Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061333.t1 | XP_013443758.1 | 85.6 | 515 | 41 | 3 | 5 | 489 | 1 | 512 | 1.80E-245 | 858.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061333.t1 | Q9SD53 | 34.3 | 181 | 95 | 4 | 29 | 208 | 35 | 192 | 2.1e-16 | 88.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061333.t1 | A0A072TLQ6 | 85.6 | 515 | 41 | 3 | 5 | 489 | 1 | 512 | 1.3e-245 | 858.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene061333 | 0.816399 | 5.64E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene061333 | 0.815248 | 1.02E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene061333 | 0.817013 | 4.11E-52 | -1.69E-46 |
| MS.gene049195 | MS.gene061333 | 0.800331 | 1.52E-48 | -1.69E-46 |
| MS.gene049260 | MS.gene061333 | 0.818826 | 1.60E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene061333 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene061333 | 0.808715 | 2.70E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene061333 | 0.81226 | 4.64E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene061333 | 0.827277 | 1.71E-54 | -1.69E-46 |
| MS.gene050020 | MS.gene061333 | 0.821978 | 3.03E-53 | -1.69E-46 |
| MS.gene050137 | MS.gene061333 | 0.821938 | 3.09E-53 | -1.69E-46 |
| MS.gene050156 | MS.gene061333 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene050168 | MS.gene061333 | 0.80326 | 3.80E-49 | -1.69E-46 |
| MS.gene05016 | MS.gene061333 | 0.807516 | 4.87E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene061333 | 0.84032 | 9.34E-58 | -1.69E-46 |
| MS.gene050227 | MS.gene061333 | 0.836669 | 8.17E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene061333 | 0.83753 | 4.92E-57 | -1.69E-46 |
| MS.gene050330 | MS.gene061333 | -0.800813 | 1.21E-48 | -1.69E-46 |
| MS.gene050438 | MS.gene061333 | 0.802296 | 6.00E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene061333 | 0.846787 | 1.74E-59 | -1.69E-46 |
| MS.gene050478 | MS.gene061333 | 0.811886 | 5.59E-51 | -1.69E-46 |
| MS.gene050546 | MS.gene061333 | 0.806299 | 8.80E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene061333 | 0.806929 | 6.48E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene061333 | 0.864548 | 1.12E-64 | -1.69E-46 |
| MS.gene050750 | MS.gene061333 | 0.805005 | 1.64E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene061333 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene061333 | 0.856866 | 2.41E-62 | -1.69E-46 |
| MS.gene050807 | MS.gene061333 | 0.839304 | 1.72E-57 | -1.69E-46 |
| MS.gene050808 | MS.gene061333 | 0.80652 | 7.90E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene061333 | 0.817872 | 2.63E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene061333 | 0.82528 | 5.11E-54 | -1.69E-46 |
| MS.gene050959 | MS.gene061333 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene061333 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene051265 | MS.gene061333 | 0.856175 | 3.84E-62 | -1.69E-46 |
| MS.gene051344 | MS.gene061333 | 0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene061333 | 0.830894 | 2.27E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene061333 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene061333 | 0.829036 | 6.45E-55 | -1.69E-46 |
