Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066433.t1 | XP_003627574.2 | 99.6 | 455 | 2 | 0 | 1 | 455 | 87 | 541 | 1.40E-260 | 908.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066433.t1 | Q0WMJ8 | 76.8 | 452 | 104 | 1 | 1 | 451 | 88 | 539 | 6.2e-204 | 711.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066433.t1 | A0A072TN00 | 99.6 | 455 | 2 | 0 | 1 | 455 | 1 | 455 | 1.0e-260 | 908.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene066433 | 0.827475 | 1.53E-54 | -1.69E-46 |
MS.gene049153 | MS.gene066433 | 0.810108 | 1.36E-50 | -1.69E-46 |
MS.gene049159 | MS.gene066433 | 0.823565 | 1.29E-53 | -1.69E-46 |
MS.gene049233 | MS.gene066433 | 0.816884 | 4.39E-52 | -1.69E-46 |
MS.gene049404 | MS.gene066433 | 0.817993 | 2.47E-52 | -1.69E-46 |
MS.gene049435 | MS.gene066433 | 0.858688 | 6.94E-63 | -1.69E-46 |
MS.gene049501 | MS.gene066433 | 0.817253 | 3.63E-52 | -1.69E-46 |
MS.gene050020 | MS.gene066433 | 0.80557 | 1.25E-49 | -1.69E-46 |
MS.gene05016 | MS.gene066433 | 0.813479 | 2.51E-51 | -1.69E-46 |
MS.gene050226 | MS.gene066433 | 0.828755 | 7.54E-55 | -1.69E-46 |
MS.gene050227 | MS.gene066433 | 0.825676 | 4.12E-54 | -1.69E-46 |
MS.gene050228 | MS.gene066433 | 0.826759 | 2.27E-54 | -1.69E-46 |
MS.gene050251 | MS.gene066433 | 0.804712 | 1.89E-49 | -1.69E-46 |
MS.gene050376 | MS.gene066433 | 0.822684 | 2.08E-53 | -1.69E-46 |
MS.gene050442 | MS.gene066433 | 0.873477 | 1.43E-67 | -1.69E-46 |
MS.gene050558 | MS.gene066433 | 0.806439 | 8.22E-50 | -1.69E-46 |
MS.gene050586 | MS.gene066433 | 0.823793 | 1.14E-53 | -1.69E-46 |
MS.gene050680 | MS.gene066433 | 0.842417 | 2.62E-58 | -1.69E-46 |
MS.gene050759 | MS.gene066433 | 0.81573 | 7.96E-52 | -1.69E-46 |
MS.gene050762 | MS.gene066433 | 0.80644 | 8.22E-50 | -1.69E-46 |
MS.gene050763 | MS.gene066433 | 0.80653 | 7.87E-50 | -1.69E-46 |
MS.gene050780 | MS.gene066433 | 0.802076 | 6.66E-49 | -1.69E-46 |
MS.gene050787 | MS.gene066433 | 0.830573 | 2.72E-55 | -1.69E-46 |
MS.gene050807 | MS.gene066433 | 0.839411 | 1.61E-57 | -1.69E-46 |
MS.gene050808 | MS.gene066433 | 0.806648 | 7.43E-50 | -1.69E-46 |
MS.gene050826 | MS.gene066433 | 0.812126 | 4.96E-51 | -1.69E-46 |
MS.gene050844 | MS.gene066433 | 0.814207 | 1.73E-51 | -1.69E-46 |
MS.gene050959 | MS.gene066433 | 0.819365 | 1.21E-52 | -1.69E-46 |
MS.gene050962 | MS.gene066433 | 0.809404 | 1.92E-50 | -1.69E-46 |
MS.gene051180 | MS.gene066433 | 0.807003 | 6.25E-50 | -1.69E-46 |
MS.gene051265 | MS.gene066433 | 0.857568 | 1.49E-62 | -1.69E-46 |
MS.gene051344 | MS.gene066433 | 0.807016 | 6.21E-50 | -1.69E-46 |
MS.gene051568 | MS.gene066433 | 0.80905 | 2.29E-50 | -1.69E-46 |
MS.gene051800 | MS.gene066433 | 0.826053 | 3.35E-54 | -1.69E-46 |
MS.gene051860 | MS.gene066433 | 0.826113 | 3.24E-54 | -1.69E-46 |
MS.gene052012 | MS.gene066433 | 0.804743 | 1.87E-49 | -1.69E-46 |
MS.gene052020 | MS.gene066433 | 0.851224 | 1.02E-60 | -1.69E-46 |
MS.gene052190 | MS.gene066433 | 0.856836 | 2.46E-62 | -1.69E-46 |
MS.gene052323 | MS.gene066433 | 0.816042 | 6.78E-52 | -1.69E-46 |
MS.gene052333 | MS.gene066433 | 0.841991 | 3.40E-58 | -1.69E-46 |
MS.gene052611 | MS.gene066433 | 0.81353 | 2.44E-51 | -1.69E-46 |
MS.gene052665 | MS.gene066433 | 0.818807 | 1.62E-52 | -1.69E-46 |
MS.gene052896 | MS.gene066433 | 0.801238 | 9.90E-49 | -1.69E-46 |
MS.gene053074 | MS.gene066433 | 0.808179 | 3.52E-50 | -1.69E-46 |
MS.gene053147 | MS.gene066433 | 0.850033 | 2.21E-60 | -1.69E-46 |
MS.gene053166 | MS.gene066433 | 0.852974 | 3.25E-61 | -1.69E-46 |
MS.gene053184 | MS.gene066433 | 0.807097 | 5.97E-50 | -1.69E-46 |
MS.gene053201 | MS.gene066433 | 0.80229 | 6.02E-49 | -1.69E-46 |
MS.gene053221 | MS.gene066433 | 0.825726 | 4.01E-54 | -1.69E-46 |
MS.gene053584 | MS.gene066433 | 0.82563 | 4.22E-54 | -1.69E-46 |
MS.gene053811 | MS.gene066433 | 0.817162 | 3.81E-52 | -1.69E-46 |
MS.gene053966 | MS.gene066433 | 0.805 | 1.65E-49 | -1.69E-46 |
MS.gene05414 | MS.gene066433 | 0.804285 | 2.33E-49 | -1.69E-46 |
MS.gene05417 | MS.gene066433 | 0.808311 | 3.30E-50 | -1.69E-46 |
MS.gene054236 | MS.gene066433 | 0.813608 | 2.35E-51 | -1.69E-46 |
MS.gene054291 | MS.gene066433 | -0.812108 | 5.00E-51 | -1.69E-46 |
MS.gene054379 | MS.gene066433 | 0.813911 | 2.01E-51 | -1.69E-46 |
MS.gene054467 | MS.gene066433 | 0.876452 | 1.38E-68 | -1.69E-46 |
MS.gene054468 | MS.gene066433 | 0.855719 | 5.22E-62 | -1.69E-46 |
MS.gene054559 | MS.gene066433 | 0.827178 | 1.81E-54 | -1.69E-46 |
MS.gene054581 | MS.gene066433 | 0.841768 | 3.89E-58 | -1.69E-46 |
MS.gene05468 | MS.gene066433 | 0.802629 | 5.12E-49 | -1.69E-46 |
MS.gene054775 | MS.gene066433 | 0.804912 | 1.72E-49 | -1.69E-46 |
MS.gene05510 | MS.gene066433 | 0.808973 | 2.38E-50 | -1.69E-46 |
MS.gene055227 | MS.gene066433 | 0.819427 | 1.17E-52 | -1.69E-46 |
MS.gene055356 | MS.gene066433 | 0.886551 | 3.10E-72 | -1.69E-46 |
MS.gene055357 | MS.gene066433 | 0.842386 | 2.67E-58 | -1.69E-46 |
MS.gene055358 | MS.gene066433 | 0.872997 | 2.07E-67 | -1.69E-46 |
MS.gene055608 | MS.gene066433 | 0.80579 | 1.13E-49 | -1.69E-46 |
MS.gene055701 | MS.gene066433 | 0.831302 | 1.80E-55 | -1.69E-46 |
MS.gene055804 | MS.gene066433 | 0.801498 | 8.75E-49 | -1.69E-46 |
MS.gene055818 | MS.gene066433 | 0.834958 | 2.22E-56 | -1.69E-46 |
MS.gene055926 | MS.gene066433 | 0.846207 | 2.51E-59 | -1.69E-46 |
MS.gene05595 | MS.gene066433 | 0.802358 | 5.83E-49 | -1.69E-46 |
MS.gene05604 | MS.gene066433 | 0.810275 | 1.25E-50 | -1.69E-46 |
MS.gene056173 | MS.gene066433 | 0.860642 | 1.79E-63 | -1.69E-46 |
MS.gene056506 | MS.gene066433 | 0.822594 | 2.18E-53 | -1.69E-46 |
MS.gene056553 | MS.gene066433 | 0.822044 | 2.92E-53 | -1.69E-46 |
MS.gene056875 | MS.gene066433 | 0.823295 | 1.50E-53 | -1.69E-46 |
