Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08461.t1 | XP_003627464.1 | 96.3 | 241 | 8 | 1 | 1 | 240 | 1 | 241 | 1.10E-126 | 462.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08461.t1 | Q9SHI7 | 73.8 | 240 | 60 | 1 | 1 | 240 | 1 | 237 | 9.5e-95 | 347.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08461.t1 | B7FML7 | 96.3 | 241 | 8 | 1 | 1 | 240 | 1 | 241 | 8.0e-127 | 462.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene08461 | 0.831258 | 1.85E-55 | -1.69E-46 |
| MS.gene04919 | MS.gene08461 | 0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene08461 | 0.825476 | 4.59E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene08461 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene08461 | 0.832416 | 9.57E-56 | -1.69E-46 |
| MS.gene049680 | MS.gene08461 | 0.842643 | 2.28E-58 | -1.69E-46 |
| MS.gene05029 | MS.gene08461 | 0.804238 | 2.38E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene08461 | 0.81171 | 6.11E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene08461 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene08461 | 0.867923 | 9.56E-66 | -1.69E-46 |
| MS.gene051234 | MS.gene08461 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene051676 | MS.gene08461 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene08461 | 0.816398 | 5.65E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene08461 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene08461 | 0.83259 | 8.67E-56 | -1.69E-46 |
| MS.gene052296 | MS.gene08461 | 0.807046 | 6.12E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene08461 | 0.85653 | 3.02E-62 | -1.69E-46 |
| MS.gene052793 | MS.gene08461 | 0.820773 | 5.74E-53 | -1.69E-46 |
| MS.gene053272 | MS.gene08461 | -0.806303 | 8.78E-50 | -1.69E-46 |
| MS.gene053879 | MS.gene08461 | 0.821682 | 3.55E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene08461 | 0.806575 | 7.70E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene08461 | 0.806129 | 9.55E-50 | -1.69E-46 |
| MS.gene05469 | MS.gene08461 | 0.812049 | 5.15E-51 | -1.69E-46 |
| MS.gene055150 | MS.gene08461 | 0.833538 | 5.03E-56 | -1.69E-46 |
| MS.gene055801 | MS.gene08461 | 0.804557 | 2.04E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene08461 | 0.813241 | 2.83E-51 | -1.69E-46 |
| MS.gene056825 | MS.gene08461 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene08461 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene056986 | MS.gene08461 | 0.817774 | 2.77E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene08461 | 0.874432 | 6.78E-68 | -1.69E-46 |
| MS.gene058095 | MS.gene08461 | 0.802086 | 6.63E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene08461 | 0.802314 | 5.95E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene08461 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene08461 | 0.830834 | 2.35E-55 | -1.69E-46 |
| MS.gene05952 | MS.gene08461 | 0.800659 | 1.30E-48 | -1.69E-46 |
| MS.gene05985 | MS.gene08461 | -0.85034 | 1.81E-60 | -1.69E-46 |
| MS.gene060338 | MS.gene08461 | 0.829315 | 5.52E-55 | -1.69E-46 |
| MS.gene060935 | MS.gene08461 | 0.841232 | 5.38E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene08461 | 0.855185 | 7.47E-62 | -1.69E-46 |
| MS.gene061100 | MS.gene08461 | 0.807745 | 4.35E-50 | -1.69E-46 |
| MS.gene061160 | MS.gene08461 | 0.823921 | 1.07E-53 | -1.69E-46 |
| MS.gene061188 | MS.gene08461 | 0.818633 | 1.77E-52 | -1.69E-46 |
| MS.gene061243 | MS.gene08461 | 0.802581 | 5.24E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84986 | MS.gene08461 | PPI |
| MS.gene08461 | MS.gene028078 | PPI |
| MS.gene08461 | MS.gene052128 | PPI |
| MS.gene31164 | MS.gene08461 | PPI |
| MS.gene08461 | MS.gene30950 | PPI |
| MS.gene08461 | MS.gene72831 | PPI |
| MS.gene08461 | MS.gene028080 | PPI |
| MS.gene08461 | MS.gene070084 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08461.t1 | MTR_8g023380 | 97.095 | 241 | 6 | 1 | 1 | 240 | 1 | 241 | 6.38e-178 | 488 |
| MS.gene08461.t1 | MTR_4g121960 | 34.637 | 179 | 112 | 3 | 6 | 182 | 11 | 186 | 1.50e-33 | 123 |