| MS.gene052056 | MS.gene061333 | -0.810872 | 9.29E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene061333 | 0.801408 | 9.13E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene061333 | 0.855074 | 8.05E-62 | -1.69E-46 |
| MS.gene052323 | MS.gene061333 | 0.819453 | 1.15E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene061333 | 0.84429 | 8.28E-59 | -1.69E-46 |
| MS.gene052611 | MS.gene061333 | 0.823851 | 1.11E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene061333 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene061333 | 0.801329 | 9.48E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene061333 | 0.812613 | 3.88E-51 | -1.69E-46 |
| MS.gene053054 | MS.gene061333 | -0.832222 | 1.07E-55 | -1.69E-46 |
| MS.gene053074 | MS.gene061333 | 0.804663 | 1.94E-49 | -1.69E-46 |
| MS.gene053147 | MS.gene061333 | 0.82264 | 2.13E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene061333 | 0.848061 | 7.79E-60 | -1.69E-46 |
| MS.gene053184 | MS.gene061333 | 0.838432 | 2.89E-57 | -1.69E-46 |
| MS.gene053201 | MS.gene061333 | 0.812867 | 3.42E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene061333 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene061333 | 0.801501 | 8.74E-49 | -1.69E-46 |
| MS.gene053331 | MS.gene061333 | 0.81818 | 2.24E-52 | -1.69E-46 |
| MS.gene053565 | MS.gene061333 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene053630 | MS.gene061333 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene053641 | MS.gene061333 | 0.805465 | 1.32E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene061333 | 0.803442 | 3.48E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene061333 | 0.814684 | 1.36E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene061333 | 0.806342 | 8.62E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene061333 | -0.838575 | 2.65E-57 | -1.69E-46 |
| MS.gene054379 | MS.gene061333 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene054433 | MS.gene061333 | 0.834677 | 2.61E-56 | -1.69E-46 |
| MS.gene054467 | MS.gene061333 | 0.866861 | 2.09E-65 | -1.69E-46 |
| MS.gene054468 | MS.gene061333 | 0.866992 | 1.90E-65 | -1.69E-46 |
| MS.gene054472 | MS.gene061333 | 0.802281 | 6.04E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene061333 | 0.830505 | 2.83E-55 | -1.69E-46 |
| MS.gene054559 | MS.gene061333 | 0.842119 | 3.14E-58 | -1.69E-46 |
| MS.gene054581 | MS.gene061333 | 0.817729 | 2.83E-52 | -1.69E-46 |
| MS.gene054610 | MS.gene061333 | 0.806769 | 7.00E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene061333 | 0.826063 | 3.33E-54 | -1.69E-46 |
| MS.gene054697 | MS.gene061333 | 0.803558 | 3.29E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene061333 | 0.819919 | 9.02E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene061333 | 0.805112 | 1.56E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene061333 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene061333 | 0.804575 | 2.02E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene061333 | 0.818711 | 1.70E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene061333 | 0.931641 | 2.79E-94 | -1.69E-46 |