MS.gene057012 | MS.gene066433 | 0.800678 | 1.29E-48 | -1.69E-46 |
MS.gene057060 | MS.gene066433 | 0.821178 | 4.64E-53 | -1.69E-46 |
MS.gene057394 | MS.gene066433 | 0.811761 | 5.96E-51 | -1.69E-46 |
MS.gene057469 | MS.gene066433 | 0.851883 | 6.64E-61 | -1.69E-46 |
MS.gene05761 | MS.gene066433 | 0.824844 | 6.48E-54 | -1.69E-46 |
MS.gene057693 | MS.gene066433 | 0.802794 | 4.74E-49 | -1.69E-46 |
MS.gene057750 | MS.gene066433 | 0.827832 | 1.26E-54 | -1.69E-46 |
MS.gene057869 | MS.gene066433 | 0.851684 | 7.56E-61 | -1.69E-46 |
MS.gene057929 | MS.gene066433 | 0.803603 | 3.22E-49 | -1.69E-46 |
MS.gene058010 | MS.gene066433 | 0.812439 | 4.24E-51 | -1.69E-46 |
MS.gene058168 | MS.gene066433 | 0.820424 | 6.91E-53 | -1.69E-46 |
MS.gene058625 | MS.gene066433 | 0.807643 | 4.57E-50 | -1.69E-46 |
MS.gene059124 | MS.gene066433 | 0.814188 | 1.75E-51 | -1.69E-46 |
MS.gene059128 | MS.gene066433 | 0.841074 | 5.92E-58 | -1.69E-46 |
MS.gene059607 | MS.gene066433 | 0.840908 | 6.55E-58 | -1.69E-46 |
MS.gene059609 | MS.gene066433 | 0.835592 | 1.53E-56 | -1.69E-46 |
MS.gene059725 | MS.gene066433 | 0.811023 | 8.61E-51 | -1.69E-46 |
MS.gene059789 | MS.gene066433 | 0.806924 | 6.49E-50 | -1.69E-46 |
MS.gene059863 | MS.gene066433 | 0.802335 | 5.89E-49 | -1.69E-46 |
MS.gene060011 | MS.gene066433 | 0.808404 | 3.15E-50 | -1.69E-46 |
MS.gene060137 | MS.gene066433 | -0.85246 | 4.55E-61 | -1.69E-46 |
MS.gene060167 | MS.gene066433 | 0.810216 | 1.29E-50 | -1.69E-46 |
MS.gene060312 | MS.gene066433 | 0.814844 | 1.25E-51 | -1.69E-46 |
MS.gene060322 | MS.gene066433 | 0.827938 | 1.19E-54 | -1.69E-46 |
MS.gene06052 | MS.gene066433 | 0.809108 | 2.23E-50 | -1.69E-46 |
MS.gene060637 | MS.gene066433 | 0.80238 | 5.77E-49 | -1.69E-46 |
MS.gene060683 | MS.gene066433 | 0.832185 | 1.09E-55 | -1.69E-46 |
MS.gene060685 | MS.gene066433 | 0.830438 | 2.94E-55 | -1.69E-46 |
MS.gene060802 | MS.gene066433 | 0.845382 | 4.21E-59 | -1.69E-46 |
MS.gene060803 | MS.gene066433 | 0.856586 | 2.91E-62 | -1.69E-46 |
MS.gene060918 | MS.gene066433 | 0.817716 | 2.85E-52 | -1.69E-46 |
MS.gene060998 | MS.gene066433 | 0.820213 | 7.73E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene066433 | MS.gene66501 | PPI |
MS.gene066433 | MS.gene54352 | PPI |
MS.gene066433 | MS.gene81179 | PPI |
MS.gene066433 | MS.gene000692 | PPI |
MS.gene066433 | MS.gene33224 | PPI |
MS.gene066433 | MS.gene97784 | PPI |
MS.gene066433 | MS.gene000340 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066433.t1 | MTR_8g030680 | 99.560 | 455 | 2 | 0 | 1 | 455 | 87 | 541 | 0.0 | 929 |
MS.gene066433.t1 | MTR_8g030680 | 99.560 | 455 | 2 | 0 | 1 | 455 | 1 | 455 | 0.0 | 928 |
MS.gene066433.t1 | MTR_7g077800 | 82.418 | 455 | 78 | 2 | 1 | 454 | 84 | 537 | 0.0 | 773 |
MS.gene066433.t1 | MTR_7g077800 | 82.000 | 400 | 70 | 2 | 56 | 454 | 1 | 399 | 0.0 | 673 |
MS.gene066433.t1 | MTR_6g463340 | 71.397 | 451 | 126 | 2 | 1 | 450 | 89 | 537 | 0.0 | 665 |
MS.gene066433.t1 | MTR_6g463340 | 72.390 | 431 | 116 | 2 | 21 | 450 | 1 | 429 | 0.0 | 640 |
MS.gene066433.t1 | MTR_7g077800 | 83.152 | 368 | 60 | 2 | 1 | 367 | 84 | 450 | 0.0 | 619 |
MS.gene066433.t1 | MTR_7g077800 | 78.930 | 299 | 61 | 2 | 1 | 298 | 84 | 381 | 5.39e-166 | 473 |
MS.gene066433.t1 | MTR_7g405780 | 51.487 | 437 | 207 | 3 | 2 | 436 | 93 | 526 | 2.62e-154 | 449 |
MS.gene066433.t1 | MTR_7g405780 | 51.313 | 419 | 199 | 3 | 2 | 418 | 93 | 508 | 8.63e-148 | 431 |
MS.gene066433.t1 | MTR_1g116953 | 47.235 | 434 | 222 | 4 | 4 | 434 | 80 | 509 | 1.33e-140 | 413 |
MS.gene066433.t1 | MTR_7g405780 | 50.681 | 367 | 176 | 3 | 2 | 366 | 93 | 456 | 1.33e-125 | 372 |
MS.gene066433.t1 | MTR_7g405780 | 50.549 | 364 | 175 | 3 | 2 | 363 | 93 | 453 | 5.94e-124 | 368 |
MS.gene066433.t1 | MTR_1g100980 | 24.870 | 386 | 206 | 14 | 116 | 452 | 19 | 369 | 8.03e-23 | 100 |
MS.gene066433.t1 | MTR_3g109932 | 31.959 | 194 | 117 | 5 | 262 | 455 | 161 | 339 | 8.63e-21 | 93.6 |
MS.gene066433.t1 | MTR_3g109932 | 35.897 | 156 | 85 | 5 | 262 | 417 | 161 | 301 | 3.48e-20 | 91.3 |
MS.gene066433.t1 | MTR_1g008280 | 31.500 | 200 | 118 | 6 | 252 | 451 | 155 | 335 | 1.91e-19 | 89.7 |
MS.gene066433.t1 | MTR_1g008280 | 30.144 | 209 | 118 | 7 | 252 | 451 | 155 | 344 | 7.95e-17 | 82.0 |
MS.gene066433.t1 | MTR_1g008280 | 31.293 | 147 | 83 | 5 | 252 | 398 | 155 | 283 | 1.78e-13 | 71.2 |
MS.gene066433.t1 | MTR_3g109968 | 33.333 | 111 | 71 | 2 | 345 | 455 | 25 | 132 | 2.24e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066433.t1 | AT1G01650 | 76.770 | 452 | 104 | 1 | 1 | 451 | 88 | 539 | 0.0 | 729 |
MS.gene066433.t1 | AT1G63690 | 74.833 | 449 | 111 | 1 | 2 | 450 | 90 | 536 | 0.0 | 694 |
MS.gene066433.t1 | AT1G63690 | 74.610 | 449 | 112 | 1 | 2 | 450 | 90 | 536 | 0.0 | 692 |
MS.gene066433.t1 | AT1G01650 | 76.574 | 397 | 92 | 1 | 56 | 451 | 1 | 397 | 0.0 | 635 |
MS.gene066433.t1 | AT1G01650 | 76.574 | 397 | 92 | 1 | 56 | 451 | 1 | 397 | 0.0 | 635 |
MS.gene066433.t1 | AT1G01650 | 76.574 | 397 | 92 | 1 | 56 | 451 | 1 | 397 | 0.0 | 635 |
MS.gene066433.t1 | AT2G43070 | 49.438 | 445 | 220 | 3 | 3 | 444 | 92 | 534 | 3.16e-144 | 423 |
MS.gene066433.t1 | AT2G43070 | 49.438 | 445 | 220 | 3 | 3 | 444 | 151 | 593 | 2.02e-143 | 423 |
MS.gene066433.t1 | AT2G43070 | 49.002 | 451 | 219 | 4 | 3 | 444 | 92 | 540 | 1.36e-142 | 419 |
MS.gene066433.t1 | AT2G43070 | 49.002 | 451 | 219 | 4 | 3 | 444 | 151 | 599 | 7.69e-142 | 419 |
MS.gene066433.t1 | AT1G05820 | 45.033 | 453 | 242 | 3 | 1 | 451 | 86 | 533 | 1.28e-130 | 388 |
MS.gene066433.t1 | AT1G05820 | 46.062 | 419 | 222 | 2 | 1 | 417 | 86 | 502 | 6.95e-126 | 375 |
MS.gene066433.t1 | AT1G05820 | 45.477 | 398 | 210 | 3 | 56 | 451 | 1 | 393 | 1.89e-120 | 357 |