| MS.gene08461.t1 | MTR_8g071040 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 5.42e-17 | 75.5 |
| MS.gene08461.t1 | MTR_1g021150 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 6.77e-16 | 72.8 |
| MS.gene08461.t1 | MTR_3g062450 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 1.00e-15 | 72.4 |
| MS.gene08461.t1 | MTR_5g075580 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 1.08e-15 | 72.0 |
| MS.gene08461.t1 | MTR_8g468530 | 31.092 | 119 | 73 | 3 | 8 | 122 | 23 | 136 | 1.12e-15 | 72.8 |
| MS.gene08461.t1 | MTR_4g108080 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.86e-15 | 71.6 |
| MS.gene08461.t1 | MTR_7g116940 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.03e-15 | 71.2 |
| MS.gene08461.t1 | MTR_4g073240 | 31.624 | 117 | 71 | 3 | 8 | 120 | 4 | 115 | 2.49e-15 | 71.2 |
| MS.gene08461.t1 | MTR_7g116940 | 33.333 | 111 | 65 | 3 | 8 | 114 | 4 | 109 | 1.44e-13 | 65.9 |
| MS.gene08461.t1 | MTR_4g108080 | 31.481 | 108 | 65 | 3 | 8 | 111 | 7 | 109 | 4.35e-13 | 64.3 |
| MS.gene08461.t1 | MTR_7g116940 | 30.973 | 113 | 69 | 3 | 8 | 116 | 4 | 111 | 4.90e-13 | 65.1 |
| MS.gene08461.t1 | MTR_8g085690 | 28.571 | 126 | 73 | 3 | 8 | 125 | 25 | 141 | 1.01e-12 | 64.7 |
| MS.gene08461.t1 | MTR_3g110110 | 29.600 | 125 | 78 | 4 | 4 | 122 | 2 | 122 | 9.82e-12 | 61.6 |
| MS.gene08461.t1 | MTR_1g021150 | 33.673 | 98 | 56 | 3 | 27 | 120 | 31 | 123 | 1.60e-11 | 61.2 |
| MS.gene08461.t1 | MTR_5g009020 | 33.621 | 116 | 68 | 3 | 4 | 115 | 31 | 141 | 3.32e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.29e-138 | 389 |
| MS.gene08461.t1 | AT5G50430 | 74.180 | 244 | 58 | 2 | 1 | 240 | 1 | 243 | 2.04e-136 | 383 |
| MS.gene08461.t1 | AT5G50430 | 74.180 | 244 | 58 | 2 | 1 | 240 | 1 | 243 | 2.04e-136 | 383 |
| MS.gene08461.t1 | AT1G17280 | 75.203 | 246 | 52 | 3 | 1 | 240 | 1 | 243 | 3.61e-136 | 382 |
| MS.gene08461.t1 | AT5G50430 | 68.852 | 244 | 58 | 3 | 1 | 240 | 1 | 230 | 1.48e-121 | 345 |
| MS.gene08461.t1 | AT3G17000 | 41.912 | 136 | 76 | 2 | 6 | 139 | 12 | 146 | 1.29e-33 | 123 |
| MS.gene08461.t1 | AT5G56150 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 5.79e-17 | 75.5 |
| MS.gene08461.t1 | AT3G08690 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 3.54e-16 | 73.6 |
| MS.gene08461.t1 | AT3G08690 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 3.54e-16 | 73.6 |
| MS.gene08461.t1 | AT4G27960 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 6.00e-16 | 72.8 |
| MS.gene08461.t1 | AT1G64230 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 6.46e-16 | 72.8 |
| MS.gene08461.t1 | AT1G64230 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 6.46e-16 | 72.8 |
| MS.gene08461.t1 | AT5G41700 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 9.98e-16 | 72.4 |
| MS.gene08461.t1 | AT5G41700 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 9.98e-16 | 72.4 |
| MS.gene08461.t1 | AT5G41700 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 9.98e-16 | 72.4 |
| MS.gene08461.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.01e-15 | 72.4 |
| MS.gene08461.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.01e-15 | 72.4 |
| MS.gene08461.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.01e-15 | 72.4 |
| MS.gene08461.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.01e-15 | 72.4 |
| MS.gene08461.t1 | AT1G14400 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.14e-15 | 72.4 |
| MS.gene08461.t1 | AT1G14400 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.14e-15 | 72.4 |
| MS.gene08461.t1 | AT4G27960 | 33.333 | 117 | 69 | 3 | 8 | 120 | 34 | 145 | 1.59e-15 | 72.4 |
| MS.gene08461.t1 | AT5G41700 | 34.746 | 118 | 67 | 4 | 8 | 120 | 4 | 116 | 1.96e-15 | 71.6 |
| MS.gene08461.t1 | AT5G53300 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.19e-15 | 71.2 |
| MS.gene08461.t1 | AT5G53300 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.19e-15 | 71.2 |
| MS.gene08461.t1 | AT5G53300 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.19e-15 | 71.2 |
| MS.gene08461.t1 | AT5G62540 | 31.061 | 132 | 78 | 4 | 8 | 135 | 7 | 129 | 1.20e-14 | 69.3 |
