Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37517.t1 | RHN40101.1 | 98.3 | 573 | 10 | 0 | 1 | 573 | 40 | 612 | 0.00E+00 | 1146.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37517.t1 | Q9LE59 | 75.6 | 573 | 137 | 1 | 1 | 573 | 104 | 673 | 1.6e-260 | 899.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37517.t1 | A0A396GIV4 | 98.3 | 573 | 10 | 0 | 1 | 573 | 40 | 612 | 0.0e+00 | 1146.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene37517 | 0.83393 | 4.02E-56 | -1.69E-46 |
| MS.gene049151 | MS.gene37517 | 0.834166 | 3.51E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene37517 | 0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene049260 | MS.gene37517 | 0.808245 | 3.40E-50 | -1.69E-46 |
| MS.gene049426 | MS.gene37517 | 0.828861 | 7.11E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene37517 | 0.819999 | 8.64E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene37517 | 0.830136 | 3.48E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene37517 | 0.824082 | 9.79E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene37517 | 0.822171 | 2.73E-53 | -1.69E-46 |
| MS.gene050438 | MS.gene37517 | 0.801484 | 8.81E-49 | -1.69E-46 |
| MS.gene050516 | MS.gene37517 | 0.8463 | 2.37E-59 | -1.69E-46 |
| MS.gene050558 | MS.gene37517 | 0.824751 | 6.81E-54 | -1.69E-46 |
| MS.gene050560 | MS.gene37517 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene37517 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene37517 | 0.81213 | 4.95E-51 | -1.69E-46 |
| MS.gene050762 | MS.gene37517 | 0.817625 | 2.99E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene37517 | 0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene37517 | 0.833215 | 6.06E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene37517 | 0.819055 | 1.42E-52 | -1.69E-46 |
| MS.gene050820 | MS.gene37517 | 0.830981 | 2.16E-55 | -1.69E-46 |
| MS.gene050959 | MS.gene37517 | 0.804139 | 2.49E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene37517 | -0.801001 | 1.11E-48 | -1.69E-46 |
| MS.gene051663 | MS.gene37517 | 0.806112 | 9.63E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene37517 | 0.835499 | 1.62E-56 | -1.69E-46 |
| MS.gene052207 | MS.gene37517 | 0.804861 | 1.76E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene37517 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene052323 | MS.gene37517 | 0.815347 | 9.69E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene37517 | 0.83063 | 2.64E-55 | -1.69E-46 |
| MS.gene053074 | MS.gene37517 | 0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene053184 | MS.gene37517 | 0.805427 | 1.34E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene37517 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene053555 | MS.gene37517 | 0.835987 | 1.22E-56 | -1.69E-46 |
| MS.gene053565 | MS.gene37517 | 0.84346 | 1.38E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene37517 | 0.842719 | 2.18E-58 | -1.69E-46 |
| MS.gene054379 | MS.gene37517 | 0.846444 | 2.16E-59 | -1.69E-46 |
| MS.gene054467 | MS.gene37517 | 0.808559 | 2.92E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene37517 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene37517 | 0.826321 | 2.89E-54 | -1.69E-46 |
| MS.gene054833 | MS.gene37517 | 0.807456 | 5.01E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene37517 | 0.813602 | 2.36E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene37517 | 0.827003 | 1.99E-54 | -1.69E-46 |
| MS.gene055303 | MS.gene37517 | 0.80243 | 5.63E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene37517 | 0.809319 | 2.01E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene37517 | 0.806713 | 7.20E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene37517 | 0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene37517 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene055804 | MS.gene37517 | 0.817271 | 3.60E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene37517 | 0.806123 | 9.58E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene37517 | 0.808694 | 2.73E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene37517 | 0.841802 | 3.81E-58 | -1.69E-46 |
| MS.gene057200 | MS.gene37517 | 0.821143 | 4.72E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene37517 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene057394 | MS.gene37517 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene37517 | 0.864834 | 9.14E-65 | -1.69E-46 |
| MS.gene058168 | MS.gene37517 | 0.805096 | 1.57E-49 | -1.69E-46 |
| MS.gene058833 | MS.gene37517 | 0.825884 | 3.67E-54 | -1.69E-46 |
| MS.gene058982 | MS.gene37517 | 0.825831 | 3.78E-54 | -1.69E-46 |
| MS.gene059124 | MS.gene37517 | 0.808704 | 2.72E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene37517 | 0.841835 | 3.73E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene37517 | 0.815524 | 8.85E-52 | -1.69E-46 |
| MS.gene060480 | MS.gene37517 | 0.886807 | 2.48E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37517.t1 | MTR_8g033360 | 98.324 | 537 | 9 | 0 | 1 | 537 | 61 | 597 | 0.0 | 1101 |
| MS.gene37517.t1 | MTR_7g075840 | 83.944 | 573 | 89 | 2 | 1 | 573 | 95 | 664 | 0.0 | 993 |
| MS.gene37517.t1 | MTR_3g107930 | 63.931 | 524 | 189 | 0 | 48 | 571 | 140 | 663 | 0.0 | 723 |
