AlfalfaGEDB | MS.gene59840

M. sativa cultivar XinJiangDaYe / MS.gene59840

KEGG: -
GO: GO:0006950 GO:0006952 GO:0008150 GO:0050896
PFAM: PF00407.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59840.t1	XP_003628192.1	92.3	155	11	1	1	155	1	154	8.50E-80	306.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59840.t1	Q9SSK5	36.7	150	92	3	3	150	7	155	9.1e-22	104.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59840.t1	G7L7S7	92.3	155	11	1	1	155	1	154	6.2e-80	306.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049159	MS.gene59840	0.802592	5.21E-49	-1.69E-46
MS.gene049254	MS.gene59840	0.800931	1.14E-48	-1.69E-46
MS.gene049404	MS.gene59840	0.802201	6.28E-49	-1.69E-46
MS.gene049435	MS.gene59840	0.816471	5.44E-52	-1.69E-46
MS.gene049501	MS.gene59840	0.81947	1.14E-52	-1.69E-46
MS.gene049850	MS.gene59840	0.821091	4.86E-53	-1.69E-46
MS.gene050020	MS.gene59840	0.80062	1.32E-48	-1.69E-46
MS.gene050021	MS.gene59840	0.816333	5.84E-52	-1.69E-46
MS.gene050026	MS.gene59840	0.804872	1.75E-49	-1.69E-46
MS.gene050137	MS.gene59840	0.848576	5.61E-60	-1.69E-46
MS.gene050156	MS.gene59840	0.839153	1.88E-57	-1.69E-46
MS.gene05016	MS.gene59840	0.812853	3.44E-51	-1.69E-46
MS.gene050226	MS.gene59840	0.812122	4.97E-51	-1.69E-46
MS.gene050227	MS.gene59840	0.813353	2.67E-51	-1.69E-46
MS.gene050228	MS.gene59840	0.811881	5.61E-51	-1.69E-46
MS.gene050355	MS.gene59840	0.800669	1.29E-48	-1.69E-46
MS.gene050442	MS.gene59840	0.82434	8.51E-54	-1.69E-46
MS.gene050680	MS.gene59840	0.82639	2.79E-54	-1.69E-46
MS.gene050750	MS.gene59840	0.80799	3.86E-50	-1.69E-46
MS.gene050780	MS.gene59840	0.804534	2.06E-49	-1.69E-46
MS.gene050787	MS.gene59840	0.840043	1.10E-57	-1.69E-46
MS.gene050807	MS.gene59840	0.820582	6.36E-53	-1.69E-46
MS.gene050826	MS.gene59840	0.80621	9.19E-50	-1.69E-46
MS.gene050844	MS.gene59840	0.83167	1.46E-55	-1.69E-46
MS.gene050953	MS.gene59840	0.802515	5.41E-49	-1.69E-46
MS.gene050959	MS.gene59840	0.808286	3.34E-50	-1.69E-46
MS.gene051190	MS.gene59840	0.805481	1.31E-49	-1.69E-46
MS.gene051247	MS.gene59840	0.814894	1.22E-51	-1.69E-46
MS.gene051265	MS.gene59840	0.838416	2.91E-57	-1.69E-46
MS.gene05132	MS.gene59840	0.80575	1.15E-49	-1.69E-46
MS.gene051594	MS.gene59840	0.809322	2.00E-50	-1.69E-46
MS.gene051719	MS.gene59840	0.825232	5.25E-54	-1.69E-46
MS.gene051720	MS.gene59840	0.819577	1.08E-52	-1.69E-46
MS.gene051800	MS.gene59840	0.808616	2.84E-50	-1.69E-46
MS.gene052020	MS.gene59840	0.811026	8.60E-51	-1.69E-46
MS.gene052042	MS.gene59840	0.804834	1.79E-49	-1.69E-46