| MS.gene055357 | MS.gene061333 | 0.879795 | 9.31E-70 | -1.69E-46 |
| MS.gene055358 | MS.gene061333 | 0.95587 | 1.12E-113 | -1.69E-46 |
| MS.gene055363 | MS.gene061333 | 0.803237 | 3.84E-49 | -1.69E-46 |
| MS.gene055507 | MS.gene061333 | 0.815798 | 7.68E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene061333 | 0.8301 | 3.55E-55 | -1.69E-46 |
| MS.gene055804 | MS.gene061333 | 0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene061333 | 0.827335 | 1.66E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene061333 | 0.811697 | 6.15E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene061333 | 0.838913 | 2.17E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene061333 | 0.844359 | 7.94E-59 | -1.69E-46 |
| MS.gene056366 | MS.gene061333 | 0.802448 | 5.58E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene061333 | 0.814067 | 1.86E-51 | -1.69E-46 |
| MS.gene056553 | MS.gene061333 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene056643 | MS.gene061333 | 0.815551 | 8.72E-52 | -1.69E-46 |
| MS.gene056952 | MS.gene061333 | 0.804107 | 2.53E-49 | -1.69E-46 |
| MS.gene057012 | MS.gene061333 | 0.801324 | 9.50E-49 | -1.69E-46 |
| MS.gene057021 | MS.gene061333 | 0.805996 | 1.02E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene061333 | 0.813559 | 2.41E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene061333 | 0.828445 | 8.96E-55 | -1.69E-46 |
| MS.gene057200 | MS.gene061333 | 0.832383 | 9.75E-56 | -1.69E-46 |
| MS.gene057394 | MS.gene061333 | 0.806052 | 9.92E-50 | -1.69E-46 |
| MS.gene057395 | MS.gene061333 | 0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene061333 | 0.844973 | 5.42E-59 | -1.69E-46 |
| MS.gene057639 | MS.gene061333 | 0.813244 | 2.82E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene061333 | 0.81389 | 2.04E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene061333 | 0.811598 | 6.46E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene061333 | 0.814612 | 1.41E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene061333 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene061333 | 0.806362 | 8.54E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene061333 | 0.810911 | 9.11E-51 | -1.69E-46 |
| MS.gene05872 | MS.gene061333 | 0.812036 | 5.19E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene061333 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene058935 | MS.gene061333 | 0.801928 | 7.14E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene061333 | 0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene059128 | MS.gene061333 | 0.852952 | 3.29E-61 | -1.69E-46 |
| MS.gene059161 | MS.gene061333 | 0.819335 | 1.23E-52 | -1.69E-46 |
| MS.gene059382 | MS.gene061333 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene061333 | 0.871351 | 7.30E-67 | -1.69E-46 |
| MS.gene059609 | MS.gene061333 | 0.839095 | 1.94E-57 | -1.69E-46 |
| MS.gene059725 | MS.gene061333 | 0.800883 | 1.17E-48 | -1.69E-46 |
| MS.gene059789 | MS.gene061333 | 0.827566 | 1.46E-54 | -1.69E-46 |
| MS.gene060137 | MS.gene061333 | -0.85283 | 3.57E-61 | -1.69E-46 |
| MS.gene060322 | MS.gene061333 | 0.850793 | 1.35E-60 | -1.69E-46 |