| MS.gene37517.t1 | MTR_3g107930 | 63.931 | 524 | 189 | 0 | 48 | 571 | 63 | 586 | 0.0 | 721 |
| MS.gene37517.t1 | MTR_2g027740 | 54.007 | 574 | 253 | 4 | 3 | 572 | 100 | 666 | 0.0 | 637 |
| MS.gene37517.t1 | MTR_8g092000 | 56.818 | 484 | 199 | 2 | 93 | 573 | 104 | 580 | 0.0 | 591 |
| MS.gene37517.t1 | MTR_2g015550 | 48.936 | 470 | 227 | 5 | 110 | 572 | 70 | 533 | 1.50e-168 | 489 |
| MS.gene37517.t1 | MTR_7g055600 | 56.691 | 411 | 172 | 4 | 164 | 571 | 25 | 432 | 7.70e-160 | 463 |
| MS.gene37517.t1 | MTR_7g057530 | 56.691 | 411 | 172 | 4 | 164 | 571 | 25 | 432 | 7.70e-160 | 463 |
| MS.gene37517.t1 | MTR_4g109890 | 47.414 | 464 | 228 | 4 | 116 | 571 | 79 | 534 | 1.26e-155 | 456 |
| MS.gene37517.t1 | MTR_2g461670 | 46.467 | 467 | 240 | 4 | 110 | 571 | 128 | 589 | 6.98e-154 | 454 |
| MS.gene37517.t1 | MTR_7g096160 | 45.591 | 465 | 223 | 3 | 111 | 572 | 216 | 653 | 5.12e-150 | 446 |
| MS.gene37517.t1 | MTR_6g016380 | 47.558 | 471 | 227 | 8 | 119 | 571 | 85 | 553 | 4.55e-148 | 438 |
| MS.gene37517.t1 | MTR_2g006790 | 44.161 | 471 | 224 | 7 | 110 | 572 | 70 | 509 | 6.19e-140 | 416 |
| MS.gene37517.t1 | MTR_1g070490 | 42.105 | 475 | 237 | 8 | 104 | 573 | 158 | 599 | 1.54e-126 | 385 |
| MS.gene37517.t1 | MTR_7g012370 | 44.254 | 409 | 201 | 8 | 174 | 560 | 121 | 524 | 4.87e-118 | 361 |
| MS.gene37517.t1 | MTR_2g082650 | 42.289 | 402 | 215 | 5 | 187 | 571 | 9 | 410 | 4.74e-116 | 351 |
| MS.gene37517.t1 | MTR_2g082650 | 41.106 | 416 | 228 | 5 | 173 | 571 | 124 | 539 | 9.24e-115 | 352 |
| MS.gene37517.t1 | MTR_6g013840 | 44.019 | 418 | 215 | 7 | 174 | 573 | 116 | 532 | 1.02e-111 | 343 |
| MS.gene37517.t1 | MTR_4g133570 | 39.753 | 405 | 227 | 4 | 184 | 571 | 58 | 462 | 1.67e-107 | 330 |
| MS.gene37517.t1 | MTR_3g452360 | 36.865 | 453 | 253 | 10 | 135 | 571 | 93 | 528 | 3.41e-94 | 298 |
| MS.gene37517.t1 | MTR_3g452360 | 38.701 | 385 | 212 | 7 | 204 | 571 | 2 | 379 | 3.87e-92 | 288 |
| MS.gene37517.t1 | MTR_7g012370 | 43.558 | 326 | 159 | 7 | 174 | 479 | 121 | 441 | 2.80e-85 | 273 |
| MS.gene37517.t1 | MTR_7g074680 | 32.165 | 485 | 297 | 7 | 97 | 572 | 103 | 564 | 1.22e-79 | 261 |
| MS.gene37517.t1 | MTR_7g074680 | 32.165 | 485 | 297 | 7 | 97 | 572 | 143 | 604 | 3.70e-79 | 261 |
| MS.gene37517.t1 | MTR_7g074680 | 32.165 | 485 | 297 | 7 | 97 | 572 | 163 | 624 | 4.39e-79 | 261 |
| MS.gene37517.t1 | MTR_7g074680 | 32.165 | 485 | 297 | 7 | 97 | 572 | 163 | 624 | 4.67e-79 | 261 |
| MS.gene37517.t1 | MTR_7g074680 | 32.165 | 485 | 297 | 7 | 97 | 572 | 183 | 644 | 6.74e-79 | 261 |
| MS.gene37517.t1 | MTR_7g074680 | 31.873 | 502 | 293 | 10 | 97 | 572 | 183 | 661 | 5.87e-76 | 254 |
| MS.gene37517.t1 | MTR_4g133942 | 56.219 | 201 | 58 | 3 | 375 | 572 | 160 | 333 | 3.47e-68 | 224 |
| MS.gene37517.t1 | MTR_6g008900 | 26.923 | 338 | 198 | 12 | 248 | 566 | 64 | 371 | 3.93e-24 | 104 |
| MS.gene37517.t1 | MTR_4g071620 | 26.923 | 338 | 198 | 12 | 248 | 566 | 64 | 371 | 3.93e-24 | 104 |
| MS.gene37517.t1 | MTR_7g094230 | 32.571 | 175 | 113 | 4 | 377 | 546 | 151 | 325 | 4.81e-22 | 98.2 |
| MS.gene37517.t1 | MTR_5g036580 | 27.928 | 333 | 190 | 14 | 244 | 561 | 62 | 359 | 1.26e-21 | 97.8 |
| MS.gene37517.t1 | MTR_4g118030 | 27.799 | 259 | 156 | 8 | 319 | 546 | 62 | 320 | 5.70e-21 | 95.1 |
| MS.gene37517.t1 | MTR_3g092310 | 31.122 | 196 | 127 | 5 | 377 | 564 | 140 | 335 | 6.34e-21 | 94.7 |
| MS.gene37517.t1 | MTR_7g109210 | 27.358 | 318 | 181 | 11 | 258 | 563 | 74 | 353 | 8.03e-21 | 94.7 |
| MS.gene37517.t1 | MTR_3g111600 | 29.016 | 193 | 124 | 6 | 377 | 558 | 80 | 270 | 3.48e-19 | 88.6 |
| MS.gene37517.t1 | MTR_8g078240 | 28.230 | 209 | 133 | 6 | 345 | 543 | 115 | 316 | 2.64e-18 | 87.0 |
| MS.gene37517.t1 | MTR_1g021855 | 29.381 | 194 | 123 | 6 | 377 | 558 | 165 | 356 | 2.42e-17 | 84.3 |
| MS.gene37517.t1 | MTR_1g089820 | 32.571 | 175 | 113 | 4 | 377 | 546 | 154 | 328 | 2.42e-16 | 81.3 |
| MS.gene37517.t1 | MTR_5g019220 | 30.636 | 173 | 114 | 5 | 377 | 543 | 166 | 338 | 1.08e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37517.t1 | AT3G61130 | 75.567 | 573 | 137 | 1 | 1 | 573 | 104 | 673 | 0.0 | 926 |
| MS.gene37517.t1 | AT4G38270 | 56.419 | 592 | 234 | 4 | 1 | 573 | 90 | 676 | 0.0 | 711 |
| MS.gene37517.t1 | AT4G38270 | 56.208 | 596 | 233 | 4 | 1 | 573 | 90 | 680 | 0.0 | 709 |
| MS.gene37517.t1 | AT2G46480 | 59.434 | 530 | 210 | 3 | 45 | 573 | 15 | 540 | 0.0 | 665 |
| MS.gene37517.t1 | AT2G46480 | 59.434 | 530 | 210 | 3 | 45 | 573 | 28 | 553 | 0.0 | 664 |
| MS.gene37517.t1 | AT5G47780 | 62.256 | 461 | 170 | 1 | 112 | 572 | 159 | 615 | 0.0 | 637 |
| MS.gene37517.t1 | AT2G46480 | 56.038 | 530 | 203 | 4 | 45 | 573 | 28 | 528 | 0.0 | 609 |
| MS.gene37517.t1 | AT2G46480 | 56.038 | 530 | 203 | 4 | 45 | 573 | 15 | 515 | 0.0 | 608 |
| MS.gene37517.t1 | AT3G25140 | 55.924 | 422 | 177 | 5 | 156 | 571 | 139 | 557 | 6.53e-171 | 496 |
| MS.gene37517.t1 | AT1G18580 | 48.195 | 471 | 230 | 5 | 107 | 569 | 70 | 534 | 1.25e-162 | 474 |
| MS.gene37517.t1 | AT2G20810 | 48.291 | 468 | 229 | 6 | 113 | 572 | 74 | 536 | 1.98e-153 | 451 |
| MS.gene37517.t1 | AT3G02350 | 49.467 | 469 | 219 | 6 | 120 | 571 | 92 | 559 | 1.58e-150 | 444 |
| MS.gene37517.t1 | AT2G30575 | 43.777 | 466 | 233 | 3 | 111 | 573 | 171 | 610 | 6.69e-142 | 424 |
