Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92981.t1 | XP_013470094.1 | 97 | 633 | 18 | 1 | 134 | 766 | 136 | 767 | 0.00E+00 | 1196.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92981.t1 | Q2TBE0 | 28.6 | 709 | 358 | 22 | 192 | 763 | 196 | 893 | 2.9e-52 | 208.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92981.t1 | A0A072VQQ5 | 97.0 | 633 | 18 | 1 | 134 | 766 | 136 | 767 | 0.0e+00 | 1196.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene92981 | 0.862617 | 4.46E-64 | -1.69E-46 |
| MS.gene049159 | MS.gene92981 | 0.837073 | 6.44E-57 | -1.69E-46 |
| MS.gene04918 | MS.gene92981 | 0.840351 | 9.16E-58 | -1.69E-46 |
| MS.gene04920 | MS.gene92981 | 0.824562 | 7.55E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene92981 | 0.838137 | 3.44E-57 | -1.69E-46 |
| MS.gene049283 | MS.gene92981 | 0.827606 | 1.43E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene92981 | 0.860863 | 1.54E-63 | -1.69E-46 |
| MS.gene049419 | MS.gene92981 | -0.803227 | 3.85E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene92981 | 0.823671 | 1.22E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene92981 | 0.860299 | 2.27E-63 | -1.69E-46 |
| MS.gene049711 | MS.gene92981 | 0.805376 | 1.38E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene92981 | 0.886324 | 3.78E-72 | -1.69E-46 |
| MS.gene050551 | MS.gene92981 | 0.823636 | 1.25E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene92981 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene92981 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene92981 | 0.800482 | 1.41E-48 | -1.69E-46 |
| MS.gene050646 | MS.gene92981 | 0.858466 | 8.08E-63 | -1.69E-46 |
| MS.gene050654 | MS.gene92981 | 0.833326 | 5.69E-56 | -1.69E-46 |
| MS.gene050689 | MS.gene92981 | 0.827356 | 1.64E-54 | -1.69E-46 |
| MS.gene050737 | MS.gene92981 | 0.80122 | 9.98E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene92981 | 0.83015 | 3.45E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene92981 | 0.805119 | 1.56E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene92981 | 0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene92981 | 0.821461 | 3.99E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene92981 | 0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene051332 | MS.gene92981 | 0.825073 | 5.72E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene92981 | 0.803872 | 2.83E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene92981 | 0.849431 | 3.25E-60 | -1.69E-46 |
| MS.gene051365 | MS.gene92981 | 0.842026 | 3.32E-58 | -1.69E-46 |
| MS.gene051676 | MS.gene92981 | 0.814311 | 1.64E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene92981 | 0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene92981 | 0.821008 | 5.07E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene92981 | 0.842607 | 2.33E-58 | -1.69E-46 |
| MS.gene052307 | MS.gene92981 | 0.859142 | 5.07E-63 | -1.69E-46 |
| MS.gene052342 | MS.gene92981 | 0.810089 | 1.37E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene92981 | 0.843571 | 1.29E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene92981 | 0.837205 | 5.96E-57 | -1.69E-46 |
| MS.gene052518 | MS.gene92981 | 0.853781 | 1.90E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene92981 | 0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene052533 | MS.gene92981 | 0.809196 | 2.13E-50 | -1.69E-46 |