MS.gene066433.t1 | AT1G05820 | 41.745 | 321 | 183 | 2 | 1 | 319 | 86 | 404 | 9.96e-77 | 246 |
MS.gene066433.t1 | AT4G33410 | 25.000 | 328 | 178 | 10 | 155 | 433 | 47 | 355 | 9.79e-24 | 102 |
MS.gene066433.t1 | AT2G03120 | 33.684 | 190 | 111 | 5 | 262 | 451 | 161 | 335 | 1.82e-22 | 98.6 |
Find 100 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATGAGGACAATGCCTTTC+TGG | 0.135793 | 8.1:-72207829 | None:intergenic |
CGTGCTTGCTTCTTGTTTCT+TGG | 0.199556 | 8.1:+72204983 | MS.gene066433:CDS |
CTTTCTTATATGACATCTTA+TGG | 0.212778 | 8.1:+72205814 | MS.gene066433:CDS |
TTATACTTACCAAGTGTAAA+TGG | 0.235488 | 8.1:-72206962 | None:intergenic |
GTTACAGCATCATTGGTTTC+GGG | 0.276829 | 8.1:+72206078 | MS.gene066433:CDS |
ACTCAAAATACCTTATTCTT+AGG | 0.281740 | 8.1:-72203826 | None:intergenic |
GCTCACCAATGAGATCATTT+TGG | 0.282959 | 8.1:+72203982 | MS.gene066433:intron |
GGTTACAGCATCATTGGTTT+CGG | 0.284269 | 8.1:+72206077 | MS.gene066433:CDS |
CTTCTTTCCCAACGACAAAA+AGG | 0.287834 | 8.1:-72207770 | None:intergenic |
ACCACGTTTGTTTGATCCTT+GGG | 0.292106 | 8.1:+72206052 | MS.gene066433:CDS |
ATATGTCGCTTTAAACTTGA+TGG | 0.299572 | 8.1:+72206904 | MS.gene066433:CDS |
TATGTCAAGATACCGTTCTT+TGG | 0.299611 | 8.1:+72205317 | MS.gene066433:CDS |
CATAGTATTTGCAGTGGTTT+GGG | 0.300952 | 8.1:+72205379 | MS.gene066433:CDS |
GCATAGTATTTGCAGTGGTT+TGG | 0.301464 | 8.1:+72205378 | MS.gene066433:CDS |
TGGAATCATACCTTGAGATT+TGG | 0.328219 | 8.1:-72205589 | None:intergenic |
TATGGGTGTTCGTTTCTAAA+TGG | 0.328930 | 8.1:+72205832 | MS.gene066433:CDS |
CCAATAAGAAGCACATAAAA+TGG | 0.329319 | 8.1:-72204611 | None:intergenic |
GTTCTGGTTTCTTGAAGTTC+TGG | 0.330899 | 8.1:+72205028 | MS.gene066433:CDS |
ATCAATGTTGGTTAATTGAT+TGG | 0.335483 | 8.1:-72207864 | None:intergenic |
TGGGGTGGTTACAGCATCAT+TGG | 0.340318 | 8.1:+72206071 | MS.gene066433:CDS |
TGTACAAATTAATGTCGTTC+TGG | 0.347090 | 8.1:+72205012 | MS.gene066433:CDS |
TTTCTTATATGACATCTTAT+GGG | 0.349788 | 8.1:+72205815 | MS.gene066433:CDS |
GTGTGGGCAATGACTGCTTA+TGG | 0.356128 | 8.1:+72206574 | MS.gene066433:CDS |
TTGTAGCAAGCCTAAGAATA+AGG | 0.358188 | 8.1:+72203816 | MS.gene066433:CDS |
GTGCTTCTTATTGGTCTGCT+TGG | 0.367692 | 8.1:+72204620 | MS.gene066433:CDS |
TTTCGGGGACATTATCTTAC+CGG | 0.373048 | 8.1:+72206094 | MS.gene066433:CDS |
TACCACGTTTGTTTGATCCT+TGG | 0.389231 | 8.1:+72206051 | MS.gene066433:CDS |
TGGTTAACTTCTTCAATATG+AGG | 0.390926 | 8.1:-72207844 | None:intergenic |
TAAGGGTCTACAAACTTGTT+TGG | 0.401736 | 8.1:+72205160 | MS.gene066433:intron |
TTTCTCTGCACAGGTAGCTC+GGG | 0.403689 | 8.1:+72205986 | MS.gene066433:intron |
TTGCTCAATAGCAGCTTCTC+TGG | 0.407570 | 8.1:-72204647 | None:intergenic |
TTAGGCTTGCTACAACAATC+AGG | 0.422579 | 8.1:-72203808 | None:intergenic |
TTCATCAGCTATATTTGCCT+TGG | 0.424615 | 8.1:-72204032 | None:intergenic |
GTTTGGCGGCTCTATTATCA+TGG | 0.437582 | 8.1:+72205177 | MS.gene066433:CDS |
ACAAGATGCTGGATTAAACT+TGG | 0.448478 | 8.1:+72204340 | MS.gene066433:CDS |
GTACTCTCCACTTCGTCCAT+TGG | 0.449661 | 8.1:+72204546 | MS.gene066433:CDS |
GCAATGACTGCTTATGGTCT+AGG | 0.461735 | 8.1:+72206580 | MS.gene066433:CDS |
GTTATGCTTCCACAAGATGC+TGG | 0.462553 | 8.1:+72204329 | MS.gene066433:CDS |
GTAACAGCAAGTGTCAGATA+TGG | 0.481241 | 8.1:-72205347 | None:intergenic |
ATCTTGACATATGTTTGTGC+AGG | 0.481494 | 8.1:-72205305 | None:intergenic |
TATACTTACCAAGTGTAAAT+GGG | 0.486632 | 8.1:-72206961 | None:intergenic |
GTGCACCAAAATGATCTCAT+TGG | 0.493592 | 8.1:-72203987 | None:intergenic |
CAAGTTATTGTAGTTTCAGA+TGG | 0.495005 | 8.1:+72205273 | MS.gene066433:intron |
GGGTCTACAAACTTGTTTGG+CGG | 0.497353 | 8.1:+72205163 | MS.gene066433:intron |
CAAGCATCATACGCGTGGAT+TGG | 0.501545 | 8.1:+72205413 | MS.gene066433:CDS |
CTATATAGAGCAAAGCTGGC+TGG | 0.507003 | 8.1:-72206937 | None:intergenic |
TTCGGGGACATTATCTTACC+GGG | 0.511477 | 8.1:+72206095 | MS.gene066433:CDS |
GATGAGGATGGCTGAAGCAC+CGG | 0.516902 | 8.1:-72204056 | None:intergenic |
CTCATCATAAACTATCGTAC+AGG | 0.518541 | 8.1:+72204073 | MS.gene066433:CDS |
TCGTCCATTGGTTGATGTTG+CGG | 0.521538 | 8.1:+72204558 | MS.gene066433:CDS |
CTGGTTTCTTGAAGTTCTGG+TGG | 0.522153 | 8.1:+72205031 | MS.gene066433:CDS |
AAGTGGAGAGTACAACTGTA+TGG | 0.524238 | 8.1:-72204536 | None:intergenic |
GCAAAGAAGAACCTCCGAGC+TGG | 0.526351 | 8.1:+72206544 | MS.gene066433:CDS |
GGGACTATATAGAGCAAAGC+TGG | 0.526557 | 8.1:-72206941 | None:intergenic |
GGGTGTTCGTTTCTAAATGG+TGG | 0.527404 | 8.1:+72205835 | MS.gene066433:CDS |
AAGTTTAATCCAGCATCTTG+TGG | 0.531321 | 8.1:-72204338 | None:intergenic |
GTCGCTTTAAACTTGATGGA+TGG | 0.538119 | 8.1:+72206908 | MS.gene066433:CDS |
TCATGAGAGCGTGATGATAG+TGG | 0.543810 | 8.1:+72205860 | MS.gene066433:CDS |
CGTGGTAACTTGAGAAGCAT+GGG | 0.546674 | 8.1:-72206035 | None:intergenic |
CACTGCAAATACTATGCAGA+AGG | 0.550804 | 8.1:-72205372 | None:intergenic |
AATGAAACTGATGTTGACAT+TGG | 0.558103 | 8.1:+72204296 | MS.gene066433:CDS |
GAAAATGCTACTACAAGTCC+CGG | 0.560919 | 8.1:-72206113 | None:intergenic |
ACGTGGTAACTTGAGAAGCA+TGG | 0.564772 | 8.1:-72206036 | None:intergenic |
GCAAATATAGCTGATGAAGC+CGG | 0.576888 | 8.1:+72204037 | MS.gene066433:CDS |
CCACGTTTGTTTGATCCTTG+GGG | 0.578234 | 8.1:+72206053 | MS.gene066433:CDS |
GCAGAAAGTGTTGGTTCTCG+TGG | 0.579848 | 8.1:+72204921 | MS.gene066433:CDS |
TGTTGGTTCTCGTGGTTACG+TGG | 0.588787 | 8.1:+72204929 | MS.gene066433:CDS |
TATATAGTCCCATTTACACT+TGG | 0.589134 | 8.1:+72206953 | MS.gene066433:CDS |
GGACAAGAGGAGAACCAGAA+AGG | 0.592548 | 8.1:+72207815 | MS.gene066433:CDS |
CTTCTGCATAGTATTTGCAG+TGG | 0.594852 | 8.1:+72205373 | MS.gene066433:CDS |
AATCTGCTGAAGATCAATGT+TGG | 0.596723 | 8.1:-72207876 | None:intergenic |
CGTTTGTTTGATCCTTGGGG+TGG | 0.597198 | 8.1:+72206056 | MS.gene066433:CDS |