| MS.gene37517.t1 | AT1G06780 | 44.086 | 465 | 232 | 2 | 111 | 572 | 149 | 588 | 2.22e-140 | 419 |
| MS.gene37517.t1 | AT1G06780 | 44.086 | 465 | 232 | 2 | 111 | 572 | 162 | 601 | 3.07e-140 | 419 |
| MS.gene37517.t1 | AT3G01040 | 44.498 | 418 | 215 | 5 | 173 | 573 | 115 | 532 | 5.62e-119 | 362 |
| MS.gene37517.t1 | AT3G01040 | 44.498 | 418 | 215 | 5 | 173 | 573 | 115 | 532 | 5.62e-119 | 362 |
| MS.gene37517.t1 | AT5G15470 | 45.084 | 417 | 212 | 5 | 174 | 573 | 116 | 532 | 2.11e-118 | 361 |
| MS.gene37517.t1 | AT5G54690 | 39.252 | 428 | 236 | 6 | 168 | 571 | 105 | 532 | 2.14e-112 | 345 |
| MS.gene37517.t1 | AT3G01040 | 41.627 | 418 | 194 | 6 | 173 | 573 | 115 | 499 | 2.88e-103 | 321 |
| MS.gene37517.t1 | AT2G38650 | 34.576 | 483 | 283 | 9 | 97 | 572 | 162 | 618 | 5.55e-92 | 295 |
| MS.gene37517.t1 | AT2G38650 | 34.576 | 483 | 283 | 9 | 97 | 572 | 162 | 618 | 5.55e-92 | 295 |
| MS.gene37517.t1 | AT3G58790 | 37.931 | 406 | 224 | 8 | 188 | 571 | 7 | 406 | 1.59e-89 | 282 |
| MS.gene37517.t1 | AT3G58790 | 36.385 | 426 | 243 | 8 | 168 | 571 | 119 | 538 | 2.19e-88 | 283 |
| MS.gene37517.t1 | AT2G38650 | 35.219 | 389 | 220 | 8 | 97 | 479 | 162 | 524 | 5.03e-70 | 235 |
| MS.gene37517.t1 | AT1G02720 | 27.900 | 319 | 185 | 11 | 258 | 565 | 77 | 361 | 2.21e-22 | 99.4 |
| MS.gene37517.t1 | AT1G02720 | 27.900 | 319 | 185 | 11 | 258 | 565 | 77 | 361 | 2.21e-22 | 99.4 |
| MS.gene37517.t1 | AT4G02130 | 26.543 | 324 | 193 | 10 | 253 | 565 | 57 | 346 | 5.92e-22 | 97.8 |
| MS.gene37517.t1 | AT4G02130 | 26.543 | 324 | 193 | 10 | 253 | 565 | 57 | 346 | 5.92e-22 | 97.8 |
| MS.gene37517.t1 | AT4G02130 | 26.543 | 324 | 193 | 10 | 253 | 565 | 57 | 346 | 5.92e-22 | 97.8 |
| MS.gene37517.t1 | AT3G62660 | 26.498 | 317 | 185 | 10 | 258 | 563 | 79 | 358 | 8.89e-22 | 97.8 |
| MS.gene37517.t1 | AT3G06260 | 30.857 | 175 | 116 | 3 | 377 | 546 | 150 | 324 | 9.48e-22 | 97.4 |
| MS.gene37517.t1 | AT1G70090 | 25.868 | 317 | 194 | 10 | 258 | 563 | 78 | 364 | 1.94e-21 | 97.1 |
| MS.gene37517.t1 | AT1G70090 | 25.868 | 317 | 194 | 10 | 258 | 563 | 78 | 364 | 1.94e-21 | 97.1 |
| MS.gene37517.t1 | AT3G28340 | 29.958 | 237 | 149 | 9 | 343 | 567 | 126 | 357 | 6.28e-21 | 95.1 |
| MS.gene37517.t1 | AT1G24170 | 24.606 | 317 | 198 | 9 | 258 | 563 | 81 | 367 | 3.97e-19 | 90.1 |
| MS.gene37517.t1 | AT1G19300 | 31.429 | 175 | 110 | 5 | 377 | 543 | 150 | 322 | 5.45e-19 | 89.4 |
| MS.gene37517.t1 | AT3G50760 | 27.136 | 199 | 132 | 5 | 375 | 562 | 134 | 330 | 4.58e-16 | 80.1 |
| MS.gene37517.t1 | AT1G13250 | 26.235 | 324 | 196 | 11 | 253 | 566 | 51 | 341 | 1.03e-15 | 79.3 |
Find 118 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTACTGATAAACTCAATTT+TGG | 0.156608 | 8.3:-60386856 | MS.gene37517:CDS |
| TTGAGCATCGAGAGATATTT+TGG | 0.169108 | 8.3:+60386631 | None:intergenic |
| CCAGGACTAATGACATTCTA+TGG | 0.236359 | 8.3:-60386148 | MS.gene37517:CDS |
| AGAAGGATTTGACAGGATTA+TGG | 0.240515 | 8.3:-60386531 | MS.gene37517:CDS |
| TCGTGGCATGTCCTTGGTTT+AGG | 0.294398 | 8.3:-60386103 | MS.gene37517:CDS |
| CGATGTCATCATCAAGAAAA+AGG | 0.314739 | 8.3:+60386560 | None:intergenic |
| TGACAAAGTATCGGCCTTAC+TGG | 0.316170 | 8.3:-60385991 | MS.gene37517:CDS |
| TCTAATCTAGGATAAACTTC+TGG | 0.325504 | 8.3:+60386589 | None:intergenic |
| GATCTTCCTTCCTTCACCTT+TGG | 0.325595 | 8.3:+60388750 | None:intergenic |
| ATATCACAAATGGCAAAATA+TGG | 0.336591 | 8.3:-60386317 | MS.gene37517:intron |
| ATTATGGGAAGTTGATCTTC+AGG | 0.339063 | 8.3:-60386515 | MS.gene37517:CDS |
| GATCTTCAGGGGAAAGTAAA+TGG | 0.342595 | 8.3:-60386502 | MS.gene37517:CDS |
| ATCTGTTGAGTCAGCCGTAC+TGG | 0.356409 | 8.3:-60387749 | MS.gene37517:CDS |
| AAAGAGAGTCAACATGCTTT+AGG | 0.370001 | 8.3:-60387571 | MS.gene37517:CDS |
| ATTCTTCTGTTCGGTTTATG+AGG | 0.374399 | 8.3:-60387681 | MS.gene37517:CDS |
| GTGAAGGAAGGAAGATCTTC+AGG | 0.374727 | 8.3:-60388744 | MS.gene37517:intron |
| TATGAGGGACCAGATCATTA+TGG | 0.376231 | 8.3:-60387665 | MS.gene37517:CDS |
| GAAGGATTTGACAGGATTAT+GGG | 0.385355 | 8.3:-60386530 | MS.gene37517:CDS |
| TCTTGTGTAACATGTGTTGT+TGG | 0.388574 | 8.3:+60388777 | None:intergenic |
| TACTGGGTAAATACAGCATT+TGG | 0.389876 | 8.3:-60387732 | MS.gene37517:CDS |
| GACAGGGTGCTTTGGAAGCT+GGG | 0.390513 | 8.3:-60386181 | MS.gene37517:CDS |
| CCCGTGCCTTTGACAGAACT+TGG | 0.391358 | 8.3:+60387404 | None:intergenic |
| TAGTACACGTCAAGAAATAA+AGG | 0.392316 | 8.3:-60387434 | MS.gene37517:CDS |
| AGACAGCTGATGAGAAAGTT+AGG | 0.401919 | 8.3:-60387330 | MS.gene37517:CDS |
| ACATGCCACGATTTATTTAG+TGG | 0.403063 | 8.3:+60386115 | None:intergenic |
| GATTCAAGCTGCCGCAATAC+AGG | 0.410074 | 8.3:+60386736 | None:intergenic |
| AATGCTTGTGGTTGGGCATA+TGG | 0.411331 | 8.3:-60386391 | MS.gene37517:CDS |
| TCAAAGTTTCTTGCAATATG+TGG | 0.412409 | 8.3:+60386418 | None:intergenic |
| TATGCCCAACCACAAGCATT+TGG | 0.412414 | 8.3:+60386394 | None:intergenic |
| AGTTAAGATATTTGTCAAAT+CGG | 0.415942 | 8.3:+60386449 | None:intergenic |
| GTTCCCTAGGAGTGAGAACT+TGG | 0.416886 | 8.3:-60387185 | MS.gene37517:CDS |
| GTGCAGAGGGTCTTACTCAC+TGG | 0.437169 | 8.3:-60388650 | MS.gene37517:intron |
| AGACAGGGTGCTTTGGAAGC+TGG | 0.437302 | 8.3:-60386182 | MS.gene37517:CDS |