| MS.gene052534 | MS.gene92981 | 0.82905 | 6.39E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene92981 | 0.826282 | 2.96E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene92981 | 0.805275 | 1.44E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene92981 | 0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene92981 | 0.816541 | 5.24E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene92981 | 0.812536 | 4.04E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene92981 | 0.827477 | 1.53E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene92981 | 0.832428 | 9.51E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene92981 | 0.820765 | 5.77E-53 | -1.69E-46 |
| MS.gene053272 | MS.gene92981 | -0.83854 | 2.71E-57 | -1.69E-46 |
| MS.gene053427 | MS.gene92981 | 0.822259 | 2.61E-53 | -1.69E-46 |
| MS.gene05350 | MS.gene92981 | 0.835934 | 1.26E-56 | -1.69E-46 |
| MS.gene053541 | MS.gene92981 | 0.811642 | 6.32E-51 | -1.69E-46 |
| MS.gene053542 | MS.gene92981 | 0.825616 | 4.25E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene92981 | 0.818921 | 1.52E-52 | -1.69E-46 |
| MS.gene053879 | MS.gene92981 | 0.802682 | 5.00E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene92981 | 0.824803 | 6.62E-54 | -1.69E-46 |
| MS.gene054004 | MS.gene92981 | 0.804143 | 2.49E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene92981 | 0.821961 | 3.06E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene92981 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene05423 | MS.gene92981 | 0.806302 | 8.79E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene92981 | 0.816875 | 4.41E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene92981 | 0.850367 | 1.78E-60 | -1.69E-46 |
| MS.gene054641 | MS.gene92981 | 0.808425 | 3.12E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene92981 | 0.870088 | 1.90E-66 | -1.69E-46 |
| MS.gene054709 | MS.gene92981 | 0.814282 | 1.67E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene92981 | 0.811543 | 6.64E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene92981 | 0.807633 | 4.59E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene92981 | 0.845441 | 4.05E-59 | -1.69E-46 |
| MS.gene055586 | MS.gene92981 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene055724 | MS.gene92981 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene92981 | 0.823493 | 1.34E-53 | -1.69E-46 |
| MS.gene055841 | MS.gene92981 | 0.843675 | 1.21E-58 | -1.69E-46 |
| MS.gene055864 | MS.gene92981 | 0.821214 | 4.55E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene92981 | 0.802182 | 6.33E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene92981 | 0.81326 | 2.80E-51 | -1.69E-46 |
| MS.gene056162 | MS.gene92981 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene92981 | 0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene056215 | MS.gene92981 | 0.808214 | 3.46E-50 | -1.69E-46 |
| MS.gene056252 | MS.gene92981 | 0.801106 | 1.05E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene92981 | 0.803585 | 3.25E-49 | -1.69E-46 |
| MS.gene056363 | MS.gene92981 | 0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene92981 | 0.806156 | 9.43E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene92981 | 0.836089 | 1.15E-56 | -1.69E-46 |