TTCTCTGCACAGGTAGCTCG+GGG | 0.597507 | 8.1:+72205987 | MS.gene066433:intron |
TCCGAGCTGGATATTTCGTG+TGG | 0.598486 | 8.1:+72206557 | MS.gene066433:CDS |
TTGTCGTTGGGAAAGAAGAG+AGG | 0.603580 | 8.1:+72207775 | MS.gene066433:CDS |
TCTTGTGGAAGCATAACAGC+AGG | 0.606664 | 8.1:-72204323 | None:intergenic |
TTACAGCATCATTGGTTTCG+GGG | 0.610146 | 8.1:+72206079 | MS.gene066433:CDS |
CCCACACGAAATATCCAGCT+CGG | 0.612171 | 8.1:-72206558 | None:intergenic |
TGTTCGCATACCAAATCTCA+AGG | 0.612517 | 8.1:+72205579 | MS.gene066433:CDS |
AGTATTTGCAGTGGTTTGGG+CGG | 0.612976 | 8.1:+72205382 | MS.gene066433:CDS |
AGCAAGTGTCAGATATGGAA+CGG | 0.613995 | 8.1:-72205342 | None:intergenic |
GAATATGTTGCAGAAAGTGT+TGG | 0.615196 | 8.1:+72204912 | MS.gene066433:CDS |
ACATCAACCAATGGACGAAG+TGG | 0.617248 | 8.1:-72204553 | None:intergenic |
TATGGAACGGCTCCAAAGAA+CGG | 0.619684 | 8.1:-72205329 | None:intergenic |
AAAATGTAGTTTCACAACCA+AGG | 0.628218 | 8.1:+72204015 | MS.gene066433:CDS |
CACATACAAAATAACTCCAT+AGG | 0.631134 | 8.1:+72204368 | MS.gene066433:CDS |
GGTGATAAGAGTGGAGAAGA+CGG | 0.633523 | 8.1:+72206008 | MS.gene066433:CDS |
AACGACAAGCATCATACGCG+TGG | 0.636572 | 8.1:+72205408 | MS.gene066433:CDS |
TTAAACTTGATGGATGGACA+TGG | 0.640581 | 8.1:+72206914 | MS.gene066433:CDS |
GTAGCTCGGGGTGATAAGAG+TGG | 0.642633 | 8.1:+72205999 | MS.gene066433:CDS |
TTAAAGCGACATATGTGATG+AGG | 0.646719 | 8.1:-72206895 | None:intergenic |
ACTTCCGCAACATCAACCAA+TGG | 0.654114 | 8.1:-72204562 | None:intergenic |
CTGTACGATAGTTTATGATG+AGG | 0.659345 | 8.1:-72204072 | None:intergenic |
ACGATAGTTTATGATGAGGA+TGG | 0.661175 | 8.1:-72204068 | None:intergenic |
CCGAGCTGGATATTTCGTGT+GGG | 0.666995 | 8.1:+72206558 | MS.gene066433:CDS |
ACTGCAAATACTATGCAGAA+GGG | 0.683125 | 8.1:-72205371 | None:intergenic |
CCCCAAGGATCAAACAAACG+TGG | 0.683397 | 8.1:-72206053 | None:intergenic |
GGCTTGCTACAACAATCAGG+AGG | 0.689982 | 8.1:-72203805 | None:intergenic |
ATGATGCTGTAACCACCCCA+AGG | 0.696121 | 8.1:-72206068 | None:intergenic |
ACACGAAATATCCAGCTCGG+AGG | 0.740591 | 8.1:-72206555 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTACATTAAAATGT+AGG | - | chr8.1:72206378-72206397 | None:intergenic | 10.0% |
!! | ATAAAAAACTGAAATAATGA+TGG | - | chr8.1:72206819-72206838 | None:intergenic | 15.0% |
!! | ATTAAGATAGATTATAGAAA+CGG | - | chr8.1:72206280-72206299 | None:intergenic | 15.0% |
!! | TATTTATAAACTCGTTAATT+TGG | + | chr8.1:72204844-72204863 | MS.gene066433:intron | 15.0% |
!!! | TAAGTTCTTATTTACATATA+TGG | + | chr8.1:72207496-72207515 | MS.gene066433:intron | 15.0% |
!!! | TTTCAGTTTTTTATAGTAAT+CGG | + | chr8.1:72206825-72206844 | MS.gene066433:intron | 15.0% |
!! | AAATTTAGAGACGAAAAAAT+AGG | + | chr8.1:72206715-72206734 | MS.gene066433:intron | 20.0% |
!! | ATAAAATTGGTCATCAAATT+TGG | - | chr8.1:72206779-72206798 | None:intergenic | 20.0% |
!! | ATAACAGTATTAAAAGTCTA+GGG | - | chr8.1:72205501-72205520 | None:intergenic | 20.0% |
!! | ATGAACATACAAATATTAGA+GGG | - | chr8.1:72205134-72205153 | None:intergenic | 20.0% |
!! | CTATTCTTCAATGTATTATT+TGG | + | chr8.1:72207031-72207050 | MS.gene066433:intron | 20.0% |
!! | TATGAACATACAAATATTAG+AGG | - | chr8.1:72205135-72205154 | None:intergenic | 20.0% |
!! | TTTCAAATTTATGAGTAAGA+TGG | - | chr8.1:72206988-72207007 | None:intergenic | 20.0% |
!! | TTTCTTATATGACATCTTAT+GGG | + | chr8.1:72205815-72205834 | MS.gene066433:CDS | 20.0% |
!!! | AATTAGTTGTTGATTTTCTT+TGG | + | chr8.1:72204427-72204446 | MS.gene066433:intron | 20.0% |
!!! | TATATTTCTATCTTCACTTA+TGG | + | chr8.1:72206662-72206681 | MS.gene066433:intron | 20.0% |
!!! | TATCTTTTAGTGTGAAAAAA+TGG | - | chr8.1:72204709-72204728 | None:intergenic | 20.0% |
!!! | TGATATATGGATAACTTTTA+TGG | + | chr8.1:72204871-72204890 | MS.gene066433:intron | 20.0% |
!!! | TTAATTTGGTTACTGATATA+TGG | + | chr8.1:72204858-72204877 | MS.gene066433:intron | 20.0% |
!!! | TTCTTATTTACATATATGGA+TGG | + | chr8.1:72207500-72207519 | MS.gene066433:intron | 20.0% |
! | AAAATGTCACACTAACTTTA+AGG | - | chr8.1:72205969-72205988 | None:intergenic | 25.0% |
! | AAATAGAGACAAACAATAAC+CGG | + | chr8.1:72204783-72204802 | MS.gene066433:intron | 25.0% |
! | AATAATAAAGCTTTCGATCT+TGG | - | chr8.1:72203909-72203928 | None:intergenic | 25.0% |
! | ACTCAAAATACCTTATTCTT+AGG | - | chr8.1:72203829-72203848 | None:intergenic | 25.0% |
! | ATAATAATAAGATGACCAGA+AGG | - | chr8.1:72206182-72206201 | None:intergenic | 25.0% |
! | ATACAAAATGTGAATGTCTA+CGG | + | chr8.1:72206633-72206652 | MS.gene066433:intron | 25.0% |
! | ATGTGAACAGATCATATTAA+TGG | - | chr8.1:72207104-72207123 | None:intergenic | 25.0% |
! | ATTGTACTGTATCATGTTAA+CGG | + | chr8.1:72206468-72206487 | MS.gene066433:intron | 25.0% |
! | CTCATTTACAATGAAATAAC+CGG | + | chr8.1:72207247-72207266 | MS.gene066433:intron | 25.0% |
! | CTTTCTTATATGACATCTTA+TGG | + | chr8.1:72205814-72205833 | MS.gene066433:CDS | 25.0% |
! | GATAACAGTATTAAAAGTCT+AGG | - | chr8.1:72205502-72205521 | None:intergenic | 25.0% |
! | GATCATACAATATATGTATC+TGG | + | chr8.1:72206156-72206175 | MS.gene066433:intron | 25.0% |
! | TATACTTACCAAGTGTAAAT+GGG | - | chr8.1:72206964-72206983 | None:intergenic | 25.0% |
! | TCAATTCGGATAGAAATAAT+AGG | - | chr8.1:72205250-72205269 | None:intergenic | 25.0% |
! | TGTATGTTCATATGCTTTAA+GGG | + | chr8.1:72205143-72205162 | MS.gene066433:intron | 25.0% |
! | TTATACTTACCAAGTGTAAA+TGG | - | chr8.1:72206965-72206984 | None:intergenic | 25.0% |
! | TTGTATGTTCATATGCTTTA+AGG | + | chr8.1:72205142-72205161 | MS.gene066433:intron | 25.0% |
! | TTTCACATATACTTCTTTCT+TGG | + | chr8.1:72205760-72205779 | MS.gene066433:intron | 25.0% |
!! | ACTGAAATAATGATGGAAAT+TGG | - | chr8.1:72206812-72206831 | None:intergenic | 25.0% |