| CAAAAGAAACCACATGTTCA+TGG | 0.440335 | 8.3:+60386831 | None:intergenic |
| AATTCCACTTGGTATGGTCT+TGG | 0.447689 | 8.3:+60387267 | None:intergenic |
| TGGGTTTCTATATTTCATAT+TGG | 0.450004 | 8.3:+60386651 | None:intergenic |
| GACTTCAAATGCTGCCTATG+AGG | 0.462603 | 8.3:-60388927 | MS.gene37517:intron |
| AAAATGCTGATTCTTCTGTT+CGG | 0.464420 | 8.3:-60387690 | MS.gene37517:CDS |
| TTAACATATTTAGTCCAGTA+AGG | 0.464878 | 8.3:+60385977 | None:intergenic |
| TAACTTGCATTTCTGCAGAT+AGG | 0.469528 | 8.3:+60385943 | None:intergenic |
| AGGTGGAAAACATGCTTTGA+AGG | 0.470973 | 8.3:+60386880 | None:intergenic |
| CCAAGTTCTGTCAAAGGCAC+GGG | 0.472286 | 8.3:-60387404 | MS.gene37517:CDS |
| AATAAATCGTGGCATGTCCT+TGG | 0.472321 | 8.3:-60386109 | MS.gene37517:CDS |
| AAAGAGTATTATTTCAAAGC+AGG | 0.473099 | 8.3:-60386703 | MS.gene37517:CDS |
| AGAATGAAGACAGGGTGCTT+TGG | 0.476034 | 8.3:-60386189 | MS.gene37517:CDS |
| ACGTCAAGAAATAAAGGCTA+TGG | 0.478191 | 8.3:-60387428 | MS.gene37517:CDS |
| CACATTTGTCCAAACCTCAT+AGG | 0.484796 | 8.3:+60388913 | None:intergenic |
| TGCTGCTGAGTTGGTAAAGA+TGG | 0.489018 | 8.3:-60387821 | MS.gene37517:CDS |
| TGATCCAAATGCTTGTGGTT+GGG | 0.490330 | 8.3:-60386398 | MS.gene37517:CDS |
| TGTTGCAAGAGCTGCAGTCT+AGG | 0.490652 | 8.3:-60387597 | MS.gene37517:CDS |
| CTGATTCAGATCTTCATCAC+AGG | 0.491823 | 8.3:-60387537 | MS.gene37517:intron |
| TATTGGAAGCACTAGAAGAA+AGG | 0.491924 | 8.3:+60386668 | None:intergenic |
| GCACTAGAAGAAAGGGTGGT+TGG | 0.493295 | 8.3:+60386676 | None:intergenic |
| TAGTGCATAATGATAAAGAC+TGG | 0.499652 | 8.3:+60387156 | None:intergenic |
| TCTGCGTCATGGAGAGTTGT+TGG | 0.501808 | 8.3:-60388956 | MS.gene37517:CDS |
| CCCTTCGGACTTGTCGTGTA+GGG | 0.504060 | 8.3:+60388619 | None:intergenic |
| TATGACAGCAAGTTGGTCAC+TGG | 0.506011 | 8.3:-60387373 | MS.gene37517:CDS |
| ATTGGAAGCACTAGAAGAAA+GGG | 0.507070 | 8.3:+60386669 | None:intergenic |
| ATACCCTAGCCATAATGATC+TGG | 0.507931 | 8.3:+60387656 | None:intergenic |
| TTCTCCAAGTTCTCACTCCT+AGG | 0.508939 | 8.3:+60387181 | None:intergenic |
| TTATGGGAAGTTGATCTTCA+GGG | 0.517146 | 8.3:-60386514 | MS.gene37517:CDS |
| TTCTTCTGTTCGGTTTATGA+GGG | 0.518856 | 8.3:-60387680 | MS.gene37517:CDS |
| TGATGACATCGTTGTTCAGA+AGG | 0.518905 | 8.3:-60386548 | MS.gene37517:CDS |
| CTCTATCAATGATCGATCTA+CGG | 0.519040 | 8.3:+60386069 | None:intergenic |
| GTTGTTCAGAAGGATTTGAC+AGG | 0.522397 | 8.3:-60386538 | MS.gene37517:CDS |
| ATCAATGATCGATCTACGGT+TGG | 0.522553 | 8.3:+60386073 | None:intergenic |
| TCACTGGCATATATCACAAA+TGG | 0.525538 | 8.3:-60386327 | MS.gene37517:CDS |
| GCAATGAATTCCACTTGGTA+TGG | 0.527610 | 8.3:+60387261 | None:intergenic |
| GGAAAAGCGTGCTGCTGAGT+TGG | 0.528593 | 8.3:-60387830 | MS.gene37517:CDS |
| CCATAGAATGTCATTAGTCC+TGG | 0.529892 | 8.3:+60386148 | None:intergenic |
| TTGATCCAAATGCTTGTGGT+TGG | 0.535817 | 8.3:-60386399 | MS.gene37517:CDS |
| CATGAACGTATTTGATCTCA+AGG | 0.549062 | 8.3:-60386368 | MS.gene37517:CDS |
| TAGAAGAAAGGGTGGTTGGA+TGG | 0.549689 | 8.3:+60386680 | None:intergenic |
| GCCAAGTTCTGTCAAAGGCA+CGG | 0.552166 | 8.3:-60387405 | MS.gene37517:CDS |
| TCTGTTGAGTCAGCCGTACT+GGG | 0.556493 | 8.3:-60387748 | MS.gene37517:CDS |
| CTGCCGCAATACAGGGCAGT+AGG | 0.560064 | 8.3:+60386744 | None:intergenic |
| CATCCTACTGCCCTGTATTG+CGG | 0.562221 | 8.3:-60386747 | MS.gene37517:CDS |
| AACTTTGATCCAAATGCTTG+TGG | 0.562703 | 8.3:-60386403 | MS.gene37517:CDS |
| ACCCTTCGGACTTGTCGTGT+AGG | 0.562800 | 8.3:+60388618 | None:intergenic |
| GGACCAGATCATTATGGCTA+GGG | 0.565156 | 8.3:-60387659 | MS.gene37517:CDS |
| CAGGACTAATGACATTCTAT+GGG | 0.566407 | 8.3:-60386147 | MS.gene37517:CDS |
| GGGACCAGATCATTATGGCT+AGG | 0.569661 | 8.3:-60387660 | MS.gene37517:CDS |
| CAAGTTCTGTCAAAGGCACG+GGG | 0.571586 | 8.3:-60387403 | MS.gene37517:CDS |
| CTGGAAGATAGAATCTAAGA+TGG | 0.575970 | 8.3:+60386608 | None:intergenic |
| TGGGTAAATACAGCATTTGG+AGG | 0.579641 | 8.3:-60387729 | MS.gene37517:CDS |
| AATGCTGTATTTACCCAGTA+CGG | 0.587071 | 8.3:+60387735 | None:intergenic |
| CGTCAAGAAATAAAGGCTAT+GGG | 0.590218 | 8.3:-60387427 | MS.gene37517:CDS |
| AAGCACATTCCTCAGTCAGT+TGG | 0.593627 | 8.3:-60387293 | MS.gene37517:CDS |
| TATGGGAAGTTGATCTTCAG+GGG | 0.594151 | 8.3:-60386513 | MS.gene37517:CDS |
| CTCAGCTGTTACAAATGCAA+AGG | 0.595673 | 8.3:-60387095 | MS.gene37517:intron |
| ATTCAAGCTGCCGCAATACA+GGG | 0.605492 | 8.3:+60386737 | None:intergenic |
| CGATTGCCATGACAAAGTAT+CGG | 0.606224 | 8.3:-60386000 | MS.gene37517:CDS |
| TCTCCAAGTTCTCACTCCTA+GGG | 0.606744 | 8.3:+60387182 | None:intergenic |
| GCCCTACACGACAAGTCCGA+AGG | 0.608010 | 8.3:-60388620 | MS.gene37517:CDS |
| AATTGAGTTTATCAGTAACA+AGG | 0.613631 | 8.3:+60386860 | None:intergenic |
| AAGCTGGGGACATTACCTCC+AGG | 0.613770 | 8.3:-60386166 | MS.gene37517:CDS |
| GTCATGGCAATCGCTAGCCA+CGG | 0.617762 | 8.3:+60386010 | None:intergenic |
| TATGGGCCAAGTTCTGTCAA+AGG | 0.623145 | 8.3:-60387410 | MS.gene37517:CDS |
| ACAGGGTGCTTTGGAAGCTG+GGG | 0.627413 | 8.3:-60386180 | MS.gene37517:CDS |
| GCAATTGTATGACAGCAAGT+TGG | 0.629238 | 8.3:-60387380 | MS.gene37517:CDS |
| TCTTGGCAGCCAACTGACTG+AGG | 0.635206 | 8.3:+60387284 | None:intergenic |
| CCCTACACGACAAGTCCGAA+GGG | 0.638020 | 8.3:-60388619 | MS.gene37517:intron |