| MS.gene060683 | MS.gene061333 | 0.818557 | 1.84E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene061333 | 0.820322 | 7.29E-53 | -1.69E-46 |
| MS.gene060781 | MS.gene061333 | 0.809818 | 1.57E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene061333 | 0.809088 | 2.25E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene061333 | 0.845052 | 5.17E-59 | -1.69E-46 |
| MS.gene060918 | MS.gene061333 | 0.808047 | 3.75E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene061333 | 0.825776 | 3.90E-54 | -1.69E-46 |
| MS.gene061040 | MS.gene061333 | -0.832845 | 7.49E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene061333 | -0.868254 | 7.49E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 52 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAGCATTATCAGAATATT+TGG | 0.154201 | 8.1:-87229372 | MS.gene061333:CDS |
| CTTGATACTGACATTGTTCT+AGG | 0.157660 | 8.1:+87229593 | None:intergenic |
| ATTAACTTTGTTACTGTTCT+TGG | 0.162375 | 8.1:+87229818 | None:intergenic |
| ACCATTTCAAAGCGCGTCTA+AGG | 0.318480 | 8.1:-87229673 | MS.gene061333:CDS |
| ACGTGAAACTAAGCTTGTTT+TGG | 0.326591 | 8.1:-87230053 | MS.gene061333:CDS |
| GACTTTGTAGTTCTTGATCA+TGG | 0.348123 | 8.1:+87230483 | None:intergenic |
| TCTTTATTTCCAAGGTGAAT+TGG | 0.350401 | 8.1:+87230583 | None:intergenic |
| ATCAAATCAGTGAAATGTTT+AGG | 0.353279 | 8.1:+87229905 | None:intergenic |
| CTGCTAAACTTAACTCTTCA+AGG | 0.360388 | 8.1:+87230686 | None:intergenic |
| TTACCTTCCAGCTGATTTAA+CGG | 0.361070 | 8.1:-87229873 | MS.gene061333:CDS |
| AACATTTCACTGATTTGATA+AGG | 0.390830 | 8.1:-87229901 | MS.gene061333:CDS |
| ACTCCTCAATTAATCTCAAT+TGG | 0.392658 | 8.1:-87230607 | MS.gene061333:CDS |
| GTAACAAAGTTAATAGATTC+TGG | 0.396787 | 8.1:-87229809 | MS.gene061333:CDS |
| AAGAAACCGTTCATGGAAAT+CGG | 0.400354 | 8.1:-87230338 | MS.gene061333:CDS |
| GAAGTGGCAGTGCTTGTTAA+TGG | 0.401978 | 8.1:-87229454 | MS.gene061333:CDS |
| ATAGACGCTCATAGAAGAAA+TGG | 0.406927 | 8.1:+87230524 | None:intergenic |
| TCCTTAGACGCGCTTTGAAA+TGG | 0.415205 | 8.1:+87229672 | None:intergenic |
| TCTAAATCCGTTAAATCAGC+TGG | 0.442093 | 8.1:+87229866 | None:intergenic |
| AGCAATAACCATAGGTTTCA+AGG | 0.443493 | 8.1:-87229929 | MS.gene061333:CDS |
| CAGAGAAAATAACTCAGAAA+TGG | 0.447228 | 8.1:+87229728 | None:intergenic |
| ATCTGAAACTGAATATGAAA+TGG | 0.454211 | 8.1:-87230734 | MS.gene061333:CDS |
| GTTTAGGACCTTGAAACCTA+TGG | 0.455366 | 8.1:+87229921 | None:intergenic |
| AGAGCTAGTTCTACTTTGGT+TGG | 0.457619 | 8.1:-87229301 | MS.gene061333:CDS |
| GGAAGTGATTGTGCATGAAA+TGG | 0.461128 | 8.1:-87229488 | MS.gene061333:CDS |
| GGACCAATTGAGATTAATTG+AGG | 0.464532 | 8.1:+87230604 | None:intergenic |
| TTGGAGAGCTAGTTCTACTT+TGG | 0.466290 | 8.1:-87229305 | MS.gene061333:CDS |
| AGTGGCTTAATTGGTGATGT+TGG | 0.493716 | 8.1:-87229998 | MS.gene061333:CDS |
| GTTGAAGTTCTTTATTTCCA+AGG | 0.495312 | 8.1:+87230575 | None:intergenic |
| TCTAAGGATTCCGCAGTTGA+AGG | 0.499213 | 8.1:-87229657 | MS.gene061333:CDS |
| AGCAGATTGTAGCATCTACA+AGG | 0.504878 | 8.1:-87230668 | MS.gene061333:CDS |
| ATTACATTCTAACACAAGCT+TGG | 0.511928 | 8.1:-87230252 | MS.gene061333:CDS |
| TTGATACTGACATTGTTCTA+GGG | 0.522905 | 8.1:+87229594 | None:intergenic |
| ATGTTTCAATCTAAATGACT+TGG | 0.523292 | 8.1:+87230282 | None:intergenic |