| MS.gene08461.t1 | AT5G56150 | 33.929 | 112 | 64 | 4 | 8 | 115 | 4 | 109 | 1.88e-14 | 67.8 |
| MS.gene08461.t1 | AT2G16740 | 30.769 | 117 | 72 | 3 | 8 | 120 | 4 | 115 | 3.08e-14 | 68.2 |
| MS.gene08461.t1 | AT1G64230 | 30.000 | 120 | 71 | 4 | 5 | 120 | 47 | 157 | 1.47e-13 | 67.4 |
| MS.gene08461.t1 | AT1G64230 | 30.000 | 120 | 71 | 4 | 5 | 120 | 47 | 157 | 1.47e-13 | 67.4 |
| MS.gene08461.t1 | AT5G41700 | 33.654 | 104 | 60 | 3 | 8 | 107 | 4 | 102 | 3.32e-13 | 65.5 |
| MS.gene08461.t1 | AT1G64230 | 30.952 | 126 | 69 | 4 | 8 | 120 | 4 | 124 | 4.40e-13 | 65.5 |
| MS.gene08461.t1 | AT3G08700 | 31.356 | 118 | 71 | 4 | 8 | 120 | 4 | 116 | 5.85e-13 | 64.7 |
| MS.gene08461.t1 | AT3G08700 | 31.356 | 118 | 71 | 4 | 8 | 120 | 4 | 116 | 5.85e-13 | 64.7 |
| MS.gene08461.t1 | AT5G53300 | 32.692 | 104 | 61 | 3 | 8 | 107 | 4 | 102 | 1.87e-12 | 62.4 |
| MS.gene08461.t1 | AT1G36340 | 30.841 | 107 | 68 | 3 | 3 | 107 | 6 | 108 | 2.70e-12 | 63.2 |
| MS.gene08461.t1 | AT1G36340 | 30.841 | 107 | 68 | 3 | 3 | 107 | 6 | 108 | 2.70e-12 | 63.2 |
| MS.gene08461.t1 | AT5G25760 | 28.800 | 125 | 79 | 4 | 4 | 122 | 2 | 122 | 2.94e-11 | 60.5 |
| MS.gene08461.t1 | AT5G25760 | 28.800 | 125 | 79 | 4 | 4 | 122 | 2 | 122 | 2.94e-11 | 60.5 |
| MS.gene08461.t1 | AT3G13550 | 28.319 | 113 | 80 | 1 | 8 | 120 | 39 | 150 | 8.23e-11 | 59.3 |
Find 66 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGGATTCCAACTTTC+AGG | 0.160053 | 8.2:+72476481 | None:intergenic |
| TTATTACTCTTCTCCATCTT+TGG | 0.164344 | 8.2:-72475219 | MS.gene08461:CDS |
| CTCCATCTTTGGGGTTGTTA+TGG | 0.233457 | 8.2:-72475208 | MS.gene08461:CDS |
| GTGAAGGACGGGCCACAATA+TGG | 0.237187 | 8.2:+72477316 | None:intergenic |
| TATTACTCTTCTCCATCTTT+GGG | 0.241159 | 8.2:-72475218 | MS.gene08461:CDS |
| CTGATTCCAGGAGGTTTATA+AGG | 0.284681 | 8.2:+72476754 | None:intergenic |
| TAAAAGTCCGAGGTCTGTTT+TGG | 0.291867 | 8.2:-72475340 | MS.gene08461:CDS |
| TTCCTTGCAGTGCAACATTC+AGG | 0.294415 | 8.2:-72475458 | MS.gene08461:intron |
| TATGAATGCAGCATACTTAC+CGG | 0.344644 | 8.2:-72476279 | MS.gene08461:intron |
| TACCGGGCTTCTTTCATTCA+TGG | 0.353871 | 8.2:-72476262 | MS.gene08461:intron |
| TGTAGCATGACAACACCTAA+TGG | 0.360595 | 8.2:-72476650 | MS.gene08461:intron |
| CTTATAAACCTCCTGGAATC+AGG | 0.389083 | 8.2:-72476753 | MS.gene08461:intron |
| CCACAGGAGAAGACTTGAAA+AGG | 0.427561 | 8.2:-72475302 | MS.gene08461:CDS |
| ACAAGAAGGCACCTGATTCC+AGG | 0.429061 | 8.2:+72476742 | None:intergenic |
| CGGGCCACAATATGGGAAAC+TGG | 0.431636 | 8.2:+72477324 | None:intergenic |
| GTTGTACTTCTCCACGTACT+CGG | 0.441817 | 8.2:+72475425 | None:intergenic |
| TGTGTCATGAACCGCCCATT+AGG | 0.446261 | 8.2:+72476635 | None:intergenic |
| GAAGACTTGAAAAGGGTTGA+GGG | 0.448975 | 8.2:-72475294 | MS.gene08461:CDS |
| AGCGAGGGAACACCTTTCTC+AGG | 0.450214 | 8.2:-72476949 | MS.gene08461:intron |
| TTGTACTTCTCCACGTACTC+GGG | 0.458106 | 8.2:+72475426 | None:intergenic |
| TTGCAGTTCATCCTGAAAGT+TGG | 0.464526 | 8.2:-72476492 | MS.gene08461:intron |
| GAAAAGGGTTGAGGGATTGA+AGG | 0.471212 | 8.2:-72475286 | MS.gene08461:CDS |
| GAATATCCTTATAAACCTCC+TGG | 0.476050 | 8.2:-72476760 | MS.gene08461:CDS |
| GTAGCATGACAACACCTAAT+GGG | 0.487721 | 8.2:-72476649 | MS.gene08461:intron |
| TGCCATAACAACCCCAAAGA+TGG | 0.488741 | 8.2:+72475206 | None:intergenic |
| TGAAGGACGGGCCACAATAT+GGG | 0.495022 | 8.2:+72477317 | None:intergenic |
| AGAAGACTTGAAAAGGGTTG+AGG | 0.497193 | 8.2:-72475295 | MS.gene08461:CDS |
| TCATATCTCAGATTACGTAT+TGG | 0.507101 | 8.2:-72476977 | MS.gene08461:intron |
| GGAGCCAGTTTCCCATATTG+TGG | 0.524830 | 8.2:-72477328 | MS.gene08461:CDS |
| TACACTGCCAGTGGTTGGAC+TGG | 0.524839 | 8.2:+72475608 | None:intergenic |
| AGTAATAACATCATCCAGGT+TGG | 0.531733 | 8.2:+72475234 | None:intergenic |
| CGCCACTCAAGAATATCACT+TGG | 0.539408 | 8.2:+72477294 | None:intergenic |
| GAAAACAAGGATTTCCAACC+TGG | 0.547451 | 8.2:-72475248 | MS.gene08461:CDS |
| ATGCATCAAGCGCCTTCAGA+AGG | 0.549944 | 8.2:-72477786 | MS.gene08461:CDS |
| AATATCACTTGGTGAAGGAC+GGG | 0.551464 | 8.2:+72477305 | None:intergenic |
| ATCCAATGTGGTCTGTATCA+AGG | 0.552283 | 8.2:-72476468 | MS.gene08461:intron |