!! | CTATGTCGATATGTATTTTA+CGG | - | chr8.1:72206410-72206429 | None:intergenic | 25.0% |
!! | TAAATACGTATTTTGTCCTA+TGG | + | chr8.1:72204207-72204226 | MS.gene066433:intron | 25.0% |
!!! | GTGGATTTTTAGAAAACATT+GGG | - | chr8.1:72207288-72207307 | None:intergenic | 25.0% |
!!! | TGATTTTAGTTTCCAATAGA+TGG | + | chr8.1:72207552-72207571 | MS.gene066433:intron | 25.0% |
!!! | TGTGGATTTTTAGAAAACAT+TGG | - | chr8.1:72207289-72207308 | None:intergenic | 25.0% |
!!! | TTCGTTGAATTTTAATATGC+AGG | + | chr8.1:72206869-72206888 | MS.gene066433:intron | 25.0% |
!!! | TTGAGTTCATTTTTAAACCA+TGG | + | chr8.1:72203843-72203862 | MS.gene066433:intron | 25.0% |
!!! | TTTTTAGAAAACATTGGGAA+AGG | - | chr8.1:72207283-72207302 | None:intergenic | 25.0% |
AAAATGTAGTTTCACAACCA+AGG | + | chr8.1:72204015-72204034 | MS.gene066433:CDS | 30.0% | |
AAATGGCATGAAAAGAAACT+AGG | - | chr8.1:72204692-72204711 | None:intergenic | 30.0% | |
AAGGCCAAACTAATGTATTT+GGG | - | chr8.1:72205950-72205969 | None:intergenic | 30.0% | |
AATAGAGACAAACAATAACC+GGG | + | chr8.1:72204784-72204803 | MS.gene066433:intron | 30.0% | |
AATGAAACTGATGTTGACAT+TGG | + | chr8.1:72204296-72204315 | MS.gene066433:CDS | 30.0% | |
ACATAAAAAACACTTTCTCC+CGG | - | chr8.1:72204805-72204824 | None:intergenic | 30.0% | |
ACTAAATGTATGCTATGTCA+TGG | - | chr8.1:72207685-72207704 | None:intergenic | 30.0% | |
ATACTTCCGAACTAACTATA+GGG | + | chr8.1:72207403-72207422 | MS.gene066433:intron | 30.0% | |
ATAGGATCTCCATGTAAAAT+AGG | + | chr8.1:72206426-72206445 | MS.gene066433:intron | 30.0% | |
ATCTACAACAACAAACTTCA+AGG | - | chr8.1:72205215-72205234 | None:intergenic | 30.0% | |
ATTTCTATCTTCACTTATGG+AGG | + | chr8.1:72206665-72206684 | MS.gene066433:intron | 30.0% | |
ATTTCTTATGACTGTCATTC+AGG | + | chr8.1:72205525-72205544 | MS.gene066433:intron | 30.0% | |
CAAGTTATTGTAGTTTCAGA+TGG | + | chr8.1:72205273-72205292 | MS.gene066433:intron | 30.0% | |
CAATCAATTAACCAACATTG+AGG | + | chr8.1:72207865-72207884 | MS.gene066433:CDS | 30.0% | |
CACATACAAAATAACTCCAT+AGG | + | chr8.1:72204368-72204387 | MS.gene066433:CDS | 30.0% | |
CCACTAGTATAGAACAATTT+AGG | - | chr8.1:72205919-72205938 | None:intergenic | 30.0% | |
CCTAAATTGTTCTATACTAG+TGG | + | chr8.1:72205916-72205935 | MS.gene066433:intron | 30.0% | |
CGTAAAATACATATCGACAT+AGG | + | chr8.1:72206408-72206427 | MS.gene066433:intron | 30.0% | |
GTACCGAAAAAACAGTAAAT+TGG | + | chr8.1:72207598-72207617 | MS.gene066433:intron | 30.0% | |
GTCATGTAAATCATAATTGC+AGG | + | chr8.1:72207745-72207764 | MS.gene066433:intron | 30.0% | |
TAAAAATCCACATAGACGTT+TGG | + | chr8.1:72207297-72207316 | MS.gene066433:intron | 30.0% | |
TAAGGCCAAACTAATGTATT+TGG | - | chr8.1:72205951-72205970 | None:intergenic | 30.0% | |
TATACTTCCGAACTAACTAT+AGG | + | chr8.1:72207402-72207421 | MS.gene066433:intron | 30.0% | |
TATACTTCTTTCTTGGTATC+AGG | + | chr8.1:72205767-72205786 | MS.gene066433:intron | 30.0% | |
TATATAGTCCCATTTACACT+TGG | + | chr8.1:72206953-72206972 | MS.gene066433:CDS | 30.0% | |
TCTACATTATTGCCATCTAT+TGG | - | chr8.1:72207567-72207586 | None:intergenic | 30.0% | |
TGGAGACGGAAAAATAAAAT+TGG | - | chr8.1:72206792-72206811 | None:intergenic | 30.0% | |
TGGTAATATGCTTCACAATT+CGG | - | chr8.1:72203889-72203908 | None:intergenic | 30.0% | |
TGGTTAACTTCTTCAATATG+AGG | - | chr8.1:72207847-72207866 | None:intergenic | 30.0% | |
TGTACAAATTAATGTCGTTC+TGG | + | chr8.1:72205012-72205031 | MS.gene066433:CDS | 30.0% | |
TGTACATGCAATAGAACAAA+GGG | - | chr8.1:72204498-72204517 | None:intergenic | 30.0% | |
TTACATGTTTGTGATACTCT+TGG | + | chr8.1:72205641-72205660 | MS.gene066433:intron | 30.0% | |
TTATTGCATGACATGAAAAC+TGG | + | chr8.1:72207704-72207723 | MS.gene066433:intron | 30.0% | |
TTGTACATGCAATAGAACAA+AGG | - | chr8.1:72204499-72204518 | None:intergenic | 30.0% | |
TTTCTTATGACTGTCATTCA+GGG | + | chr8.1:72205526-72205545 | MS.gene066433:intron | 30.0% | |
! | ATAATGATGGAAATTGGAGA+CGG | - | chr8.1:72206806-72206825 | None:intergenic | 30.0% |
! | ATATGTATTTTACGGACGTT+TGG | - | chr8.1:72206402-72206421 | None:intergenic | 30.0% |
! | CCAATAAGAAGCACATAAAA+TGG | - | chr8.1:72204614-72204633 | None:intergenic | 30.0% |
! | CCATTTTATGTGCTTCTTAT+TGG | + | chr8.1:72204611-72204630 | MS.gene066433:CDS | 30.0% |
! | CTACTTGTACCTATTTTACA+TGG | - | chr8.1:72206438-72206457 | None:intergenic | 30.0% |
! | TTGTGAAACTACATTTTCCT+CGG | - | chr8.1:72204012-72204031 | None:intergenic | 30.0% |
!! | ACAATAACTTGCTGTCAATT+CGG | - | chr8.1:72205264-72205283 | None:intergenic | 30.0% |
!! | ACTACTTTTACAGGTATGAT+TGG | + | chr8.1:72206518-72206537 | MS.gene066433:intron | 30.0% |
!! | AGTTGTTTCTACAATTGAAC+AGG | + | chr8.1:72206219-72206238 | MS.gene066433:intron | 30.0% |
!! | ATATGTCGCTTTAAACTTGA+TGG | + | chr8.1:72206904-72206923 | MS.gene066433:CDS | 30.0% |
!! | CTATTGACAACTACTTTTAC+AGG | + | chr8.1:72206509-72206528 | MS.gene066433:intron | 30.0% |
!! | GTTTGTTGTTGTAGATTATG+AGG | + | chr8.1:72205219-72205238 | MS.gene066433:intron | 30.0% |
!!! | GGACCAATTTACTGTTTTTT+CGG | - | chr8.1:72207604-72207623 | None:intergenic | 30.0% |
!!! | TTGTTGATTTTCTTTGGCAT+AGG | + | chr8.1:72204433-72204452 | MS.gene066433:intron | 30.0% |
AACGCAGCATATAATTAGCA+CGG | - | chr8.1:72207226-72207245 | None:intergenic | 35.0% | |
AAGACGATAAAGAGTTGTGT+TGG | + | chr8.1:72207140-72207159 | MS.gene066433:intron | 35.0% | |
AAGCAAATATCTTATCCTCG+TGG | - | chr8.1:72204758-72204777 | None:intergenic | 35.0% | |
AAGTTTAATCCAGCATCTTG+TGG | - | chr8.1:72204341-72204360 | None:intergenic | 35.0% | |
ACAAGATGCTGGATTAAACT+TGG | + | chr8.1:72204340-72204359 | MS.gene066433:CDS | 35.0% | |
ACGATAGTTTATGATGAGGA+TGG | - | chr8.1:72204071-72204090 | None:intergenic | 35.0% | |