| GAAGTGATTGTGCATGAAAT+GGG | 0.523677 | 8.1:-87229487 | MS.gene061333:CDS |
| TTAACGGATTTAGAAAAGAG+TGG | 0.543465 | 8.1:-87229857 | MS.gene061333:CDS |
| CACCAACCACAATGCAGCCA+TGG | 0.546124 | 8.1:+87229342 | None:intergenic |
| TGGTTCAAACATGAAAATGA+AGG | 0.548134 | 8.1:+87229692 | None:intergenic |
| TCAATTGGTCCAATTCACCT+TGG | 0.558480 | 8.1:-87230592 | MS.gene061333:CDS |
| TTAATTGGTGATGTTGGTAG+TGG | 0.564871 | 8.1:-87229992 | MS.gene061333:CDS |
| ACCACAATGCAGCCATGGTA+CGG | 0.571593 | 8.1:+87229347 | None:intergenic |
| ATGTATCCGATTTCCATGAA+CGG | 0.580945 | 8.1:+87230332 | None:intergenic |
| TGGTCTTTGTAAACATGTTG+TGG | 0.582048 | 8.1:-87229434 | MS.gene061333:CDS |
| AATCTATGAGCAATAACCAT+AGG | 0.583238 | 8.1:-87229937 | MS.gene061333:CDS |
| GACATTGTTCTAGGGCAATG+AGG | 0.593451 | 8.1:+87229602 | None:intergenic |
| GGCTCAGCAAAAGCATCACA+AGG | 0.605591 | 8.1:-87230231 | MS.gene061333:CDS |
| TACCATGGCTGCATTGTGGT+TGG | 0.611964 | 8.1:-87229344 | MS.gene061333:CDS |
| AATCCGTTAAATCAGCTGGA+AGG | 0.622325 | 8.1:+87229870 | None:intergenic |
| AATGGGAAGTGATAAAGAAG+TGG | 0.638138 | 8.1:-87229470 | MS.gene061333:CDS |
| GAATATTTGGAACCGTACCA+TGG | 0.643141 | 8.1:-87229359 | MS.gene061333:CDS |
| GTGTGATCAACCTTCAACTG+CGG | 0.710202 | 8.1:+87229647 | None:intergenic |
| GCTCAGCAAAAGCATCACAA+GGG | 0.717992 | 8.1:-87230230 | MS.gene061333:CDS |
| ACCGTACCATGGCTGCATTG+TGG | 0.722473 | 8.1:-87229348 | MS.gene061333:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGCATTATCAGAATATT+TGG | - | chr8.1:87230648-87230667 | MS.gene061333:CDS | 20.0% |
| !! | GAAACATAATTGCATATATA+AGG | + | chr8.1:87230458-87230477 | None:intergenic | 20.0% |
| !!! | AAATTTTTCTTTGCTTATGT+TGG | + | chr8.1:87229615-87229634 | None:intergenic | 20.0% |
| !!! | AAGAAATATTATTTTGTGAG+TGG | - | chr8.1:87230004-87230023 | MS.gene061333:CDS | 20.0% |
| !!! | AATTTTTCTTTGCTTATGTT+GGG | + | chr8.1:87229614-87229633 | None:intergenic | 20.0% |
| !!! | TTTATCAGAATGTTTTTTCT+TGG | + | chr8.1:87230065-87230084 | None:intergenic | 20.0% |
| ! | ATCAAATCAGTGAAATGTTT+AGG | + | chr8.1:87230118-87230137 | None:intergenic | 25.0% |
| ! | ATGTTTCAATCTAAATGACT+TGG | + | chr8.1:87229741-87229760 | None:intergenic | 25.0% |
| ! | ATTAACTTTGTTACTGTTCT+TGG | + | chr8.1:87230205-87230224 | None:intergenic | 25.0% |
| ! | CATAAGCAAAGAAAAATTTG+TGG | - | chr8.1:87229616-87229635 | MS.gene061333:CDS | 25.0% |
| ! | GTAACAAAGTTAATAGATTC+TGG | - | chr8.1:87230211-87230230 | MS.gene061333:CDS | 25.0% |
| !! | ATCTGAAACTGAATATGAAA+TGG | - | chr8.1:87229286-87229305 | MS.gene061333:CDS | 25.0% |
| !! | ATTTGTGGAAACAATTTTGT+TGG | - | chr8.1:87229631-87229650 | MS.gene061333:CDS | 25.0% |
| !! | CAAGATCAAGAAAACTTTTA+TGG | + | chr8.1:87229904-87229923 | None:intergenic | 25.0% |
| !!! | AACATTTCACTGATTTGATA+AGG | - | chr8.1:87230119-87230138 | MS.gene061333:CDS | 25.0% |
| AATCAACATCAACTTGTGTA+TGG | + | chr8.1:87230499-87230518 | None:intergenic | 30.0% | |
| AATCTATGAGCAATAACCAT+AGG | - | chr8.1:87230083-87230102 | MS.gene061333:CDS | 30.0% | |
| ACTCCTCAATTAATCTCAAT+TGG | - | chr8.1:87229413-87229432 | MS.gene061333:CDS | 30.0% | |