| MS.gene056776 | MS.gene92981 | 0.812999 | 3.20E-51 | -1.69E-46 |
| MS.gene056786 | MS.gene92981 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene056825 | MS.gene92981 | 0.801795 | 7.61E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene92981 | 0.865438 | 5.90E-65 | -1.69E-46 |
| MS.gene05690 | MS.gene92981 | 0.863806 | 1.91E-64 | -1.69E-46 |
| MS.gene056973 | MS.gene92981 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene92981 | 0.807581 | 4.71E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene92981 | 0.838791 | 2.33E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene92981 | 0.861819 | 7.85E-64 | -1.69E-46 |
| MS.gene057132 | MS.gene92981 | 0.813943 | 1.98E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene92981 | 0.872087 | 4.16E-67 | -1.69E-46 |
| MS.gene057371 | MS.gene92981 | 0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene92981 | 0.846047 | 2.78E-59 | -1.69E-46 |
| MS.gene057855 | MS.gene92981 | 0.834292 | 3.26E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene92981 | 0.821588 | 3.73E-53 | -1.69E-46 |
| MS.gene058008 | MS.gene92981 | 0.850335 | 1.81E-60 | -1.69E-46 |
| MS.gene058009 | MS.gene92981 | 0.85564 | 5.51E-62 | -1.69E-46 |
| MS.gene058010 | MS.gene92981 | 0.849088 | 4.05E-60 | -1.69E-46 |
| MS.gene058037 | MS.gene92981 | 0.818671 | 1.74E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene92981 | 0.816969 | 4.20E-52 | -1.69E-46 |
| MS.gene058159 | MS.gene92981 | 0.803696 | 3.08E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene92981 | 0.868597 | 5.80E-66 | -1.69E-46 |
| MS.gene058427 | MS.gene92981 | 0.840126 | 1.05E-57 | -1.69E-46 |
| MS.gene058625 | MS.gene92981 | 0.819164 | 1.34E-52 | -1.69E-46 |
| MS.gene058781 | MS.gene92981 | 0.885718 | 6.38E-72 | -1.69E-46 |
| MS.gene058783 | MS.gene92981 | 0.875605 | 2.70E-68 | -1.69E-46 |
| MS.gene058979 | MS.gene92981 | 0.8497 | 2.73E-60 | -1.69E-46 |
| MS.gene05897 | MS.gene92981 | 0.842509 | 2.48E-58 | -1.69E-46 |
| MS.gene059146 | MS.gene92981 | 0.817191 | 3.75E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene92981 | 0.81155 | 6.62E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene92981 | 0.805515 | 1.29E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene92981 | 0.827126 | 1.86E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene92981 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene92981 | 0.814097 | 1.83E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene92981 | 0.84149 | 4.61E-58 | -1.69E-46 |
| MS.gene05985 | MS.gene92981 | -0.827294 | 1.69E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene92981 | 0.800088 | 1.70E-48 | -1.69E-46 |
| MS.gene060011 | MS.gene92981 | 0.802671 | 5.02E-49 | -1.69E-46 |
| MS.gene060085 | MS.gene92981 | 0.836204 | 1.07E-56 | -1.69E-46 |
| MS.gene060244 | MS.gene92981 | 0.827226 | 1.76E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene92981 | 0.813879 | 2.05E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene92981 | 0.827239 | 1.75E-54 | -1.69E-46 |
| MS.gene060435 | MS.gene92981 | 0.840228 | 9.87E-58 | -1.69E-46 |
| MS.gene060522 | MS.gene92981 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene060527 | MS.gene92981 | 0.816798 | 4.59E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene92981 | 0.81793 | 2.55E-52 | -1.69E-46 |