ACTGCAAATACTATGCAGAA+GGG | - | chr8.1:72205374-72205393 | None:intergenic | 35.0% | |
AGGTATGATACACATGCTTT+GGG | + | chr8.1:72206600-72206619 | MS.gene066433:intron | 35.0% | |
AGTTGCATCTGTAAATTCCA+TGG | - | chr8.1:72203863-72203882 | None:intergenic | 35.0% | |
ATAGGTATGCTCAACTTTCT+CGG | + | chr8.1:72204386-72204405 | MS.gene066433:intron | 35.0% | |
ATCTTGACATATGTTTGTGC+AGG | - | chr8.1:72205308-72205327 | None:intergenic | 35.0% | |
ATGATTCCAAAGTCAACCTT+AGG | + | chr8.1:72205603-72205622 | MS.gene066433:intron | 35.0% | |
ATTATTTGGTTGCGCTCTAT+TGG | + | chr8.1:72207045-72207064 | MS.gene066433:intron | 35.0% | |
CAATTATGATCCCCAAGAAT+AGG | - | chr8.1:72204115-72204134 | None:intergenic | 35.0% | |
CATAGTATTTGCAGTGGTTT+GGG | + | chr8.1:72205379-72205398 | MS.gene066433:CDS | 35.0% | |
CCAAACTAATGTATTTGGGT+TGG | - | chr8.1:72205946-72205965 | None:intergenic | 35.0% | |
CCAACCCAAATACATTAGTT+TGG | + | chr8.1:72205943-72205962 | MS.gene066433:intron | 35.0% | |
CTCATCATAAACTATCGTAC+AGG | + | chr8.1:72204073-72204092 | MS.gene066433:CDS | 35.0% | |
CTGTACGATAGTTTATGATG+AGG | - | chr8.1:72204075-72204094 | None:intergenic | 35.0% | |
GAAGAATAGAATGCCACTAT+AGG | - | chr8.1:72207020-72207039 | None:intergenic | 35.0% | |
GAATGAATGAAATAACCACG+AGG | + | chr8.1:72204740-72204759 | MS.gene066433:intron | 35.0% | |
GTACAACTGTATGGATACTT+AGG | - | chr8.1:72204530-72204549 | None:intergenic | 35.0% | |
GTCATGCAGTGTGTTTATTT+CGG | - | chr8.1:72207446-72207465 | None:intergenic | 35.0% | |
TACTTCCGAACTAACTATAG+GGG | + | chr8.1:72207404-72207423 | MS.gene066433:intron | 35.0% | |
TAGATGGCAATAATGTAGAC+TGG | + | chr8.1:72207568-72207587 | MS.gene066433:intron | 35.0% | |
TAGGTATGATACACATGCTT+TGG | + | chr8.1:72206599-72206618 | MS.gene066433:intron | 35.0% | |
TATACTTCCAAACGTCTATG+TGG | - | chr8.1:72207307-72207326 | None:intergenic | 35.0% | |
TATGCGTTTGTCCTATTCTT+GGG | + | chr8.1:72204101-72204120 | MS.gene066433:intron | 35.0% | |
TATGGGTGTTCGTTTCTAAA+TGG | + | chr8.1:72205832-72205851 | MS.gene066433:CDS | 35.0% | |
TATGTCAAGATACCGTTCTT+TGG | + | chr8.1:72205317-72205336 | MS.gene066433:CDS | 35.0% | |
TCATGCAGTGTGTTTATTTC+GGG | - | chr8.1:72207445-72207464 | None:intergenic | 35.0% | |
TCGGTTTAGCTGTTCATTAA+TGG | - | chr8.1:72205682-72205701 | None:intergenic | 35.0% | |
TGATTCCAAAGTCAACCTTA+GGG | + | chr8.1:72205604-72205623 | MS.gene066433:intron | 35.0% | |
TGGAATCATACCTTGAGATT+TGG | - | chr8.1:72205592-72205611 | None:intergenic | 35.0% | |
TTAAAGCGACATATGTGATG+AGG | - | chr8.1:72206898-72206917 | None:intergenic | 35.0% | |
TTAGAAAACATTGGGAAAGG+AGG | - | chr8.1:72207280-72207299 | None:intergenic | 35.0% | |
TTATGCGTTTGTCCTATTCT+TGG | + | chr8.1:72204100-72204119 | MS.gene066433:intron | 35.0% | |
TTCATCAGCTATATTTGCCT+TGG | - | chr8.1:72204035-72204054 | None:intergenic | 35.0% | |
TTCTTTCTTGGTATCAGGTT+GGG | + | chr8.1:72205772-72205791 | MS.gene066433:intron | 35.0% | |
TTGCTTAAAATAACCGCCAT+AGG | - | chr8.1:72204226-72204245 | None:intergenic | 35.0% | |
TTGTAGCAAGCCTAAGAATA+AGG | + | chr8.1:72203816-72203835 | MS.gene066433:CDS | 35.0% | |
! | AATATATGTATCTGGCCTTC+TGG | + | chr8.1:72206164-72206183 | MS.gene066433:intron | 35.0% |
! | ATACGTATTTTGTCCTATGG+CGG | + | chr8.1:72204210-72204229 | MS.gene066433:intron | 35.0% |
! | ATGGCTTTGCTTGATACTAT+TGG | + | chr8.1:72205717-72205736 | MS.gene066433:intron | 35.0% |
! | CCATCACATCAACATTTTGT+CGG | - | chr8.1:72205701-72205720 | None:intergenic | 35.0% |
! | CTCAAGATTTTATGGACAAG+AGG | + | chr8.1:72207802-72207821 | MS.gene066433:CDS | 35.0% |
! | CTTTTACAGGTATGATTGGT+TGG | + | chr8.1:72206522-72206541 | MS.gene066433:intron | 35.0% |
! | GAAAGTGTAAACACCTATAG+TGG | + | chr8.1:72207004-72207023 | MS.gene066433:intron | 35.0% |
! | GAATATGTTGCAGAAAGTGT+TGG | + | chr8.1:72204912-72204931 | MS.gene066433:CDS | 35.0% |
! | TAAGGGTCTACAAACTTGTT+TGG | + | chr8.1:72205160-72205179 | MS.gene066433:intron | 35.0% |
! | TGAGCAAGAGAAGCTTTTAA+AGG | + | chr8.1:72204663-72204682 | MS.gene066433:CDS | 35.0% |
! | TGGAAGTATACTTCTTGACA+GGG | + | chr8.1:72207317-72207336 | MS.gene066433:intron | 35.0% |
! | TGGATAACTTTTATGGTTGC+AGG | + | chr8.1:72204878-72204897 | MS.gene066433:intron | 35.0% |
! | TTAAACTTGATGGATGGACA+TGG | + | chr8.1:72206914-72206933 | MS.gene066433:CDS | 35.0% |
! | TTGGAAGTATACTTCTTGAC+AGG | + | chr8.1:72207316-72207335 | MS.gene066433:intron | 35.0% |
! | TTGTAGTAGCATTTTCACTG+AGG | + | chr8.1:72206120-72206139 | MS.gene066433:CDS | 35.0% |
! | TTTTTGCATTGGAGGAATAG+AGG | + | chr8.1:72205058-72205077 | MS.gene066433:CDS | 35.0% |
!! | ACTTTTCAAGATGGTTTGTG+AGG | + | chr8.1:72204271-72204290 | MS.gene066433:CDS | 35.0% |
!! | CTGTACAGAACTTTTCAAGA+TGG | + | chr8.1:72204262-72204281 | MS.gene066433:intron | 35.0% |
!! | GGAAAAACTGTGTTTTTGTC+CGG | + | chr8.1:72207338-72207357 | MS.gene066433:intron | 35.0% |
!!! | TACTGTTTTTTCGGTACACA+AGG | - | chr8.1:72207595-72207614 | None:intergenic | 35.0% |
ACCACGTTTGTTTGATCCTT+GGG | + | chr8.1:72206052-72206071 | MS.gene066433:CDS | 40.0% | |
ACTTCCGAACTAACTATAGG+GGG | + | chr8.1:72207405-72207424 | MS.gene066433:intron | 40.0% | |
AGCAAGTGTCAGATATGGAA+CGG | - | chr8.1:72205345-72205364 | None:intergenic | 40.0% | |
ATATGAGGACAATGCCTTTC+TGG | - | chr8.1:72207832-72207851 | None:intergenic | 40.0% | |
ATGCGTTTGTCCTATTCTTG+GGG | + | chr8.1:72204102-72204121 | MS.gene066433:intron | 40.0% | |
ATGCTATGTCATGGTCACAT+GGG | - | chr8.1:72207676-72207695 | None:intergenic | 40.0% | |
CACTGCAAATACTATGCAGA+AGG | - | chr8.1:72205375-72205394 | None:intergenic | 40.0% | |
CCGACAAAATGTTGATGTGA+TGG | + | chr8.1:72205698-72205717 | MS.gene066433:intron | 40.0% | |
