40.0%
!! TCATGTCCATTTCAGGTTGA+TGG + chr3.1:65587749-65587768 MS.gene79879:intron 40.0%
!!! AGTTTCTTTTTTTTGGGGGG+GGG + chr3.1:65589807-65589826 MS.gene79879:intron 40.0%
AAACCCGCAGATATATGGTC+TGG - chr3.1:65591139-65591158 None:intergenic 45.0%
AAACTGTGGATTCAGGAGTC+GGG - chr3.1:65591969-65591988 None:intergenic 45.0%
AAATGCTCTTCGAAGCTCAG+TGG + chr3.1:65586272-65586291 MS.gene79879:CDS 45.0%
AACCCAAGTGGGTCAGTATA+GGG - chr3.1:65589190-65589209 None:intergenic 45.0%
AAGTACAGCATTTGAGTCCC+CGG - chr3.1:65587227-65587246 None:intergenic 45.0%
ACAATAAAGTGGGGGAAACC+AGG - chr3.1:65590812-65590831 None:intergenic 45.0%
ACCCTTCAACAACTTGCGTA+TGG - chr3.1:65587777-65587796 None:intergenic 45.0%
AGACCTACACCTATCATGCA+GGG - chr3.1:65588176-65588195 None:intergenic 45.0%
AGGATGCTTTCGTGGTATCA+AGG - chr3.1:65590359-65590378 None:intergenic 45.0%
AGTTTCTTCCTGCAGAGATC+AGG + chr3.1:65586559-65586578 MS.gene79879:CDS 45.0%
ATACGCAAGTTGTTGAAGGG+TGG + chr3.1:65587776-65587795 MS.gene79879:CDS 45.0%
ATGGAACAGGTCCAGAATCT+TGG + chr3.1:65587669-65587688 MS.gene79879:intron 45.0%
ATGGAGCCATCAACCTGAAA+TGG - chr3.1:65587758-65587777 None:intergenic 45.0%
CACTAGATGAGACACTCTGA+TGG + chr3.1:65588970-65588989 MS.gene79879:intron 45.0%
CAGGACTTGCGAGAAAAAGA+TGG + chr3.1:65587518-65587537 MS.gene79879:intron 45.0%
CCCTTCACTATCAGATGGTT+GGG - chr3.1:65591938-65591957 None:intergenic 45.0%
CGAAGAAACCCGCAGATATA+TGG - chr3.1:65591144-65591163 None:intergenic 45.0%
CTCCATACGCAAGTTGTTGA+AGG + chr3.1:65587772-65587791 MS.gene79879:CDS 45.0%
CTGAATTCTCCAGCACTAAG+TGG - chr3.1:65585997-65586016 None:intergenic 45.0%
GAAACTGTGGATTCAGGAGT+CGG - chr3.1:65591970-65591989 None:intergenic 45.0%
GATTCTCGCAGGTGTCAATT+TGG + chr3.1:65589266-65589285 MS.gene79879:intron 45.0%
GCAAGTCCTGCATAAAGGAA+AGG - chr3.1:65587508-65587527 None:intergenic 45.0%
GCTGATGGTACTCGTTCTAA+AGG + chr3.1:65588385-65588404 MS.gene79879:CDS 45.0%
GGAAGCTGAAGCAATTCTAG+AGG + chr3.1:65590022-65590041 MS.gene79879:intron 45.0%
GGACCTGTTCCATTTCACAT+AGG - chr3.1:65587662-65587681 None:intergenic 45.0%
GTGTCGAATTTGGTTGAAGG+GGG + chr3.1:65586159-65586178 MS.gene79879:CDS 45.0%
GTTGAGAGTTCTCTGTCAAG+TGG + chr3.1:65586498-65586517 MS.gene79879:CDS 45.0%
GTTTCTTCCTGCAGAGATCA+GGG + chr3.1:65586560-65586579 MS.gene79879:CDS 45.0%
TCACCAGACCATATATCTGC+GGG + chr3.1:65591133-65591152 MS.gene79879:intron 45.0%
TCCCTTCACTATCAGATGGT+TGG - chr3.1:65591939-65591958 None:intergenic 45.0%
TCTCAACTGCAACCACTGTA+CGG - chr3.1:65586485-65586504 None:intergenic 45.0%
TGAGAGTTCTCTGTCAAGTG+GGG + chr3.1:65586500-65586519 MS.gene79879:CDS 45.0%