| CACATCCACTAAATAAATCG+TGG | 0.639212 | 8.3:-60386120 | MS.gene37517:CDS |
| ACGTATTTGATCTCAAGGAG+TGG | 0.640381 | 8.3:-60386363 | MS.gene37517:CDS |
| GATAAGCAATGAATTCCACT+TGG | 0.641239 | 8.3:+60387256 | None:intergenic |
| AGTGCATAATGATAAAGACT+GGG | 0.649951 | 8.3:+60387157 | None:intergenic |
| TGAGTTTATCAGTAACAAGG+TGG | 0.652327 | 8.3:+60386863 | None:intergenic |
| GCAGCAGTTGTACACTACAA+TGG | 0.656287 | 8.3:-60386043 | MS.gene37517:CDS |
| GTAAGGCCGATACTTTGTCA+TGG | 0.657953 | 8.3:+60385994 | None:intergenic |
| TAGAATGTCATTAGTCCTGG+AGG | 0.659704 | 8.3:+60386151 | None:intergenic |
| GGAGGTAGTAATCTATTGTG+AGG | 0.664103 | 8.3:+60387227 | None:intergenic |
| GGAAGCACTAGAAGAAAGGG+TGG | 0.674642 | 8.3:+60386672 | None:intergenic |
| AACAGCTGAGTTCACAACAA+CGG | 0.690951 | 8.3:+60387108 | None:intergenic |
| TTGGACTATAACCTAAACCA+AGG | 0.700433 | 8.3:+60386092 | None:intergenic |
| ACAATGGTAATATGAAGCCG+TGG | 0.711006 | 8.3:-60386027 | MS.gene37517:CDS |
| GCTGCCAAGACCATACCAAG+TGG | 0.721158 | 8.3:-60387271 | MS.gene37517:CDS |
| AATGGTGCAGTTGAAACATG+TGG | 0.724609 | 8.3:-60386484 | MS.gene37517:CDS |
| AAGTTCTGTCAAAGGCACGG+GGG | 0.753594 | 8.3:-60387402 | MS.gene37517:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTGATTTTTTAATTAA+AGG | - | chr8.3:60386085-60386104 | MS.gene37517:CDS | 10.0% |
| !!! | TTTATACTTATTTTAAATAC+AGG | + | chr8.3:60386028-60386047 | None:intergenic | 10.0% |
| !!! | ATATTTTCTCAAATCATATA+TGG | + | chr8.3:60387936-60387955 | None:intergenic | 15.0% |
| !! | AAATATTTCAGAAAGTAAAC+AGG | - | chr8.3:60386689-60386708 | MS.gene37517:CDS | 20.0% |
| !! | AAATCAGATTAAAAAAAGCT+AGG | + | chr8.3:60388683-60388702 | None:intergenic | 20.0% |
| !! | AATTATTCACTGTCTATAAA+AGG | + | chr8.3:60387872-60387891 | None:intergenic | 20.0% |
| !! | AGTTAAGATATTTGTCAAAT+CGG | + | chr8.3:60388447-60388466 | None:intergenic | 20.0% |
| !! | ATCAAACATGAATTAACATT+TGG | + | chr8.3:60386074-60386093 | None:intergenic | 20.0% |
| !!! | AAAAGGATTTTATCTAATCT+AGG | + | chr8.3:60388319-60388338 | None:intergenic | 20.0% |
| !!! | AAAATGTAGATGATTTTAAG+TGG | - | chr8.3:60388116-60388135 | MS.gene37517:intron | 20.0% |
| !!! | TTTATTTTTGACAACAACAA+AGG | - | chr8.3:60386401-60386420 | MS.gene37517:CDS | 20.0% |
| !!! | TTTTATAAGATTTAAGGAGA+CGG | + | chr8.3:60386658-60386677 | None:intergenic | 20.0% |
| ! | AAAATGTAAACATGAAACAC+AGG | + | chr8.3:60386439-60386458 | None:intergenic | 25.0% |
| ! | AAACATGAATTAACATTTGG+AGG | + | chr8.3:60386071-60386090 | None:intergenic | 25.0% |
| ! | AATTGAGTTTATCAGTAACA+AGG | + | chr8.3:60388036-60388055 | None:intergenic | 25.0% |
| ! | AATTGTAAAATCAAACAGTG+AGG | + | chr8.3:60386504-60386523 | None:intergenic | 25.0% |
| ! | ATAAAAGGAAATAATGCACA+CGG | + | chr8.3:60387857-60387876 | None:intergenic | 25.0% |
| ! | ATATCACAAATGGCAAAATA+TGG | - | chr8.3:60388576-60388595 | MS.gene37517:intron | 25.0% |
| ! | CTATACTGTATAATATGCAT+GGG | - | chr8.3:60386195-60386214 | MS.gene37517:intron | 25.0% |
| ! | TAAGCAGAAAATTCAGAAAA+AGG | + | chr8.3:60387417-60387436 | None:intergenic | 25.0% |
| ! | TCTATACTGTATAATATGCA+TGG | - | chr8.3:60386194-60386213 | MS.gene37517:intron | 25.0% |
| ! | TGCAGCAATTAATAGAAAAA+AGG | - | chr8.3:60387038-60387057 | MS.gene37517:intron | 25.0% |
| ! | TGGGTTTCTATATTTCATAT+TGG | + | chr8.3:60388245-60388264 | None:intergenic | 25.0% |
| ! | TTAACATATTTAGTCCAGTA+AGG | + | chr8.3:60388919-60388938 | None:intergenic | 25.0% |
| !! | AATCATCTACATTTTGAACA+TGG | + | chr8.3:60388111-60388130 | None:intergenic | 25.0% |
| !! | ACTATTTTCAGATAATGTCT+TGG | - | chr8.3:60387756-60387775 | MS.gene37517:CDS | 25.0% |
| !! | ACTTTGAGTGTTTTTCATTT+TGG | - | chr8.3:60386980-60386999 | MS.gene37517:intron | 25.0% |
| !! | CTTTGAGTGTTTTTCATTTT+GGG | - | chr8.3:60386981-60387000 | MS.gene37517:intron | 25.0% |
| !! | GAGAATATTTTCAATCATGT+TGG | + | chr8.3:60386861-60386880 | None:intergenic | 25.0% |
| !! | GTTACTGATAAACTCAATTT+TGG | - | chr8.3:60388037-60388056 | MS.gene37517:intron | 25.0% |
| !!! | AAAGAGTATTATTTCAAAGC+AGG | - | chr8.3:60388190-60388209 | MS.gene37517:intron | 25.0% |
| !!! | ACATTTTTTATGAGAGAAGA+CGG | + | chr8.3:60386619-60386638 | None:intergenic | 25.0% |
| !!! | TAGAGCATTTTATTCTCTTT+TGG | - | chr8.3:60386808-60386827 | MS.gene37517:CDS | 25.0% |
| AAAAGCAATATCATTTGACG+TGG | + | chr8.3:60386726-60386745 | None:intergenic | 30.0% | |
| AACAACAAAGGAAAAGGTAA+GGG | - | chr8.3:60386413-60386432 | MS.gene37517:CDS | 30.0% | |
| AACATAAAGACAATGAGAGT+TGG | + | chr8.3:60387971-60387990 | None:intergenic | 30.0% | |
| AACTATCACTAACATAAGGA+AGG | + | chr8.3:60386358-60386377 | None:intergenic | 30.0% | |
| AGTGCATAATGATAAAGACT+GGG | + | chr8.3:60387739-60387758 | None:intergenic | 30.0% | |
| ATATTCAAATCCTACAGTCA+AGG | + | chr8.3:60387899-60387918 | None:intergenic | 30.0% | |
| GCAATTAATAGAAAAAAGGC+AGG | - | chr8.3:60387042-60387061 | MS.gene37517:intron | 30.0% | |
| TAGTACACGTCAAGAAATAA+AGG | - | chr8.3:60387459-60387478 | MS.gene37517:intron | 30.0% | |
| TAGTGCATAATGATAAAGAC+TGG | + | chr8.3:60387740-60387759 | None:intergenic | 30.0% | |
| TCAAAGTTTCTTGCAATATG+TGG | + | chr8.3:60388478-60388497 | None:intergenic | 30.0% | |