CTTCTGCATAGTATTTGCAG+TGG | + | chr8.1:72205373-72205392 | MS.gene066433:CDS | 40.0% | |
CTTCTTTCCCAACGACAAAA+AGG | - | chr8.1:72207773-72207792 | None:intergenic | 40.0% | |
CTTCTTTCTTGGTATCAGGT+TGG | + | chr8.1:72205771-72205790 | MS.gene066433:intron | 40.0% | |
GAAAATGCTACTACAAGTCC+CGG | - | chr8.1:72206116-72206135 | None:intergenic | 40.0% | |
GAGAAAGTTGAGCATACCTA+TGG | - | chr8.1:72204387-72204406 | None:intergenic | 40.0% | |
GAGAGCTTATGTCGTGTTTA+CGG | - | chr8.1:72206251-72206270 | None:intergenic | 40.0% | |
GCAAATATAGCTGATGAAGC+CGG | + | chr8.1:72204037-72204056 | MS.gene066433:CDS | 40.0% | |
GCATAGTATTTGCAGTGGTT+TGG | + | chr8.1:72205378-72205397 | MS.gene066433:CDS | 40.0% | |
GGTATGATACACATGCTTTG+GGG | + | chr8.1:72206601-72206620 | MS.gene066433:intron | 40.0% | |
GGTTGAACTTAACCATGCAA+AGG | - | chr8.1:72207083-72207102 | None:intergenic | 40.0% | |
GTAACAGCAAGTGTCAGATA+TGG | - | chr8.1:72205350-72205369 | None:intergenic | 40.0% | |
GTGCACCAAAATGATCTCAT+TGG | - | chr8.1:72203990-72204009 | None:intergenic | 40.0% | |
TACCACGTTTGTTTGATCCT+TGG | + | chr8.1:72206051-72206070 | MS.gene066433:CDS | 40.0% | |
TATGCTATGTCATGGTCACA+TGG | - | chr8.1:72207677-72207696 | None:intergenic | 40.0% | |
TGTTCGCATACCAAATCTCA+AGG | + | chr8.1:72205579-72205598 | MS.gene066433:CDS | 40.0% | |
TTTCGGGGACATTATCTTAC+CGG | + | chr8.1:72206094-72206113 | MS.gene066433:CDS | 40.0% | |
! | AAGTGGAGAGTACAACTGTA+TGG | - | chr8.1:72204539-72204558 | None:intergenic | 40.0% |
! | AGTAGCATTTTCACTGAGGT+TGG | + | chr8.1:72206124-72206143 | MS.gene066433:intron | 40.0% |
! | GAGGCGATCTCAAGATTTTA+TGG | + | chr8.1:72207794-72207813 | MS.gene066433:CDS | 40.0% |
! | GCTCACCAATGAGATCATTT+TGG | + | chr8.1:72203982-72204001 | MS.gene066433:intron | 40.0% |
! | GTCGCTTTAAACTTGATGGA+TGG | + | chr8.1:72206908-72206927 | MS.gene066433:CDS | 40.0% |
! | TTTGTCCGGAAGTATACTTC+TGG | + | chr8.1:72207352-72207371 | MS.gene066433:intron | 40.0% |
! | TTTTTGTGGCTTATGGCTGT+CGG | + | chr8.1:72204586-72204605 | MS.gene066433:CDS | 40.0% |
!! | GGTTACAGCATCATTGGTTT+CGG | + | chr8.1:72206077-72206096 | MS.gene066433:CDS | 40.0% |
!! | GTTACAGCATCATTGGTTTC+GGG | + | chr8.1:72206078-72206097 | MS.gene066433:CDS | 40.0% |
!! | GTTCTGGTTTCTTGAAGTTC+TGG | + | chr8.1:72205028-72205047 | MS.gene066433:CDS | 40.0% |
!! | TTACAGCATCATTGGTTTCG+GGG | + | chr8.1:72206079-72206098 | MS.gene066433:CDS | 40.0% |
!! | TTAGGCTTGCTACAACAATC+AGG | - | chr8.1:72203811-72203830 | None:intergenic | 40.0% |
!!! | ATGTTGCGGAAGTGTTTTTG+TGG | + | chr8.1:72204572-72204591 | MS.gene066433:CDS | 40.0% |
!!! | CTGGTGGTTCTTTTTTGCAT+TGG | + | chr8.1:72205047-72205066 | MS.gene066433:CDS | 40.0% |
!!! | GGAAGTGTTTTTGTGGCTTA+TGG | + | chr8.1:72204579-72204598 | MS.gene066433:CDS | 40.0% |
!!! | GTGGTTCTTTTTTGCATTGG+AGG | + | chr8.1:72205050-72205069 | MS.gene066433:CDS | 40.0% |
AATGCAGAGATACTGCCCTA+AGG | - | chr8.1:72205622-72205641 | None:intergenic | 45.0% | |
ACATCAACCAATGGACGAAG+TGG | - | chr8.1:72204556-72204575 | None:intergenic | 45.0% | |
ACGTGGTAACTTGAGAAGCA+TGG | - | chr8.1:72206039-72206058 | None:intergenic | 45.0% | |
ACTTCCGCAACATCAACCAA+TGG | - | chr8.1:72204565-72204584 | None:intergenic | 45.0% | |
CCACGTTTGTTTGATCCTTG+GGG | + | chr8.1:72206053-72206072 | MS.gene066433:CDS | 45.0% | |
CTATATAGAGCAAAGCTGGC+TGG | - | chr8.1:72206940-72206959 | None:intergenic | 45.0% | |
GCAATGACTGCTTATGGTCT+AGG | + | chr8.1:72206580-72206599 | MS.gene066433:CDS | 45.0% | |
GGGACTATATAGAGCAAAGC+TGG | - | chr8.1:72206944-72206963 | None:intergenic | 45.0% | |
GGGTGTTCGTTTCTAAATGG+TGG | + | chr8.1:72205835-72205854 | MS.gene066433:CDS | 45.0% | |
GGTGATAAGAGTGGAGAAGA+CGG | + | chr8.1:72206008-72206027 | MS.gene066433:CDS | 45.0% | |
GTTATGCTTCCACAAGATGC+TGG | + | chr8.1:72204329-72204348 | MS.gene066433:CDS | 45.0% | |
GTTTGGCGGCTCTATTATCA+TGG | + | chr8.1:72205177-72205196 | MS.gene066433:CDS | 45.0% | |
TATGGAACGGCTCCAAAGAA+CGG | - | chr8.1:72205332-72205351 | None:intergenic | 45.0% | |
TTCGGGGACATTATCTTACC+GGG | + | chr8.1:72206095-72206114 | MS.gene066433:CDS | 45.0% | |
TTGCTCAATAGCAGCTTCTC+TGG | - | chr8.1:72204650-72204669 | None:intergenic | 45.0% | |
! | AGTATTTGCAGTGGTTTGGG+CGG | + | chr8.1:72205382-72205401 | MS.gene066433:CDS | 45.0% |
! | CGTGCTTGCTTCTTGTTTCT+TGG | + | chr8.1:72204983-72205002 | MS.gene066433:CDS | 45.0% |
! | CGTGGTAACTTGAGAAGCAT+GGG | - | chr8.1:72206038-72206057 | None:intergenic | 45.0% |
! | CTCTAGCTCATTCAACTCTC+AGG | - | chr8.1:72207468-72207487 | None:intergenic | 45.0% |
! | CTGGTTTCTTGAAGTTCTGG+TGG | + | chr8.1:72205031-72205050 | MS.gene066433:CDS | 45.0% |
! | GGGTCTACAAACTTGTTTGG+CGG | + | chr8.1:72205163-72205182 | MS.gene066433:intron | 45.0% |
! | GTGCTTCTTATTGGTCTGCT+TGG | + | chr8.1:72204620-72204639 | MS.gene066433:CDS | 45.0% |
! | GTGTGACATTTTCTCTGCAC+AGG | + | chr8.1:72205977-72205996 | MS.gene066433:intron | 45.0% |
! | TACTGCCCTAAGGTTGACTT+TGG | - | chr8.1:72205612-72205631 | None:intergenic | 45.0% |
! | TCATGAGAGCGTGATGATAG+TGG | + | chr8.1:72205860-72205879 | MS.gene066433:CDS | 45.0% |
! | TCCGGAAGTATACTTCTGGA+GGG | + | chr8.1:72207356-72207375 | MS.gene066433:intron | 45.0% |
! | TCGTCCATTGGTTGATGTTG+CGG | + | chr8.1:72204558-72204577 | MS.gene066433:CDS | 45.0% |
! | TCTTGTGGAAGCATAACAGC+AGG | - | chr8.1:72204326-72204345 | None:intergenic | 45.0% |
! | TGCGCTCTATTGGTTGTTCA+AGG | + | chr8.1:72207055-72207074 | MS.gene066433:intron | 45.0% |
! | TTGTTCAAGGTGCCTTTGCA+TGG | + | chr8.1:72207068-72207087 | MS.gene066433:intron | 45.0% |
! | TTTTCTCTGCACAGGTAGCT+CGG | + | chr8.1:72205985-72206004 | MS.gene066433:intron | 45.0% |