| AGATTCATCAGCACAAAAAA+AGG | + | chr8.1:87229842-87229861 | None:intergenic | 30.0% | |
| ATTACATTCTAACACAAGCT+TGG | - | chr8.1:87229768-87229787 | MS.gene061333:CDS | 30.0% | |
| CAATGCAACAACACAAAAAA+AGG | - | chr8.1:87229468-87229487 | MS.gene061333:CDS | 30.0% | |
| CAGAGAAAATAACTCAGAAA+TGG | + | chr8.1:87230295-87230314 | None:intergenic | 30.0% | |
| TGGTTCAAACATGAAAATGA+AGG | + | chr8.1:87230331-87230350 | None:intergenic | 30.0% | |
| TTGATACTGACATTGTTCTA+GGG | + | chr8.1:87230429-87230448 | None:intergenic | 30.0% | |
| ! | GTTGAAGTTCTTTATTTCCA+AGG | + | chr8.1:87229448-87229467 | None:intergenic | 30.0% |
| ! | TATTTTGTGAGTGGCTTAAT+TGG | - | chr8.1:87230013-87230032 | MS.gene061333:CDS | 30.0% |
| ! | TCTTTATTTCCAAGGTGAAT+TGG | + | chr8.1:87229440-87229459 | None:intergenic | 30.0% |
| ! | TTTTGTTAAGAAACCGTTCA+TGG | - | chr8.1:87229675-87229694 | MS.gene061333:CDS | 30.0% |
| !! | AAGCTTCTTGTTTCACTTTT+CGG | + | chr8.1:87229391-87229410 | None:intergenic | 30.0% |
| !! | ACAAGTTGATGTTGATTTGT+TGG | - | chr8.1:87230502-87230521 | MS.gene061333:CDS | 30.0% |
| !! | CACAACAGAATGTGTTTTTA+AGG | - | chr8.1:87230393-87230412 | MS.gene061333:CDS | 30.0% |
| !! | TTAACGGATTTAGAAAAGAG+TGG | - | chr8.1:87230163-87230182 | MS.gene061333:CDS | 30.0% |
| !!! | CTTTTTTTGTGTTGTTGCAT+TGG | + | chr8.1:87229470-87229489 | None:intergenic | 30.0% |
| AAGAAACCGTTCATGGAAAT+CGG | - | chr8.1:87229682-87229701 | MS.gene061333:CDS | 35.0% | |
| AATGGGAAGTGATAAAGAAG+TGG | - | chr8.1:87230550-87230569 | MS.gene061333:CDS | 35.0% | |
| AGCAATAACCATAGGTTTCA+AGG | - | chr8.1:87230091-87230110 | MS.gene061333:CDS | 35.0% | |
| ATAGACGCTCATAGAAGAAA+TGG | + | chr8.1:87229499-87229518 | None:intergenic | 35.0% | |
| ATGTATCCGATTTCCATGAA+CGG | + | chr8.1:87229691-87229710 | None:intergenic | 35.0% | |
| CTGCTAAACTTAACTCTTCA+AGG | + | chr8.1:87229337-87229356 | None:intergenic | 35.0% | |
| CTTGATACTGACATTGTTCT+AGG | + | chr8.1:87230430-87230449 | None:intergenic | 35.0% | |
| CTTGCTAGAATTCTCTTCTA+AGG | - | chr8.1:87230782-87230801 | MS.gene061333:CDS | 35.0% | |
| GAAGTGATTGTGCATGAAAT+GGG | - | chr8.1:87230533-87230552 | MS.gene061333:CDS | 35.0% | |
| GACTTTGTAGTTCTTGATCA+TGG | + | chr8.1:87229540-87229559 | None:intergenic | 35.0% | |
| GGACCAATTGAGATTAATTG+AGG | + | chr8.1:87229419-87229438 | None:intergenic | 35.0% | |
| TCTAAATCCGTTAAATCAGC+TGG | + | chr8.1:87230157-87230176 | None:intergenic | 35.0% | |
| TGGTCTTTGTAAACATGTTG+TGG | - | chr8.1:87230586-87230605 | MS.gene061333:CDS | 35.0% | |
| ! | TTACCTTCCAGCTGATTTAA+CGG | - | chr8.1:87230147-87230166 | MS.gene061333:CDS | 35.0% |
| !! | ACGTGAAACTAAGCTTGTTT+TGG | - | chr8.1:87229967-87229986 | MS.gene061333:CDS | 35.0% |
| !! | CTGAGTTATTTTCTCTGCTT+AGG | - | chr8.1:87230298-87230317 | MS.gene061333:CDS | 35.0% |
| !! | TGGTGTATTTTAGAGATGCT+TGG | - | chr8.1:87230696-87230715 | MS.gene061333:CDS | 35.0% |
| !! | TTAATTGGTGATGTTGGTAG+TGG | - | chr8.1:87230028-87230047 | MS.gene061333:CDS | 35.0% |
| !!! | CTTCTTTTTTGTCGTCGTTA+GGG | + | chr8.1:87229880-87229899 | None:intergenic | 35.0% |
| !!! | GTGAGTTTTGAGAAAGTTGT+GGG | - | chr8.1:87230235-87230254 | MS.gene061333:CDS | 35.0% |