MS.gene052190	MS.gene59840	0.850179	2.01E-60	-1.69E-46
MS.gene052323	MS.gene59840	0.811019	8.63E-51	-1.69E-46
MS.gene052333	MS.gene59840	0.850488	1.64E-60	-1.69E-46
MS.gene052488	MS.gene59840	0.814862	1.24E-51	-1.69E-46
MS.gene052519	MS.gene59840	0.815318	9.83E-52	-1.69E-46
MS.gene052584	MS.gene59840	0.805395	1.36E-49	-1.69E-46
MS.gene052611	MS.gene59840	0.832322	1.01E-55	-1.69E-46
MS.gene052613	MS.gene59840	0.805407	1.35E-49	-1.69E-46
MS.gene052773	MS.gene59840	0.80955	1.79E-50	-1.69E-46
MS.gene052863	MS.gene59840	0.824086	9.76E-54	-1.69E-46
MS.gene052867	MS.gene59840	0.81212	4.97E-51	-1.69E-46
MS.gene053054	MS.gene59840	-0.805684	1.19E-49	-1.69E-46
MS.gene053147	MS.gene59840	0.826609	2.47E-54	-1.69E-46
MS.gene053166	MS.gene59840	0.852371	4.82E-61	-1.69E-46
MS.gene053201	MS.gene59840	0.809833	1.56E-50	-1.69E-46
MS.gene053221	MS.gene59840	0.819432	1.17E-52	-1.69E-46
MS.gene053226	MS.gene59840	0.825963	3.52E-54	-1.69E-46
MS.gene053331	MS.gene59840	0.815157	1.07E-51	-1.69E-46
MS.gene053584	MS.gene59840	0.802066	6.69E-49	-1.69E-46
MS.gene053966	MS.gene59840	0.816008	6.90E-52	-1.69E-46
MS.gene053974	MS.gene59840	0.801011	1.10E-48	-1.69E-46
MS.gene053998	MS.gene59840	0.810513	1.11E-50	-1.69E-46
MS.gene05414	MS.gene59840	0.810696	1.01E-50	-1.69E-46
MS.gene05415	MS.gene59840	0.832431	9.49E-56	-1.69E-46
MS.gene054236	MS.gene59840	0.810368	1.19E-50	-1.69E-46
MS.gene054291	MS.gene59840	-0.84105	6.01E-58	-1.69E-46
MS.gene054467	MS.gene59840	0.872602	2.80E-67	-1.69E-46
MS.gene054468	MS.gene59840	0.859189	4.91E-63	-1.69E-46
MS.gene054472	MS.gene59840	0.807723	4.40E-50	-1.69E-46
MS.gene054559	MS.gene59840	0.828149	1.06E-54	-1.69E-46
MS.gene054581	MS.gene59840	0.82335	1.45E-53	-1.69E-46
MS.gene054610	MS.gene59840	0.808688	2.74E-50	-1.69E-46
MS.gene05468	MS.gene59840	0.818349	2.05E-52	-1.69E-46
MS.gene054775	MS.gene59840	0.817596	3.04E-52	-1.69E-46
MS.gene055166	MS.gene59840	0.800501	1.40E-48	-1.69E-46
MS.gene055227	MS.gene59840	0.836767	7.72E-57	-1.69E-46
MS.gene055356	MS.gene59840	0.87659	1.24E-68	-1.69E-46
MS.gene055357	MS.gene59840	0.853135	2.92E-61	-1.69E-46
MS.gene055358	MS.gene59840	0.880701	4.42E-70	-1.69E-46
MS.gene055466	MS.gene59840	0.819507	1.12E-52	-1.69E-46
MS.gene055507	MS.gene59840	0.809916	1.49E-50	-1.69E-46
MS.gene055804	MS.gene59840	0.807527	4.84E-50	-1.69E-46
MS.gene055818	MS.gene59840	0.847711	9.73E-60	-1.69E-46
MS.gene055926	MS.gene59840	0.816127	6.49E-52	-1.69E-46
MS.gene05604	MS.gene59840	0.855768	5.05E-62	-1.69E-46
MS.gene056050	MS.gene59840	0.811009	8.67E-51	-1.69E-46