AACGACAAGCATCATACGCG+TGG | + | chr8.1:72205408-72205427 | MS.gene066433:CDS | 50.0% | |
ACACGAAATATCCAGCTCGG+AGG | - | chr8.1:72206558-72206577 | None:intergenic | 50.0% | |
ATGATGCTGTAACCACCCCA+AGG | - | chr8.1:72206071-72206090 | None:intergenic | 50.0% | |
CAAGCATCATACGCGTGGAT+TGG | + | chr8.1:72205413-72205432 | MS.gene066433:CDS | 50.0% | |
CCCACACGAAATATCCAGCT+CGG | - | chr8.1:72206561-72206580 | None:intergenic | 50.0% | |
CCCACCCCCTATAGTTAGTT+CGG | - | chr8.1:72207412-72207431 | None:intergenic | 50.0% | |
CCCCAAGGATCAAACAAACG+TGG | - | chr8.1:72206056-72206075 | None:intergenic | 50.0% | |
CCGAACTAACTATAGGGGGT+GGG | + | chr8.1:72207409-72207428 | MS.gene066433:intron | 50.0% | |
CCGAGCTGGATATTTCGTGT+GGG | + | chr8.1:72206558-72206577 | MS.gene066433:CDS | 50.0% | |
CGTTTGTTTGATCCTTGGGG+TGG | + | chr8.1:72206056-72206075 | MS.gene066433:CDS | 50.0% | |
GGACAAGAGGAGAACCAGAA+AGG | + | chr8.1:72207815-72207834 | MS.gene066433:CDS | 50.0% | |
GTACTCTCCACTTCGTCCAT+TGG | + | chr8.1:72204546-72204565 | MS.gene066433:CDS | 50.0% | |
GTGTGGGCAATGACTGCTTA+TGG | + | chr8.1:72206574-72206593 | MS.gene066433:CDS | 50.0% | |
TCCAAGAGATGTCAGCTGCA+TGG | - | chr8.1:72207625-72207644 | None:intergenic | 50.0% | |
TCCATGCAGCTGACATCTCT+TGG | + | chr8.1:72207621-72207640 | MS.gene066433:intron | 50.0% | |
TCCGAACTAACTATAGGGGG+TGG | + | chr8.1:72207408-72207427 | MS.gene066433:intron | 50.0% | |
TCCGAGCTGGATATTTCGTG+TGG | + | chr8.1:72206557-72206576 | MS.gene066433:CDS | 50.0% | |
TGGGGTGGTTACAGCATCAT+TGG | + | chr8.1:72206071-72206090 | MS.gene066433:CDS | 50.0% | |
TTTCTCTGCACAGGTAGCTC+GGG | + | chr8.1:72205986-72206005 | MS.gene066433:intron | 50.0% | |
! | GCAGGCACCTTTTTGTCGTT+GGG | + | chr8.1:72207763-72207782 | MS.gene066433:intron | 50.0% |
! | GCCCTCCAGAAGTATACTTC+CGG | - | chr8.1:72207360-72207379 | None:intergenic | 50.0% |
! | GTCCGGAAGTATACTTCTGG+AGG | + | chr8.1:72207355-72207374 | MS.gene066433:intron | 50.0% |
! | TGCAGGCACCTTTTTGTCGT+TGG | + | chr8.1:72207762-72207781 | MS.gene066433:intron | 50.0% |
!! | GAGATCATTTTGGTGCACCG+AGG | + | chr8.1:72203992-72204011 | MS.gene066433:CDS | 50.0% |
!! | GCAGAAAGTGTTGGTTCTCG+TGG | + | chr8.1:72204921-72204940 | MS.gene066433:CDS | 50.0% |
!! | GGCTTGCTACAACAATCAGG+AGG | - | chr8.1:72203808-72203827 | None:intergenic | 50.0% |
!! | TGTTGGTTCTCGTGGTTACG+TGG | + | chr8.1:72204929-72204948 | MS.gene066433:CDS | 50.0% |
GATGAGGATGGCTGAAGCAC+CGG | - | chr8.1:72204059-72204078 | None:intergenic | 55.0% | |
GCAAAGAAGAACCTCCGAGC+TGG | + | chr8.1:72206544-72206563 | MS.gene066433:CDS | 55.0% | |
GTAGCTCGGGGTGATAAGAG+TGG | + | chr8.1:72205999-72206018 | MS.gene066433:CDS | 55.0% | |
TGGGAAAGGAGGAGAAGCTC+CGG | - | chr8.1:72207269-72207288 | None:intergenic | 55.0% | |
TTCTCTGCACAGGTAGCTCG+GGG | + | chr8.1:72205987-72206006 | MS.gene066433:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 72203796 | 72207885 | 72203796 | ID=MS.gene066433 |
chr8.1 | mRNA | 72203796 | 72207885 | 72203796 | ID=MS.gene066433.t1;Parent=MS.gene066433 |
chr8.1 | exon | 72203796 | 72203837 | 72203796 | ID=MS.gene066433.t1.exon1;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72203796 | 72203837 | 72203796 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72203983 | 72204094 | 72203983 | ID=MS.gene066433.t1.exon2;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72203983 | 72204094 | 72203983 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72204270 | 72204389 | 72204270 | ID=MS.gene066433.t1.exon3;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72204270 | 72204389 | 72204270 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72204533 | 72204684 | 72204533 | ID=MS.gene066433.t1.exon4;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72204533 | 72204684 | 72204533 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72204900 | 72205079 | 72204900 | ID=MS.gene066433.t1.exon5;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72204900 | 72205079 | 72204900 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72205164 | 72205198 | 72205164 | ID=MS.gene066433.t1.exon6;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72205164 | 72205198 | 72205164 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72205286 | 72205448 | 72205286 | ID=MS.gene066433.t1.exon7;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72205286 | 72205448 | 72205286 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72205547 | 72205600 | 72205547 | ID=MS.gene066433.t1.exon8;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72205547 | 72205600 | 72205547 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72205789 | 72205881 | 72205789 | ID=MS.gene066433.t1.exon9;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72205789 | 72205881 | 72205789 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72205999 | 72206141 | 72205999 | ID=MS.gene066433.t1.exon10;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72205999 | 72206141 | 72205999 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72206531 | 72206601 | 72206531 | ID=MS.gene066433.t1.exon11;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72206531 | 72206601 | 72206531 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72206891 | 72206974 | 72206891 | ID=MS.gene066433.t1.exon12;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72206891 | 72206974 | 72206891 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
chr8.1 | exon | 72207767 | 72207885 | 72207767 | ID=MS.gene066433.t1.exon13;Parent=MS.gene066433.t1 |
chr8.1 | CDS | 72207767 | 72207885 | 72207767 | ID=cds.MS.gene066433.t1;Parent=MS.gene066433.t1 |
Gene Sequence |
Protein sequence |