TGATTGCGCTTTGTCAGATC+AGG - chr3.1:65590858-65590877 None:intergenic 45.0%
TGCGAGTGTAACTCCAATTG+AGG + chr3.1:65587577-65587596 MS.gene79879:CDS 45.0%
TGCGGGTTTCTTCGTATGAA+AGG + chr3.1:65591150-65591169 MS.gene79879:CDS 45.0%
TGGGCTCTTCAGCAACATTA+TGG + chr3.1:65587023-65587042 MS.gene79879:CDS 45.0%
TGGTCTATAGGACAGTTCCA+AGG + chr3.1:65588348-65588367 MS.gene79879:intron 45.0%
TTATTCAGGCACTACTTGCG+GGG + chr3.1:65590458-65590477 MS.gene79879:intron 45.0%
TTCTCGCAAGTCCTGCATAA+AGG - chr3.1:65587513-65587532 None:intergenic 45.0%
TTGCCTTGCATCTCGAAACA+GGG + chr3.1:65587862-65587881 MS.gene79879:intron 45.0%
TTTCTGCTGCTGATCAAACG+GGG + chr3.1:65586370-65586389 MS.gene79879:CDS 45.0%
TTTGCCTTGCATCTCGAAAC+AGG + chr3.1:65587861-65587880 MS.gene79879:intron 45.0%
! AAGAGTGTAGCAGTTAGTCC+GGG + chr3.1:65590564-65590583 MS.gene79879:intron 45.0%
! CAGAGTGTCTCATCTAGTGA+TGG - chr3.1:65588969-65588988 None:intergenic 45.0%
! CAGGTTTGAGTTCCTTGATG+CGG - chr3.1:65589461-65589480 None:intergenic 45.0%
! CCCAACCATCTGATAGTGAA+GGG + chr3.1:65591935-65591954 MS.gene79879:CDS 45.0%
! GAGCTCGAAAGCTGATTTAG+GGG - chr3.1:65587200-65587219 None:intergenic 45.0%
! GTGTTATTCCCCTTCTTCTC+AGG + chr3.1:65585709-65585728 MS.gene79879:CDS 45.0%
! TCCCAACCATCTGATAGTGA+AGG + chr3.1:65591934-65591953 MS.gene79879:CDS 45.0%
! TCTTCGAAGCTCAGTGGATT+CGG + chr3.1:65586278-65586297 MS.gene79879:CDS 45.0%
! TGGAGGTCAGGCATTTTCAT+GGG + chr3.1:65591813-65591832 MS.gene79879:CDS 45.0%
! TTCATGGGCTGCTGGAAAAT+TGG + chr3.1:65591828-65591847 MS.gene79879:CDS 45.0%
! TTGGAGGTCAGGCATTTTCA+TGG + chr3.1:65591812-65591831 MS.gene79879:CDS 45.0%
!! AGTGCCACTGAAGTTTTTGC+TGG + chr3.1:65586210-65586229 MS.gene79879:CDS 45.0%
!! CAAGTACTGATACAACGTCG+GGG + chr3.1:65586124-65586143 MS.gene79879:CDS 45.0%
!! GCCTGACCTCCAATTTTAAC+AGG - chr3.1:65591805-65591824 None:intergenic 45.0%
!! TCCTACTTTTCACCATGCCA+CGG - chr3.1:65588751-65588770 None:intergenic 45.0%
!!! GTTTCTTTTTTTTGGGGGGG+GGG + chr3.1:65589808-65589827 MS.gene79879:intron 45.0%
!!! TTTCTTTTTTTTGGGGGGGG+GGG + chr3.1:65589809-65589828 MS.gene79879:intron 45.0%
AAGCCACCTTCGACCAAGTA+CGG - chr3.1:65589414-65589433 None:intergenic 50.0%
AATCCGTACTTGGTCGAAGG+TGG + chr3.1:65589408-65589427 MS.gene79879:CDS 50.0%
ACAGTAGGCTGGGTAAGAAG+AGG - chr3.1:65589637-65589656 None:intergenic 50.0%
ACTGGAGAAGAGTCTTGGCT+TGG + chr3.1:65586964-65586983 MS.gene79879:CDS 50.0%
ACTGTATCCCTGATCTCTGC+AGG - chr3.1:65586570-65586589 None:intergenic 50.0%
ACTTATAGATGTCCGCTCCG+AGG + chr3.1:65587243-65587262 MS.gene79879:CDS 50.0%