| !!! | TCTTCTTTTTTGTCGTCGTT+AGG | + | chr8.1:87229881-87229900 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGAGAAAGTTGTG+GGG | - | chr8.1:87230236-87230255 | MS.gene061333:CDS | 35.0% |
| !!! | TGTGAGTTTTGAGAAAGTTG+TGG | - | chr8.1:87230234-87230253 | MS.gene061333:CDS | 35.0% |
| AATCCGTTAAATCAGCTGGA+AGG | + | chr8.1:87230153-87230172 | None:intergenic | 40.0% | |
| AGCAGATTGTAGCATCTACA+AGG | - | chr8.1:87229352-87229371 | MS.gene061333:CDS | 40.0% | |
| GGAAGTGATTGTGCATGAAA+TGG | - | chr8.1:87230532-87230551 | MS.gene061333:CDS | 40.0% | |
| TCAATTGGTCCAATTCACCT+TGG | - | chr8.1:87229428-87229447 | MS.gene061333:CDS | 40.0% | |
| ! | CACAAGGGACTTGATTTTGT+TGG | - | chr8.1:87229805-87229824 | MS.gene061333:CDS | 40.0% |
| ! | GAATATTTGGAACCGTACCA+TGG | - | chr8.1:87230661-87230680 | MS.gene061333:CDS | 40.0% |
| ! | GTTTAGGACCTTGAAACCTA+TGG | + | chr8.1:87230102-87230121 | None:intergenic | 40.0% |
| !! | AGAGCTAGTTCTACTTTGGT+TGG | - | chr8.1:87230719-87230738 | MS.gene061333:CDS | 40.0% |
| !! | AGTGGCTTAATTGGTGATGT+TGG | - | chr8.1:87230022-87230041 | MS.gene061333:CDS | 40.0% |
| !! | TGTTGATTTGTTGGTCGAGA+AGG | - | chr8.1:87230511-87230530 | MS.gene061333:CDS | 40.0% |
| !! | TTCACTTTTCGGAGATTGTG+AGG | + | chr8.1:87229380-87229399 | None:intergenic | 40.0% |
| !! | TTGGAGAGCTAGTTCTACTT+TGG | - | chr8.1:87230715-87230734 | MS.gene061333:CDS | 40.0% |
| !!! | GTTGGATGCTGTTTTCATCA+TGG | - | chr8.1:87229649-87229668 | MS.gene061333:CDS | 40.0% |
| ACCATTTCAAAGCGCGTCTA+AGG | - | chr8.1:87230347-87230366 | MS.gene061333:CDS | 45.0% | |
| GTGTGATCAACCTTCAACTG+CGG | + | chr8.1:87230376-87230395 | None:intergenic | 45.0% | |
| TCTAAGGATTCCGCAGTTGA+AGG | - | chr8.1:87230363-87230382 | MS.gene061333:CDS | 45.0% | |
| ! | GAAGTGGCAGTGCTTGTTAA+TGG | - | chr8.1:87230566-87230585 | MS.gene061333:CDS | 45.0% |
| !! | GACATTGTTCTAGGGCAATG+AGG | + | chr8.1:87230421-87230440 | None:intergenic | 45.0% |
| !! | GCTCAGCAAAAGCATCACAA+GGG | - | chr8.1:87229790-87229809 | MS.gene061333:CDS | 45.0% |
| !! | TCCTTAGACGCGCTTTGAAA+TGG | + | chr8.1:87230351-87230370 | None:intergenic | 45.0% |
| ACCACAATGCAGCCATGGTA+CGG | + | chr8.1:87230676-87230695 | None:intergenic | 50.0% | |
| TACCATGGCTGCATTGTGGT+TGG | - | chr8.1:87230676-87230695 | MS.gene061333:CDS | 50.0% | |
| !! | GGCTCAGCAAAAGCATCACA+AGG | - | chr8.1:87229789-87229808 | MS.gene061333:CDS | 50.0% |
| ACCGTACCATGGCTGCATTG+TGG | - | chr8.1:87230672-87230691 | MS.gene061333:CDS | 55.0% | |
| CACCAACCACAATGCAGCCA+TGG | + | chr8.1:87230681-87230700 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 87229240 | 87230802 | 87229240 | ID=MS.gene061333 |
| chr8.1 | mRNA | 87229240 | 87230802 | 87229240 | ID=MS.gene061333.t1;Parent=MS.gene061333 |
| chr8.1 | exon | 87229601 | 87230802 | 87229601 | ID=MS.gene061333.t1.exon1;Parent=MS.gene061333.t1 |
| chr8.1 | CDS | 87229601 | 87230802 | 87229601 | ID=cds.MS.gene061333.t1;Parent=MS.gene061333.t1 |
| chr8.1 | exon | 87229240 | 87229509 | 87229240 | ID=MS.gene061333.t1.exon2;Parent=MS.gene061333.t1 |
| chr8.1 | CDS | 87229240 | 87229509 | 87229240 | ID=cds.MS.gene061333.t1;Parent=MS.gene061333.t1 |
| Gene Sequence |
| Protein sequence |