| ATTACTCTTCTCCATCTTTG+GGG | 0.552481 | 8.2:-72475217 | MS.gene08461:CDS |
| GAATATCACTTGGTGAAGGA+CGG | 0.560660 | 8.2:+72477304 | None:intergenic |
| TAATTTGCTAAACCTGAGAA+AGG | 0.560758 | 8.2:+72476937 | None:intergenic |
| GAAGAGTAATAACATCATCC+AGG | 0.567563 | 8.2:+72475230 | None:intergenic |
| TACCATGAATGAAAGAAGCC+CGG | 0.570761 | 8.2:+72476260 | None:intergenic |
| CACAGGAGAAGACTTGAAAA+GGG | 0.572298 | 8.2:-72475301 | MS.gene08461:CDS |
| GAAAACAATGTAGAGTCCAC+AGG | 0.573857 | 8.2:-72475318 | MS.gene08461:CDS |
| CAGCCAACGTCATCAGAGAC+TGG | 0.574761 | 8.2:-72475369 | MS.gene08461:CDS |
| TTGAGGGATTGAAGGATGCG+AGG | 0.577968 | 8.2:-72475278 | MS.gene08461:CDS |
| GTGCTCTATACTCCTTCTGA+AGG | 0.582054 | 8.2:+72477774 | None:intergenic |
| ATGAATGCAGCATACTTACC+GGG | 0.582437 | 8.2:-72476278 | MS.gene08461:intron |
| ATCTCAGATTACGTATTGGA+AGG | 0.583968 | 8.2:-72476973 | MS.gene08461:intron |
| AAAATTCACAGCTGGAGTAG+AGG | 0.587096 | 8.2:+72475180 | None:intergenic |
| GTGTTTACACTGCCAGTGGT+TGG | 0.587196 | 8.2:+72475603 | None:intergenic |
| GAAGATGTTCCCCGAGTACG+TGG | 0.599484 | 8.2:-72475436 | MS.gene08461:CDS |
| TGTACTTCTCCACGTACTCG+GGG | 0.603988 | 8.2:+72475427 | None:intergenic |
| ATGGATACCAGTCCAACCAC+TGG | 0.607472 | 8.2:-72475615 | MS.gene08461:CDS |
| GACCTTGATACAGACCACAT+TGG | 0.612471 | 8.2:+72476466 | None:intergenic |
| TACGTATTGGAAGGAAGCGA+GGG | 0.615267 | 8.2:-72476964 | MS.gene08461:CDS |
| GCGAGGAGAAACAGAAAACA+AGG | 0.615922 | 8.2:-72475261 | MS.gene08461:CDS |
| TTACGTATTGGAAGGAAGCG+AGG | 0.625291 | 8.2:-72476965 | MS.gene08461:CDS |
| AGTAGTGTTTACACTGCCAG+TGG | 0.639725 | 8.2:+72475599 | None:intergenic |
| CACCAAGTGATATTCTTGAG+TGG | 0.643937 | 8.2:-72477296 | MS.gene08461:CDS |
| TCAAGAATATCACTTGGTGA+AGG | 0.663216 | 8.2:+72477300 | None:intergenic |
| GGTTTATAAGGATATTCCTG+AGG | 0.670816 | 8.2:+72476766 | None:intergenic |
| CTGAAAGTTGGAATCCAATG+TGG | 0.673790 | 8.2:-72476480 | MS.gene08461:CDS |
| TGACCAGTCTCTGATGACGT+TGG | 0.673844 | 8.2:+72475366 | None:intergenic |
| GCATGACAACACCTAATGGG+CGG | 0.704176 | 8.2:-72476646 | MS.gene08461:CDS |
| CTGGTCAAGATAAAAGTCCG+AGG | 0.710589 | 8.2:-72475350 | MS.gene08461:CDS |
| AGAAGGCACCTGATTCCAGG+AGG | 0.717165 | 8.2:+72476745 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAATTAAAACATAAA+AGG | + | chr8.2:72476585-72476604 | None:intergenic | 10.0% |
| !! | GAAAAAATTAAAACATAAAA+GGG | + | chr8.2:72476584-72476603 | None:intergenic | 10.0% |
| !!! | TAATTTTTTCTTTTGAAATT+TGG | - | chr8.2:72476594-72476613 | MS.gene08461:intron | 10.0% |
| !!! | TCACTATTTATTTTTATTTA+TGG | - | chr8.2:72475282-72475301 | MS.gene08461:CDS | 10.0% |
| !!! | ACATTTTCCTTTATATTAAA+TGG | + | chr8.2:72477302-72477321 | None:intergenic | 15.0% |
| !! | AAAATTAAACTGTAGCAATA+TGG | + | chr8.2:72476454-72476473 | None:intergenic | 20.0% |
| !! | AAATTAAACTGTAGCAATAT+GGG | + | chr8.2:72476453-72476472 | None:intergenic | 20.0% |
| !! | TTCAAATATTATGATGATCT+AGG | + | chr8.2:72475592-72475611 | None:intergenic | 20.0% |
| !!! | AAGGGTTTTTCATAAAAAAA+TGG | - | chr8.2:72477082-72477101 | MS.gene08461:intron | 20.0% |
| !!! | AATTTTATTACTGTATTTGC+AGG | - | chr8.2:72475636-72475655 | MS.gene08461:intron | 20.0% |
| !!! | CATTATAAAAAGTATGAACT+TGG | + | chr8.2:72476317-72476336 | None:intergenic | 20.0% |
| !!! | TTTTTATGAAAAACCCTTTT+CGG | + | chr8.2:72477080-72477099 | None:intergenic | 20.0% |
| ! | AACAGAATATGTTGAATCTT+TGG | - | chr8.2:72475784-72475803 | MS.gene08461:intron | 25.0% |
| ! | AAGTTGAGATAGTAATAAAC+TGG | + | chr8.2:72476137-72476156 | None:intergenic | 25.0% |
| ! | AGTTGAGATAGTAATAAACT+GGG | + | chr8.2:72476136-72476155 | None:intergenic | 25.0% |
| ! | ATAAATACACAAGAATAGAG+AGG | + | chr8.2:72475371-72475390 | None:intergenic | 25.0% |
| ! | CATGGTATGTTATTATGTTA+TGG | - | chr8.2:72476741-72476760 | MS.gene08461:intron | 25.0% |
| ! | CTGAATAATTGTTTCATGAT+TGG | - | chr8.2:72475512-72475531 | MS.gene08461:intron | 25.0% |
| ! | CTGACAATATAGTAGTATTA+AGG | + | chr8.2:72475895-72475914 | None:intergenic | 25.0% |