| MS.gene060777 | MS.gene92981 | 0.801913 | 7.20E-49 | -1.69E-46 |
| MS.gene060932 | MS.gene92981 | 0.809276 | 2.05E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene92981 | 0.867673 | 1.15E-65 | -1.69E-46 |
| MS.gene060935 | MS.gene92981 | 0.911131 | 8.60E-83 | -1.69E-46 |
| MS.gene060937 | MS.gene92981 | 0.908654 | 1.35E-81 | -1.69E-46 |
| MS.gene061100 | MS.gene92981 | 0.844587 | 6.89E-59 | -1.69E-46 |
| MS.gene061135 | MS.gene92981 | 0.800367 | 1.49E-48 | -1.69E-46 |
| MS.gene061160 | MS.gene92981 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene061188 | MS.gene92981 | 0.82488 | 6.35E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92981.t1 | MTR_1g107575 | 95.833 | 768 | 29 | 2 | 1 | 766 | 1 | 767 | 0.0 | 1337 |
| MS.gene92981.t1 | MTR_4g126260 | 24.111 | 253 | 185 | 5 | 506 | 757 | 356 | 602 | 1.50e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92981.t1 | AT1G56290 | 51.650 | 788 | 260 | 18 | 1 | 763 | 1 | 692 | 0.0 | 735 |
| MS.gene92981.t1 | AT5G56900 | 27.237 | 257 | 168 | 8 | 506 | 757 | 258 | 500 | 4.70e-15 | 79.3 |
| MS.gene92981.t1 | AT5G56900 | 27.237 | 257 | 168 | 8 | 506 | 757 | 159 | 401 | 7.40e-15 | 77.8 |
| MS.gene92981.t1 | AT5G56900 | 27.237 | 257 | 168 | 8 | 506 | 757 | 351 | 593 | 9.03e-15 | 78.6 |
Find 172 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACCACTTCTTCTTTC+TGG | 0.127155 | 1.2:-80414557 | None:intergenic |
| AATGCAGAACAAGCAGTTTA+AGG | 0.165236 | 1.2:+80418591 | MS.gene92981:CDS |
| TAAATCTAGAAAATGCTTTC+TGG | 0.175819 | 1.2:+80414260 | None:intergenic |
| GATAATGAATCTTGCACTTT+AGG | 0.203429 | 1.2:-80417629 | None:intergenic |
| AGATGGCAGTGATGGTTCTT+TGG | 0.217013 | 1.2:+80414726 | MS.gene92981:CDS |
| AAAAGAGGCAACGTTCTTTC+TGG | 0.231869 | 1.2:-80418738 | None:intergenic |
| CTTTAGGTGCTTTCATTTCA+TGG | 0.232601 | 1.2:-80417613 | None:intergenic |
| CTATCCAACGGGATTCTAAA+AGG | 0.246272 | 1.2:+80417415 | MS.gene92981:CDS |
| TTCTATCGTCCTCCCTTGTT+GGG | 0.271017 | 1.2:+80416824 | MS.gene92981:CDS |
| AGCCTCTTTAGCAACATCTT+TGG | 0.273963 | 1.2:-80419534 | None:intergenic |
| TTAACTCCATCCCTTTCTTC+TGG | 0.275995 | 1.2:-80416784 | None:intergenic |
| CCAAATTCTACATGAAAATA+AGG | 0.288504 | 1.2:-80421209 | None:intergenic |
| GTCAAAATGATCCCAGTCTT+TGG | 0.291825 | 1.2:-80421396 | None:intergenic |
| GCCTCTTTAGCAACATCTTT+GGG | 0.302529 | 1.2:-80419533 | None:intergenic |
| ATCAGATATTAGGAGGAAAA+AGG | 0.309597 | 1.2:+80414465 | MS.gene92981:CDS |
| ACAAGATGCATCGGCCGATT+TGG | 0.310653 | 1.2:-80418772 | None:intergenic |
| TAACTCCGATGGCTCTGTTT+TGG | 0.313770 | 1.2:+80417781 | MS.gene92981:CDS |
| CTTCTATCGTCCTCCCTTGT+TGG | 0.323231 | 1.2:+80416823 | MS.gene92981:CDS |
| CGATATTGCAAGAAAAGAAA+TGG | 0.349250 | 1.2:+80414822 | MS.gene92981:CDS |
| ACTCGTATCAATGAGTCTTT+TGG | 0.351937 | 1.2:-80421150 | None:intergenic |
| CTGACCTTCTTAAAGTATAA+AGG | 0.363032 | 1.2:-80419557 | None:intergenic |
| AAATCTAGAAAATGCTTTCT+GGG | 0.367835 | 1.2:+80414261 | None:intergenic |
| TTAAATAAATTTGCTAATGA+TGG | 0.373787 | 1.2:+80417722 | MS.gene92981:CDS |
| GATGGCAGTGATGGTTCTTT+GGG | 0.376486 | 1.2:+80414727 | MS.gene92981:CDS |
| AAGGAGTTTAAGAGTAGTCT+TGG | 0.378970 | 1.2:+80421269 | MS.gene92981:CDS |