MS.gene056173	MS.gene59840	0.829562	4.80E-55	-1.69E-46
MS.gene056366	MS.gene59840	0.804663	1.94E-49	-1.69E-46
MS.gene056506	MS.gene59840	0.806413	8.33E-50	-1.69E-46
MS.gene056553	MS.gene59840	0.824807	6.61E-54	-1.69E-46
MS.gene056595	MS.gene59840	0.806017	1.01E-49	-1.69E-46
MS.gene056643	MS.gene59840	0.81071	1.01E-50	-1.69E-46
MS.gene057026	MS.gene59840	0.845238	4.60E-59	-1.69E-46
MS.gene057060	MS.gene59840	0.831445	1.66E-55	-1.69E-46
MS.gene057314	MS.gene59840	0.805159	1.53E-49	-1.69E-46
MS.gene057444	MS.gene59840	0.821238	4.49E-53	-1.69E-46
MS.gene057915	MS.gene59840	0.831892	1.29E-55	-1.69E-46
MS.gene058625	MS.gene59840	0.837501	5.01E-57	-1.69E-46
MS.gene058829	MS.gene59840	0.83887	2.22E-57	-1.69E-46
MS.gene058979	MS.gene59840	0.820333	7.25E-53	-1.69E-46
MS.gene059128	MS.gene59840	0.831994	1.22E-55	-1.69E-46
MS.gene059161	MS.gene59840	0.808185	3.51E-50	-1.69E-46
MS.gene059272	MS.gene59840	0.814129	1.80E-51	-1.69E-46
MS.gene059382	MS.gene59840	0.800183	1.62E-48	-1.69E-46
MS.gene059584	MS.gene59840	0.81502	1.15E-51	-1.69E-46
MS.gene059607	MS.gene59840	0.83127	1.84E-55	-1.69E-46
MS.gene059789	MS.gene59840	0.801411	9.12E-49	-1.69E-46
MS.gene060137	MS.gene59840	-0.817151	3.83E-52	-1.69E-46
MS.gene060167	MS.gene59840	0.80043	1.45E-48	-1.69E-46
MS.gene060312	MS.gene59840	0.815934	7.17E-52	-1.69E-46
MS.gene060322	MS.gene59840	0.853151	2.89E-61	-1.69E-46
MS.gene06052	MS.gene59840	0.804559	2.04E-49	-1.69E-46
MS.gene060572	MS.gene59840	0.804986	1.66E-49	-1.69E-46
MS.gene060781	MS.gene59840	0.853581	2.17E-61	-1.69E-46
MS.gene060803	MS.gene59840	0.811764	5.95E-51	-1.69E-46
MS.gene060998	MS.gene59840	0.806792	6.93E-50	-1.69E-46
MS.gene061114	MS.gene59840	-0.811159	8.05E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene59841	MS.gene59840	PPI
MS.gene058383	MS.gene59840	PPI
MS.gene77770	MS.gene59840	PPI
MS.gene016307	MS.gene59840	PPI
MS.gene59840	MS.gene77781	PPI
MS.gene058384	MS.gene59840	PPI
MS.gene74355	MS.gene59840	PPI
MS.gene058386	MS.gene59840	PPI
MS.gene016317	MS.gene59840	PPI
MS.gene74343	MS.gene59840	PPI
MS.gene77774	MS.gene59840	PPI
MS.gene77761	MS.gene59840	PPI
MS.gene77763	MS.gene59840	PPI
MS.gene59857	MS.gene59840	PPI
MS.gene74364	MS.gene59840	PPI
MS.gene016327	MS.gene59840	PPI
MS.gene74352	MS.gene59840	PPI
MS.gene74342	MS.gene59840	PPI
MS.gene74367	MS.gene59840	PPI
MS.gene59849	MS.gene59840	PPI
MS.gene59862	MS.gene59840	PPI
MS.gene74358	MS.gene59840	PPI
MS.gene74344	MS.gene59840	PPI
MS.gene066940	MS.gene59840	PPI
MS.gene016315	MS.gene59840	PPI
MS.gene016326	MS.gene59840	PPI