AGAAGGGGAATAACACGGTG+TGG - chr3.1:65585705-65585724 None:intergenic 50.0%
AGACCCTGTTTCGAGATGCA+AGG - chr3.1:65587868-65587887 None:intergenic 50.0%
AGAGTGTAGCAGTTAGTCCG+GGG + chr3.1:65590565-65590584 MS.gene79879:intron 50.0%
CAACCCAAGTGGGTCAGTAT+AGG - chr3.1:65589191-65589210 None:intergenic 50.0%
CACAAGTCTTGAGGCCTGTT+GGG + chr3.1:65586613-65586632 MS.gene79879:CDS 50.0%
CAGAATCCGTACTTGGTCGA+AGG + chr3.1:65589405-65589424 MS.gene79879:intron 50.0%
CAGACCTACACCTATCATGC+AGG - chr3.1:65588177-65588196 None:intergenic 50.0%
CAGCGATCAAGGAGTCATCT+AGG - chr3.1:65587808-65587827 None:intergenic 50.0%
CCAAGATAGGGTACACAAGC+TGG - chr3.1:65591705-65591724 None:intergenic 50.0%
CCAGCTTGTGTACCCTATCT+TGG + chr3.1:65591702-65591721 MS.gene79879:intron 50.0%
CGAAGGTGGCTTTCAGTCTT+GGG + chr3.1:65589422-65589441 MS.gene79879:CDS 50.0%
CTATACTGACCCACTTGGGT+TGG + chr3.1:65589189-65589208 MS.gene79879:intron 50.0%
CTTGGAGTGTGCTTCTCTCA+AGG + chr3.1:65589234-65589253 MS.gene79879:intron 50.0%
GCGGGGTCATATGCATTAGT+AGG + chr3.1:65590475-65590494 MS.gene79879:CDS 50.0%
GCTGCTCCTTTCCTTTATGC+AGG + chr3.1:65587499-65587518 MS.gene79879:intron 50.0%
GTACCCTGCATGATAGGTGT+AGG + chr3.1:65588170-65588189 MS.gene79879:intron 50.0%
GTGTGCTTCTCTCAAGGTTC+AGG + chr3.1:65589240-65589259 MS.gene79879:intron 50.0%
TCGAAGGTGGCTTTCAGTCT+TGG + chr3.1:65589421-65589440 MS.gene79879:CDS 50.0%
TGGAATAACCCCTAGACGCT+TGG + chr3.1:65587919-65587938 MS.gene79879:intron 50.0%
TGGCTCCCTTCACTATCAGA+TGG - chr3.1:65591943-65591962 None:intergenic 50.0%
TGGTGTATTTGGCCTCAGTC+TGG + chr3.1:65590915-65590934 MS.gene79879:CDS 50.0%
TGTTCAGAACCGGGTACTAC+AGG + chr3.1:65591894-65591913 MS.gene79879:CDS 50.0%
TGTTGGGTCTGCAACTCAAC+AGG + chr3.1:65586629-65586648 MS.gene79879:CDS 50.0%
TTACCTATATGGGTCGGCGA+AGG + chr3.1:65586536-65586555 MS.gene79879:CDS 50.0%
TTCTGCTGCTGATCAAACGG+GGG + chr3.1:65586371-65586390 MS.gene79879:CDS 50.0%
! ATTGCTTCTGGTTGCACAGC+AGG - chr3.1:65586099-65586118 None:intergenic 50.0%
! CTTGAGAGAAGCACACTCCA+AGG - chr3.1:65589236-65589255 None:intergenic 50.0%
! TGTTGAGTTGCAGACCCAAC+AGG - chr3.1:65586630-65586649 None:intergenic 50.0%
!! GGATTTTGAGAGTAGAGGCG+TGG + chr3.1:65585870-65585889 MS.gene79879:CDS 50.0%
!! TCAATTTGGGCGGGCTAGTT+TGG + chr3.1:65589280-65589299 MS.gene79879:intron 50.0%
!!! TTCTTTTTTTTGGGGGGGGG+GGG + chr3.1:65589810-65589829 MS.gene79879:intron 50.0%
AACCAAACCAGGCGCTTTGC+TGG - chr3.1:65586448-65586467 None:intergenic 55.0%
ACCAACAGGCCAACCCAAGT+GGG - chr3.1:65589201-65589220 None:intergenic 55.0%
ACGCCCTATACTGACCCACT+TGG + chr3.1:65589184-65589203 MS.gene79879:intron 55.0%