| ! | TATACTTGTACGCATAATAA+TGG | - | chr8.2:72477206-72477225 | MS.gene08461:intron | 25.0% |
| ! | TCATGCTATAAACATTTCAT+CGG | + | chr8.2:72475428-72475447 | None:intergenic | 25.0% |
| ! | TCTTGTGTATTTATGTATCT+GGG | - | chr8.2:72475377-72475396 | MS.gene08461:CDS | 25.0% |
| ! | TGTTGAGCCATTTAATATAA+AGG | - | chr8.2:72477292-72477311 | MS.gene08461:intron | 25.0% |
| ! | TTCATATTCTAATTGAACTC+TGG | - | chr8.2:72476768-72476787 | MS.gene08461:CDS | 25.0% |
| ! | TTCTTGTGTATTTATGTATC+TGG | - | chr8.2:72475376-72475395 | MS.gene08461:CDS | 25.0% |
| ! | TTGTTTGCTCATAAGATATT+GGG | - | chr8.2:72476813-72476832 | MS.gene08461:intron | 25.0% |
| ! | TTTGTTTGCTCATAAGATAT+TGG | - | chr8.2:72476812-72476831 | MS.gene08461:intron | 25.0% |
| !! | AAAAAGAGTGATTTTCCTTA+TGG | + | chr8.2:72476913-72476932 | None:intergenic | 25.0% |
| !! | AAGCTCTAATATCCAAAAAT+GGG | - | chr8.2:72475759-72475778 | MS.gene08461:intron | 25.0% |
| !! | ATATTCTGTTTTCCCATTTT+TGG | + | chr8.2:72475774-72475793 | None:intergenic | 25.0% |
| !! | GTAATTTATTTGTTAGCTAG+TGG | - | chr8.2:72475955-72475974 | MS.gene08461:intron | 25.0% |
| !! | TAAAATTGTTGTTCCGAAAA+GGG | - | chr8.2:72477064-72477083 | MS.gene08461:intron | 25.0% |
| !! | TAATTGTTTCATGATTGGTT+AGG | - | chr8.2:72475517-72475536 | MS.gene08461:intron | 25.0% |
| !!! | AGTTTTGAAGTTCTTTTATG+TGG | - | chr8.2:72476552-72476571 | MS.gene08461:intron | 25.0% |
| !!! | CTACAGTTTAATTTTTCTGT+GGG | - | chr8.2:72476459-72476478 | MS.gene08461:intron | 25.0% |
| !!! | TACAGTTTAATTTTTCTGTG+GGG | - | chr8.2:72476460-72476479 | MS.gene08461:intron | 25.0% |
| !!! | TAGTATTTTGATGTTGTTTG+TGG | - | chr8.2:72475402-72475421 | MS.gene08461:CDS | 25.0% |
| !!! | TTTTTAGGTGGATATTACTA+TGG | - | chr8.2:72476183-72476202 | MS.gene08461:intron | 25.0% |
| ACTATAGACACACTATTAAG+AGG | + | chr8.2:72475490-72475509 | None:intergenic | 30.0% | |
| AGGAGAAAGGAAACATATAT+AGG | + | chr8.2:72475470-72475489 | None:intergenic | 30.0% | |
| AGTATGCTGCATTCATAAAT+TGG | + | chr8.2:72476703-72476722 | None:intergenic | 30.0% | |
| ATACTACTATATTGTCAGCA+AGG | - | chr8.2:72475897-72475916 | MS.gene08461:intron | 30.0% | |
| ATGTTTATAGCATGAATGAC+TGG | - | chr8.2:72475433-72475452 | MS.gene08461:CDS | 30.0% | |
| GATTTGTGTTCCACAATTAA+TGG | - | chr8.2:72477500-72477519 | MS.gene08461:intron | 30.0% | |
| GTATACAACAAAGACTACTA+TGG | + | chr8.2:72477191-72477210 | None:intergenic | 30.0% | |
| TATTACTCTTCTCCATCTTT+GGG | - | chr8.2:72477767-72477786 | MS.gene08461:CDS | 30.0% | |
| TCATATCTCAGATTACGTAT+TGG | - | chr8.2:72476008-72476027 | MS.gene08461:intron | 30.0% | |
| TGGGTAACTATGATACAAAT+CGG | + | chr8.2:72476434-72476453 | None:intergenic | 30.0% | |
| TGTTTATAGCATGAATGACT+GGG | - | chr8.2:72475434-72475453 | MS.gene08461:CDS | 30.0% | |
| TTATTACTCTTCTCCATCTT+TGG | - | chr8.2:72477766-72477785 | MS.gene08461:CDS | 30.0% | |
| ! | CAAGCTCTAATATCCAAAAA+TGG | - | chr8.2:72475758-72475777 | MS.gene08461:intron | 30.0% |
| ! | CTAAAATTGTTGTTCCGAAA+AGG | - | chr8.2:72477063-72477082 | MS.gene08461:intron | 30.0% |
| ! | CTTTTCGGAACAACAATTTT+AGG | + | chr8.2:72477065-72477084 | None:intergenic | 30.0% |
| ! | TAGTGAAGAGCAATTTTTGT+CGG | + | chr8.2:72475268-72475287 | None:intergenic | 30.0% |
| ! | TTGTAAGTTCTTTTACCCAT+TGG | - | chr8.2:72476400-72476419 | MS.gene08461:intron | 30.0% |
| ! | TTTTGCGTTTGTTTACCATA+AGG | - | chr8.2:72476895-72476914 | MS.gene08461:intron | 30.0% |
| !! | CTCTTTGAAATCATTGTTGA+TGG | + | chr8.2:72476947-72476966 | None:intergenic | 30.0% |
| !! | GCTACAGTTTAATTTTTCTG+TGG | - | chr8.2:72476458-72476477 | MS.gene08461:intron | 30.0% |
| !! | TAATTTGCTAAACCTGAGAA+AGG | + | chr8.2:72476051-72476070 | None:intergenic | 30.0% |
| !!! | ACGTTTTTTGTTCGCTTTTT+AGG | - | chr8.2:72476168-72476187 | MS.gene08461:intron | 30.0% |
| !!! | TTTTTTGTTCGCTTTTTAGG+TGG | - | chr8.2:72476171-72476190 | MS.gene08461:intron | 30.0% |
| AAGGAAAGAGCCATTAATTG+TGG | + | chr8.2:72477513-72477532 | None:intergenic | 35.0% | |
| ACACACTATTAAGAGGAGAA+AGG | + | chr8.2:72475483-72475502 | None:intergenic | 35.0% | |