MS.gene59840	MS.gene59859	PPI
MS.gene77781	MS.gene59840	PPI
MS.gene77769	MS.gene59840	PPI
MS.gene016337	MS.gene59840	PPI
MS.gene83129	MS.gene59840	PPI
MS.gene59140	MS.gene59840	PPI
MS.gene74353	MS.gene59840	PPI
MS.gene77771	MS.gene59840	PPI
MS.gene59869	MS.gene59840	PPI
MS.gene016336	MS.gene59840	PPI
MS.gene74354	MS.gene59840	PPI
MS.gene016314	MS.gene59840	PPI
MS.gene016330	MS.gene59840	PPI
MS.gene77758	MS.gene59840	PPI
MS.gene99548	MS.gene59840	PPI
MS.gene59860	MS.gene59840	PPI
MS.gene59859	MS.gene59840	PPI
MS.gene026605	MS.gene59840	PPI
MS.gene74341	MS.gene59840	PPI
MS.gene62988	MS.gene59840	PPI
MS.gene058382	MS.gene59840	PPI
MS.gene77780	MS.gene59840	PPI
MS.gene59840	MS.gene016317	PPI
MS.gene74365	MS.gene59840	PPI
MS.gene59847	MS.gene59840	PPI
MS.gene77768	MS.gene59840	PPI
MS.gene74346	MS.gene59840	PPI
MS.gene59863	MS.gene59840	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59840.t1	MTR_8g045400	92.258	155	11	1	1	155	1	154	2.34e-104	295
MS.gene59840.t1	MTR_8g045490	78.289	152	33	0	1	152	1	152	2.06e-90	260
MS.gene59840.t1	MTR_8g045520	79.355	155	32	0	1	155	1	155	4.03e-90	259
MS.gene59840.t1	MTR_8g045695	74.839	155	38	1	1	155	1	154	2.11e-85	247
MS.gene59840.t1	MTR_8g045735	72.258	155	42	1	1	155	1	154	8.98e-82	238
MS.gene59840.t1	MTR_8g045570	71.053	152	44	0	1	152	1	152	1.91e-81	237
MS.gene59840.t1	MTR_8g045640	74.194	155	39	1	1	155	1	154	2.49e-81	237
MS.gene59840.t1	MTR_8g045665	72.903	155	41	1	1	155	1	154	3.34e-81	236
MS.gene59840.t1	MTR_8g045560	72.903	155	41	1	1	155	1	154	1.53e-80	235
MS.gene59840.t1	MTR_8g045300	69.677	155	47	0	1	155	1	155	7.28e-80	233
MS.gene59840.t1	MTR_8g045555	70.395	152	45	0	1	152	1	152	8.28e-80	233
MS.gene59840.t1	MTR_1g030820	38.562	153	91	2	1	151	1	152	3.49e-38	127
MS.gene59840.t1	MTR_1g030810	38.562	153	91	2	1	151	1	152	2.73e-37	125
MS.gene59840.t1	MTR_1g030840	36.943	157	89	5	1	149	1	155	3.98e-29	105
MS.gene59840.t1	MTR_8g012550	34.483	145	92	3	6	149	8	150	1.20e-26	98.6
MS.gene59840.t1	MTR_1g031640	37.162	148	84	5	7	152	7	147	3.26e-24	92.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene59840.t1	AT5G28010	35.333	150	94	3	3	150	15	163	1.21e-27	101
MS.gene59840.t1	AT5G28010	35.333	150	94	3	3	150	15	163	1.21e-27	101
MS.gene59840.t1	AT1G70890	37.333	150	91	3	3	150	7	155	2.56e-26	97.8
MS.gene59840.t1	AT1G70840	35.333	150	94	3	3	150	20	168	6.13e-26	97.1
MS.gene59840.t1	AT1G70830	36.667	150	92	3	3	150	22	170	1.45e-25	96.3
MS.gene59840.t1	AT1G70830	36.667	150	92	3	3	150	22	170	2.63e-25	96.3
MS.gene59840.t1	AT1G70830	36.667	150	92	3	3	150	22	170	1.13e-24	95.9