ACTCCTTCGCCGACCCATAT+AGG - chr3.1:65586542-65586561 None:intergenic 55.0%
AGGTTAGGGTTGAAGAGCCG+TGG + chr3.1:65588731-65588750 MS.gene79879:intron 55.0%
CACGGTGTGGCTGAGCAAAA+AGG - chr3.1:65585692-65585711 None:intergenic 55.0%
CGCCCTATACTGACCCACTT+GGG + chr3.1:65589185-65589204 MS.gene79879:intron 55.0%
CTCGCAGGTGTCAATTTGGG+CGG + chr3.1:65589270-65589289 MS.gene79879:intron 55.0%
GCACAAGTCTTGAGGCCTGT+TGG + chr3.1:65586612-65586631 MS.gene79879:CDS 55.0%
GCCGTGGCATGGTGAAAAGT+AGG + chr3.1:65588747-65588766 MS.gene79879:intron 55.0%
GTCTACTAATTCCTCGGGCG+CGG - chr3.1:65586034-65586053 None:intergenic 55.0%
TAGTTTATCTACCGCGCCCG+AGG + chr3.1:65586020-65586039 MS.gene79879:CDS 55.0%
TCAGCTTTCGAGCTCTTGGC+CGG + chr3.1:65587205-65587224 MS.gene79879:CDS 55.0%
TCGCAGGTGTCAATTTGGGC+GGG + chr3.1:65589271-65589290 MS.gene79879:intron 55.0%
TGATGTGTTGCGCCGTACAG+TGG + chr3.1:65586470-65586489 MS.gene79879:CDS 55.0%
TGGATTCAGGAGTCGGGTCT+TGG - chr3.1:65591963-65591982 None:intergenic 55.0%
! GACCATAACTTGCCTCGGAG+CGG - chr3.1:65587258-65587277 None:intergenic 55.0%
! GGTTCAGGTTCGATTCTCGC+AGG + chr3.1:65589255-65589274 MS.gene79879:intron 55.0%
!! CAGGCATTTTCATGGGCTGC+TGG + chr3.1:65591820-65591839 MS.gene79879:CDS 55.0%
!! CTGATATTCGACGGGCTGCT+CGG + chr3.1:65587546-65587565 MS.gene79879:CDS 55.0%
!! TGGCCTGTTGGTGTTGGCTT+GGG + chr3.1:65589209-65589228 MS.gene79879:intron 55.0%
!! TTGGCCTGTTGGTGTTGGCT+TGG + chr3.1:65589208-65589227 MS.gene79879:intron 55.0%
!! TTGGGTTGGCCTGTTGGTGT+TGG + chr3.1:65589203-65589222 MS.gene79879:intron 55.0%
!! TTGGTGTTGGCTTGGGACCT+TGG + chr3.1:65589216-65589235 MS.gene79879:intron 55.0%
!!! TCTTTTTTTTGGGGGGGGGG+GGG + chr3.1:65589811-65589830 MS.gene79879:intron 55.0%
AGCTTTCGAGCTCTTGGCCG+GGG + chr3.1:65587207-65587226 MS.gene79879:CDS 60.0%
AGGGTTGAAGAGCCGTGGCA+TGG + chr3.1:65588736-65588755 MS.gene79879:intron 60.0%
CACCAACAGGCCAACCCAAG+TGG - chr3.1:65589202-65589221 None:intergenic 60.0%
CAGCTTTCGAGCTCTTGGCC+GGG + chr3.1:65587206-65587225 MS.gene79879:CDS 60.0%
CGAGCAGCCCGTCGAATATC+AGG - chr3.1:65587548-65587567 None:intergenic 60.0%
GGGACAAAGTCTCACGACCC+CGG - chr3.1:65590585-65590604 None:intergenic 60.0%
GGTCCCAAGCCAACACCAAC+AGG - chr3.1:65589215-65589234 None:intergenic 60.0%
GTCCGCTCCGAGGCAAGTTA+TGG + chr3.1:65587253-65587272 MS.gene79879:intron 60.0%
TGGCAGCAGCCTGTAGTACC+CGG - chr3.1:65591906-65591925 None:intergenic 60.0%
! CACCAGCAAAGCGCCTGGTT+TGG + chr3.1:65586443-65586462 MS.gene79879:CDS 60.0%
!! ACCCACTTGGGTTGGCCTGT+TGG + chr3.1:65589197-65589216 MS.gene79879:intron 60.0%