| TGCAAACTATCACTAACATA+AGG | + | chr8.3:60386362-60386381 | None:intergenic | 30.0% | |
| TGTTACACAAGAAAAACCAA+AGG | - | chr8.3:60386127-60386146 | MS.gene37517:CDS | 30.0% | |
| TTCTCATTCTTACTGAATTG+TGG | - | chr8.3:60386876-60386895 | MS.gene37517:CDS | 30.0% | |
| TTCTTGTTAGAACTTGCATT+TGG | - | chr8.3:60386318-60386337 | MS.gene37517:CDS | 30.0% | |
| TTTGACAACAACAAAGGAAA+AGG | - | chr8.3:60386407-60386426 | MS.gene37517:CDS | 30.0% | |
| ! | GTTGGAGAATATTACGTTTT+AGG | + | chr8.3:60386843-60386862 | None:intergenic | 30.0% |
| ! | TCTAATCTAGGATAAACTTC+TGG | + | chr8.3:60388307-60388326 | None:intergenic | 30.0% |
| ! | TGCTAAAACAGTGTTTTCAT+TGG | - | chr8.3:60386562-60386581 | MS.gene37517:CDS | 30.0% |
| !! | AAAATGCTGATTCTTCTGTT+CGG | - | chr8.3:60387203-60387222 | MS.gene37517:CDS | 30.0% |
| !! | AGTGTTTTTCATTTTGGGAA+TGG | - | chr8.3:60386986-60387005 | MS.gene37517:intron | 30.0% |
| !! | ATAATTTGTTCCTTGACTGT+AGG | - | chr8.3:60387886-60387905 | MS.gene37517:intron | 30.0% |
| !! | GTGTTTTTCATTTTGGGAAT+GGG | - | chr8.3:60386987-60387006 | MS.gene37517:intron | 30.0% |
| !!! | CTGATTTTAGAATGAAGACA+GGG | - | chr8.3:60388696-60388715 | MS.gene37517:intron | 30.0% |
| !!! | TCTGATTTTAGAATGAAGAC+AGG | - | chr8.3:60388695-60388714 | MS.gene37517:intron | 30.0% |
| !!! | TTACACTTTTTTTGTGCAGA+GGG | - | chr8.3:60386230-60386249 | MS.gene37517:intron | 30.0% |
| !!! | TTTACACTTTTTTTGTGCAG+AGG | - | chr8.3:60386229-60386248 | MS.gene37517:intron | 30.0% |
| AAAGAGAGTCAACATGCTTT+AGG | - | chr8.3:60387322-60387341 | MS.gene37517:CDS | 35.0% | |
| AAATAATGCACACGGAACAT+CGG | + | chr8.3:60387849-60387868 | None:intergenic | 35.0% | |
| AACTTTGATCCAAATGCTTG+TGG | - | chr8.3:60388490-60388509 | MS.gene37517:intron | 35.0% | |
| AATGCTGTATTTACCCAGTA+CGG | + | chr8.3:60387161-60387180 | None:intergenic | 35.0% | |
| ACAAGAAAAACCAAAGGTGA+AGG | - | chr8.3:60386133-60386152 | MS.gene37517:CDS | 35.0% | |
| ACATGCCACGATTTATTTAG+TGG | + | chr8.3:60388781-60388800 | None:intergenic | 35.0% | |
| ACGTCAAGAAATAAAGGCTA+TGG | - | chr8.3:60387465-60387484 | MS.gene37517:intron | 35.0% | |
| AGAAGGATTTGACAGGATTA+TGG | - | chr8.3:60388362-60388381 | MS.gene37517:intron | 35.0% | |
| ATTCTTCTGTTCGGTTTATG+AGG | - | chr8.3:60387212-60387231 | MS.gene37517:CDS | 35.0% | |
| CAAAAGAAACCACATGTTCA+TGG | + | chr8.3:60388065-60388084 | None:intergenic | 35.0% | |
| CAAAGTCGAAACACAATGTT+TGG | + | chr8.3:60386966-60386985 | None:intergenic | 35.0% | |
| CAACAACAAAGGAAAAGGTA+AGG | - | chr8.3:60386412-60386431 | MS.gene37517:CDS | 35.0% | |
| CACATCCACTAAATAAATCG+TGG | - | chr8.3:60388773-60388792 | MS.gene37517:CDS | 35.0% | |
| CAGGACTAATGACATTCTAT+GGG | - | chr8.3:60388746-60388765 | MS.gene37517:CDS | 35.0% | |
| CATGAACGTATTTGATCTCA+AGG | - | chr8.3:60388525-60388544 | MS.gene37517:intron | 35.0% | |
| CGATGTCATCATCAAGAAAA+AGG | + | chr8.3:60388336-60388355 | None:intergenic | 35.0% | |
| CGTCAAGAAATAAAGGCTAT+GGG | - | chr8.3:60387466-60387485 | MS.gene37517:intron | 35.0% | |
| CTCTATCAATGATCGATCTA+CGG | + | chr8.3:60388827-60388846 | None:intergenic | 35.0% | |
| CTGGAAGATAGAATCTAAGA+TGG | + | chr8.3:60388288-60388307 | None:intergenic | 35.0% | |
| GAAGGATTTGACAGGATTAT+GGG | - | chr8.3:60388363-60388382 | MS.gene37517:intron | 35.0% | |
| GATAAGCAATGAATTCCACT+TGG | + | chr8.3:60387640-60387659 | None:intergenic | 35.0% | |
| TACTGGGTAAATACAGCATT+TGG | - | chr8.3:60387161-60387180 | MS.gene37517:CDS | 35.0% | |
| TCACTGGCATATATCACAAA+TGG | - | chr8.3:60388566-60388585 | MS.gene37517:intron | 35.0% | |
| TCTTGTGTAACATGTGTTGT+TGG | + | chr8.3:60386119-60386138 | None:intergenic | 35.0% | |
| TGAGTTTATCAGTAACAAGG+TGG | + | chr8.3:60388033-60388052 | None:intergenic | 35.0% | |
| TGGAAAAAGAAGGATATCAC+TGG | - | chr8.3:60388550-60388569 | MS.gene37517:intron | 35.0% | |
| TGGAGGCAATAAGACAATAA+TGG | + | chr8.3:60386054-60386073 | None:intergenic | 35.0% | |
| TTCTTCTGTTCGGTTTATGA+GGG | - | chr8.3:60387213-60387232 | MS.gene37517:CDS | 35.0% | |
| TTGGACTATAACCTAAACCA+AGG | + | chr8.3:60388804-60388823 | None:intergenic | 35.0% | |
| ! | ATTATGGGAAGTTGATCTTC+AGG | - | chr8.3:60388378-60388397 | MS.gene37517:intron | 35.0% |
| ! | GAACTTGCATTTGGCTTATT+TGG | - | chr8.3:60386327-60386346 | MS.gene37517:CDS | 35.0% |
| ! | TAACTTGCATTTCTGCAGAT+AGG | + | chr8.3:60388953-60388972 | None:intergenic | 35.0% |
| ! | TTATGGGAAGTTGATCTTCA+GGG | - | chr8.3:60388379-60388398 | MS.gene37517:intron | 35.0% |
| !! | ATTGGAAGCACTAGAAGAAA+GGG | + | chr8.3:60388227-60388246 | None:intergenic | 35.0% |
| !! | TATTGGAAGCACTAGAAGAA+AGG | + | chr8.3:60388228-60388247 | None:intergenic | 35.0% |
| !!! | TGAGCATCGAGAGATATTTT+GGG | + | chr8.3:60388264-60388283 | None:intergenic | 35.0% |
| !!! | TTGAGCATCGAGAGATATTT+TGG | + | chr8.3:60388265-60388284 | None:intergenic | 35.0% |
| AACAGCTGAGTTCACAACAA+CGG | + | chr8.3:60387788-60387807 | None:intergenic | 40.0% | |
| AATAAATCGTGGCATGTCCT+TGG | - | chr8.3:60388784-60388803 | MS.gene37517:CDS | 40.0% | |
| AATGGTGCAGTTGAAACATG+TGG | - | chr8.3:60388409-60388428 | MS.gene37517:intron | 40.0% | |
| AATTCCACTTGGTATGGTCT+TGG | + | chr8.3:60387629-60387648 | None:intergenic | 40.0% | |