| TAACTCCATCCCTTTCTTCT+GGG | 0.389734 | 1.2:-80416783 | None:intergenic |
| CTTCCATCATCCTTTAGATA+AGG | 0.393080 | 1.2:-80416754 | None:intergenic |
| CATTAGAGGCATGCTGCATT+TGG | 0.401828 | 1.2:+80421301 | MS.gene92981:CDS |
| AGAAATTAAACTCACGTGAA+TGG | 0.401995 | 1.2:-80418872 | None:intergenic |
| CTTGGGTTGAATGTCATTAG+AGG | 0.406348 | 1.2:+80421287 | MS.gene92981:CDS |
| CAGTGGCAGCCCGTGGTGCC+TGG | 0.410325 | 1.2:+80418832 | MS.gene92981:CDS |
| CACCCTCAGCTACAGCAAAC+TGG | 0.415469 | 1.2:-80417670 | None:intergenic |
| GATATTGCCAGAGGAGGTTC+CGG | 0.417230 | 1.2:+80414903 | MS.gene92981:CDS |
| AAAGAGGCAACGTTCTTTCT+GGG | 0.420692 | 1.2:-80418737 | None:intergenic |
| AAGTGCAAGATTCATTATCT+TGG | 0.421374 | 1.2:+80417633 | MS.gene92981:CDS |
| CAAAAGTCATGTTCAAAAGA+TGG | 0.422563 | 1.2:+80414766 | MS.gene92981:CDS |
| GGAGAAAGGTGGGGTTCTCT+TGG | 0.424757 | 1.2:+80417276 | MS.gene92981:CDS |
| TCCTTTGTTTCTGAAACAGC+TGG | 0.426347 | 1.2:-80414880 | None:intergenic |
| GCCAGAGGAGGTTCCGGTTG+AGG | 0.427345 | 1.2:+80414909 | MS.gene92981:CDS |
| CTAAGACATACCTCCTCAAC+CGG | 0.430215 | 1.2:-80414922 | None:intergenic |
| GCATGGCCTTAGCTGCCAAC+TGG | 0.432433 | 1.2:-80417889 | None:intergenic |
| TCCTCAACCGGAACCTCCTC+TGG | 0.432540 | 1.2:-80414910 | None:intergenic |
| TAAAGCAGCTGCACCAGCTC+GGG | 0.436695 | 1.2:+80417323 | MS.gene92981:CDS |
| TGGATAGGCTTATCAGAATC+TGG | 0.438375 | 1.2:-80417399 | None:intergenic |
| TCTTCTTCAGATGGCAGTGA+TGG | 0.448835 | 1.2:+80414718 | MS.gene92981:CDS |
| GAAATTAAACTCACGTGAAT+GGG | 0.449576 | 1.2:-80418871 | None:intergenic |
| GGCTCCTTTATACTTTAAGA+AGG | 0.451038 | 1.2:+80419553 | MS.gene92981:CDS |
| TCGTCCTCCCTTGTTGGGGA+TGG | 0.451524 | 1.2:+80416829 | MS.gene92981:CDS |
| TTAGCAACATCTTTGGGTAC+AGG | 0.452375 | 1.2:-80419527 | None:intergenic |
| ATGAAAATAAGGAAAGTCCT+TGG | 0.453332 | 1.2:-80421198 | None:intergenic |
| TGCAAACCAGTTGGCAGCTA+AGG | 0.457599 | 1.2:+80417883 | MS.gene92981:CDS |
| AGATAAGGATTCAATTCCTT+AGG | 0.459784 | 1.2:-80416739 | None:intergenic |
| TTCTGATAAGCCTATCCAAC+GGG | 0.465145 | 1.2:+80417404 | MS.gene92981:CDS |
| ACCCAAAGATGTTGCTAAAG+AGG | 0.465690 | 1.2:+80419532 | MS.gene92981:CDS |
| TGCAAGAAAAGAAATGGGAT+TGG | 0.466865 | 1.2:+80414828 | MS.gene92981:CDS |
| AACTCTACAAACCTGGTCAC+GGG | 0.470379 | 1.2:-80414297 | None:intergenic |
| AGGGAAGTTCTAGTTCTAGA+AGG | 0.477096 | 1.2:+80418196 | MS.gene92981:CDS |
| TGAAGAAGCTGATAGACTAA+TGG | 0.482397 | 1.2:+80417934 | MS.gene92981:CDS |
| GAAAAGAAATGGGATTGGAT+TGG | 0.486728 | 1.2:+80414833 | MS.gene92981:CDS |
| CTAGGTACAAGATGGGAACT+TGG | 0.486887 | 1.2:+80414411 | MS.gene92981:intron |
| ACAGGTTGTGGGAGAAAGGT+GGG | 0.487868 | 1.2:+80417266 | MS.gene92981:intron |
| TGAAAATAAGGAAAGTCCTT+GGG | 0.489950 | 1.2:-80421197 | None:intergenic |
| TCACCAGGTATGTCTACATC+TGG | 0.490912 | 1.2:-80417830 | None:intergenic |
| TTTGTCTAGAAAATCCAAAT+CGG | 0.491417 | 1.2:+80418758 | MS.gene92981:CDS |
| AATCCTTATCTAAAGGATGA+TGG | 0.493135 | 1.2:+80416751 | MS.gene92981:CDS |
| AGGAGTTTAAGAGTAGTCTT+GGG | 0.500080 | 1.2:+80421270 | MS.gene92981:CDS |
| ACGGTCAAGGAGTGGTAAAA+AGG | 0.500765 | 1.2:+80414672 | MS.gene92981:CDS |
| ACATACAGGTTGTGGGAGAA+AGG | 0.505732 | 1.2:+80417262 | MS.gene92981:intron |