| AGTAATAACATCATCCAGGT+TGG | + | chr8.2:72477754-72477773 | None:intergenic | 35.0% | |
| ATCTCAGATTACGTATTGGA+AGG | - | chr8.2:72476012-72476031 | MS.gene08461:intron | 35.0% | |
| ATGATCTAGGCAATTGATAC+AGG | + | chr8.2:72475579-72475598 | None:intergenic | 35.0% | |
| ATTACTCTTCTCCATCTTTG+GGG | - | chr8.2:72477768-72477787 | MS.gene08461:CDS | 35.0% | |
| CAAACAAATGCCATATGAGA+TGG | + | chr8.2:72476800-72476819 | None:intergenic | 35.0% | |
| CTGCACAACAAAATAAGCAT+TGG | + | chr8.2:72475310-72475329 | None:intergenic | 35.0% | |
| GAAGAGTAATAACATCATCC+AGG | + | chr8.2:72477758-72477777 | None:intergenic | 35.0% | |
| GAATATCCTTATAAACCTCC+TGG | - | chr8.2:72476225-72476244 | MS.gene08461:intron | 35.0% | |
| GATAGTAATAAACTGGGTGT+TGG | + | chr8.2:72476130-72476149 | None:intergenic | 35.0% | |
| GGTTTATAAGGATATTCCTG+AGG | + | chr8.2:72476222-72476241 | None:intergenic | 35.0% | |
| TACTATATTGTCAGCAAGGA+AGG | - | chr8.2:72475901-72475920 | MS.gene08461:intron | 35.0% | |
| TATGAATGCAGCATACTTAC+CGG | - | chr8.2:72476706-72476725 | MS.gene08461:intron | 35.0% | |
| TGGAAAAATCAAGTTTCCTC+AGG | - | chr8.2:72476203-72476222 | MS.gene08461:intron | 35.0% | |
| TGGTTGTATTGTTTGCACTA+GGG | - | chr8.2:72476614-72476633 | MS.gene08461:CDS | 35.0% | |
| TTGGTTGTATTGTTTGCACT+AGG | - | chr8.2:72476613-72476632 | MS.gene08461:CDS | 35.0% | |
| ! | TCAAGAATATCACTTGGTGA+AGG | + | chr8.2:72475688-72475707 | None:intergenic | 35.0% |
| ! | TTGTTTTCCAAAACAGACCT+CGG | + | chr8.2:72477655-72477674 | None:intergenic | 35.0% |
| !! | AAATCGGTTTGTCTTCCAAT+GGG | + | chr8.2:72476418-72476437 | None:intergenic | 35.0% |
| !! | TTAGCTTGTTCTGTGATCAT+TGG | - | chr8.2:72475338-72475357 | MS.gene08461:CDS | 35.0% |
| ACCCAAAAAACCGCTAAAAG+AGG | + | chr8.2:72477129-72477148 | None:intergenic | 40.0% | |
| AGAAGACTTGAAAAGGGTTG+AGG | - | chr8.2:72477690-72477709 | MS.gene08461:intron | 40.0% | |
| AGCTTATGAACACCTACAAC+GGG | + | chr8.2:72477273-72477292 | None:intergenic | 40.0% | |
| AGGCAAATGCAAGAGTGATA+TGG | + | chr8.2:72477109-72477128 | None:intergenic | 40.0% | |
| ATCCAATGTGGTCTGTATCA+AGG | - | chr8.2:72476517-72476536 | MS.gene08461:intron | 40.0% | |
| ATGAATGCAGCATACTTACC+GGG | - | chr8.2:72476707-72476726 | MS.gene08461:intron | 40.0% | |
| CACAGGAGAAGACTTGAAAA+GGG | - | chr8.2:72477684-72477703 | MS.gene08461:intron | 40.0% | |
| CACATTGGATTCCAACTTTC+AGG | + | chr8.2:72476507-72476526 | None:intergenic | 40.0% | |
| CACCAAGTGATATTCTTGAG+TGG | - | chr8.2:72475689-72475708 | MS.gene08461:intron | 40.0% | |
| CAGCTTATGAACACCTACAA+CGG | + | chr8.2:72477274-72477293 | None:intergenic | 40.0% | |
| CTACAGTGTGTACTTCACAA+AGG | - | chr8.2:72475540-72475559 | MS.gene08461:intron | 40.0% | |
| CTGAAAGTTGGAATCCAATG+TGG | - | chr8.2:72476505-72476524 | MS.gene08461:intron | 40.0% | |
| CTGATTCCAGGAGGTTTATA+AGG | + | chr8.2:72476234-72476253 | None:intergenic | 40.0% | |
| CTGGTTTCTTCCATCTCATA+TGG | - | chr8.2:72476787-72476806 | MS.gene08461:CDS | 40.0% | |
| CTTATAAACCTCCTGGAATC+AGG | - | chr8.2:72476232-72476251 | MS.gene08461:intron | 40.0% | |
| GAAAACAAGGATTTCCAACC+TGG | - | chr8.2:72477737-72477756 | MS.gene08461:intron | 40.0% | |
| GAAAACAATGTAGAGTCCAC+AGG | - | chr8.2:72477667-72477686 | MS.gene08461:intron | 40.0% | |
| GAAGACTTGAAAAGGGTTGA+GGG | - | chr8.2:72477691-72477710 | MS.gene08461:intron | 40.0% | |
| GAGACATTGCTCAATGTTGA+TGG | + | chr8.2:72477479-72477498 | None:intergenic | 40.0% | |
| GGCAAATGCAAGAGTGATAT+GGG | + | chr8.2:72477108-72477127 | None:intergenic | 40.0% | |
| GTAAAACCCATATGACCAAC+TGG | - | chr8.2:72475827-72475846 | MS.gene08461:intron | 40.0% | |
| GTAGCATGACAACACCTAAT+GGG | - | chr8.2:72476336-72476355 | MS.gene08461:intron | 40.0% | |
| GTATTGTTTGCACTAGGGAA+TGG | - | chr8.2:72476619-72476638 | MS.gene08461:CDS | 40.0% | |
| GTTTCAGCTGTATTGTGTGT+TGG | - | chr8.2:72476094-72476113 | MS.gene08461:intron | 40.0% | |
| TACCATGAATGAAAGAAGCC+CGG | + | chr8.2:72476728-72476747 | None:intergenic | 40.0% | |
| TCAAGAATGCTGCAACAAGA+AGG | + | chr8.2:72476260-72476279 | None:intergenic | 40.0% | |