| ACAAAATGATGCTCACCCTT+CGG | + | chr8.3:60386292-60386311 | None:intergenic | 40.0% | |
| ACAATGGTAATATGAAGCCG+TGG | - | chr8.3:60388866-60388885 | MS.gene37517:intron | 40.0% | |
| ACGTATTTGATCTCAAGGAG+TGG | - | chr8.3:60388530-60388549 | MS.gene37517:intron | 40.0% | |
| AGAACATCGTTGTGAATGCT+TGG | + | chr8.3:60386936-60386955 | None:intergenic | 40.0% | |
| AGACAGCTGATGAGAAAGTT+AGG | - | chr8.3:60387563-60387582 | MS.gene37517:CDS | 40.0% | |
| AGGTGGAAAACATGCTTTGA+AGG | + | chr8.3:60388016-60388035 | None:intergenic | 40.0% | |
| ATACCCTAGCCATAATGATC+TGG | + | chr8.3:60387240-60387259 | None:intergenic | 40.0% | |
| ATCAATGATCGATCTACGGT+TGG | + | chr8.3:60388823-60388842 | None:intergenic | 40.0% | |
| CACATTTGTCCAAACCTCAT+AGG | + | chr8.3:60385983-60386002 | None:intergenic | 40.0% | |
| CCAGGACTAATGACATTCTA+TGG | - | chr8.3:60388745-60388764 | MS.gene37517:CDS | 40.0% | |
| CCATAGAATGTCATTAGTCC+TGG | + | chr8.3:60388748-60388767 | None:intergenic | 40.0% | |
| CGATTGCCATGACAAAGTAT+CGG | - | chr8.3:60388893-60388912 | MS.gene37517:intron | 40.0% | |
| CTCAGCTGTTACAAATGCAA+AGG | - | chr8.3:60387798-60387817 | MS.gene37517:CDS | 40.0% | |
| CTGAAAAAAGGAAGTTCCCT+AGG | - | chr8.3:60387695-60387714 | MS.gene37517:CDS | 40.0% | |
| CTGATTCAGATCTTCATCAC+AGG | - | chr8.3:60387356-60387375 | MS.gene37517:CDS | 40.0% | |
| CTTCATCACAGGTTCGAATT+AGG | - | chr8.3:60387367-60387386 | MS.gene37517:CDS | 40.0% | |
| GAAAAACCAAAGGTGAAGGA+AGG | - | chr8.3:60386137-60386156 | MS.gene37517:CDS | 40.0% | |
| GATCTTCAGGGGAAAGTAAA+TGG | - | chr8.3:60388391-60388410 | MS.gene37517:intron | 40.0% | |
| GCAATGAATTCCACTTGGTA+TGG | + | chr8.3:60387635-60387654 | None:intergenic | 40.0% | |
| GCAATTGTATGACAGCAAGT+TGG | - | chr8.3:60387513-60387532 | MS.gene37517:intron | 40.0% | |
| GGAGGTAGTAATCTATTGTG+AGG | + | chr8.3:60387669-60387688 | None:intergenic | 40.0% | |
| GTTCTTGTGTTCAATGTTGC+AGG | - | chr8.3:60387988-60388007 | MS.gene37517:intron | 40.0% | |
| GTTGTTCAGAAGGATTTGAC+AGG | - | chr8.3:60388355-60388374 | MS.gene37517:intron | 40.0% | |
| TAGAATGTCATTAGTCCTGG+AGG | + | chr8.3:60388745-60388764 | None:intergenic | 40.0% | |
| TATGAGGGACCAGATCATTA+TGG | - | chr8.3:60387228-60387247 | MS.gene37517:CDS | 40.0% | |
| TCTCAAGGAGTGGAAAAAGA+AGG | - | chr8.3:60388540-60388559 | MS.gene37517:intron | 40.0% | |
| TGATCCAAATGCTTGTGGTT+GGG | - | chr8.3:60388495-60388514 | MS.gene37517:intron | 40.0% | |
| TGATGACATCGTTGTTCAGA+AGG | - | chr8.3:60388345-60388364 | MS.gene37517:intron | 40.0% | |
| TGGGTAAATACAGCATTTGG+AGG | - | chr8.3:60387164-60387183 | MS.gene37517:CDS | 40.0% | |
| TTGATCCAAATGCTTGTGGT+TGG | - | chr8.3:60388494-60388513 | MS.gene37517:intron | 40.0% | |
| ! | TATGGGAAGTTGATCTTCAG+GGG | - | chr8.3:60388380-60388399 | MS.gene37517:intron | 40.0% |
| !! | ACATGGATTGTAGCTTTTCC+AGG | + | chr8.3:60388094-60388113 | None:intergenic | 40.0% |
| !!! | ACTTCCTTTTTTCAGGAGGA+AGG | + | chr8.3:60387690-60387709 | None:intergenic | 40.0% |
| !!! | ATTTTGGAGCCATGAACATG+TGG | - | chr8.3:60388053-60388072 | MS.gene37517:intron | 40.0% |
| !!! | CTAGGGAACTTCCTTTTTTC+AGG | + | chr8.3:60387697-60387716 | None:intergenic | 40.0% |
| AAGACGGAAGACTATCTTGG+AGG | + | chr8.3:60386603-60386622 | None:intergenic | 45.0% | |
| AAGCACATTCCTCAGTCAGT+TGG | - | chr8.3:60387600-60387619 | MS.gene37517:CDS | 45.0% | |
| AAGGAAGGAAGATCTTCAGG+TGG | - | chr8.3:60386152-60386171 | MS.gene37517:CDS | 45.0% | |
| AATGCTTGTGGTTGGGCATA+TGG | - | chr8.3:60388502-60388521 | MS.gene37517:intron | 45.0% | |
| ACCTCCTTCCTCCTGAAAAA+AGG | - | chr8.3:60387683-60387702 | MS.gene37517:CDS | 45.0% | |
| ATTCAAGCTGCCGCAATACA+GGG | + | chr8.3:60388159-60388178 | None:intergenic | 45.0% | |
| CAAATGCTGCCTATGAGGTT+TGG | - | chr8.3:60385971-60385990 | MS.gene37517:CDS | 45.0% | |
| CGTTGTGAATGCTTGGCAAT+TGG | + | chr8.3:60386929-60386948 | None:intergenic | 45.0% | |
| GACTTCAAATGCTGCCTATG+AGG | - | chr8.3:60385966-60385985 | MS.gene37517:CDS | 45.0% | |
| GAGAAGACGGAAGACTATCT+TGG | + | chr8.3:60386606-60386625 | None:intergenic | 45.0% | |
| GATCTTCCTTCCTTCACCTT+TGG | + | chr8.3:60386146-60386165 | None:intergenic | 45.0% | |
| GCAGCAGTTGTACACTACAA+TGG | - | chr8.3:60388850-60388869 | MS.gene37517:intron | 45.0% | |
| GGACCAGATCATTATGGCTA+GGG | - | chr8.3:60387234-60387253 | MS.gene37517:CDS | 45.0% | |
| GTAAGGCCGATACTTTGTCA+TGG | + | chr8.3:60388902-60388921 | None:intergenic | 45.0% | |
| GTGAAGGAAGGAAGATCTTC+AGG | - | chr8.3:60386149-60386168 | MS.gene37517:CDS | 45.0% | |
| TAGAAGAAAGGGTGGTTGGA+TGG | + | chr8.3:60388216-60388235 | None:intergenic | 45.0% | |
| TATGCCCAACCACAAGCATT+TGG | + | chr8.3:60388502-60388521 | None:intergenic | 45.0% | |
| TATGGGCCAAGTTCTGTCAA+AGG | - | chr8.3:60387483-60387502 | MS.gene37517:intron | 45.0% | |
| TCTCCAAGTTCTCACTCCTA+GGG | + | chr8.3:60387714-60387733 | None:intergenic | 45.0% | |
| TGGACAAATGTGCTTCTGCA+TGG | - | chr8.3:60385991-60386010 | MS.gene37517:CDS | 45.0% | |
| TTCTCCAAGTTCTCACTCCT+AGG | + | chr8.3:60387715-60387734 | None:intergenic | 45.0% | |
| ! | AGAATGAAGACAGGGTGCTT+TGG | - | chr8.3:60388704-60388723 | MS.gene37517:intron | 45.0% |
| ! | GGATTGTAGCTTTTCCAGGA+GGG | + | chr8.3:60388090-60388109 | None:intergenic | 45.0% |