| GATATTGCAAGAAAAGAAAT+GGG | 0.506087 | 1.2:+80414823 | MS.gene92981:CDS |
| AAAAGTCATGTTCAAAAGAT+GGG | 0.506136 | 1.2:+80414767 | MS.gene92981:CDS |
| GGAATTGAATCCTTATCTAA+AGG | 0.506348 | 1.2:+80416744 | MS.gene92981:CDS |
| GAAATTCATTCCCCGTGACC+AGG | 0.508309 | 1.2:+80414286 | MS.gene92981:CDS |
| TGCTTAAGTCTGAAAGTAAG+AGG | 0.510249 | 1.2:+80414857 | MS.gene92981:CDS |
| TCTTGAAACTGTGATGGGAT+TGG | 0.510705 | 1.2:+80419469 | MS.gene92981:CDS |
| TCCTTTCAAACGAAGTTGCA+TGG | 0.513085 | 1.2:-80417906 | None:intergenic |
| TACAAGATGGGAACTTGGAT+AGG | 0.515554 | 1.2:+80414416 | MS.gene92981:CDS |
| GCCATGCAACTTCGTTTGAA+AGG | 0.516217 | 1.2:+80417905 | MS.gene92981:CDS |
| TCCTCCCTTGTTGGGGATGG+AGG | 0.516820 | 1.2:+80416832 | MS.gene92981:CDS |
| CTAAAGCAGCTGCACCAGCT+CGG | 0.518101 | 1.2:+80417322 | MS.gene92981:CDS |
| GAAGTGGTTACCCAGAAGAA+AGG | 0.519164 | 1.2:+80416773 | MS.gene92981:CDS |
| GCCTTCGTTTCTTATCATCC+CGG | 0.519609 | 1.2:-80414624 | None:intergenic |
| CCATGTTATTGATGATGAAA+AGG | 0.522343 | 1.2:+80421250 | MS.gene92981:CDS |
| TGTATATACTAGGTACAAGA+TGG | 0.525351 | 1.2:+80414403 | MS.gene92981:intron |
| GCCAGCTGTTTCAGAAACAA+AGG | 0.526710 | 1.2:+80414879 | MS.gene92981:CDS |
| ATATCTTCTGAGCAGAAGAA+AGG | 0.527325 | 1.2:+80418532 | MS.gene92981:CDS |
| GCAGTTTAAGGTTTATACTC+AGG | 0.528525 | 1.2:+80418603 | MS.gene92981:CDS |
| ACGTCAAAGGTACGAGAAAG+TGG | 0.530885 | 1.2:+80421343 | MS.gene92981:CDS |
| TATCCAACGGGATTCTAAAA+GGG | 0.536857 | 1.2:+80417416 | MS.gene92981:CDS |
| CAACTGAAAGTGAAAGCGAC+CGG | 0.538228 | 1.2:+80414605 | MS.gene92981:CDS |
| GTCAAAGAAGGCAAATCCTA+AGG | 0.538930 | 1.2:+80416723 | MS.gene92981:intron |
| GTAGAATTTGGTCTAAACAA+AGG | 0.541254 | 1.2:+80421221 | MS.gene92981:CDS |
| GAAGACTCTTCTTCTTCAGA+TGG | 0.541678 | 1.2:+80414709 | MS.gene92981:CDS |
| GCAGCAACGGAGGCATTGCA+TGG | 0.542294 | 1.2:+80419493 | MS.gene92981:CDS |
| CAGCAATGACCAGGCACCAC+GGG | 0.542710 | 1.2:-80418841 | None:intergenic |
| TGATGGGATTGGCGCAGCAA+CGG | 0.543497 | 1.2:+80419480 | MS.gene92981:CDS |
| CTCATTGATACGAGTCAGAA+GGG | 0.552831 | 1.2:+80421158 | MS.gene92981:CDS |
| TATGGATACATACAGGTTGT+GGG | 0.553648 | 1.2:+80417255 | MS.gene92981:intron |
| AGGCATGCTGCATTTGGCTG+AGG | 0.559862 | 1.2:+80421307 | MS.gene92981:CDS |
| TAACTCTACAAACCTGGTCA+CGG | 0.560136 | 1.2:-80414298 | None:intergenic |
| AAGTGGTTACCCAGAAGAAA+GGG | 0.560758 | 1.2:+80416774 | MS.gene92981:CDS |
| TATCTAAAGGATGATGGAAG+TGG | 0.562789 | 1.2:+80416757 | MS.gene92981:CDS |
| TCTATCGTCCTCCCTTGTTG+GGG | 0.563715 | 1.2:+80416825 | MS.gene92981:CDS |
| GAAATTAGATCAAGAACTGA+GGG | 0.565433 | 1.2:+80418177 | MS.gene92981:CDS |
| TGATAAGAAACGAAGGCGGA+AGG | 0.566477 | 1.2:+80414630 | MS.gene92981:CDS |
| TATGCGTGAGTTAGTTAGCA+AGG | 0.567223 | 1.2:+80417751 | MS.gene92981:CDS |
| GATGAATATGACTTTGAGAC+TGG | 0.570613 | 1.2:+80418631 | MS.gene92981:CDS |
| ATGGTTCTTTGGGTCGCCAA+CGG | 0.574425 | 1.2:+80414737 | MS.gene92981:CDS |
| AAGATATGTGAAATTTGCAA+TGG | 0.574800 | 1.2:-80418800 | None:intergenic |
| ACAAGATGGGAACTTGGATA+GGG | 0.579294 | 1.2:+80414417 | MS.gene92981:CDS |
| TTGCTCCTCCATCCCCAACA+AGG | 0.579676 | 1.2:-80416837 | None:intergenic |
| GCATGTAGATGAGCCCGAGC+TGG | 0.580752 | 1.2:-80417336 | None:intergenic |
| TACAGGTTGTGGGAGAAAGG+TGG | 0.581114 | 1.2:+80417265 | MS.gene92981:intron |