| TGTAGCATGACAACACCTAA+TGG | - | chr8.2:72476335-72476354 | MS.gene08461:intron | 40.0% | |
| TTGCAGTTCATCCTGAAAGT+TGG | - | chr8.2:72476493-72476512 | MS.gene08461:intron | 40.0% | |
| ! | AATATCACTTGGTGAAGGAC+GGG | + | chr8.2:72475683-72475702 | None:intergenic | 40.0% |
| ! | ACAGACTTCTCTTTTGCAGA+TGG | - | chr8.2:72477351-72477370 | MS.gene08461:intron | 40.0% |
| ! | CTTGCATTTGCCTCTTTTAG+CGG | - | chr8.2:72477116-72477135 | MS.gene08461:intron | 40.0% |
| ! | GAATATCACTTGGTGAAGGA+CGG | + | chr8.2:72475684-72475703 | None:intergenic | 40.0% |
| ! | GCCTCTTTTAGCGGTTTTTT+GGG | - | chr8.2:72477125-72477144 | MS.gene08461:intron | 40.0% |
| ! | TAAAAGTCCGAGGTCTGTTT+TGG | - | chr8.2:72477645-72477664 | MS.gene08461:intron | 40.0% |
| ! | TGCCTCTTTTAGCGGTTTTT+TGG | - | chr8.2:72477124-72477143 | MS.gene08461:intron | 40.0% |
| !! | ATTGCTCAATGTTGATGGTG+CGG | + | chr8.2:72477474-72477493 | None:intergenic | 40.0% |
| !! | CAAACCTTACTTTTGCTCTC+GGG | - | chr8.2:72475861-72475880 | MS.gene08461:intron | 40.0% |
| !! | CAAATCGGTTTGTCTTCCAA+TGG | + | chr8.2:72476419-72476438 | None:intergenic | 40.0% |
| !! | GCAAACCTTACTTTTGCTCT+CGG | - | chr8.2:72475860-72475879 | MS.gene08461:intron | 40.0% |
| !!! | CTTTTAGCGGTTTTTTGGGT+AGG | - | chr8.2:72477129-72477148 | MS.gene08461:intron | 40.0% |
| !!! | GTTTTTTGGGTAGGTTGGTT+GGG | - | chr8.2:72477138-72477157 | MS.gene08461:intron | 40.0% |
| AGTAGTGTTTACACTGCCAG+TGG | + | chr8.2:72477389-72477408 | None:intergenic | 45.0% | |
| CAGTGTGTACTTCACAAAGG+TGG | - | chr8.2:72475543-72475562 | MS.gene08461:intron | 45.0% | |
| CCACAGGAGAAGACTTGAAA+AGG | - | chr8.2:72477683-72477702 | MS.gene08461:intron | 45.0% | |
| CGCCACTCAAGAATATCACT+TGG | + | chr8.2:72475694-72475713 | None:intergenic | 45.0% | |
| CTGGTCAAGATAAAAGTCCG+AGG | - | chr8.2:72477635-72477654 | MS.gene08461:intron | 45.0% | |
| CTTATGAACACCTACAACGG+GGG | + | chr8.2:72477271-72477290 | None:intergenic | 45.0% | |
| GAAAAGGGTTGAGGGATTGA+AGG | - | chr8.2:72477699-72477718 | MS.gene08461:intron | 45.0% | |
| GACCTTGATACAGACCACAT+TGG | + | chr8.2:72476522-72476541 | None:intergenic | 45.0% | |
| GCGAGGAGAAACAGAAAACA+AGG | - | chr8.2:72477724-72477743 | MS.gene08461:intron | 45.0% | |
| GCTTATGAACACCTACAACG+GGG | + | chr8.2:72477272-72477291 | None:intergenic | 45.0% | |
| GTGCTCTATACTCCTTCTGA+AGG | + | chr8.2:72475214-72475233 | None:intergenic | 45.0% | |
| GTTGTACTTCTCCACGTACT+CGG | + | chr8.2:72477563-72477582 | None:intergenic | 45.0% | |
| TACCGGGCTTCTTTCATTCA+TGG | - | chr8.2:72476723-72476742 | MS.gene08461:intron | 45.0% | |
| TACGTATTGGAAGGAAGCGA+GGG | - | chr8.2:72476021-72476040 | MS.gene08461:intron | 45.0% | |
| TGCCATAACAACCCCAAAGA+TGG | + | chr8.2:72477782-72477801 | None:intergenic | 45.0% | |
| TTACGTATTGGAAGGAAGCG+AGG | - | chr8.2:72476020-72476039 | MS.gene08461:intron | 45.0% | |
| TTCCTGAATGTTGCACTGCA+AGG | + | chr8.2:72477532-72477551 | None:intergenic | 45.0% | |
| TTCCTTGCAGTGCAACATTC+AGG | - | chr8.2:72477527-72477546 | MS.gene08461:intron | 45.0% | |
| TTGCGACCAGTTGGTCATAT+GGG | + | chr8.2:72475836-72475855 | None:intergenic | 45.0% | |
| TTGTACTTCTCCACGTACTC+GGG | + | chr8.2:72477562-72477581 | None:intergenic | 45.0% | |
| ! | TTTTGCTAGACGCTGCTTCT+CGG | + | chr8.2:72477416-72477435 | None:intergenic | 45.0% |
| !! | CTCCATCTTTGGGGTTGTTA+TGG | - | chr8.2:72477777-72477796 | MS.gene08461:CDS | 45.0% |
| !!! | CCTTTTCAAGTCTTCTCCTG+TGG | + | chr8.2:72477686-72477705 | None:intergenic | 45.0% |
| !!! | GGTTTTTTGGGTAGGTTGGT+TGG | - | chr8.2:72477137-72477156 | MS.gene08461:intron | 45.0% |
| !!! | TAGCGGTTTTTTGGGTAGGT+TGG | - | chr8.2:72477133-72477152 | MS.gene08461:intron | 45.0% |
| AGAGCCCGAGAGCAAAAGTA+AGG | + | chr8.2:72475868-72475887 | None:intergenic | 50.0% | |
| ATGCATCAAGCGCCTTCAGA+AGG | - | chr8.2:72475199-72475218 | MS.gene08461:CDS | 50.0% | |
| ATGGATACCAGTCCAACCAC+TGG | - | chr8.2:72477370-72477389 | MS.gene08461:intron | 50.0% | |
| GCATGACAACACCTAATGGG+CGG | - | chr8.2:72476339-72476358 | MS.gene08461:intron | 50.0% | |