MS.gene59840.t1	AT1G70830	36.667	150	92	3	3	150	22	170	3.18e-24	96.3
MS.gene59840.t1	AT1G70830	35.333	150	94	3	3	150	184	332	1.03e-22	92.0
MS.gene59840.t1	AT5G28000	34.000	150	96	3	3	150	13	161	3.39e-24	92.4
MS.gene59840.t1	AT1G70850	34.667	150	95	3	3	150	9	157	2.87e-23	91.7
MS.gene59840.t1	AT1G70830	35.333	150	94	3	3	150	137	285	3.12e-23	92.8
MS.gene59840.t1	AT1G70830	33.333	93	61	1	59	150	31	123	6.13e-13	65.1
MS.gene59840.t1	AT1G70850	34.667	150	95	3	3	150	9	157	1.03e-22	92.0
MS.gene59840.t1	AT1G70850	35.714	140	87	3	13	150	175	313	1.51e-21	88.6
MS.gene59840.t1	AT1G70850	34.667	150	95	3	3	150	9	157	1.03e-22	92.0
MS.gene59840.t1	AT1G70850	35.714	140	87	3	13	150	175	313	1.51e-21	88.6
MS.gene59840.t1	AT1G23130	28.859	149	104	2	3	150	10	157	1.48e-20	82.8
MS.gene59840.t1	AT1G23120	28.000	150	103	3	1	150	1	145	1.25e-19	80.1
MS.gene59840.t1	AT1G70870	40.625	96	56	1	56	151	44	138	1.30e-19	80.1
MS.gene59840.t1	AT1G70880	30.667	150	101	3	3	150	8	156	1.44e-19	80.5
MS.gene59840.t1	AT4G23670	32.680	153	100	3	1	152	1	151	1.45e-19	80.1
MS.gene59840.t1	AT1G23120	28.472	144	98	3	7	150	57	195	3.44e-19	80.5
MS.gene59840.t1	AT2G01520	29.412	153	105	3	1	152	1	151	1.23e-17	75.1
MS.gene59840.t1	AT1G14930	27.742	155	109	3	1	154	1	153	2.72e-17	74.3
MS.gene59840.t1	AT1G35260	28.767	146	100	3	7	150	6	149	1.08e-16	72.8
MS.gene59840.t1	AT2G01530	30.065	153	104	3	1	152	1	151	1.15e-16	72.8
MS.gene59840.t1	AT4G14060	29.412	153	105	3	1	152	1	151	1.88e-16	72.0
MS.gene59840.t1	AT4G23680	28.289	152	106	3	1	151	1	150	9.08e-16	70.1
MS.gene59840.t1	AT1G14940	27.097	155	110	3	1	154	1	153	1.08e-14	67.4
MS.gene59840.t1	AT1G30990	29.801	151	102	4	1	150	1	148	1.22e-14	67.4
MS.gene59840.t1	AT1G14950	27.742	155	109	3	1	154	1	153	1.89e-14	67.0
MS.gene59840.t1	AT3G26450	29.221	154	105	4	1	152	1	152	3.49e-14	66.2
MS.gene59840.t1	AT1G24020	29.677	155	107	2	1	154	1	154	4.30e-14	65.9
MS.gene59840.t1	AT1G24020	29.677	155	107	2	1	154	1	154	4.30e-14	65.9
MS.gene59840.t1	AT1G35310	25.899	139	100	3	13	150	12	148	1.23e-13	64.7
MS.gene59840.t1	AT1G14960	27.632	152	107	3	1	151	1	150	5.19e-12	60.5
MS.gene59840.t1	AT3G26460	29.487	156	102	5	1	152	1	152	1.08e-11	59.7

Find 28 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCTTCACCTTCATGAAGTT+TGG	0.292428	8.3:-54101922	None:intergenic
CATTCAGAAATGGTGCTTGC+TGG	0.350620	8.3:+54101792	None:intergenic
AATGGCTGGATGGACTTATT+AGG	0.352875	8.3:+54102957	MS.gene59840:CDS
AAAATAACTTTCAAGCTCTT+CGG	0.428417	8.3:+54102807	MS.gene59840:CDS
ATCATTGAAGTAATTGATAA+TGG	0.436398	8.3:+54102867	MS.gene59840:CDS
ATGGCAGTGGAGCTGCAAAA+TGG	0.452179	8.3:+54102892	MS.gene59840:CDS
AATAAGTCCATCCAGCCATT+TGG	0.456616	8.3:-54102954	None:intergenic
AACTTCATGAAGGTGAAGAT+TGG	0.494334	8.3:+54101925	MS.gene59840:CDS
AGACATTGATGAGCACTATA+AGG	0.495099	8.3:+54102833	MS.gene59840:CDS
AGTTTGAAGAACTTGTCAAC+GGG	0.511180	8.3:-54101846	None:intergenic
ATATTGACCCACCAAATGGC+TGG	0.520216	8.3:+54102943	MS.gene59840:CDS
GAGGATATTGACCCACCAAA+TGG	0.531703	8.3:+54102939	MS.gene59840:CDS
GGTAAACTTAGTACTGAACT+TGG	0.538495	8.3:+54101813	MS.gene59840:CDS
ATAACTTTCAAGCTCTTCGG+TGG	0.552870	8.3:+54102810	MS.gene59840:CDS
AAGTCCATCCAGCCATTTGG+TGG	0.553291	8.3:-54102951	None:intergenic
ATTGATAATGGTGATGGCAG+TGG	0.556824	8.3:+54102879	MS.gene59840:CDS
TGACCCACCAAATGGCTGGA+TGG	0.567137	8.3:+54102947	MS.gene59840:CDS
ATTGATCTTCTCATATTCAA+CGG	0.576809	8.3:-54102916	None:intergenic
GTTGATGCTCATCTTGTCAA+AGG	0.591021	8.3:+54102996	MS.gene59840:CDS
CATCATGCCAAACTTCATGA+AGG	0.593864	8.3:+54101915	MS.gene59840:CDS
TAGTTTGAAGAACTTGTCAA+CGG	0.601012	8.3:-54101847	None:intergenic
TGACATCACAATAGATGGCA+AGG	0.606404	8.3:+54102737	MS.gene59840:intron
GTAAACTTAGTACTGAACTT+GGG	0.614711	8.3:+54101814	MS.gene59840:CDS
GAAGTAATTGATAATGGTGA+TGG	0.618480	8.3:+54102873	MS.gene59840:CDS
ACACTGATTCAGTTAAACAC+TGG	0.620261	8.3:+54101952	MS.gene59840:CDS
AGTCCATCCAGCCATTTGGT+GGG	0.658787	8.3:-54102950	None:intergenic
AAACACTGGACTTATGTCGT+AGG	0.664039	8.3:+54101966	MS.gene59840:CDS
TGAATATGAGAAGATCAATG+AGG	0.699788	8.3:+54102920	MS.gene59840:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATACATTGTTTTAATTTAAT+TGG	+	chr8.3:54102701-54102720	MS.gene59840:intron	10.0%
!!	AGAATATATAGAATAAGTGA+TGG	+	chr8.3:54102328-54102347	MS.gene59840:intron	20.0%
!!	ATCATTGAAGTAATTGATAA+TGG	+	chr8.3:54102867-54102886	MS.gene59840:CDS	20.0%
!!	CATAATCTTCGTATAAAATA+TGG	-	chr8.3:54102116-54102135	None:intergenic	20.0%
!!	GATTTACATGTCTAAATAAA+TGG	+	chr8.3:54102381-54102400	MS.gene59840:intron	20.0%
!!	GTAGAGTTATGAAAAATATA+TGG	-	chr8.3:54102681-54102700	None:intergenic	20.0%
!!	TAAAATGCTAAATACTCATT+AGG	+	chr8.3:54102449-54102468	MS.gene59840:intron	20.0%
!!	TGCTCTTATTAATTGAATTA+AGG	-	chr8.3:54102087-54102106	None:intergenic	20.0%
!!!	AATTCAATTAATAAGAGCAT+AGG	+	chr8.3:54102088-54102107	MS.gene59840:intron	20.0%
!!!	ATTCAATTAATAAGAGCATA+GGG	+	chr8.3:54102089-54102108	MS.gene59840:intron	20.0%
!	AAAATAACTTTCAAGCTCTT+CGG	+	chr8.3:54102807-54102826	MS.gene59840:CDS	25.0%
!	AAATAAACAAGATGATGACT+TGG	-	chr8.3:54102024-54102043	None:intergenic	25.0%
!	ACTTTATCTTTGTCATCTTT+AGG	-	chr8.3:54102140-54102159	None:intergenic	25.0%
!	ATTGATCTTCTCATATTCAA+CGG	-	chr8.3:54102919-54102938	None:intergenic	25.0%
!!	TATTCTCTCATTGATTGATT+TGG	-	chr8.3:54102314-54102333	None:intergenic	25.0%
	AAAAATAAGACACTGTTTCC+TGG	+	chr8.3:54102186-54102205	MS.gene59840:intron	30.0%
	ACAAATTCATATATGATGCC+AGG	-	chr8.3:54102207-54102226	None:intergenic	30.0%
	ATAGATACGTAGTACATACT+TGG	+	chr8.3:54102412-54102431	MS.gene59840:intron	30.0%
	CATATATGAATTTGTGCAGA+TGG	+	chr8.3:54102212-54102231	MS.gene59840:intron	30.0%
	TAGTTTGAAGAACTTGTCAA+CGG	-	chr8.3:54101850-54101869	None:intergenic	30.0%
	TGAATATGAGAAGATCAATG+AGG	+	chr8.3:54102920-54102939	MS.gene59840:CDS	30.0%
!	GTAAACTTAGTACTGAACTT+GGG	+	chr8.3:54101814-54101833	MS.gene59840:CDS	30.0%
!!	GAAGTAATTGATAATGGTGA+TGG	+	chr8.3:54102873-54102892	MS.gene59840:CDS	30.0%
	AACTTCATGAAGGTGAAGAT+TGG	+	chr8.3:54101925-54101944	MS.gene59840:CDS	35.0%
	AGACATTGATGAGCACTATA+AGG	+	chr8.3:54102833-54102852	MS.gene59840:CDS	35.0%
	AGTTTGAAGAACTTGTCAAC+GGG	-	chr8.3:54101849-54101868	None:intergenic	35.0%
	ATATGAATTTGTGCAGATGG+AGG	+	chr8.3:54102215-54102234	MS.gene59840:intron	35.0%
	ATCTTCACCTTCATGAAGTT+TGG	-	chr8.3:54101925-54101944	None:intergenic	35.0%
!	GGTAAACTTAGTACTGAACT+TGG	+	chr8.3:54101813-54101832	MS.gene59840:CDS	35.0%
!!	AAGATGATGACTTGGTTATG+AGG	-	chr8.3:54102016-54102035	None:intergenic	35.0%
!!	ACACTGATTCAGTTAAACAC+TGG	+	chr8.3:54101952-54101971	MS.gene59840:CDS	35.0%
	AAACACTGGACTTATGTCGT+AGG	+	chr8.3:54101966-54101985	MS.gene59840:CDS	40.0%
	AATAAGTCCATCCAGCCATT+TGG	-	chr8.3:54102957-54102976	None:intergenic	40.0%
	ATAACTTTCAAGCTCTTCGG+TGG	+	chr8.3:54102810-54102829	MS.gene59840:CDS	40.0%
	CATCATGCCAAACTTCATGA+AGG	+	chr8.3:54101915-54101934	MS.gene59840:CDS	40.0%
	GCCATCTATTGTGATGTCAT+GGG	-	chr8.3:54102736-54102755	None:intergenic	40.0%
	GTCCTAAACGATATGTGAGA+AGG	+	chr8.3:54102549-54102568	MS.gene59840:intron	40.0%
	GTTGATGCTCATCTTGTCAA+AGG	+	chr8.3:54102996-54103015	MS.gene59840:CDS	40.0%
	TCCCATGACATCACAATAGA+TGG	+	chr8.3:54102732-54102751	MS.gene59840:intron	40.0%
	TGACATCACAATAGATGGCA+AGG	+	chr8.3:54102737-54102756	MS.gene59840:intron	40.0%
	TGCCATCTATTGTGATGTCA+TGG	-	chr8.3:54102737-54102756	None:intergenic	40.0%
	TGCCTTCTCACATATCGTTT+AGG	-	chr8.3:54102554-54102573	None:intergenic	40.0%
!	AATGGCTGGATGGACTTATT+AGG	+	chr8.3:54102957-54102976	MS.gene59840:CDS	40.0%
!!	ATTGATAATGGTGATGGCAG+TGG	+	chr8.3:54102879-54102898	MS.gene59840:CDS	40.0%
	ATATTGACCCACCAAATGGC+TGG	+	chr8.3:54102943-54102962	MS.gene59840:CDS	45.0%
	GAGGATATTGACCCACCAAA+TGG	+	chr8.3:54102939-54102958	MS.gene59840:CDS	45.0%
	TTGTGCAGATGGAGGATCTA+TGG	+	chr8.3:54102223-54102242	MS.gene59840:intron	45.0%
	AAGTCCATCCAGCCATTTGG+TGG	-	chr8.3:54102954-54102973	None:intergenic	50.0%
	AGTCCATCCAGCCATTTGGT+GGG	-	chr8.3:54102953-54102972	None:intergenic	50.0%
	ATGGCAGTGGAGCTGCAAAA+TGG	+	chr8.3:54102892-54102911	MS.gene59840:CDS	50.0%
	CAGATGGAGGATCTATGGAG+AGG	+	chr8.3:54102228-54102247	MS.gene59840:intron	50.0%
	TGACCCACCAAATGGCTGGA+TGG	+	chr8.3:54102947-54102966	MS.gene59840:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	54101801	54103031	54101801	ID=MS.gene59840
chr8.3	mRNA	54101801	54103031	54101801	ID=MS.gene59840.t1;Parent=MS.gene59840
chr8.3	exon	54101801	54101987	54101801	ID=MS.gene59840.t1.exon1;Parent=MS.gene59840.t1
chr8.3	CDS	54101801	54101987	54101801	ID=cds.MS.gene59840.t1;Parent=MS.gene59840.t1
chr8.3	exon	54102751	54103031	54102751	ID=MS.gene59840.t1.exon2;Parent=MS.gene59840.t1
chr8.3	CDS	54102751	54103031	54102751	ID=cds.MS.gene59840.t1;Parent=MS.gene59840.t1

Gene Sequence

>MS.gene59840

ATGGTGCTTGCTGGTAAACTTAGTACTGAACTTGGGATCAAAACACCCGTTGACAAGTTCTTCAAACTATATGCATCAGAACTTCACGAAGTGCAAAACATTAGTGAAAGAATTCATCATGCCAAACTTCATGAAGGTGAAGATTGGCATCACACTGATTCAGTTAAACACTGGACTTATGTCGTAGGTAATTAAGTTTCTAATTCAATTGACCTCATAACCAAGTCATCATCTTGTTTATTTATATATTTTTTTTGAACAATTTGTTTATTTATATATTGATCCTTAATTCAATTAATAAGAGCATAGGGACCATATTTTATACGAAGATTATGTCCTAAAGATGACAAAGATAAAGTTTTTCAGCTGTGAAATTTAGATACAAAAAAATAAGACACTGTTTCCTGGCATCATATATGAATTTGTGCAGATGGAGGATCTATGGAGAGGAAAAGATAAAAAAAATAAAACAGTCAGAAAAAAAAAACAATTCGATCAAAGTTTAATTAACCAAATCAATCAATGAGAGAATATATAGAATAAGTGATGGATTTATAGATACATCATAGTACATATACTTGATTTACATGTCTAAATAAATGGTAGTTACTATAGATACGTAGTACATACTTGGTATTCATGTCAAAATAAAATGCTAAATACTCATTAGGAGATACATGATTGACTTTATAGTTGTAATGAGTGCATATAATTCAGACTTCTTAAAGATATTCAAATATTGCATAGAGTCCTAAACGATATGTGAGAAGGCAACTAAACATTATATAGATTATTAATATTCATTTTTTTGTTTAAAAACTATTTTATTTGAAAAATGAAAACAATTTAATTGATTAGTTATTTTAAAAAAATGTGTCCATATATTTTTCATAACTCTACATACATTGTTTTAATTTAATTGGTATTAATTTCCCATGACATCACAATAGATGGCAAGGTAAACACATGTCATGAGAGTGTTGAAGAAGTTGATGAACAGAACAAAAAAATAACTTTCAAGCTCTTCGGTGGAGACATTGATGAGCACTATAAGGTCTTTAATCTGATCATTGAAGTAATTGATAATGGTGATGGCAGTGGAGCTGCAAAATGGACCGTTGAATATGAGAAGATCAATGAGGATATTGACCCACCAAATGGCTGGATGGACTTATTAGGCAAAATCACTCGAGAAGTTGATGCTCATCTTGTCAAAGGCACAAACATATAG

Protein sequence

>MS.gene59840.t1

MVLAGKLSTELGIKTPVDKFFKLYASELHEVQNISERIHHAKLHEGEDWHHTDSVKHWTYVVDGKVNTCHESVEEVDEQNKKITFKLFGGDIDEHYKVFNLIIEVIDNGDGSGAAKWTVEYEKINEDIDPPNGWMDLLGKITREVDAHLVKGTNI