!!! CTTTTTTTTGGGGGGGGGGG+GGG + chr3.1:65589812-65589831 MS.gene79879:intron 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG + chr3.1:65589813-65589832 MS.gene79879:intron 60.0%
! GGAGTCACCAGCAAAGCGCC+TGG + chr3.1:65586438-65586457 MS.gene79879:CDS 65.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG + chr3.1:65589814-65589833 MS.gene79879:intron 65.0%
!!! TTTTTTGGGGGGGGGGGGGG+GGG + chr3.1:65589815-65589834 MS.gene79879:intron 70.0%
!! TTTTTGGGGGGGGGGGGGGG+GGG + chr3.1:65589816-65589835 MS.gene79879:intron 75.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG + chr3.1:65589817-65589836 MS.gene79879:intron 80.0%
! TTTGGGGGGGGGGGGGGGGG+GGG + chr3.1:65589818-65589837 MS.gene79879:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr3.1:65589819-65589838 MS.gene79879:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr3.1:65589820-65589839 MS.gene79879:intron 95.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 65585677 65591999 65585677 ID=MS.gene79879
chr3.1 mRNA 65585677 65591999 65585677 ID=MS.gene79879.t1;Parent=MS.gene79879
chr3.1 exon 65585677 65585730 65585677 ID=MS.gene79879.t1.exon1;Parent=MS.gene79879.t1
chr3.1 CDS 65585677 65585730 65585677 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65585826 65586650 65585826 ID=MS.gene79879.t1.exon2;Parent=MS.gene79879.t1
chr3.1 CDS 65585826 65586650 65585826 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65586944 65587044 65586944 ID=MS.gene79879.t1.exon3;Parent=MS.gene79879.t1
chr3.1 CDS 65586944 65587044 65586944 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65587150 65587264 65587150 ID=MS.gene79879.t1.exon4;Parent=MS.gene79879.t1
chr3.1 CDS 65587150 65587264 65587150 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65587521 65587598 65587521 ID=MS.gene79879.t1.exon5;Parent=MS.gene79879.t1
chr3.1 CDS 65587521 65587598 65587521 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65587764 65587856 65587764 ID=MS.gene79879.t1.exon6;Parent=MS.gene79879.t1
chr3.1 CDS 65587764 65587856 65587764 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65588358 65588441 65588358 ID=MS.gene79879.t1.exon7;Parent=MS.gene79879.t1
chr3.1 CDS 65588358 65588441 65588358 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65589408 65589506 65589408 ID=MS.gene79879.t1.exon8;Parent=MS.gene79879.t1
chr3.1 CDS 65589408 65589506 65589408 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65590023 65590085 65590023 ID=MS.gene79879.t1.exon9;Parent=MS.gene79879.t1
chr3.1 CDS 65590023 65590085 65590023 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65590466 65590496 65590466 ID=MS.gene79879.t1.exon10;Parent=MS.gene79879.t1