| GGAGCCAGTTTCCCATATTG+TGG | - | chr8.2:72475657-72475676 | MS.gene08461:intron | 50.0% | |
| GTGTTTACACTGCCAGTGGT+TGG | + | chr8.2:72477385-72477404 | None:intergenic | 50.0% | |
| GTTGCGACCAGTTGGTCATA+TGG | + | chr8.2:72475837-72475856 | None:intergenic | 50.0% | |
| TGAAGGACGGGCCACAATAT+GGG | + | chr8.2:72475671-72475690 | None:intergenic | 50.0% | |
| TGTACTTCTCCACGTACTCG+GGG | + | chr8.2:72477561-72477580 | None:intergenic | 50.0% | |
| TGTGTCATGAACCGCCCATT+AGG | + | chr8.2:72476353-72476372 | None:intergenic | 50.0% | |
| TTGAGGGATTGAAGGATGCG+AGG | - | chr8.2:72477707-72477726 | MS.gene08461:intron | 50.0% | |
| TTGTTAAGCTCCCCCGTTGT+AGG | - | chr8.2:72477258-72477277 | MS.gene08461:intron | 50.0% | |
| ! | TGACCAGTCTCTGATGACGT+TGG | + | chr8.2:72477622-72477641 | None:intergenic | 50.0% |
| !! | ACAAGAAGGCACCTGATTCC+AGG | + | chr8.2:72476246-72476265 | None:intergenic | 50.0% |
| !! | TTGGGTAGGTTGGTTGGGAT+GGG | - | chr8.2:72477143-72477162 | MS.gene08461:intron | 50.0% |
| !! | TTTGGGTAGGTTGGTTGGGA+TGG | - | chr8.2:72477142-72477161 | MS.gene08461:intron | 50.0% |
| AGCGAGGGAACACCTTTCTC+AGG | - | chr8.2:72476036-72476055 | MS.gene08461:intron | 55.0% | |
| CAGCCAACGTCATCAGAGAC+TGG | - | chr8.2:72477616-72477635 | MS.gene08461:intron | 55.0% | |
| CGGGCCACAATATGGGAAAC+TGG | + | chr8.2:72475664-72475683 | None:intergenic | 55.0% | |
| GAAGATGTTCCCCGAGTACG+TGG | - | chr8.2:72477549-72477568 | MS.gene08461:intron | 55.0% | |
| GTGAAGGACGGGCCACAATA+TGG | + | chr8.2:72475672-72475691 | None:intergenic | 55.0% | |
| TACACTGCCAGTGGTTGGAC+TGG | + | chr8.2:72477380-72477399 | None:intergenic | 55.0% | |
| TTTGCTGCGTTGCGACCAGT+TGG | + | chr8.2:72475845-72475864 | None:intergenic | 55.0% | |
| !! | AGAAGGCACCTGATTCCAGG+AGG | + | chr8.2:72476243-72476262 | None:intergenic | 55.0% |
| !! | GTAGGTTGGTTGGGATGGGA+GGG | - | chr8.2:72477147-72477166 | MS.gene08461:intron | 55.0% |
| !! | TAGGTTGGTTGGGATGGGAG+GGG | - | chr8.2:72477148-72477167 | MS.gene08461:intron | 55.0% |
| !! | GGTAGGTTGGTTGGGATGGG+AGG | - | chr8.2:72477146-72477165 | MS.gene08461:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 72475185 | 72477822 | 72475185 | ID=MS.gene08461 |
| chr8.2 | mRNA | 72475185 | 72477822 | 72475185 | ID=MS.gene08461.t1;Parent=MS.gene08461 |
| chr8.2 | exon | 72477766 | 72477822 | 72477766 | ID=MS.gene08461.t1.exon1;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72477766 | 72477822 | 72477766 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72477295 | 72477349 | 72477295 | ID=MS.gene08461.t1.exon2;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72477295 | 72477349 | 72477295 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72476950 | 72476988 | 72476950 | ID=MS.gene08461.t1.exon3;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72476950 | 72476988 | 72476950 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72476754 | 72476817 | 72476754 | ID=MS.gene08461.t1.exon4;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72476754 | 72476817 | 72476754 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72476606 | 72476667 | 72476606 | ID=MS.gene08461.t1.exon5;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72476606 | 72476667 | 72476606 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72476469 | 72476508 | 72476469 | ID=MS.gene08461.t1.exon6;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72476469 | 72476508 | 72476469 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72476263 | 72476290 | 72476263 | ID=MS.gene08461.t1.exon7;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72476263 | 72476290 | 72476263 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72475546 | 72475637 | 72475546 | ID=MS.gene08461.t1.exon8;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72475546 | 72475637 | 72475546 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| chr8.2 | exon | 72475185 | 72475470 | 72475185 | ID=MS.gene08461.t1.exon9;Parent=MS.gene08461.t1 |
| chr8.2 | CDS | 72475185 | 72475470 | 72475185 | ID=cds.MS.gene08461.t1;Parent=MS.gene08461.t1 |
| Gene Sequence |
| Protein sequence |