| AGTGTTTCTTGAAACTGTGA+TGG | 0.581708 | 1.2:+80419463 | MS.gene92981:CDS |
| AACTGAAAGTGAAAGCGACC+GGG | 0.581958 | 1.2:+80414606 | MS.gene92981:CDS |
| CTATAAGAAGCAGACAAAGA+GGG | 0.582737 | 1.2:+80417358 | MS.gene92981:CDS |
| AAGCCAGTTTGCTGTAGCTG+AGG | 0.582994 | 1.2:+80417667 | MS.gene92981:CDS |
| TTGGGGATGGAGGAGCAAGT+TGG | 0.583549 | 1.2:+80416842 | MS.gene92981:CDS |
| AGAAAAGAGATGGACGGTCA+AGG | 0.584062 | 1.2:+80414659 | MS.gene92981:CDS |
| TGGGATTGGCGCAGCAACGG+AGG | 0.587679 | 1.2:+80419483 | MS.gene92981:CDS |
| TTGGTGGGCAGGAAGAAGCA+AGG | 0.587839 | 1.2:+80418121 | MS.gene92981:intron |
| TTGATGAAGCAGAAGATGAG+TGG | 0.593008 | 1.2:+80421114 | MS.gene92981:CDS |
| ACTCATTGATACGAGTCAGA+AGG | 0.593762 | 1.2:+80421157 | MS.gene92981:CDS |
| ACTTTCCAAAACAGAGCCAT+CGG | 0.600722 | 1.2:-80417786 | None:intergenic |
| TGGTGGGCAGGAAGAAGCAA+GGG | 0.600781 | 1.2:+80418122 | MS.gene92981:intron |
| GCTATAAGAAGCAGACAAAG+AGG | 0.602039 | 1.2:+80417357 | MS.gene92981:CDS |
| AGCCAGTTTGCTGTAGCTGA+GGG | 0.602459 | 1.2:+80417668 | MS.gene92981:CDS |
| AGCGGAGAGAACAAGATCAA+AGG | 0.603131 | 1.2:+80414790 | MS.gene92981:CDS |
| AACGGTGGATGATAATGTGT+GGG | 0.603348 | 1.2:+80419379 | MS.gene92981:CDS |
| AAGGGTCCAGAAAGAAGAAG+TGG | 0.604306 | 1.2:+80414551 | MS.gene92981:CDS |
| GATAAGAAACGAAGGCGGAA+GGG | 0.605462 | 1.2:+80414631 | MS.gene92981:CDS |
| TGCTCCTCCATCCCCAACAA+GGG | 0.605665 | 1.2:-80416836 | None:intergenic |
| CAAGAGCAAGCAGCTCGAGA+AGG | 0.610525 | 1.2:+80416889 | MS.gene92981:CDS |
| TGAAATTAGATCAAGAACTG+AGG | 0.611462 | 1.2:+80418176 | MS.gene92981:CDS |
| TCATGTTCAAAAGATGGGAG+CGG | 0.612238 | 1.2:+80414772 | MS.gene92981:CDS |
| ATGGACACAACAAGATGCAT+CGG | 0.612414 | 1.2:-80418781 | None:intergenic |
| TAACATGAGTGCAAACCAGT+TGG | 0.614285 | 1.2:+80417874 | MS.gene92981:CDS |
| TCTCCAGATGTAGACATACC+TGG | 0.614683 | 1.2:+80417827 | MS.gene92981:CDS |
| AATCTAGAAAATGCTTTCTG+GGG | 0.620178 | 1.2:+80414262 | None:intergenic |
| ATTCAAGGTATGCTATGCAG+AGG | 0.622462 | 1.2:+80418509 | MS.gene92981:intron |
| AGAGGAGGTTCCGGTTGAGG+AGG | 0.624945 | 1.2:+80414912 | MS.gene92981:CDS |
| GCTTTCATTTCATGGTGCCG+AGG | 0.628763 | 1.2:-80417605 | None:intergenic |
| CATATCTTATGTTGCCACAG+TGG | 0.629694 | 1.2:+80418815 | MS.gene92981:CDS |
| GGCACCACGGGCTGCCACTG+TGG | 0.630244 | 1.2:-80418829 | None:intergenic |
| GTATATACTAGGTACAAGAT+GGG | 0.630548 | 1.2:+80414404 | MS.gene92981:intron |
| GTGTTTCTTGAAACTGTGAT+GGG | 0.635016 | 1.2:+80419464 | MS.gene92981:CDS |
| GTTTAAGGTTTATACTCAGG+CGG | 0.637491 | 1.2:+80418606 | MS.gene92981:CDS |
| TTTACGCAACTCAATTCCCA+AGG | 0.639849 | 1.2:+80421181 | MS.gene92981:CDS |
| TATAAGAAGCAGACAAAGAG+GGG | 0.639918 | 1.2:+80417359 | MS.gene92981:CDS |
| GTTGCCACAGTGGCAGCCCG+TGG | 0.646274 | 1.2:+80418825 | MS.gene92981:CDS |
| TCCTCCATCCCCAACAAGGG+AGG | 0.647544 | 1.2:-80416833 | None:intergenic |
| ACTCTACAAACCTGGTCACG+GGG | 0.649268 | 1.2:-80414296 | None:intergenic |
| GGTTACCCAGAAGAAAGGGA+TGG | 0.651690 | 1.2:+80416778 | MS.gene92981:CDS |
| GCATGAATCAGCTACAAGAA+CGG | 0.655856 | 1.2:+80419361 | MS.gene92981:intron |
| GAAAGGGATGGAGTTAACGT+TGG | 0.656584 | 1.2:+80416790 | MS.gene92981:CDS |
| AAAGGAGATATTGCCAGAGG+AGG | 0.656762 | 1.2:+80414897 | MS.gene92981:CDS |
| AGAGATGGACGGTCAAGGAG+TGG | 0.659421 | 1.2:+80414664 | MS.gene92981:CDS |
| AAGGAGAGTAGTAACTCCGA+TGG | 0.660069 | 1.2:+80417770 | MS.gene92981:CDS |
| GGTAAAATACAGCAATGACC+AGG | 0.660836 | 1.2:-80418850 | None:intergenic |
| ATTCTGATAAGCCTATCCAA+CGG | 0.661452 | 1.2:+80417403 | MS.gene92981:CDS |
| TTCTGAGCAGAAGAAAGGAG+AGG | 0.665761 | 1.2:+80418537 | MS.gene92981:CDS |
| AAGACATGTATAGACGTCAA+AGG | 0.668527 | 1.2:+80421330 | MS.gene92981:CDS |
| CAGGTTGTGGGAGAAAGGTG+GGG | 0.669459 | 1.2:+80417267 | MS.gene92981:intron |
| ACAGCAATGACCAGGCACCA+CGG | 0.673584 | 1.2:-80418842 | None:intergenic |
| AACAAAGGAGATATTGCCAG+AGG | 0.685554 | 1.2:+80414894 | MS.gene92981:CDS |
| TGAATCAGCTACAAGAACGG+TGG | 0.687115 | 1.2:+80419364 | MS.gene92981:CDS |
| ACCGGGATGATAAGAAACGA+AGG | 0.693258 | 1.2:+80414623 | MS.gene92981:CDS |
| AGAAGGACGAAGCTGCCAAG+AGG | 0.694798 | 1.2:+80416906 | MS.gene92981:CDS |
| AAGAGTAGAAAGAAGCAAGG+AGG | 0.698813 | 1.2:+80418664 | MS.gene92981:CDS |
| GAACGGTGGATGATAATGTG+TGG | 0.714664 | 1.2:+80419378 | MS.gene92981:CDS |
| ACGGTGGATGATAATGTGTG+GGG | 0.723750 | 1.2:+80419380 | MS.gene92981:CDS |
| TCAAAGGTACGAGAAAGTGG+AGG | 0.744298 | 1.2:+80421346 | MS.gene92981:CDS |
| GGGATGATAAGAAACGAAGG+CGG | 0.769963 | 1.2:+80414626 | MS.gene92981:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 80414272 | 80421448 | 80414272 | ID=MS.gene92981 |
| chr1.2 | mRNA | 80414272 | 80421448 | 80414272 | ID=MS.gene92981.t1;Parent=MS.gene92981 |
| chr1.2 | exon | 80414272 | 80414307 | 80414272 | ID=MS.gene92981.t1.exon1;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80414272 | 80414307 | 80414272 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80414415 | 80414933 | 80414415 | ID=MS.gene92981.t1.exon2;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80414415 | 80414933 | 80414415 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80416724 | 80416927 | 80416724 | ID=MS.gene92981.t1.exon3;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80416724 | 80416927 | 80416724 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80417270 | 80417437 | 80417270 | ID=MS.gene92981.t1.exon4;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80417270 | 80417437 | 80417270 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80417584 | 80417955 | 80417584 | ID=MS.gene92981.t1.exon5;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80417584 | 80417955 | 80417584 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80418132 | 80418217 | 80418132 | ID=MS.gene92981.t1.exon6;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80418132 | 80418217 | 80418132 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80418516 | 80418879 | 80418516 | ID=MS.gene92981.t1.exon7;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80418516 | 80418879 | 80418516 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80419362 | 80419574 | 80419362 | ID=MS.gene92981.t1.exon8;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80419362 | 80419574 | 80419362 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| chr1.2 | exon | 80421110 | 80421448 | 80421110 | ID=MS.gene92981.t1.exon9;Parent=MS.gene92981.t1 |
| chr1.2 | CDS | 80421110 | 80421448 | 80421110 | ID=cds.MS.gene92981.t1;Parent=MS.gene92981.t1 |
| Gene Sequence |
| Protein sequence |