| ! | TGGATTGTAGCTTTTCCAGG+AGG | + | chr8.3:60388091-60388110 | None:intergenic | 45.0% |
| ! | TGGTTTCTTTTGAACCCTCC+TGG | - | chr8.3:60388073-60388092 | MS.gene37517:intron | 45.0% |
| !! | TATGACAGCAAGTTGGTCAC+TGG | - | chr8.3:60387520-60387539 | MS.gene37517:intron | 45.0% |
| !! | TGACAAAGTATCGGCCTTAC+TGG | - | chr8.3:60388902-60388921 | MS.gene37517:intron | 45.0% |
| !! | TGCTGCTGAGTTGGTAAAGA+TGG | - | chr8.3:60387072-60387091 | MS.gene37517:intron | 45.0% |
| !!! | GGGAACTTCCTTTTTTCAGG+AGG | + | chr8.3:60387694-60387713 | None:intergenic | 45.0% |
| !!! | TCCTTTTTTCAGGAGGAAGG+AGG | + | chr8.3:60387687-60387706 | None:intergenic | 45.0% |
| !!! | TTTAAATTTTATAAGATTTA+AGG | + | chr8.3:60386664-60386683 | None:intergenic | 5.0% |
| ATCTGTTGAGTCAGCCGTAC+TGG | - | chr8.3:60387144-60387163 | MS.gene37517:CDS | 50.0% | |
| CATCCTACTGCCCTGTATTG+CGG | - | chr8.3:60388146-60388165 | MS.gene37517:intron | 50.0% | |
| GATTCAAGCTGCCGCAATAC+AGG | + | chr8.3:60388160-60388179 | None:intergenic | 50.0% | |
| GCACTAGAAGAAAGGGTGGT+TGG | + | chr8.3:60388220-60388239 | None:intergenic | 50.0% | |
| GCCAAGTTCTGTCAAAGGCA+CGG | - | chr8.3:60387488-60387507 | MS.gene37517:intron | 50.0% | |
| GGGACCAGATCATTATGGCT+AGG | - | chr8.3:60387233-60387252 | MS.gene37517:CDS | 50.0% | |
| GTTCCCTAGGAGTGAGAACT+TGG | - | chr8.3:60387708-60387727 | MS.gene37517:CDS | 50.0% | |
| TCGTGGCATGTCCTTGGTTT+AGG | - | chr8.3:60388790-60388809 | MS.gene37517:intron | 50.0% | |
| TCTGCGTCATGGAGAGTTGT+TGG | - | chr8.3:60385937-60385956 | MS.gene37517:CDS | 50.0% | |
| TCTGTTGAGTCAGCCGTACT+GGG | - | chr8.3:60387145-60387164 | MS.gene37517:CDS | 50.0% | |
| TGTTGCAAGAGCTGCAGTCT+AGG | - | chr8.3:60387296-60387315 | MS.gene37517:CDS | 50.0% | |
| ! | AAGTTCTGTCAAAGGCACGG+GGG | - | chr8.3:60387491-60387510 | MS.gene37517:intron | 50.0% |
| ! | CAAGTTCTGTCAAAGGCACG+GGG | - | chr8.3:60387490-60387509 | MS.gene37517:intron | 50.0% |
| ! | CCAAGTTCTGTCAAAGGCAC+GGG | - | chr8.3:60387489-60387508 | MS.gene37517:intron | 50.0% |
| !! | GGAAGCACTAGAAGAAAGGG+TGG | + | chr8.3:60388224-60388243 | None:intergenic | 50.0% |
| AAGCTGGGGACATTACCTCC+AGG | - | chr8.3:60388727-60388746 | MS.gene37517:intron | 55.0% | |
| ACCCTTCGGACTTGTCGTGT+AGG | + | chr8.3:60386278-60386297 | None:intergenic | 55.0% | |
| CCCGTGCCTTTGACAGAACT+TGG | + | chr8.3:60387492-60387511 | None:intergenic | 55.0% | |
| CCCTACACGACAAGTCCGAA+GGG | - | chr8.3:60386274-60386293 | MS.gene37517:intron | 55.0% | |
| CCCTTCGGACTTGTCGTGTA+GGG | + | chr8.3:60386277-60386296 | None:intergenic | 55.0% | |
| GCTGCCAAGACCATACCAAG+TGG | - | chr8.3:60387622-60387641 | MS.gene37517:CDS | 55.0% | |
| GTCATGGCAATCGCTAGCCA+CGG | + | chr8.3:60388886-60388905 | None:intergenic | 55.0% | |
| GTGCAGAGGGTCTTACTCAC+TGG | - | chr8.3:60386243-60386262 | MS.gene37517:intron | 55.0% | |
| TCTTGGCAGCCAACTGACTG+AGG | + | chr8.3:60387612-60387631 | None:intergenic | 55.0% | |
| ! | GGAAAAGCGTGCTGCTGAGT+TGG | - | chr8.3:60387063-60387082 | MS.gene37517:intron | 55.0% |
| !! | ACAGGGTGCTTTGGAAGCTG+GGG | - | chr8.3:60388713-60388732 | MS.gene37517:intron | 55.0% |
| !! | AGACAGGGTGCTTTGGAAGC+TGG | - | chr8.3:60388711-60388730 | MS.gene37517:intron | 55.0% |
| !! | GACAGGGTGCTTTGGAAGCT+GGG | - | chr8.3:60388712-60388731 | MS.gene37517:intron | 55.0% |
| CTGCCGCAATACAGGGCAGT+AGG | + | chr8.3:60388152-60388171 | None:intergenic | 60.0% | |
| GCCCTACACGACAAGTCCGA+AGG | - | chr8.3:60386273-60386292 | MS.gene37517:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 60385934 | 60388981 | 60385934 | ID=MS.gene37517 |
| chr8.3 | mRNA | 60385934 | 60388981 | 60385934 | ID=MS.gene37517.t1;Parent=MS.gene37517 |
| chr8.3 | exon | 60388928 | 60388981 | 60388928 | ID=MS.gene37517.t1.exon1;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60388928 | 60388981 | 60388928 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| chr8.3 | exon | 60388745 | 60388808 | 60388745 | ID=MS.gene37517.t1.exon2;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60388745 | 60388808 | 60388745 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| chr8.3 | exon | 60388620 | 60388666 | 60388620 | ID=MS.gene37517.t1.exon3;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60388620 | 60388666 | 60388620 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| chr8.3 | exon | 60387538 | 60387872 | 60387538 | ID=MS.gene37517.t1.exon4;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60387538 | 60387872 | 60387538 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| chr8.3 | exon | 60387096 | 60387453 | 60387096 | ID=MS.gene37517.t1.exon5;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60387096 | 60387453 | 60387096 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| chr8.3 | exon | 60386318 | 60386905 | 60386318 | ID=MS.gene37517.t1.exon6;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60386318 | 60386905 | 60386318 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| chr8.3 | exon | 60385934 | 60386209 | 60385934 | ID=MS.gene37517.t1.exon7;Parent=MS.gene37517.t1 |
| chr8.3 | CDS | 60385934 | 60386209 | 60385934 | ID=cds.MS.gene37517.t1;Parent=MS.gene37517.t1 |
| Gene Sequence |
| Protein sequence |