chr3.1 CDS 65590466 65590496 65590466 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65590890 65590936 65590890 ID=MS.gene79879.t1.exon11;Parent=MS.gene79879.t1
chr3.1 CDS 65590890 65590936 65590890 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65591140 65591198 65591140 ID=MS.gene79879.t1.exon12;Parent=MS.gene79879.t1
chr3.1 CDS 65591140 65591198 65591140 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
chr3.1 exon 65591786 65591999 65591786 ID=MS.gene79879.t1.exon13;Parent=MS.gene79879.t1
chr3.1 CDS 65591786 65591999 65591786 ID=cds.MS.gene79879.t1;Parent=MS.gene79879.t1
Gene Sequence

>MS.gene79879

ATGAAAATGTTGCCTTTTTGCTCAGCCACACCGTGTTATTCCCCTTCTTCTCAGGTCTATTTCTATCCATTCAACTTTTATCATGTTTATCACTATTTGAAACTCGGTAGGACCAATCACTTATAACAGTTAATCTTTTGTTATTGCAGATTCCCTTATTTGGGGGACTTCAATCTCTATGTCCAATTCGAAAGGATTTTGAGAGTAGAGGCGTGGTAGAAGAAAATGTACATTTAGGTTTGCATTATGGAACACCCTCACTCAGAACTTCATTTACAACACAAGCTATAAACACTGTCTCAGTTTGGGAAAATTCACCACTTAGTGCTGGAGAATTCAGATATAGTTTATCTACCGCGCCCGAGGAATTAGTAGACTTTGCAAAACAATCAACTGAAGGGTCTGATGCATTAGTAGCACCTGCTGTGCAACCAGAAGCAATATTATCAAGTACTGATACAACGTCGGGGAAGTTTGAATCTGTGTCGAATTTGGTTGAAGGGGGTAATGAATCATTAGCAGCAACTAAAGCAAGTGCCACTGAAGTTTTTGCTGGAATCAATGAGACATTCAGCGACTCAATTAATAAGGGAGAAAATGCTCTTCGAAGCTCAGTGGATTCGGCAACTTCTTTTATTGATTCCGTTGTTAAAAATGCTACTACGTCTGCAGATAATGCTTTTAGTAAGGTGTTTTCTGCTGCTGATCAAACGGGGGAGTTAGCGAATAAGAAAATTACTAGCTTTTCAAGTGAAATAGATGGAGTCACCAGCAAAGCGCCTGGTTTGGTTATTGATGTGTTGCGCCGTACAGTGGTTGCAGTTGAGAGTTCTCTGTCAAGTGGGGCTTCTTATGTTGTTTACCTATATGGGTCGGCGAAGGAGTTTCTTCCTGCAGAGATCAGGGATACAGTCAATATATATGAAGATAAAGCAGCACAAGTCTTGAGGCCTGTTGGGTCTGCAACTCAACAGGTAACATATTCATAGAGATTCAACAGGATTCTAAGTCTTAGCTTCCCTAAAAAATTTCATTTTGTTTAATGTCGTGAAGTTTGATTTGAATTGTCAAATGAGTCAAAACGTCTTATATATGGACGACTCTTCTTCAGCTCTAGCATAAGAAGTTCGTTGCTTTAATTCATGCTTGAAATTGTGCGTTCTTGTTCTTAATATATGCTGTTTCATTTCACAAACATTATGAATTTGCCAGCAATTTTCTAGCCTGTTCACAAATCGTATGTTGATAATTTATGTCTAATAAGCAGATATACATGGCTTTCTATTCACTGGAGAAGAGTCTTGGCTTGGATCCAAATGACCCAATTATTCCATTTGTTGTTTTTGTGGGCTCTTCAGCAACATTATGGTATGAAATTATCTTTCCTCAAAAGTAAAATTTGTTATAAATCTACATTGAAGAATTAGATTTTCATCACAAACACCATCTATAATAGATGTCAGATATATGCAGGACTATTTATTGGTTGTGGAAATATGGAGGTTACTCGGGAGATTTATCCCCTAAATCAGCTTTCGAGCTCTTGGCCGGGGACTCAAATGCTGTACTTATAGATGTCCGCTCCGAGGCAAGTTATGGTCAATTTTTGAGGCATTTTTAATTCAAAGCGGGAGAAACAGTCATACATTTTATGAAAGCAAAGTCAGGATATCTTGTGTTTTGAATCTTTTGATGCCCATTCTATGTTTGTTCCACTCTTTTTCTAATCTCAAACTATGATACTTTGGTGGAATGGAAGTTTTCCTATCTGTTTGCATTTGTTTGGCCAACTATTTTCATATCAATGTTGATCAATGAAGTTGCTGCTCCTTTCCTTTATGCAGGACTTGCGAGAAAAAGATGGTATTCCTGATATTCGACGGGCTGCTCGGTTTCGCTATGCGAGTGTAACTCCAATTGAGGTTGGTTTAAAACATGATGATATTTAAAAATTGTGGCGAGTATATTTATGGAATGCCTTACCTATGTGAAATGGAACAGGTCCAGAATCTTGGTCATTTATTCTATGGATAAGTAATTAATTTGTTATCTAGCACTACTAAAATAACATATCATGTCCATTTCAGGTTGATGGCTCCATACGCAAGTTGTTGAAGGGTGGTAGAGACCTAGATGACTCCTTGATCGCTGCTATTATTCAAAATTTGAAAATTGTTAAGGTATTTTGCCTTGCATCTCGAAACAGGGTCTATTGTTCTGAATAAAGTTAGTTGGAAGTGTATGGAATAACCCCTAGACGCTTGGCAAAATTTTCTTCCATATGAAACTCTCGGATATCAATGTTTTATACACAACCTTCAGTTTCATTCTTTTTACTTTGATATTATAACAATAGGCAATTGAACGTCAAAAGATATCTGTGTGTTAAAGTTAGGTTGTTTTTATAAAACATGTAGTCTTTTTGTAGTTTCGTCATTTTATGTTTATTTTTTGGAGGACATTAGATGGAGTTATATAGTGACTGTGTACTTTGTACCCTGCATGATAGGTGTAGGTCTGTTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATATATATATATATATTCAACGACTAGAAGTTCGCCTAAGAATACCTTTTTATTTTCACCTAATAATCTATCAGAAACTTAATTTATGTGGTCTATAGGACAGTTCCAAGGTTATTGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAAGAAAATTGGGGTTAAGGTAAGTCTGTCAATAACTGCTGAGATACTTGCTGCAAATCTTTAATGTGTTGGCGATATATAACATAAATTTACTGCTGCAATCCATTATGTAAATTATCTAACCTGCCATCTGTCCTACTATTTATTCGTTCATCTAAATTCCTTCCAAACCTTATTTTGTTGCTGAAGCCTGTGCCTAACAGAATGTATAGCTTTGTGGTAGGAGATTTGGTATCTAGATAACAAATAACAGTTTTTCCTGCTTCTATATCTGATATAGGATCATTGAAACTTGTAATTGTATTTCAAGGTTAGGGTTGAAGAGCCGTGGCATGGTGAAAAGTAGGATAATCTATTAATAATAGAGAAAAATTCTGGATTATTCTATATAACTCAAATCTTTGTTAGTGTCTGCATGATTTCCTACAAAGAAGTATCTCTATCATATTATCTAATAGTATTGCGCATGTTCACCTCAGTTATGAGTGTAAACTGAACTCATGCACAAATGCTAATACATGGTGAGTTGCAGTACATAACAGCCCATCACTAGATGAGACACTCTGATGGTTTAGATTTGAAATTGTAAATGAAAAAGGCAAAAACTAGAATTTATGAATTTTAGATTCCCTAACTCATATATGTTCAAACTAAACACTTAGTCCTTTACTGTCAACATAAATGCTAATCAGATTTGTTTTCAAACTTGGGGACAGTTCCTTTAAACCATAGTATGTGCTTTAGTGGTGATTCACTAATAGACGCCCTATACTGACCCACTTGGGTTGGCCTGTTGGTGTTGGCTTGGGACCTTGGAGTGTGCTTCTCTCAAGGTTCAGGTTCGATTCTCGCAGGTGTCAATTTGGGCGGGCTAGTTTGGCTTATTAAAAAAAAAAACTAATAGACGCCCTATGCACAATCAACTTATTCATCATTCATTGAAATCCGATCCATATATGTAACTAGTCATGTTGATATTTTACAGAATCCGTACTTGGTCGAAGGTGGCTTTCAGTCTTGGGTAAAACAAAGTCTCCGCATCAAGGAACTCAAACCTGAAACAGCACTTACCATACTCAATGAGGTATTTGTCAAACTATTTTTGCTCATACATATTGTTATGGATATGAATTTCACTAGGCACTAGCATACATAACCAAAAATAATAGGATGAAAGCTCGGTTCTGTAATACTAACAATTTAGGATGAATCCTCTTCTTACCCAGCCTACTGTTTTAGCTAATCACCTAATCAATTCTTTATTTTTAATGCATGCAAAAGATATTAAGGATAACCTAATTTGACTAAGGGTCCTTCTGTTTTTTTATACAAAAGCCAATTTTTATTCAAAAGATATGTTTTATAAAACTTGTAGTAGCTAATAAGTTTCTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATTCTCATGAAAAGCTATTTCAATGCTTTTCTTAGAGGTTCAAATTAGCAGCTTCAGAAAAAAAATGGCTCTAAAAAAAGTTGCATTGTGGGATCACTTTTTTTAAAGCTTAAGAAAATAAATATATGTTGGTCTTTTCATCAGTGCATATGCATTTTTGTATGTTCACAGGAAGCTGAAGCAATTCTAGAGGATATTAGACCTTCTCCTTGGCAATTTTTAGGTTTTGGTACGGTAAGTGTCAACTTCGTAATTTTTACAACCAGTCAGTTATTTGTCATTTTTGTTGGATTCTCTGTATGCTTATCGTTAAGTTAATTTAATGAGGTTCACGTTATTTCATAACAAAGTATGGAGAATACCTCAATACAGTAGAAAACAGGTTTTTAGTCAAGCAACTTATATTGAGAAAAATAAAATAGAAAAATGGAATTGATAGCACTTTCTATCTATTTAATTTATCCTATCTTCAACAATTTTCTTTCGTAAATATGACGTTTTCTTCCTTGATACCACGAAAGCATCCTTGTCATATTTTGATTTGATAAGAAATGCTTACATGATTTTATTTGATTGTTATTATCTGCTAATAAATGCAACTACTTTTTATTCAGGCACTACTTGCGGGGTCATATGCATTAGTAGGTATGTGCATGTTCTTTCCCATAAACTAAGAATTTATTCAGAATTGAATTTTTTTGGACTACATCTAAAGAGTGTAGCAGTTAGTCCGGGGTCGTGAGACTTTGTCCCTTTAGTATGTTCCTCTGCAAGCATATAACTAACTACAAATGCCAGTTTATATGTGAAGTTGGCTAGTTTACTTCTCACAAATGTTTTAAGAGCTTATATCGTGTTTGAAATTTTATTTTGATTCTGTAGCTTAAATGAAAGTTCTAATTCCTTGTAACATCATGCACAAGTGACTGGAAGTCTTCAAATTTTTTATAGTGAAAACCTGGTTTCCCCCACTTTATTGTTAACCATTCGTTTATTTGATTGTCCTGATCTGACAAAGCGCAATCATTATTGTTGCAGAGTGGGAGAAAACATTGCAGTTAATTGGTGTATTTGGCCTCAGTCTGGTATGTATATTTTCCATTCGGCAAGTGCTTCAATTAAATACTGTTTCTTTAAAAGAATATGGTTCATATATCAACTAATGTTGGGAATAGCATAACGGGCCCATAATTTTATCTACTGGGAAATTCTCATATTTATCCAGTTTTAAGGTCAGTAACATTGGAGATTTTTCATTTCCTTATATTTTTTGAATGTGCATCACCAGACCATATATCTGCGGGTTTCTTCGTATGAAAGGTCAGAAGATTTGAACCAAGATGTGAGGTGAGTATACTTCATGATGGATATTTGGTCATATAGTCATCAAATTAGACAATGTTTGAATAATTTAATTATCATCCCATAGTCATGTATGTATTCAGTCATCTTAATATAAGTCATGGTAGATGTACACAAGCTTTTCATTTCTATGTTGTGAACTATTGGCTATATAGCAGTATGGATTGTGTTCATTAAATTTGTCATTGCATATACATAAAAGTCAGCATTTCAAACGTGTAAAAGGATCAGAAATTGTGTTTGTGTGCCTCGATAGACAGATATGAGCAAACATAAAGAGTGTCGCCCAAATCCACATGCAGTTTCCATTTTAGACTTCATGTAGCTAAACGAACTATTTTTTCCCTAATACAAGATAAACTAACTCTTAAGGCATAACTTTTGTTATCTTGTATTTTCTTCTTGAGTGTTACAAATATTGTAACATATCAACACCTAGAAAAACACATGTTTTCAATTAGCAAATAGCAACTAGTGAACTAACACTACCAGCTTGTGTACCCTATCTTGGCATTTTTACTCTAGCATCTGTAATGAAATTTAACTTGTTTGTCTTCTTCTGTCCTGTAAAGGTTTTTGTTGCTTGCTCCTGTTAAAATTGGAGGTCAGGCATTTTCATGGGCTGCTGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCATTGGATGTTCAGAACCGGGTACTACAGGCTGCTGCCAAACATGAATCCCAACCATCTGATAGTGAAGGGAGCCAAGACCCGACTCCTGAATCCACAGTTTCTCTCAATTAA

Protein sequence

>MS.gene79879.t1

MKMLPFCSATPCYSPSSQIPLFGGLQSLCPIRKDFESRGVVEENVHLGLHYGTPSLRTSFTTQAINTVSVWENSPLSAGEFRYSLSTAPEELVDFAKQSTEGSDALVAPAVQPEAILSSTDTTSGKFESVSNLVEGGNESLAATKASATEVFAGINETFSDSINKGENALRSSVDSATSFIDSVVKNATTSADNAFSKVFSAADQTGELANKKITSFSSEIDGVTSKAPGLVIDVLRRTVVAVESSLSSGASYVVYLYGSAKEFLPAEIRDTVNIYEDKAAQVLRPVGSATQQIYMAFYSLEKSLGLDPNDPIIPFVVFVGSSATLWTIYWLWKYGGYSGDLSPKSAFELLAGDSNAVLIDVRSEDLREKDGIPDIRRAARFRYASVTPIEVDGSIRKLLKGGRDLDDSLIAAIIQNLKIVKDSSKVIVLDADGTRSKGIARSLKKIGVKNPYLVEGGFQSWVKQSLRIKELKPETALTILNEEAEAILEDIRPSPWQFLGFGTALLAGSYALVEWEKTLQLIGVFGLSLTIYLRVSSYERSEDLNQDVRFLLLAPVKIGGQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGSQDPTPESTVSLN