Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83831.t1 | XP_003598994.1 | 93.9 | 670 | 35 | 2 | 1 | 669 | 1 | 665 | 0.00E+00 | 1119 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83831.t1 | G7IZA9 | 93.9 | 670 | 35 | 2 | 1 | 669 | 1 | 665 | 0.0e+00 | 1119.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene83831 | 0.846415 | 2.20E-59 | -1.69E-46 |
| MS.gene04933 | MS.gene83831 | 0.801217 | 9.99E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene83831 | 0.814399 | 1.57E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene83831 | 0.8088 | 2.59E-50 | -1.69E-46 |
| MS.gene050021 | MS.gene83831 | 0.818359 | 2.04E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene83831 | 0.815629 | 8.38E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene83831 | 0.82653 | 2.58E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene83831 | 0.817763 | 2.79E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene83831 | 0.844844 | 5.88E-59 | -1.69E-46 |
| MS.gene050680 | MS.gene83831 | 0.802261 | 6.10E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene83831 | 0.86703 | 1.85E-65 | -1.69E-46 |
| MS.gene050787 | MS.gene83831 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene050820 | MS.gene83831 | 0.816792 | 4.61E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene83831 | 0.856004 | 4.31E-62 | -1.69E-46 |
| MS.gene051257 | MS.gene83831 | 0.802541 | 5.34E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene83831 | 0.824187 | 9.24E-54 | -1.69E-46 |
| MS.gene051568 | MS.gene83831 | 0.802802 | 4.72E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene83831 | 0.834213 | 3.41E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene83831 | 0.826986 | 2.01E-54 | -1.69E-46 |
| MS.gene052190 | MS.gene83831 | 0.816226 | 6.17E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene83831 | 0.819638 | 1.05E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene83831 | 0.81936 | 1.21E-52 | -1.69E-46 |
| MS.gene052867 | MS.gene83831 | 0.819782 | 9.69E-53 | -1.69E-46 |
| MS.gene053054 | MS.gene83831 | -0.816427 | 5.56E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene83831 | 0.831972 | 1.23E-55 | -1.69E-46 |
| MS.gene053584 | MS.gene83831 | 0.823347 | 1.46E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene83831 | 0.830676 | 2.57E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene83831 | 0.812833 | 3.48E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene83831 | 0.806611 | 7.56E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene83831 | -0.84864 | 5.39E-60 | -1.69E-46 |
| MS.gene054405 | MS.gene83831 | 0.853631 | 2.10E-61 | -1.69E-46 |
| MS.gene054468 | MS.gene83831 | 0.823569 | 1.29E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene83831 | 0.824387 | 8.30E-54 | -1.69E-46 |
| MS.gene054610 | MS.gene83831 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene83831 | 0.806815 | 6.85E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene83831 | 0.835404 | 1.71E-56 | -1.69E-46 |
| MS.gene055357 | MS.gene83831 | 0.818999 | 1.46E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene83831 | 0.835645 | 1.49E-56 | -1.69E-46 |
| MS.gene055367 | MS.gene83831 | 0.815584 | 8.58E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene83831 | 0.826066 | 3.33E-54 | -1.69E-46 |
| MS.gene055804 | MS.gene83831 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene056087 | MS.gene83831 | 0.81198 | 5.34E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene83831 | 0.834554 | 2.80E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene83831 | 0.81956 | 1.09E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene83831 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene83831 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene057244 | MS.gene83831 | -0.839996 | 1.13E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene83831 | 0.808125 | 3.61E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene83831 | 0.849036 | 4.18E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene83831 | 0.816577 | 5.15E-52 | -1.69E-46 |
| MS.gene058736 | MS.gene83831 | 0.827057 | 1.93E-54 | -1.69E-46 |
| MS.gene05909 | MS.gene83831 | -0.807199 | 5.68E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene83831 | 0.821087 | 4.86E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene83831 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene83831 | 0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene83831 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene059896 | MS.gene83831 | -0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene83831 | -0.852282 | 5.11E-61 | -1.69E-46 |
| MS.gene060322 | MS.gene83831 | 0.813422 | 2.58E-51 | -1.69E-46 |
| MS.gene060553 | MS.gene83831 | 0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene83831 | 0.805989 | 1.02E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene83831 | 0.809327 | 2.00E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene83831 | -0.821901 | 3.16E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene83831 | -0.884531 | 1.77E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83831.t1 | MTR_3g025870 | 93.881 | 670 | 35 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1259 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83831.t1 | AT5G61040 | 31.660 | 717 | 309 | 24 | 1 | 666 | 1 | 587 | 4.99e-73 | 247 |
| MS.gene83831.t1 | AT5G08010 | 30.229 | 698 | 316 | 21 | 1 | 664 | 1 | 561 | 1.41e-54 | 196 |
Find 114 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTTAAAGATCCAATTT+TGG | 0.143154 | 3.2:-15842452 | None:intergenic |
| TGCATCAAGTTTCATCTTCT+TGG | 0.170236 | 3.2:-15842476 | None:intergenic |
| ACCTGATAGGTTGAGAATTA+AGG | 0.176647 | 3.2:-15845358 | None:intergenic |
| ACCATATGATGATAACTTTA+AGG | 0.177959 | 3.2:+15842027 | MS.gene83831:CDS |
| GTTCCTTCCTTGCCCAAAAT+TGG | 0.190143 | 3.2:+15842439 | MS.gene83831:CDS |
| AAAGACATATTCTTCCATTT+TGG | 0.197205 | 3.2:-15842254 | None:intergenic |
| CAACTTTCTAAGGAATTTAA+TGG | 0.229860 | 3.2:-15842202 | None:intergenic |
| GGGTTGTTTGCGGGAGGTTA+AGG | 0.240369 | 3.2:-15841804 | None:intergenic |
| TTCAGTCTTGGGATTTCTCT+TGG | 0.270448 | 3.2:+15843762 | MS.gene83831:CDS |
| GGTTGTTTGCGGGAGGTTAA+GGG | 0.271702 | 3.2:-15841803 | None:intergenic |
| CAAAGAATCATATGATAAAA+AGG | 0.284476 | 3.2:+15844028 | MS.gene83831:CDS |
| CATCTTTATTAATTCTTCAT+AGG | 0.285722 | 3.2:-15845406 | None:intergenic |
| TTCCTTAGAAAGTTGTTTCA+TGG | 0.286371 | 3.2:+15842210 | MS.gene83831:CDS |
| GAGCAAAATACGAGTAGTTT+TGG | 0.297577 | 3.2:+15842067 | MS.gene83831:CDS |
| CGGCGTTTCTCTTCAGTCTT+GGG | 0.311500 | 3.2:+15843751 | MS.gene83831:CDS |
| ACGTCTCCGGGGTTGTTTGC+GGG | 0.313131 | 3.2:-15841813 | None:intergenic |
| CCTGATAGGTTGAGAATTAA+GGG | 0.320911 | 3.2:-15845357 | None:intergenic |
| GAGTTACAAAATGAAAATTA+TGG | 0.330169 | 3.2:+15843912 | MS.gene83831:CDS |
| CTGGTTATTTAGCTAAATAT+TGG | 0.333394 | 3.2:+15841696 | MS.gene83831:CDS |
| TTATCATCATATGGTGATAA+TGG | 0.336970 | 3.2:-15842019 | None:intergenic |
| CCGGCGTTTCTCTTCAGTCT+TGG | 0.340040 | 3.2:+15843750 | MS.gene83831:CDS |
| CCAGATGAAAGTAAAGTCTT+TGG | 0.340166 | 3.2:+15845242 | MS.gene83831:CDS |
| AGCCATGAAACAACTTTCTA+AGG | 0.343642 | 3.2:-15842212 | None:intergenic |
| AAGGTTCGCTTTCACATGAT+TGG | 0.350463 | 3.2:+15845484 | MS.gene83831:CDS |
| CCCTTAATTCTCAACCTATC+AGG | 0.358072 | 3.2:+15845357 | MS.gene83831:CDS |
| CCAAAGACTTTACTTTCATC+TGG | 0.358080 | 3.2:-15845242 | None:intergenic |
| CGAAATAACCTTGTTGTAGA+TGG | 0.359330 | 3.2:-15842292 | None:intergenic |
| CTTCAAGAGCTTCACCTGAT+AGG | 0.366603 | 3.2:-15845371 | None:intergenic |
| ATTCCTATCCACAACTCTTT+CGG | 0.369194 | 3.2:+15842130 | MS.gene83831:CDS |
| TCCTTGGATGGTCCTTCAAC+AGG | 0.378617 | 3.2:+15841899 | MS.gene83831:CDS |
| ATGCAGCTCCTTACCATTGA+AGG | 0.386570 | 3.2:-15843958 | None:intergenic |
| ATATAAAGAGCATGCCAAAA+TGG | 0.389469 | 3.2:+15842240 | MS.gene83831:CDS |
| GAAGCTGAACTTGAGAGGTT+AGG | 0.389764 | 3.2:+15844095 | MS.gene83831:CDS |
| AGTGGAAAACTCACTCAATA+TGG | 0.390330 | 3.2:+15842544 | MS.gene83831:CDS |
| TCAGTCTTGGGATTTCTCTT+GGG | 0.395373 | 3.2:+15843763 | MS.gene83831:CDS |
| TGATTCTTTGCATTCTACTC+TGG | 0.395507 | 3.2:-15844015 | None:intergenic |
| AAGCTGAACTTGAGAGGTTA+GGG | 0.400444 | 3.2:+15844096 | MS.gene83831:CDS |
| GGTGAAACTGCATAGTTTGC+AGG | 0.405373 | 3.2:-15845132 | None:intergenic |
| GTTGTGGATAGGAATCAATT+TGG | 0.417343 | 3.2:-15842122 | None:intergenic |
| AAAACGTTTAGTTGAGAGAA+AGG | 0.428409 | 3.2:-15842161 | None:intergenic |
| GGAGATGTGGCTTCTTATAG+AGG | 0.432304 | 3.2:+15841920 | MS.gene83831:CDS |
| TCCTTAAAGTTATCATCATA+TGG | 0.436346 | 3.2:-15842028 | None:intergenic |
| CACGTCTCCGGGGTTGTTTG+CGG | 0.439128 | 3.2:-15841814 | None:intergenic |
| ATCAATTTGGCAGGAAACTC+AGG | 0.441226 | 3.2:-15842109 | None:intergenic |
| GTTGTTTGCGGGAGGTTAAG+GGG | 0.443607 | 3.2:-15841802 | None:intergenic |
| CAGTGCATTGACTGGAAGTA+AGG | 0.443744 | 3.2:+15842363 | MS.gene83831:CDS |
| GCTCGGATAATTTCCTATCA+AGG | 0.444506 | 3.2:-15844139 | None:intergenic |
| TCTAGTGAATTGAATGTTAG+TGG | 0.446663 | 3.2:+15845558 | MS.gene83831:CDS |
| ATGAAACTTGATGCAGTTGA+TGG | 0.447217 | 3.2:+15842484 | MS.gene83831:CDS |
| CTCTGAAGACAAATGATAAG+AGG | 0.447999 | 3.2:-15841744 | None:intergenic |
| GATTCTTTGCATTCTACTCT+GGG | 0.455473 | 3.2:-15844014 | None:intergenic |
| CTTTCACTCGTGTTTCGAGT+TGG | 0.461666 | 3.2:-15845194 | None:intergenic |
| TGAATGCGTCAAGCCTTGAT+AGG | 0.463478 | 3.2:+15844126 | MS.gene83831:CDS |
| CAACCCCGGAGACGTGAAAA+GGG | 0.464778 | 3.2:+15841821 | MS.gene83831:CDS |
| ATTGTTGAAAGAACCAAGAA+AGG | 0.468316 | 3.2:+15845636 | MS.gene83831:CDS |
| ATTCTCTGATGCGAGTTCCT+TGG | 0.470313 | 3.2:+15841883 | MS.gene83831:CDS |
| GAAGCCACATCTCCTGTTGA+AGG | 0.474798 | 3.2:-15841911 | None:intergenic |
| ACAACCCCGGAGACGTGAAA+AGG | 0.475375 | 3.2:+15841820 | MS.gene83831:CDS |
| TGGATAGGAATCAATTTGGC+AGG | 0.489229 | 3.2:-15842118 | None:intergenic |
| ACATGTGATCATTCCTTCAA+TGG | 0.489917 | 3.2:+15843945 | MS.gene83831:CDS |
| CTCTTATCATTTGTCTTCAG+AGG | 0.490889 | 3.2:+15841745 | MS.gene83831:CDS |
| TAATGGTCTACTAACATGCT+CGG | 0.495493 | 3.2:-15842185 | None:intergenic |
| CCATGATGTTAGTTTCCAAA+AGG | 0.500268 | 3.2:+15845272 | MS.gene83831:CDS |
| AAAATTCTTGCAGATTGATC+CGG | 0.500918 | 3.2:+15845029 | MS.gene83831:intron |
| GGAGGTTAAGGGGCTGCTAA+AGG | 0.506632 | 3.2:-15841792 | None:intergenic |
| GTCATCAATAAGTTTCCTCT+AGG | 0.509607 | 3.2:-15845306 | None:intergenic |
| GTTGAAGCAGAATGAGAACT+TGG | 0.515778 | 3.2:+15843839 | MS.gene83831:CDS |
| AATGGTCTACTAACATGCTC+GGG | 0.515836 | 3.2:-15842184 | None:intergenic |
| AGGTGGAGAGGCTATTGATA+AGG | 0.520272 | 3.2:+15845610 | MS.gene83831:CDS |
| ACTGCATAGTTTGCAGGAAG+AGG | 0.525668 | 3.2:-15845126 | None:intergenic |
| ATACGATTTCGCGACAATGT+TGG | 0.527511 | 3.2:+15845524 | MS.gene83831:CDS |
| TGATCATTCCTTCAATGGTA+AGG | 0.528000 | 3.2:+15843950 | MS.gene83831:CDS |
| GATTATAAGCTGCATAAAGC+TGG | 0.528729 | 3.2:+15842385 | MS.gene83831:CDS |
| ATAGGTTGAGAATTAAGGGC+TGG | 0.530163 | 3.2:-15845353 | None:intergenic |
| TCATCAATAAGTTTCCTCTA+GGG | 0.532936 | 3.2:-15845305 | None:intergenic |
| TTTCGAGCTGACACGGCTAG+TGG | 0.539697 | 3.2:+15845081 | MS.gene83831:CDS |
| TCCTGTTGAAGGACCATCCA+AGG | 0.540053 | 3.2:-15841900 | None:intergenic |
| TGAATGTGATAATGAGGAGG+TGG | 0.547622 | 3.2:+15845593 | MS.gene83831:CDS |
| GTGATAATGAGGAGGTGGAG+AGG | 0.548162 | 3.2:+15845598 | MS.gene83831:CDS |
| AGTTTGATCAGTGCATTGAC+TGG | 0.553765 | 3.2:+15842355 | MS.gene83831:CDS |
| TGTCCGAAAGAGTTGTGGAT+AGG | 0.561918 | 3.2:-15842133 | None:intergenic |
| GCAAAATCTGCTACAAACTC+CGG | 0.565111 | 3.2:-15845048 | None:intergenic |
| TAGGTTGAGAATTAAGGGCT+GGG | 0.566236 | 3.2:-15845352 | None:intergenic |
| CATGATAGTGACGACAAAGA+AGG | 0.571551 | 3.2:+15845465 | MS.gene83831:CDS |
| GTCGTCACTATCATGAATGA+TGG | 0.571660 | 3.2:-15845457 | None:intergenic |
| TCTGATGCGAGTTCCTTGGA+TGG | 0.576753 | 3.2:+15841887 | MS.gene83831:CDS |
| TGAACTTGAGAGGTTAGGGT+TGG | 0.576928 | 3.2:+15844100 | MS.gene83831:CDS |
| TGGTCCTTCAACAGGAGATG+TGG | 0.577559 | 3.2:+15841907 | MS.gene83831:CDS |
| AGGTTATTTCGTGTTAGCAA+TGG | 0.581371 | 3.2:+15842304 | MS.gene83831:CDS |
| AGGTGAGTTTCGAGCTGACA+CGG | 0.586885 | 3.2:+15845074 | MS.gene83831:CDS |
| TATGCTTACCTCAACAAGCT+CGG | 0.589234 | 3.2:-15844156 | None:intergenic |
| TATGATGATAACTTTAAGGA+TGG | 0.589573 | 3.2:+15842031 | MS.gene83831:CDS |
| GAAATTATCCGAGCTTGTTG+AGG | 0.590101 | 3.2:+15844148 | MS.gene83831:CDS |
| AGCTTGAAGCTGAACTTGAG+AGG | 0.594301 | 3.2:+15844090 | MS.gene83831:CDS |
| GATTTCGCGACAATGTTGGA+AGG | 0.608266 | 3.2:+15845528 | MS.gene83831:CDS |
| TAAGGGGCTGCTAAAGGACT+CGG | 0.611733 | 3.2:-15841786 | None:intergenic |
| TAACCTCCCGCAAACAACCC+CGG | 0.618799 | 3.2:+15841807 | MS.gene83831:CDS |
| CATCAATAAGTTTCCTCTAG+GGG | 0.619494 | 3.2:-15845304 | None:intergenic |
| GTTGTAGATGGTGATGAAAG+AGG | 0.619822 | 3.2:-15842280 | None:intergenic |
| AGGAAGAGGTGTGGTGACAT+TGG | 0.623249 | 3.2:-15845112 | None:intergenic |
| ATTTCGCGACAATGTTGGAA+GGG | 0.624496 | 3.2:+15845529 | MS.gene83831:CDS |
| GAGATGTGGCTTCTTATAGA+GGG | 0.627578 | 3.2:+15841921 | MS.gene83831:CDS |
| ATCAATAAGTTTCCTCTAGG+GGG | 0.628805 | 3.2:-15845303 | None:intergenic |
| GAAAGATTCAATGACCGTGA+AGG | 0.633573 | 3.2:+15843890 | MS.gene83831:CDS |
| CCAAGACTGAAGAGAAACGC+CGG | 0.633812 | 3.2:-15843750 | None:intergenic |
| TCTCCGGGGTTGTTTGCGGG+AGG | 0.635252 | 3.2:-15841810 | None:intergenic |
| CTATCATGAATGATGGCTGA+TGG | 0.644869 | 3.2:-15845450 | None:intergenic |
| AAGTTGTGAATGTGATAATG+AGG | 0.660939 | 3.2:+15845587 | MS.gene83831:CDS |
| TTTCATCACCATCTACAACA+AGG | 0.679672 | 3.2:+15842284 | MS.gene83831:CDS |
| TGGGATAATAACTTCCAACA+TGG | 0.689562 | 3.2:+15843782 | MS.gene83831:CDS |
| AAACGTAAACTCAGTTCATG+CGG | 0.690091 | 3.2:-15845153 | None:intergenic |
| CAGTTGATGGACGAAGTCGA+AGG | 0.702830 | 3.2:+15842497 | MS.gene83831:CDS |
| TTGTGAATGTGATAATGAGG+AGG | 0.705699 | 3.2:+15845590 | MS.gene83831:CDS |
| ATAGTTTGCAGGAAGAGGTG+TGG | 0.753936 | 3.2:-15845121 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATCTTAAAAATATTGA+AGG | - | chr3.2:15843353-15843372 | None:intergenic | 10.0% |
| !!! | AGTTTTAATATATGAAAAAT+GGG | + | chr3.2:15844417-15844436 | MS.gene83831:intron | 10.0% |
| !!! | TAGTTTTAATATATGAAAAA+TGG | + | chr3.2:15844416-15844435 | MS.gene83831:intron | 10.0% |
| !! | AAAAAAGATATTGTATTCTA+TGG | + | chr3.2:15845680-15845699 | MS.gene83831:CDS | 15.0% |
| !! | TACAAAAATAAGTATATGTA+TGG | - | chr3.2:15844758-15844777 | None:intergenic | 15.0% |
| !! | CAAAGAATCATATGATAAAA+AGG | + | chr3.2:15844028-15844047 | MS.gene83831:CDS | 20.0% |
| !! | CATCTTTATTAATTCTTCAT+AGG | - | chr3.2:15845409-15845428 | None:intergenic | 20.0% |
| !! | GAAAAATTGTAATGAAATCT+TGG | + | chr3.2:15843200-15843219 | MS.gene83831:intron | 20.0% |
| !! | GAGTTACAAAATGAAAATTA+TGG | + | chr3.2:15843912-15843931 | MS.gene83831:CDS | 20.0% |
| !! | TAAATATTGGAAAAAGAGTT+TGG | + | chr3.2:15841709-15841728 | MS.gene83831:CDS | 20.0% |
| !! | TTCAAAGAATGGAATTAAAA+TGG | + | chr3.2:15844297-15844316 | MS.gene83831:intron | 20.0% |
| !!! | AAAAGAAAGAGTTCTAAAAA+AGG | - | chr3.2:15842750-15842769 | None:intergenic | 20.0% |
| !!! | AAGATGTTTTTTTAGATAGA+AGG | + | chr3.2:15841846-15841865 | MS.gene83831:CDS | 20.0% |
| !!! | AATTTTCTCTATTCAGTATT+CGG | - | chr3.2:15842333-15842352 | None:intergenic | 20.0% |
| !!! | AGATGTTTTTTTAGATAGAA+GGG | + | chr3.2:15841847-15841866 | MS.gene83831:CDS | 20.0% |
| !!! | ATCATTTAAAGATCCAATTT+TGG | - | chr3.2:15842455-15842474 | None:intergenic | 20.0% |
| !!! | TCATTTAAAGATCCAATTTT+GGG | - | chr3.2:15842454-15842473 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTGATTAACTCA+AGG | - | chr3.2:15843431-15843450 | None:intergenic | 20.0% |
| !!! | TTTTTTGCATTTTGAAAAAG+AGG | - | chr3.2:15845666-15845685 | None:intergenic | 20.0% |
| ! | AAACATTTCAAACACAACAT+AGG | - | chr3.2:15842602-15842621 | None:intergenic | 25.0% |
| ! | AATATTGTTAGTGTGACAAT+GGG | + | chr3.2:15844994-15845013 | MS.gene83831:intron | 25.0% |
| ! | ACACAAAACTGATTAATGAA+AGG | - | chr3.2:15843534-15843553 | None:intergenic | 25.0% |
| ! | ACCATATGATGATAACTTTA+AGG | + | chr3.2:15842027-15842046 | MS.gene83831:CDS | 25.0% |
| ! | ATAATTTCCTCAAGAATAAC+AGG | - | chr3.2:15843113-15843132 | None:intergenic | 25.0% |
| ! | ATAGAATGAAAAGAAGTCTA+TGG | - | chr3.2:15843149-15843168 | None:intergenic | 25.0% |
| ! | ATATGAGATTTACTTTACAC+TGG | - | chr3.2:15844933-15844952 | None:intergenic | 25.0% |
| ! | CAATATGATCTCTATATACA+AGG | - | chr3.2:15844341-15844360 | None:intergenic | 25.0% |
| ! | CTAATGGAAATTTCAAAGAA+TGG | + | chr3.2:15844286-15844305 | MS.gene83831:intron | 25.0% |
| ! | CTGGTTATTTAGCTAAATAT+TGG | + | chr3.2:15841696-15841715 | MS.gene83831:CDS | 25.0% |
| ! | GAAAAACACAAAAATGTAGT+TGG | + | chr3.2:15842412-15842431 | MS.gene83831:CDS | 25.0% |
| ! | GCTATCAAAACAAAAATACA+TGG | - | chr3.2:15844892-15844911 | None:intergenic | 25.0% |
| ! | TACTAACGAAAGATATATTC+AGG | + | chr3.2:15843561-15843580 | MS.gene83831:intron | 25.0% |
| ! | TAGAACTTGAAAGCAAAATA+AGG | - | chr3.2:15844869-15844888 | None:intergenic | 25.0% |
| ! | TATTTAAGCTGTTTAGTTAC+TGG | - | chr3.2:15842927-15842946 | None:intergenic | 25.0% |
| ! | TCCTTAAAGTTATCATCATA+TGG | - | chr3.2:15842031-15842050 | None:intergenic | 25.0% |
| ! | TTATCATCATATGGTGATAA+TGG | - | chr3.2:15842022-15842041 | None:intergenic | 25.0% |
| ! | TTTGTACTTCTAGTAGATAT+TGG | + | chr3.2:15844772-15844791 | MS.gene83831:intron | 25.0% |
| !! | AAAGACATATTCTTCCATTT+TGG | - | chr3.2:15842257-15842276 | None:intergenic | 25.0% |
| !! | CAACTTTCTAAGGAATTTAA+TGG | - | chr3.2:15842205-15842224 | None:intergenic | 25.0% |
| !! | TATGATGATAACTTTAAGGA+TGG | + | chr3.2:15842031-15842050 | MS.gene83831:CDS | 25.0% |
| !!! | GATGTTTTTTTAGATAGAAG+GGG | + | chr3.2:15841848-15841867 | MS.gene83831:CDS | 25.0% |
| !!! | TGTTTTTTCGTTAGTTAGTT+TGG | + | chr3.2:15843496-15843515 | MS.gene83831:intron | 25.0% |
| !!! | TTGCAATATAACGGATTTTT+AGG | - | chr3.2:15842695-15842714 | None:intergenic | 25.0% |
| AAAACGTTTAGTTGAGAGAA+AGG | - | chr3.2:15842164-15842183 | None:intergenic | 30.0% | |
| AAAATTCTTGCAGATTGATC+CGG | + | chr3.2:15845029-15845048 | MS.gene83831:intron | 30.0% | |
| AAACACAAAAATGTAGTTGG+AGG | + | chr3.2:15842415-15842434 | MS.gene83831:CDS | 30.0% | |
| AACACAAAAATGTAGTTGGA+GGG | + | chr3.2:15842416-15842435 | MS.gene83831:CDS | 30.0% | |
| ATATCATTCAGTGCATGTTT+GGG | + | chr3.2:15844481-15844500 | MS.gene83831:intron | 30.0% | |
| ATTGTTGAAAGAACCAAGAA+AGG | + | chr3.2:15845636-15845655 | MS.gene83831:CDS | 30.0% | |
| CAATATTGTTAGTGTGACAA+TGG | + | chr3.2:15844993-15845012 | MS.gene83831:intron | 30.0% | |
| CATTGAGTAAATAGTCACTT+TGG | - | chr3.2:15843642-15843661 | None:intergenic | 30.0% | |
| CTAAACAGCTTAAATATAGC+TGG | + | chr3.2:15842931-15842950 | MS.gene83831:intron | 30.0% | |
| CTGGAAAAAGAAACTTTGTA+TGG | - | chr3.2:15844914-15844933 | None:intergenic | 30.0% | |
| CTTTATATTGCTGGAAAATG+AGG | + | chr3.2:15842640-15842659 | MS.gene83831:intron | 30.0% | |
| TCATCAATAAGTTTCCTCTA+GGG | - | chr3.2:15845308-15845327 | None:intergenic | 30.0% | |
| TCTAGTAGATATTGGAATTG+TGG | + | chr3.2:15844780-15844799 | MS.gene83831:intron | 30.0% | |
| TCTAGTGAATTGAATGTTAG+TGG | + | chr3.2:15845558-15845577 | MS.gene83831:CDS | 30.0% | |
| TGGAAAAAGAGTTTGGAAAA+TGG | + | chr3.2:15841716-15841735 | MS.gene83831:CDS | 30.0% | |
| TTGTTTAGTACCAATGTGTT+TGG | - | chr3.2:15844643-15844662 | None:intergenic | 30.0% | |
| ! | AAGTTGTGAATGTGATAATG+AGG | + | chr3.2:15845587-15845606 | MS.gene83831:CDS | 30.0% |
| ! | AGCTATCAATATGCTTTTCA+GGG | - | chr3.2:15843992-15844011 | None:intergenic | 30.0% |
| ! | ATATAAAGAGCATGCCAAAA+TGG | + | chr3.2:15842240-15842259 | MS.gene83831:CDS | 30.0% |
| ! | CTCATTTTCCAGCAATATAA+AGG | - | chr3.2:15842642-15842661 | None:intergenic | 30.0% |
| ! | TGTTAAGGTGAAAACTTTTG+AGG | - | chr3.2:15844371-15844390 | None:intergenic | 30.0% |
| ! | TTCATTTTGTAACTCCTTCA+CGG | - | chr3.2:15843907-15843926 | None:intergenic | 30.0% |
| ! | TTCCTTAGAAAGTTGTTTCA+TGG | + | chr3.2:15842210-15842229 | MS.gene83831:CDS | 30.0% |
| ! | TTTTGACAAAAGCTACACTT+TGG | - | chr3.2:15844565-15844584 | None:intergenic | 30.0% |
| !! | TTCTCTTTTATTTGCCATGT+TGG | - | chr3.2:15843799-15843818 | None:intergenic | 30.0% |
| !! | TTTCATCTGGCTATTTTCAA+GGG | - | chr3.2:15845232-15845251 | None:intergenic | 30.0% |
| !!! | TTTTCTGATGACTTGTTTAG+TGG | + | chr3.2:15842526-15842545 | MS.gene83831:CDS | 30.0% |
| !!! | TTTTGCGTTTTAACTGGTTT+AGG | + | chr3.2:15843326-15843345 | MS.gene83831:intron | 30.0% |
| !!! | TTTTTTAGATAGAAGGGGTT+TGG | + | chr3.2:15841853-15841872 | MS.gene83831:CDS | 30.0% |
| AAACACACCTGTTATTCTTG+AGG | + | chr3.2:15843103-15843122 | MS.gene83831:intron | 35.0% | |
| AAACGTAAACTCAGTTCATG+CGG | - | chr3.2:15845156-15845175 | None:intergenic | 35.0% | |
| ACACAAAAATGTAGTTGGAG+GGG | + | chr3.2:15842417-15842436 | MS.gene83831:CDS | 35.0% | |
| ACATGTGATCATTCCTTCAA+TGG | + | chr3.2:15843945-15843964 | MS.gene83831:CDS | 35.0% | |
| ACTAACGAAAAAACACATCG+AGG | - | chr3.2:15843491-15843510 | None:intergenic | 35.0% | |
| ACTTGAACCAAACATAGCTA+TGG | - | chr3.2:15844962-15844981 | None:intergenic | 35.0% | |
| AGCCATGAAACAACTTTCTA+AGG | - | chr3.2:15842215-15842234 | None:intergenic | 35.0% | |
| AGTGGAAAACTCACTCAATA+TGG | + | chr3.2:15842544-15842563 | MS.gene83831:CDS | 35.0% | |
| ATCAATAAGTTTCCTCTAGG+GGG | - | chr3.2:15845306-15845325 | None:intergenic | 35.0% | |
| ATGAAACTTGATGCAGTTGA+TGG | + | chr3.2:15842484-15842503 | MS.gene83831:CDS | 35.0% | |
| ATTCCTATCCACAACTCTTT+CGG | + | chr3.2:15842130-15842149 | MS.gene83831:CDS | 35.0% | |
| CAAAATAAGGCATGCAACAT+TGG | - | chr3.2:15844856-15844875 | None:intergenic | 35.0% | |
| CAATCGCAGTTGCAATATAA+CGG | - | chr3.2:15842704-15842723 | None:intergenic | 35.0% | |
| CATCAATAAGTTTCCTCTAG+GGG | - | chr3.2:15845307-15845326 | None:intergenic | 35.0% | |
| CCAAAGACTTTACTTTCATC+TGG | - | chr3.2:15845245-15845264 | None:intergenic | 35.0% | |
| CCAGATGAAAGTAAAGTCTT+TGG | + | chr3.2:15845242-15845261 | MS.gene83831:CDS | 35.0% | |
| CTCTTATCATTTGTCTTCAG+AGG | + | chr3.2:15841745-15841764 | MS.gene83831:CDS | 35.0% | |
| CTTGCAAACCTTTATATTGC+TGG | + | chr3.2:15842631-15842650 | MS.gene83831:intron | 35.0% | |
| GATATCATTCAGTGCATGTT+TGG | + | chr3.2:15844480-15844499 | MS.gene83831:intron | 35.0% | |
| GATTATAAGCTGCATAAAGC+TGG | + | chr3.2:15842385-15842404 | MS.gene83831:CDS | 35.0% | |
| GATTCTTTGCATTCTACTCT+GGG | - | chr3.2:15844017-15844036 | None:intergenic | 35.0% | |
| GTCATCAATAAGTTTCCTCT+AGG | - | chr3.2:15845309-15845328 | None:intergenic | 35.0% | |
| GTTGTGGATAGGAATCAATT+TGG | - | chr3.2:15842125-15842144 | None:intergenic | 35.0% | |
| TAATGGTCTACTAACATGCT+CGG | - | chr3.2:15842188-15842207 | None:intergenic | 35.0% | |
| TGAAAAGAAGTCTATGGCAT+TGG | - | chr3.2:15843143-15843162 | None:intergenic | 35.0% | |
| TGATCATTCCTTCAATGGTA+AGG | + | chr3.2:15843950-15843969 | MS.gene83831:CDS | 35.0% | |
| TGATTCTTTGCATTCTACTC+TGG | - | chr3.2:15844018-15844037 | None:intergenic | 35.0% | |
| TGCATCAAGTTTCATCTTCT+TGG | - | chr3.2:15842479-15842498 | None:intergenic | 35.0% | |
| TGGGATAATAACTTCCAACA+TGG | + | chr3.2:15843782-15843801 | MS.gene83831:CDS | 35.0% | |
| TTTCATCACCATCTACAACA+AGG | + | chr3.2:15842284-15842303 | MS.gene83831:CDS | 35.0% | |
| ! | ACCTGATAGGTTGAGAATTA+AGG | - | chr3.2:15845361-15845380 | None:intergenic | 35.0% |
| ! | AGCATAACTGTCACATTTTC+CGG | + | chr3.2:15844173-15844192 | MS.gene83831:intron | 35.0% |
| ! | AGGTTATTTCGTGTTAGCAA+TGG | + | chr3.2:15842304-15842323 | MS.gene83831:CDS | 35.0% |
| ! | CCATGATGTTAGTTTCCAAA+AGG | + | chr3.2:15845272-15845291 | MS.gene83831:CDS | 35.0% |
| ! | CCTGATAGGTTGAGAATTAA+GGG | - | chr3.2:15845360-15845379 | None:intergenic | 35.0% |
| ! | CGAAATAACCTTGTTGTAGA+TGG | - | chr3.2:15842295-15842314 | None:intergenic | 35.0% |
| ! | CTCTGAAGACAAATGATAAG+AGG | - | chr3.2:15841747-15841766 | None:intergenic | 35.0% |
| ! | GAGCAAAATACGAGTAGTTT+TGG | + | chr3.2:15842067-15842086 | MS.gene83831:CDS | 35.0% |
| ! | GAGCTATCAATATGCTTTTC+AGG | - | chr3.2:15843993-15844012 | None:intergenic | 35.0% |
| ! | GCTATCAATATGCTTTTCAG+GGG | - | chr3.2:15843991-15844010 | None:intergenic | 35.0% |
| ! | GTATGGATTGACAATGTGTT+TGG | - | chr3.2:15844741-15844760 | None:intergenic | 35.0% |
| ! | TAAAGATCCAATTTTGGGCA+AGG | - | chr3.2:15842449-15842468 | None:intergenic | 35.0% |
| ! | TTGTGAATGTGATAATGAGG+AGG | + | chr3.2:15845590-15845609 | MS.gene83831:CDS | 35.0% |
| ! | TTTTGCTCCATAGCTATGTT+TGG | + | chr3.2:15844952-15844971 | MS.gene83831:intron | 35.0% |
| !! | AAAGCGTTTTGCGTTTTAAC+TGG | + | chr3.2:15843320-15843339 | MS.gene83831:intron | 35.0% |
| !! | CCTTTTGGAAACTAACATCA+TGG | - | chr3.2:15845275-15845294 | None:intergenic | 35.0% |
| !! | CTTTCATCTGGCTATTTTCA+AGG | - | chr3.2:15845233-15845252 | None:intergenic | 35.0% |
| !! | TCGTTAGTTAGTTTGGTTCT+TGG | + | chr3.2:15843503-15843522 | MS.gene83831:intron | 35.0% |
| AACGCCGGATCTGATAATTA+CGG | - | chr3.2:15843738-15843757 | None:intergenic | 40.0% | |
| AAGCTGAACTTGAGAGGTTA+GGG | + | chr3.2:15844096-15844115 | MS.gene83831:CDS | 40.0% | |
| AAGGTTCGCTTTCACATGAT+TGG | + | chr3.2:15845484-15845503 | MS.gene83831:CDS | 40.0% | |
| AATGGTCTACTAACATGCTC+GGG | - | chr3.2:15842187-15842206 | None:intergenic | 40.0% | |
| ACGTCCGTAATTATCAGATC+CGG | + | chr3.2:15843731-15843750 | MS.gene83831:intron | 40.0% | |
| AGTGTGACAATGGGTGTTAA+TGG | + | chr3.2:15845003-15845022 | MS.gene83831:intron | 40.0% | |
| ATACGATTTCGCGACAATGT+TGG | + | chr3.2:15845524-15845543 | MS.gene83831:CDS | 40.0% | |
| ATCAATTTGGCAGGAAACTC+AGG | - | chr3.2:15842112-15842131 | None:intergenic | 40.0% | |
| ATCATGCTGCAACTGAAATC+AGG | - | chr3.2:15844463-15844482 | None:intergenic | 40.0% | |
| ATGCGACTTCTGTTACAATC+AGG | + | chr3.2:15842826-15842845 | MS.gene83831:intron | 40.0% | |
| ATTTCGCGACAATGTTGGAA+GGG | + | chr3.2:15845529-15845548 | MS.gene83831:CDS | 40.0% | |
| CAATGTGTTTGGCAGAATCA+CGG | - | chr3.2:15844730-15844749 | None:intergenic | 40.0% | |
| CAATGTGTTTGGCAGAATCT+CGG | - | chr3.2:15844632-15844651 | None:intergenic | 40.0% | |
| CCCTTAATTCTCAACCTATC+AGG | + | chr3.2:15845357-15845376 | MS.gene83831:CDS | 40.0% | |
| CCGAAGACTTGTATAGTTAC+CGG | - | chr3.2:15844195-15844214 | None:intergenic | 40.0% | |
| CCGGTAACTATACAAGTCTT+CGG | + | chr3.2:15844192-15844211 | MS.gene83831:intron | 40.0% | |
| CTATCATGAATGATGGCTGA+TGG | - | chr3.2:15845453-15845472 | None:intergenic | 40.0% | |
| CTTTGGTCCCTAAATGTTTG+AGG | - | chr3.2:15843625-15843644 | None:intergenic | 40.0% | |
| GAAAGATTCAATGACCGTGA+AGG | + | chr3.2:15843890-15843909 | MS.gene83831:CDS | 40.0% | |
| GAAATCAGGAAGAATGGATG+TGG | - | chr3.2:15844449-15844468 | None:intergenic | 40.0% | |
| GAGATGTGGCTTCTTATAGA+GGG | + | chr3.2:15841921-15841940 | MS.gene83831:CDS | 40.0% | |
| GATACCGCCTCAAACATTTA+GGG | + | chr3.2:15843615-15843634 | MS.gene83831:intron | 40.0% | |
| GCAAAATCTGCTACAAACTC+CGG | - | chr3.2:15845051-15845070 | None:intergenic | 40.0% | |
| GCAACTGAAATCAGGAAGAA+TGG | - | chr3.2:15844455-15844474 | None:intergenic | 40.0% | |
| GCTCGGATAATTTCCTATCA+AGG | - | chr3.2:15844142-15844161 | None:intergenic | 40.0% | |
| GTATGCACTGTCTTGACTAA+TGG | + | chr3.2:15844270-15844289 | MS.gene83831:intron | 40.0% | |
| GTCGTCACTATCATGAATGA+TGG | - | chr3.2:15845460-15845479 | None:intergenic | 40.0% | |
| GTTGAAGCAGAATGAGAACT+TGG | + | chr3.2:15843839-15843858 | MS.gene83831:CDS | 40.0% | |
| TATGCTTACCTCAACAAGCT+CGG | - | chr3.2:15844159-15844178 | None:intergenic | 40.0% | |
| TCAGTCTTGGGATTTCTCTT+GGG | + | chr3.2:15843763-15843782 | MS.gene83831:CDS | 40.0% | |
| TCTTCCTGCAAACTATGCAA+AGG | - | chr3.2:15844677-15844696 | None:intergenic | 40.0% | |
| TGATACCGCCTCAAACATTT+AGG | + | chr3.2:15843614-15843633 | MS.gene83831:intron | 40.0% | |
| TGGATAGGAATCAATTTGGC+AGG | - | chr3.2:15842121-15842140 | None:intergenic | 40.0% | |
| TGTGTTGAGAGTAACACTGT+TGG | + | chr3.2:15842769-15842788 | MS.gene83831:intron | 40.0% | |
| TTCAGTCTTGGGATTTCTCT+TGG | + | chr3.2:15843762-15843781 | MS.gene83831:CDS | 40.0% | |
| TTGGAGCTTCAACAAAAGCA+AGG | - | chr3.2:15844546-15844565 | None:intergenic | 40.0% | |
| ! | AGTTTGATCAGTGCATTGAC+TGG | + | chr3.2:15842355-15842374 | MS.gene83831:CDS | 40.0% |
| ! | ATAGGTTGAGAATTAAGGGC+TGG | - | chr3.2:15845356-15845375 | None:intergenic | 40.0% |
| ! | CATGATAGTGACGACAAAGA+AGG | + | chr3.2:15845465-15845484 | MS.gene83831:CDS | 40.0% |
| ! | GTTGTAGATGGTGATGAAAG+AGG | - | chr3.2:15842283-15842302 | None:intergenic | 40.0% |
| ! | TAGGTTGAGAATTAAGGGCT+GGG | - | chr3.2:15845355-15845374 | None:intergenic | 40.0% |
| ! | TGAATGTGATAATGAGGAGG+TGG | + | chr3.2:15845593-15845612 | MS.gene83831:CDS | 40.0% |
| ! | TGTGCTCTTGATAGTCAGTT+TGG | + | chr3.2:15843464-15843483 | MS.gene83831:intron | 40.0% |
| ! | TTTGCATAGTTTGCAGGAAG+AGG | + | chr3.2:15844676-15844695 | MS.gene83831:intron | 40.0% |
| ! | TTTGTAGCAGATTTTGCGCA+AGG | + | chr3.2:15845054-15845073 | MS.gene83831:CDS | 40.0% |
| ! | TTTTGAATTGCAGTCCGCAA+CGG | - | chr3.2:15842727-15842746 | None:intergenic | 40.0% |
| ! | TTTTGTGTCCGAAAGAGTTG+TGG | - | chr3.2:15842141-15842160 | None:intergenic | 40.0% |
| !! | CATGTTTGGGTTGGTGAATT+TGG | + | chr3.2:15844494-15844513 | MS.gene83831:intron | 40.0% |
| !! | GAAATTATCCGAGCTTGTTG+AGG | + | chr3.2:15844148-15844167 | MS.gene83831:CDS | 40.0% |
| !! | TACCTGCATTTCTAGTAGCA+GGG | + | chr3.2:15842854-15842873 | MS.gene83831:intron | 40.0% |
| !!! | ACGAGTAGTTTTGGCAATCA+TGG | + | chr3.2:15842076-15842095 | MS.gene83831:CDS | 40.0% |
| !!! | CGAGTAGTTTTGGCAATCAT+GGG | + | chr3.2:15842077-15842096 | MS.gene83831:CDS | 40.0% |
| !!! | TCTTGGTTACTTTTGCTCAC+AGG | + | chr3.2:15843217-15843236 | MS.gene83831:intron | 40.0% |
| AAAAGCAAGGTGGCACAATG+TGG | - | chr3.2:15844533-15844552 | None:intergenic | 45.0% | |
| AGCTTGAAGCTGAACTTGAG+AGG | + | chr3.2:15844090-15844109 | MS.gene83831:CDS | 45.0% | |
| AGGTGGAGAGGCTATTGATA+AGG | + | chr3.2:15845610-15845629 | MS.gene83831:CDS | 45.0% | |
| ATGCAGCTCCTTACCATTGA+AGG | - | chr3.2:15843961-15843980 | None:intergenic | 45.0% | |
| ATTCTCTGATGCGAGTTCCT+TGG | + | chr3.2:15841883-15841902 | MS.gene83831:CDS | 45.0% | |
| CATTCAGTGCATGTTTGGGT+TGG | + | chr3.2:15844485-15844504 | MS.gene83831:intron | 45.0% | |
| CGAGATTCTGCCAAACACAT+TGG | + | chr3.2:15844630-15844649 | MS.gene83831:intron | 45.0% | |
| CTTCAAGAGCTTCACCTGAT+AGG | - | chr3.2:15845374-15845393 | None:intergenic | 45.0% | |
| GAAGCTGAACTTGAGAGGTT+AGG | + | chr3.2:15844095-15844114 | MS.gene83831:CDS | 45.0% | |
| GAGCTTCAACAAAAGCAAGG+TGG | - | chr3.2:15844543-15844562 | None:intergenic | 45.0% | |
| GATTTCGCGACAATGTTGGA+AGG | + | chr3.2:15845528-15845547 | MS.gene83831:CDS | 45.0% | |
| GGAGATGTGGCTTCTTATAG+AGG | + | chr3.2:15841920-15841939 | MS.gene83831:CDS | 45.0% | |
| GGTGCAAAGCTAATTCTGAC+TGG | + | chr3.2:15842895-15842914 | MS.gene83831:intron | 45.0% | |
| GTTCCTTCCTTGCCCAAAAT+TGG | + | chr3.2:15842439-15842458 | MS.gene83831:CDS | 45.0% | |
| TCCTGCAAACTATGCAAAGG+TGG | - | chr3.2:15844674-15844693 | None:intergenic | 45.0% | |
| TGAACTTGAGAGGTTAGGGT+TGG | + | chr3.2:15844100-15844119 | MS.gene83831:CDS | 45.0% | |
| TGAATGCGTCAAGCCTTGAT+AGG | + | chr3.2:15844126-15844145 | MS.gene83831:CDS | 45.0% | |
| TGCAGTTGCACTCTCTGTTA+AGG | - | chr3.2:15844386-15844405 | None:intergenic | 45.0% | |
| TGGTCCCTAAATGTTTGAGG+CGG | - | chr3.2:15843622-15843641 | None:intergenic | 45.0% | |
| TGTCCGAAAGAGTTGTGGAT+AGG | - | chr3.2:15842136-15842155 | None:intergenic | 45.0% | |
| ! | AACAGAGAGTGCAACTGCAA+AGG | + | chr3.2:15844387-15844406 | MS.gene83831:intron | 45.0% |
| ! | ACTGCATAGTTTGCAGGAAG+AGG | - | chr3.2:15845129-15845148 | None:intergenic | 45.0% |
| ! | ATAGTTTGCAGGAAGAGGTG+TGG | + | chr3.2:15844681-15844700 | MS.gene83831:intron | 45.0% |
| ! | ATAGTTTGCAGGAAGAGGTG+TGG | - | chr3.2:15844700-15844681 | None:intergenic | 45.0% |
| ! | CTTTCACTCGTGTTTCGAGT+TGG | - | chr3.2:15845197-15845216 | None:intergenic | 45.0% |
| ! | CTTTTCCCTTTTCACGTCTC+CGG | - | chr3.2:15841829-15841848 | None:intergenic | 45.0% |
| ! | GATCCAATTTTGGGCAAGGA+AGG | - | chr3.2:15842445-15842464 | None:intergenic | 45.0% |
| ! | GGTGAAACTGCATAGTTTGC+AGG | - | chr3.2:15845135-15845154 | None:intergenic | 45.0% |
| ! | TAGGGGGAGAAGATTCCTTT+TGG | - | chr3.2:15845290-15845309 | None:intergenic | 45.0% |
| ! | TTTTCCCTTTTCACGTCTCC+GGG | - | chr3.2:15841828-15841847 | None:intergenic | 45.0% |
| !! | CAGTGCATTGACTGGAAGTA+AGG | + | chr3.2:15842363-15842382 | MS.gene83831:CDS | 45.0% |
| !! | CTACCTGCATTTCTAGTAGC+AGG | + | chr3.2:15842853-15842872 | MS.gene83831:intron | 45.0% |
| !!! | GGATTTTTAGGTCTCCGCAA+CGG | - | chr3.2:15842683-15842702 | None:intergenic | 45.0% |
| AAGGAATCTTCTCCCCCTAG+AGG | + | chr3.2:15845291-15845310 | MS.gene83831:CDS | 50.0% | |
| AGCTTTGCACCTGCTATTGC+AGG | - | chr3.2:15842886-15842905 | None:intergenic | 50.0% | |
| AGGTGAGTTTCGAGCTGACA+CGG | + | chr3.2:15845074-15845093 | MS.gene83831:CDS | 50.0% | |
| CACCCTGCTACTAGAAATGC+AGG | - | chr3.2:15842859-15842878 | None:intergenic | 50.0% | |
| CCAAGACTGAAGAGAAACGC+CGG | - | chr3.2:15843753-15843772 | None:intergenic | 50.0% | |
| CGGCGTTTCTCTTCAGTCTT+GGG | + | chr3.2:15843751-15843770 | MS.gene83831:CDS | 50.0% | |
| GAAGCCACATCTCCTGTTGA+AGG | - | chr3.2:15841914-15841933 | None:intergenic | 50.0% | |
| GCTGGAAAATGAGGCTAACG+CGG | + | chr3.2:15842649-15842668 | MS.gene83831:intron | 50.0% | |
| GGTTGTTTGCGGGAGGTTAA+GGG | - | chr3.2:15841806-15841825 | None:intergenic | 50.0% | |
| GTTGTTTGCGGGAGGTTAAG+GGG | - | chr3.2:15841805-15841824 | None:intergenic | 50.0% | |
| TAAGGGGCTGCTAAAGGACT+CGG | - | chr3.2:15841789-15841808 | None:intergenic | 50.0% | |
| TCCTGTTGAAGGACCATCCA+AGG | - | chr3.2:15841903-15841922 | None:intergenic | 50.0% | |
| TCCTTGGATGGTCCTTCAAC+AGG | + | chr3.2:15841899-15841918 | MS.gene83831:CDS | 50.0% | |
| TCTGATGCGAGTTCCTTGGA+TGG | + | chr3.2:15841887-15841906 | MS.gene83831:CDS | 50.0% | |
| TGGTCCTTCAACAGGAGATG+TGG | + | chr3.2:15841907-15841926 | MS.gene83831:CDS | 50.0% | |
| ! | AGGAAGAGGTGTGGTGACAT+TGG | - | chr3.2:15845115-15845134 | None:intergenic | 50.0% |
| ! | GACTATCAAGAGCACATGCG+AGG | - | chr3.2:15843460-15843479 | None:intergenic | 50.0% |
| ! | GCCACCTTTGCATAGTTTGC+AGG | + | chr3.2:15844670-15844689 | MS.gene83831:intron | 50.0% |
| ! | GTGATAATGAGGAGGTGGAG+AGG | + | chr3.2:15845598-15845617 | MS.gene83831:CDS | 50.0% |
| ! | TTTCCCTTTTCACGTCTCCG+GGG | - | chr3.2:15841827-15841846 | None:intergenic | 50.0% |
| !! | CAGTTGATGGACGAAGTCGA+AGG | + | chr3.2:15842497-15842516 | MS.gene83831:CDS | 50.0% |
| !! | CTGCATTTCTAGTAGCAGGG+TGG | + | chr3.2:15842857-15842876 | MS.gene83831:intron | 50.0% |
| !!! | TGGCTTGCAGCTGCTTTTAC+TGG | + | chr3.2:15841671-15841690 | MS.gene83831:CDS | 50.0% |
| ACAACCCCGGAGACGTGAAA+AGG | + | chr3.2:15841820-15841839 | MS.gene83831:CDS | 55.0% | |
| CAACCCCGGAGACGTGAAAA+GGG | + | chr3.2:15841821-15841840 | MS.gene83831:CDS | 55.0% | |
| CCGGCGTTTCTCTTCAGTCT+TGG | + | chr3.2:15843750-15843769 | MS.gene83831:CDS | 55.0% | |
| GGAGGTTAAGGGGCTGCTAA+AGG | - | chr3.2:15841795-15841814 | None:intergenic | 55.0% | |
| GGGTTGTTTGCGGGAGGTTA+AGG | - | chr3.2:15841807-15841826 | None:intergenic | 55.0% | |
| TAACCTCCCGCAAACAACCC+CGG | + | chr3.2:15841807-15841826 | MS.gene83831:CDS | 55.0% | |
| TGCAACTGCGATTGCCGTTG+CGG | + | chr3.2:15842710-15842729 | MS.gene83831:intron | 55.0% | |
| TTTCGAGCTGACACGGCTAG+TGG | + | chr3.2:15845081-15845100 | MS.gene83831:CDS | 55.0% | |
| ! | AGGAAGAGGTGTGGTACTCG+CGG | + | chr3.2:15844690-15844709 | MS.gene83831:intron | 55.0% |
| !!! | GCAGCTGCTTTTACTGGAGC+TGG | + | chr3.2:15841677-15841696 | MS.gene83831:CDS | 55.0% |
| ACGTCTCCGGGGTTGTTTGC+GGG | - | chr3.2:15841816-15841835 | None:intergenic | 60.0% | |
| CACGTCTCCGGGGTTGTTTG+CGG | - | chr3.2:15841817-15841836 | None:intergenic | 60.0% | |
| GGGTGGTGACCTGCAATAGC+AGG | + | chr3.2:15842874-15842893 | MS.gene83831:intron | 60.0% | |
| ! | GGAAGAGGTGTGGTACTCGC+GGG | + | chr3.2:15844691-15844710 | MS.gene83831:intron | 60.0% |
| ACGCGGTTGCGATGCCGTTG+CGG | + | chr3.2:15842666-15842685 | MS.gene83831:intron | 65.0% | |
| TCTCCGGGGTTGTTTGCGGG+AGG | - | chr3.2:15841813-15841832 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 15841662 | 15845725 | 15841662 | ID=MS.gene83831 |
| chr3.2 | mRNA | 15841662 | 15845725 | 15841662 | ID=MS.gene83831.t1;Parent=MS.gene83831 |
| chr3.2 | exon | 15841662 | 15842565 | 15841662 | ID=MS.gene83831.t1.exon1;Parent=MS.gene83831.t1 |
| chr3.2 | CDS | 15841662 | 15842565 | 15841662 | ID=cds.MS.gene83831.t1;Parent=MS.gene83831.t1 |
| chr3.2 | exon | 15843748 | 15844169 | 15843748 | ID=MS.gene83831.t1.exon2;Parent=MS.gene83831.t1 |
| chr3.2 | CDS | 15843748 | 15844169 | 15843748 | ID=cds.MS.gene83831.t1;Parent=MS.gene83831.t1 |
| chr3.2 | exon | 15845042 | 15845725 | 15845042 | ID=MS.gene83831.t1.exon3;Parent=MS.gene83831.t1 |
| chr3.2 | CDS | 15845042 | 15845725 | 15845042 | ID=cds.MS.gene83831.t1;Parent=MS.gene83831.t1 |
| Gene Sequence |
| Protein sequence |
